View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4711-Insertion-7 (Length: 452)

Name: NF4711-Insertion-7
Description: NF4711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4711-Insertion-7
NF4711-Insertion-7
[»] chr4 (83 HSPs)
chr4 (7-205)||(48911227-48911426)
chr4 (316-452)||(22321408-22321544)
chr4 (316-452)||(24706388-24706524)
chr4 (316-452)||(25704651-25704787)
chr4 (316-452)||(44568837-44568973)
chr4 (316-450)||(21310425-21310559)
chr4 (316-452)||(12071561-12071697)
chr4 (316-452)||(14261044-14261180)
chr4 (316-452)||(34324723-34324860)
chr4 (316-452)||(40122626-40122762)
chr4 (311-452)||(21661676-21661817)
chr4 (311-452)||(21670440-21670581)
chr4 (316-452)||(50767864-50768000)
chr4 (313-448)||(20249158-20249292)
chr4 (318-444)||(31892240-31892362)
chr4 (219-319)||(12624656-12624758)
chr4 (316-431)||(1988036-1988150)
chr4 (218-318)||(26203089-26203191)
chr4 (313-444)||(26676715-26676846)
chr4 (364-444)||(20714497-20714577)
chr4 (218-319)||(31486446-31486550)
chr4 (316-444)||(6129097-6129225)
chr4 (218-319)||(20291299-20291402)
chr4 (341-444)||(19692748-19692851)
chr4 (341-444)||(19703333-19703436)
chr4 (248-318)||(25477216-25477286)
chr4 (246-316)||(28116551-28116621)
chr4 (242-318)||(14602699-14602775)
chr4 (243-318)||(22651450-22651525)
chr4 (247-318)||(37175066-37175136)
chr4 (246-317)||(38136344-38136415)
chr4 (244-318)||(29584881-29584955)
chr4 (367-452)||(32543532-32543616)
chr4 (213-318)||(13096586-13096692)
chr4 (247-318)||(34543692-34543763)
chr4 (248-318)||(20262438-20262508)
chr4 (244-317)||(3684233-3684306)
chr4 (246-318)||(5416913-5416983)
chr4 (253-318)||(19654424-19654489)
chr4 (246-318)||(30153266-30153338)
chr4 (253-317)||(52226015-52226079)
chr4 (219-318)||(7002142-7002244)
chr4 (376-439)||(34284171-34284234)
chr4 (252-319)||(37625168-37625235)
chr4 (252-318)||(3094177-3094243)
chr4 (245-303)||(30049419-30049477)
chr4 (253-318)||(48472539-48472605)
chr4 (245-319)||(20293731-20293809)
chr4 (253-318)||(33246541-33246606)
chr4 (253-318)||(39237633-39237698)
chr4 (253-318)||(41920082-41920147)
chr4 (253-318)||(46729302-46729366)
chr4 (364-401)||(48652268-48652305)
chr4 (253-318)||(50782774-50782839)
chr4 (253-318)||(51787767-51787832)
chr4 (253-318)||(56373388-56373453)
chr4 (252-319)||(10602249-10602317)
chr4 (246-298)||(52198792-52198844)
chr4 (219-318)||(22750886-22750987)
chr4 (217-292)||(54701357-54701434)
chr4 (252-317)||(5932882-5932946)
chr4 (253-318)||(16070427-16070492)
chr4 (241-281)||(754502-754542)
chr4 (219-295)||(20185723-20185802)
chr4 (253-317)||(24072763-24072827)
chr4 (218-295)||(32866463-32866542)
chr4 (242-281)||(722377-722416)
chr4 (371-426)||(18507430-18507484)
chr4 (252-318)||(20016520-20016584)
chr4 (259-318)||(20791929-20791988)
chr4 (248-283)||(56217102-56217137)
chr4 (253-303)||(5536493-5536543)
chr4 (331-369)||(19361662-19361700)
chr4 (251-317)||(39414230-39414296)
chr4 (253-318)||(45628118-45628184)
chr4 (251-317)||(52977551-52977616)
chr4 (311-344)||(19433353-19433386)
chr4 (253-318)||(41945817-41945881)
chr4 (263-307)||(33392541-33392585)
chr4 (253-317)||(45079856-45079920)
chr4 (254-318)||(52552555-52552619)
chr4 (266-314)||(54359693-54359741)
chr4 (312-344)||(55209808-55209840)
[»] chr7 (66 HSPs)
chr7 (316-452)||(40348960-40349096)
chr7 (316-452)||(10981508-10981644)
chr7 (316-452)||(27813811-27813947)
chr7 (318-452)||(36453265-36453399)
chr7 (314-452)||(47110449-47110585)
chr7 (314-452)||(25614494-25614630)
chr7 (218-319)||(23875996-23876099)
chr7 (247-319)||(26632836-26632908)
chr7 (223-318)||(37491663-37491760)
chr7 (364-444)||(3091565-3091645)
chr7 (218-317)||(20123409-20123510)
chr7 (215-305)||(20124144-20124236)
chr7 (216-318)||(29636084-29636188)
chr7 (242-318)||(48193600-48193676)
chr7 (366-448)||(16662146-16662226)
chr7 (366-448)||(17636506-17636586)
chr7 (316-444)||(16360384-16360510)
chr7 (364-444)||(7743546-7743625)
chr7 (219-318)||(40740911-40741011)
chr7 (339-444)||(37983179-37983280)
chr7 (219-319)||(6376176-6376273)
chr7 (253-319)||(18122085-18122151)
chr7 (253-318)||(4089544-4089609)
chr7 (253-318)||(19236111-19236176)
chr7 (246-319)||(21388231-21388304)
chr7 (316-369)||(25060133-25060186)
chr7 (253-318)||(46783885-46783950)
chr7 (376-444)||(27942188-27942256)
chr7 (247-319)||(31373741-31373813)
chr7 (323-448)||(8379949-8380076)
chr7 (251-318)||(10685079-10685146)
chr7 (252-318)||(19477460-19477525)
chr7 (253-319)||(27213483-27213549)
chr7 (248-318)||(48767555-48767625)
chr7 (253-318)||(2276621-2276686)
chr7 (316-369)||(2911548-2911601)
chr7 (253-318)||(25750364-25750429)
chr7 (261-314)||(29992979-29993032)
chr7 (253-318)||(36116317-36116382)
chr7 (364-452)||(3498895-3498983)
chr7 (246-317)||(21753433-21753502)
chr7 (253-317)||(37673733-37673797)
chr7 (252-319)||(21801099-21801166)
chr7 (253-319)||(21809690-21809756)
chr7 (218-317)||(28663715-28663815)
chr7 (248-318)||(48610180-48610250)
chr7 (407-448)||(28200298-28200339)
chr7 (252-313)||(37048030-37048091)
chr7 (253-318)||(40211321-40211386)
chr7 (253-318)||(40263707-40263772)
chr7 (252-317)||(42993233-42993298)
chr7 (266-318)||(5334439-5334491)
chr7 (313-401)||(24456927-24457015)
chr7 (222-317)||(26201013-26201111)
chr7 (247-318)||(33181285-33181356)
chr7 (269-316)||(44648763-44648810)
chr7 (247-313)||(10595146-10595212)
chr7 (244-318)||(21752515-21752589)
chr7 (271-317)||(42983659-42983705)
chr7 (248-318)||(49100662-49100732)
chr7 (248-313)||(1324699-1324764)
chr7 (316-357)||(2910859-2910900)
chr7 (253-317)||(35128382-35128444)
chr7 (259-323)||(36195393-36195457)
chr7 (267-303)||(41672626-41672662)
chr7 (253-305)||(46688530-46688581)
[»] chr5 (59 HSPs)
chr5 (316-452)||(25773649-25773785)
chr5 (316-452)||(12806994-12807130)
chr5 (313-452)||(30720633-30720772)
chr5 (316-452)||(40886751-40886887)
chr5 (316-452)||(10285198-10285334)
chr5 (311-452)||(36561240-36561381)
chr5 (316-444)||(37900773-37900901)
chr5 (218-319)||(39690528-39690631)
chr5 (327-444)||(7277571-7277688)
chr5 (223-319)||(27642467-27642564)
chr5 (219-317)||(21912081-21912180)
chr5 (354-448)||(25683373-25683467)
chr5 (316-450)||(16983258-16983393)
chr5 (323-444)||(734487-734607)
chr5 (316-444)||(39070883-39071011)
chr5 (316-441)||(23098386-23098503)
chr5 (323-444)||(11319566-11319687)
chr5 (364-452)||(30403102-30403191)
chr5 (245-318)||(43060553-43060626)
chr5 (218-318)||(38972170-38972271)
chr5 (253-318)||(21574923-21574988)
chr5 (246-318)||(30348120-30348192)
chr5 (216-318)||(3559070-3559172)
chr5 (244-319)||(27587825-27587900)
chr5 (248-319)||(4857536-4857611)
chr5 (253-319)||(11980712-11980778)
chr5 (251-317)||(14044542-14044608)
chr5 (218-318)||(10523317-10523418)
chr5 (219-317)||(15898507-15898606)
chr5 (242-318)||(7510591-7510667)
chr5 (244-319)||(35569047-35569122)
chr5 (248-318)||(3247317-3247387)
chr5 (248-318)||(10933997-10934067)
chr5 (367-448)||(16054165-16054244)
chr5 (316-365)||(15305216-15305265)
chr5 (252-317)||(18729583-18729648)
chr5 (242-315)||(25690735-25690808)
chr5 (253-318)||(29866185-29866250)
chr5 (212-318)||(32067781-32067889)
chr5 (253-318)||(36177288-36177353)
chr5 (316-424)||(11796451-11796559)
chr5 (247-293)||(4378132-4378178)
chr5 (248-318)||(34877657-34877727)
chr5 (367-444)||(1056431-1056507)
chr5 (244-317)||(16969361-16969434)
chr5 (248-317)||(20946078-20946147)
chr5 (242-298)||(20976353-20976409)
chr5 (117-173)||(31742730-31742786)
chr5 (244-318)||(4745113-4745188)
chr5 (251-318)||(15967155-15967222)
chr5 (241-319)||(33862857-33862935)
chr5 (254-317)||(41521185-41521248)
chr5 (256-309)||(555555-555608)
chr5 (253-318)||(25017717-25017782)
chr5 (253-318)||(31642512-31642576)
chr5 (261-317)||(600769-600825)
chr5 (247-318)||(10656582-10656651)
chr5 (253-317)||(27798152-27798216)
chr5 (261-317)||(43453986-43454042)
[»] chr1 (95 HSPs)
chr1 (313-452)||(23045420-23045559)
chr1 (316-452)||(40783798-40783934)
chr1 (313-451)||(284330-284468)
chr1 (315-452)||(321625-321762)
chr1 (315-448)||(24772050-24772183)
chr1 (311-452)||(47037993-47038132)
chr1 (317-448)||(27211109-27211240)
chr1 (323-440)||(46771644-46771761)
chr1 (316-444)||(23526240-23526368)
chr1 (336-448)||(33082765-33082877)
chr1 (218-319)||(15512823-15512926)
chr1 (218-319)||(28949006-28949109)
chr1 (314-448)||(1749305-1749439)
chr1 (219-318)||(31305277-31305378)
chr1 (331-444)||(52037271-52037382)
chr1 (312-444)||(51064902-51065037)
chr1 (218-318)||(44335248-44335349)
chr1 (367-447)||(1837975-1838053)
chr1 (243-318)||(2342889-2342964)
chr1 (217-317)||(23982636-23982738)
chr1 (219-318)||(4813505-4813606)
chr1 (251-317)||(38680468-38680534)
chr1 (217-319)||(8984703-8984807)
chr1 (247-318)||(30898606-30898677)
chr1 (364-438)||(3657125-3657199)
chr1 (244-318)||(13723521-13723595)
chr1 (219-318)||(15179369-15179470)
chr1 (248-318)||(30336049-30336119)
chr1 (364-444)||(31003935-31004012)
chr1 (316-444)||(40261420-40261549)
chr1 (258-318)||(15911595-15911655)
chr1 (258-318)||(28723696-28723756)
chr1 (218-318)||(51996912-51997015)
chr1 (375-450)||(7765072-7765147)
chr1 (247-318)||(20564764-20564835)
chr1 (314-369)||(41959076-41959131)
chr1 (248-318)||(5085132-5085202)
chr1 (216-319)||(27531055-27531160)
chr1 (248-318)||(32047432-32047502)
chr1 (316-369)||(3943060-3943113)
chr1 (316-369)||(9588670-9588723)
chr1 (316-369)||(13984991-13985044)
chr1 (253-318)||(16582528-16582593)
chr1 (253-318)||(25269372-25269437)
chr1 (253-318)||(32152153-32152218)
chr1 (364-444)||(52478016-52478094)
chr1 (254-318)||(31808015-31808079)
chr1 (219-317)||(52141219-52141321)
chr1 (366-444)||(27143160-27143239)
chr1 (251-318)||(48721911-48721978)
chr1 (248-318)||(3143393-3143463)
chr1 (248-318)||(33231830-33231900)
chr1 (253-318)||(25258325-25258390)
chr1 (253-318)||(34696926-34696991)
chr1 (376-441)||(40562733-40562797)
chr1 (220-318)||(50692369-50692469)
chr1 (265-317)||(3072146-3072198)
chr1 (218-303)||(10842287-10842374)
chr1 (254-318)||(44395531-44395595)
chr1 (247-318)||(32144300-32144371)
chr1 (315-444)||(34458872-34459000)
chr1 (247-318)||(41737114-41737185)
chr1 (221-317)||(46495270-46495368)
chr1 (370-424)||(18396749-18396803)
chr1 (253-303)||(28334273-28334323)
chr1 (247-317)||(35366028-35366098)
chr1 (252-318)||(47754685-47754751)
chr1 (324-369)||(1168369-1168414)
chr1 (316-357)||(44227848-44227889)
chr1 (253-317)||(6282469-6282533)
chr1 (253-317)||(28679865-28679928)
chr1 (384-444)||(31061603-31061662)
chr1 (309-357)||(41959809-41959857)
chr1 (278-318)||(47071004-47071044)
chr1 (244-296)||(47643529-47643580)
chr1 (364-399)||(14351954-14351989)
chr1 (252-303)||(23393570-23393621)
chr1 (253-316)||(29302494-29302557)
chr1 (253-303)||(3143792-3143842)
chr1 (242-296)||(4817969-4818023)
chr1 (242-296)||(4829769-4829823)
chr1 (248-298)||(10160709-10160759)
chr1 (248-318)||(29140697-29140767)
chr1 (255-317)||(40261592-40261654)
chr1 (327-369)||(44228228-44228270)
chr1 (316-357)||(3943763-3943804)
chr1 (256-317)||(13352832-13352893)
chr1 (266-319)||(13698596-13698649)
chr1 (261-318)||(16395591-16395648)
chr1 (316-444)||(25929114-25929240)
chr1 (253-286)||(35001345-35001378)
chr1 (252-317)||(44163226-44163291)
chr1 (253-317)||(36084965-36085029)
chr1 (330-382)||(40564241-40564293)
chr1 (257-318)||(43189102-43189165)
[»] chr6 (52 HSPs)
chr6 (315-452)||(8626481-8626618)
chr6 (316-452)||(1605579-1605715)
chr6 (316-452)||(29260192-29260328)
chr6 (323-452)||(30734624-30734753)
chr6 (323-452)||(13757215-13757344)
chr6 (316-452)||(7761301-7761435)
chr6 (331-450)||(31559879-31559998)
chr6 (316-444)||(15064843-15064971)
chr6 (331-444)||(8235639-8235752)
chr6 (323-431)||(30734772-30734878)
chr6 (218-319)||(19838890-19838993)
chr6 (314-452)||(4129433-4129563)
chr6 (316-452)||(17942443-17942581)
chr6 (219-318)||(22410888-22410988)
chr6 (219-318)||(15981754-15981855)
chr6 (245-318)||(31945957-31946030)
chr6 (367-438)||(21277589-21277659)
chr6 (247-319)||(1763803-1763875)
chr6 (364-444)||(3798151-3798231)
chr6 (254-318)||(3887987-3888051)
chr6 (219-318)||(16327083-16327184)
chr6 (219-318)||(16350481-16350582)
chr6 (253-318)||(11302851-11302916)
chr6 (367-443)||(11370635-11370711)
chr6 (316-452)||(14286989-14287124)
chr6 (246-318)||(28238359-28238431)
chr6 (253-317)||(31536008-31536072)
chr6 (252-318)||(3729384-3729450)
chr6 (253-319)||(9461289-9461355)
chr6 (316-401)||(1814595-1814680)
chr6 (253-318)||(5895727-5895792)
chr6 (253-318)||(12514630-12514695)
chr6 (316-369)||(19996715-19996768)
chr6 (253-313)||(16186569-16186629)
chr6 (253-318)||(4250703-4250768)
chr6 (252-305)||(5604535-5604588)
chr6 (219-317)||(9428127-9428227)
chr6 (241-318)||(10669319-10669396)
chr6 (345-448)||(26860798-26860897)
chr6 (232-317)||(31487407-31487492)
chr6 (242-298)||(27441763-27441819)
chr6 (371-407)||(33845469-33845505)
chr6 (254-292)||(5084612-5084650)
chr6 (242-296)||(6791363-6791417)
chr6 (253-303)||(11081892-11081942)
chr6 (256-318)||(30248563-30248624)
chr6 (253-319)||(31780120-31780186)
chr6 (255-317)||(33758062-33758124)
chr6 (253-318)||(1514273-1514337)
chr6 (316-357)||(19996322-19996363)
chr6 (253-317)||(8644842-8644906)
chr6 (316-344)||(32672050-32672078)
[»] chr8 (83 HSPs)
chr8 (316-452)||(7146913-7147049)
chr8 (323-452)||(2540072-2540201)
chr8 (315-452)||(37345570-37345707)
chr8 (316-452)||(11174364-11174500)
chr8 (316-452)||(40058444-40058580)
chr8 (316-451)||(3585451-3585586)
chr8 (316-451)||(11646467-11646602)
chr8 (315-452)||(43275540-43275675)
chr8 (323-452)||(30999664-30999791)
chr8 (316-452)||(40918872-40919006)
chr8 (314-451)||(36068078-36068215)
chr8 (314-444)||(27034995-27035124)
chr8 (219-319)||(43980627-43980727)
chr8 (219-319)||(24962409-24962510)
chr8 (314-444)||(20546438-20546566)
chr8 (323-444)||(28562428-28562550)
chr8 (318-448)||(35866616-35866746)
chr8 (218-318)||(26878773-26878875)
chr8 (370-444)||(13881103-13881178)
chr8 (241-315)||(22590359-22590433)
chr8 (219-318)||(31746450-31746551)
chr8 (253-318)||(14577697-14577762)
chr8 (216-301)||(24276617-24276704)
chr8 (217-317)||(34882628-34882730)
chr8 (244-318)||(2562775-2562849)
chr8 (364-444)||(28326806-28326883)
chr8 (323-428)||(28567926-28568032)
chr8 (323-428)||(28575519-28575625)
chr8 (315-369)||(40486453-40486507)
chr8 (311-369)||(45278701-45278759)
chr8 (242-319)||(40602085-40602162)
chr8 (241-317)||(7172203-7172279)
chr8 (253-317)||(25888591-25888655)
chr8 (248-315)||(16644084-16644151)
chr8 (316-369)||(8697898-8697951)
chr8 (253-318)||(37956117-37956182)
chr8 (316-369)||(41307961-41308014)
chr8 (216-319)||(45283826-45283930)
chr8 (256-319)||(3006825-3006888)
chr8 (216-318)||(14906559-14906662)
chr8 (251-318)||(31673591-31673657)
chr8 (252-319)||(43191521-43191588)
chr8 (252-318)||(57233-57299)
chr8 (323-369)||(10646599-10646645)
chr8 (248-318)||(25185021-25185091)
chr8 (248-318)||(25198280-25198350)
chr8 (370-448)||(39151460-39151537)
chr8 (253-318)||(14522649-14522714)
chr8 (261-318)||(14739433-14739490)
chr8 (252-317)||(43182528-43182593)
chr8 (246-286)||(885451-885491)
chr8 (253-317)||(24512213-24512277)
chr8 (266-318)||(30262583-30262635)
chr8 (364-452)||(37510314-37510402)
chr8 (253-317)||(38761404-38761468)
chr8 (215-318)||(40517699-40517801)
chr8 (253-316)||(4273955-4274018)
chr8 (252-318)||(1177201-1177266)
chr8 (247-297)||(15702248-15702298)
chr8 (248-318)||(37141717-37141787)
chr8 (219-298)||(40790749-40790830)
chr8 (244-318)||(45203746-45203819)
chr8 (253-318)||(7772508-7772573)
chr8 (366-444)||(30906837-30906917)
chr8 (253-318)||(38770232-38770297)
chr8 (253-317)||(16002769-16002833)
chr8 (215-312)||(17933661-17933759)
chr8 (314-409)||(26629193-26629289)
chr8 (246-318)||(36437490-36437562)
chr8 (247-318)||(5191594-5191664)
chr8 (252-318)||(14846966-14847032)
chr8 (375-444)||(10181006-10181074)
chr8 (253-294)||(10396297-10396338)
chr8 (312-341)||(24524096-24524125)
chr8 (367-444)||(27564000-27564075)
chr8 (253-314)||(37600937-37600998)
chr8 (253-318)||(40337236-40337301)
chr8 (244-317)||(44255441-44255513)
chr8 (255-319)||(7727392-7727456)
chr8 (271-319)||(12762856-12762904)
chr8 (316-344)||(13217255-13217283)
chr8 (281-317)||(35709145-35709181)
chr8 (253-317)||(45185313-45185377)
[»] scaffold1431 (1 HSPs)
scaffold1431 (323-452)||(40-169)
[»] chr3 (90 HSPs)
chr3 (316-452)||(13364843-13364979)
chr3 (312-452)||(46694251-46694391)
chr3 (313-452)||(198852-198991)
chr3 (315-452)||(23088072-23088209)
chr3 (316-452)||(3383076-3383212)
chr3 (316-451)||(19241810-19241945)
chr3 (315-452)||(36881281-36881416)
chr3 (316-444)||(29375138-29375266)
chr3 (316-444)||(43750137-43750265)
chr3 (323-420)||(32835129-32835226)
chr3 (316-437)||(13702769-13702890)
chr3 (316-394)||(27707363-27707441)
chr3 (219-318)||(46435776-46435877)
chr3 (247-318)||(14645935-14646006)
chr3 (218-318)||(20945346-20945448)
chr3 (316-401)||(37293437-37293522)
chr3 (223-319)||(51263046-51263143)
chr3 (368-444)||(19897076-19897152)
chr3 (247-318)||(11388110-11388181)
chr3 (218-318)||(44338040-44338141)
chr3 (246-317)||(52325550-52325621)
chr3 (244-318)||(26517261-26517335)
chr3 (252-318)||(29645352-29645418)
chr3 (226-317)||(31531472-31531565)
chr3 (367-444)||(37780988-37781065)
chr3 (254-318)||(41825183-41825247)
chr3 (247-318)||(11344547-11344618)
chr3 (218-318)||(29676785-29676887)
chr3 (252-314)||(11393916-11393978)
chr3 (244-318)||(25750513-25750587)
chr3 (248-318)||(30476031-30476101)
chr3 (244-318)||(31650711-31650785)
chr3 (247-317)||(42010857-42010927)
chr3 (367-444)||(1455297-1455374)
chr3 (316-369)||(12094582-12094635)
chr3 (339-436)||(54086577-54086674)
chr3 (253-317)||(27638124-27638188)
chr3 (218-317)||(37729076-37729176)
chr3 (219-318)||(41740019-41740121)
chr3 (251-318)||(46048515-46048582)
chr3 (248-318)||(12077789-12077859)
chr3 (326-444)||(18356016-18356134)
chr3 (315-369)||(19911508-19911562)
chr3 (251-317)||(33287859-33287925)
chr3 (248-318)||(41727284-41727354)
chr3 (253-318)||(31819401-31819466)
chr3 (253-318)||(42891414-42891479)
chr3 (316-369)||(44277455-44277508)
chr3 (254-318)||(27047224-27047288)
chr3 (262-318)||(39617296-39617352)
chr3 (366-445)||(44522491-44522568)
chr3 (246-318)||(50363015-50363087)
chr3 (254-317)||(29611830-29611893)
chr3 (256-319)||(48901562-48901625)
chr3 (256-319)||(48903128-48903191)
chr3 (252-318)||(13084404-13084470)
chr3 (252-318)||(22659574-22659640)
chr3 (241-303)||(23157078-23157140)
chr3 (370-448)||(24064278-24064356)
chr3 (247-317)||(26121321-26121391)
chr3 (248-318)||(40645664-40645734)
chr3 (256-318)||(48309443-48309504)
chr3 (316-385)||(48963156-48963223)
chr3 (370-448)||(52805171-52805249)
chr3 (323-401)||(53559802-53559880)
chr3 (253-318)||(26998890-26998955)
chr3 (217-275)||(28477334-28477394)
chr3 (316-369)||(38805245-38805298)
chr3 (253-318)||(41308822-41308887)
chr3 (252-317)||(41543654-41543719)
chr3 (253-318)||(54555970-54556035)
chr3 (266-318)||(33412019-33412071)
chr3 (249-317)||(48581309-48581377)
chr3 (333-401)||(48820444-48820512)
chr3 (366-401)||(30171790-30171825)
chr3 (252-318)||(44083620-44083687)
chr3 (382-444)||(17755221-17755283)
chr3 (382-444)||(19056541-19056603)
chr3 (311-357)||(44276770-44276816)
chr3 (253-303)||(49000447-49000497)
chr3 (311-344)||(19823895-19823928)
chr3 (316-357)||(19912174-19912215)
chr3 (218-296)||(28228137-28228217)
chr3 (253-298)||(35145235-35145280)
chr3 (219-318)||(35765692-35765795)
chr3 (316-357)||(38806341-38806382)
chr3 (254-299)||(49891946-49891991)
chr3 (325-369)||(4235760-4235803)
chr3 (404-444)||(27707137-27707177)
chr3 (247-302)||(44698553-44698606)
[»] chr2 (75 HSPs)
chr2 (316-452)||(3518908-3519044)
chr2 (316-452)||(39938170-39938306)
chr2 (317-452)||(23366790-23366925)
chr2 (316-443)||(37673887-37674014)
chr2 (316-452)||(1102503-1102639)
chr2 (316-448)||(12969884-12970016)
chr2 (344-452)||(1646317-1646423)
chr2 (219-319)||(17663584-17663686)
chr2 (219-319)||(20361946-20362045)
chr2 (393-452)||(22388276-22388335)
chr2 (219-316)||(45214685-45214784)
chr2 (248-318)||(44424586-44424656)
chr2 (246-319)||(3645312-3645385)
chr2 (241-318)||(27297561-27297638)
chr2 (364-431)||(35179097-35179164)
chr2 (218-317)||(247619-247720)
chr2 (252-318)||(4398568-4398633)
chr2 (211-317)||(21012811-21012913)
chr2 (242-303)||(42250935-42250996)
chr2 (364-448)||(19976380-19976463)
chr2 (247-319)||(26512061-26512133)
chr2 (242-318)||(41865701-41865777)
chr2 (219-318)||(14420637-14420738)
chr2 (216-319)||(40346124-40346229)
chr2 (253-318)||(17251005-17251070)
chr2 (316-369)||(34224378-34224431)
chr2 (253-318)||(37355032-37355097)
chr2 (316-448)||(39562032-39562162)
chr2 (247-319)||(13477076-13477148)
chr2 (369-444)||(14779832-14779905)
chr2 (253-317)||(15851527-15851591)
chr2 (309-441)||(18078049-18078181)
chr2 (247-319)||(43650024-43650096)
chr2 (218-319)||(44421408-44421511)
chr2 (326-401)||(1002922-1002997)
chr2 (252-303)||(2395797-2395848)
chr2 (244-319)||(4033568-4033643)
chr2 (244-319)||(27749499-27749574)
chr2 (247-318)||(28264995-28265066)
chr2 (253-316)||(44274713-44274776)
chr2 (248-318)||(9718216-9718286)
chr2 (252-318)||(24774860-24774926)
chr2 (252-318)||(35178837-35178903)
chr2 (252-309)||(2917150-2917207)
chr2 (266-319)||(11071677-11071730)
chr2 (219-317)||(38449759-38449859)
chr2 (247-319)||(11459143-11459215)
chr2 (279-319)||(35453776-35453816)
chr2 (244-319)||(43709905-43709981)
chr2 (266-317)||(12121891-12121942)
chr2 (243-318)||(34042100-34042175)
chr2 (254-312)||(2048878-2048936)
chr2 (245-326)||(20426928-20427010)
chr2 (367-401)||(32840367-32840401)
chr2 (252-314)||(41665705-41665767)
chr2 (252-317)||(920701-920766)
chr2 (253-318)||(2131753-2131818)
chr2 (254-318)||(8065116-8065180)
chr2 (253-305)||(32860453-32860505)
chr2 (256-320)||(45150778-45150842)
chr2 (254-317)||(11168666-11168729)
chr2 (252-318)||(14527619-14527684)
chr2 (253-318)||(28733821-28733884)
chr2 (311-357)||(34222053-34222099)
chr2 (253-318)||(8384016-8384081)
chr2 (253-318)||(31644486-31644551)
chr2 (253-318)||(34329998-34330063)
chr2 (252-296)||(1829729-1829773)
chr2 (281-317)||(2521345-2521381)
chr2 (253-318)||(3237717-3237784)
chr2 (312-344)||(13125141-13125173)
chr2 (254-314)||(13534411-13534471)
chr2 (331-444)||(24777680-24777795)
chr2 (252-316)||(32677470-32677534)
chr2 (263-307)||(36117009-36117053)
[»] scaffold0054 (1 HSPs)
scaffold0054 (316-448)||(45454-45586)
[»] scaffold1770 (1 HSPs)
scaffold1770 (314-452)||(168-298)
[»] scaffold0062 (1 HSPs)
scaffold0062 (331-444)||(414-525)
[»] scaffold1091 (1 HSPs)
scaffold1091 (244-318)||(1957-2031)
[»] scaffold0056 (1 HSPs)
scaffold0056 (366-444)||(70874-70952)
[»] scaffold0005 (1 HSPs)
scaffold0005 (242-318)||(214603-214679)
[»] scaffold0257 (2 HSPs)
scaffold0257 (316-369)||(23467-23520)
scaffold0257 (313-357)||(23872-23916)
[»] scaffold0038 (1 HSPs)
scaffold0038 (246-318)||(38521-38593)
[»] scaffold0536 (1 HSPs)
scaffold0536 (7-63)||(5536-5592)
[»] scaffold0025 (1 HSPs)
scaffold0025 (382-444)||(65312-65375)
[»] scaffold0012 (1 HSPs)
scaffold0012 (247-318)||(99861-99932)
[»] scaffold0013 (1 HSPs)
scaffold0013 (247-317)||(49126-49196)
[»] scaffold0076 (1 HSPs)
scaffold0076 (367-403)||(15516-15551)
[»] scaffold0003 (1 HSPs)
scaffold0003 (242-298)||(45542-45598)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 48911426 - 48911227
Alignment:
Q  7 aagtaaggtatgaagtatatattaagtggtttctcttctccttcttccgtattcatcatctttgccttgtcttctgtgtgtttggatactatatatgaat 106  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  48911426 aagtaaggtatgaagtagatggtaagtgctttctcttctccttcttccgtattcatcatctttgccttgtcttctgtgtgtttggatactatgaatgaat 48911327  T
Q  107 tagaatgaacgtgatgatgagagaggtattgtactaattaattgtttctgctattgcttttaatgtccaacaatggaga-gatcctaactctggttgccc 205  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48911326 tagaatgaacgtgatgatgagagaggtattgtagcaattaactgtttctgctattgcttttaatgtccaacaatggagaggatcctaactctggttgccc 48911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 22321544 - 22321408
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  22321544 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttt 22321445  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22321444 tctataatacccttaatcatttattatttcattttat 22321408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 24706524 - 24706388
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24706524 tactccatccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 24706425  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24706424 tctataatacccttaatcatttattatttcattttat 24706388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 25704651 - 25704787
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25704651 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 25704750  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25704751 tctataatacccttaatcatttattatttcattttat 25704787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 44568837 - 44568973
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  44568837 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaaaaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttt 44568936  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  44568937 tctataatacccttaatcatttattatttcattttat 44568973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 316 - 450
Target Start/End: Original strand, 21310425 - 21310559
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21310425 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 21310524  T
Q  416 tctataatacccttaatcatttattattttatttt 450  Q
    ||||||||||||||||||||||||||||| |||||    
T  21310525 tctataatacccttaatcatttattatttcatttt 21310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 12071561 - 12071697
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  12071561 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaataaactaaataaattttgttatttttgatgaaaatatgtgtgtgttt 12071660  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12071661 tctataatacccttaatcatttattatttcattttat 12071697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 14261044 - 14261180
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  14261044 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgataaaaatatgtgtgtgttt 14261143  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  14261144 tctataatacccttaataatttattatttcattttat 14261180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 34324860 - 34324723
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaat-aaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaattaaattttgttatttttgatgaaaatatgtgtgtgtt 34324761  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34324760 ttctataatacccttaatcatttattatttcattttat 34324723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 40122762 - 40122626
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  40122762 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40122663  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||||||||||| |||||||    
T  40122662 tctataatacccttaaccatttattatttcattttat 40122626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 452
Target Start/End: Complemental strand, 21661817 - 21661676
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg 410  Q
    |||| |||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21661817 aataatactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtg 21661718  T
Q  411 tgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||| |||||||||||| |||||||    
T  21661717 tgttttctataatacctttaaccatttattatttcattttat 21661676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 452
Target Start/End: Complemental strand, 21670581 - 21670440
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg 410  Q
    |||| |||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21670581 aataatactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaatttttttatttttgatgaaaatatgtgtg 21670482  T
Q  411 tgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||| |||||||||||| |||||||    
T  21670481 tgttttctataatacctttaaccatttattatttcattttat 21670440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 50767864 - 50768000
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    ||||| |||||||||||||||||| | ||||||  |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  50767864 tactcattccgtttcaaaatacatattcattttagagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 50767963  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  50767964 tctataatacccttaataatttattatttcattttat 50768000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 20249292 - 20249158
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||  ||||||||||||||||||||||||||| | |||||| | ||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  20249292 tattactctctccgtttcaaaatacatgtccattttggataaattgtattaaccaagaaaccaaataaattttgttatttttgaagaaattatgtgtgtg 20249193  T
Q  413 ttttctataatacccttaatcatttattattttatt 448  Q
     |||||||||||||||||| ||||||||||||||||    
T  20249192 -tttctataatacccttaaccatttattattttatt 20249158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 318 - 444
Target Start/End: Original strand, 31892240 - 31892362
Alignment:
Q  318 ctccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttc 417  Q
    |||| ||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||    |||||||||    
T  31892240 ctccctccgtatcaaaatacatgttcattttaaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaatta----tgtgttttc 31892335  T
Q  418 tataatacccttaatcatttattattt 444  Q
    ||||||||| || | ||||||||||||    
T  31892336 tataatacctttgaccatttattattt 31892362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 12624656 - 12624758
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  12624656 tactccctccgtccctatatgtaaccccccgttgcttttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatatt 12624755  T
Q  317 act 319  Q
    |||    
T  12624756 act 12624758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 431
Target Start/End: Original strand, 1988036 - 1988150
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| || |||| |||||| ||||| |||| || ||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  1988036 tactccatctgttttaaaatatatgtctatttgga-gaaattgcagtaactaagaaatcaaataaattttattatttttgatgaaattatgtatgtgttt 1988134  T
Q  416 tctataatacccttaa 431  Q
    ||||||||||||||||    
T  1988135 tctataatacccttaa 1988150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 26203089 - 26203191
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  |||||||| |||||| |||||||||||||||||||||||| |||| ||||||| | |||||||| |||||||||    
T  26203089 atactccctccgtccctatatgtaagccccctttactttttccacatttattaagaaaagttgttactgtaattaatgtatatattttatgtgttaatat 26203188  T
Q  316 tac 318  Q
    |||    
T  26203189 tac 26203191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 444
Target Start/End: Complemental strand, 26676846 - 26676715
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||  ||||||||| ||||| | ||||||||||||||||| |||  |||||| |||||||||||| |||| |||||| |||||| | |  ||||     
T  26676846 tattactctctccgtttcacaatacttatccattttgaagaaattacacataccaaggaatcaaataaatgttgtcattttttatgaaattcttcgtgtt 26676747  T
Q  413 ttttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||| |||||||||||||    
T  26676746 ttttctataatacccttactcatttattattt 26676715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 20714577 - 20714497
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg-ttttctataatacccttaatcatttattattt 444  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||    
T  20714577 accaataaatcaaataaattttgttatttttgatgaaactatgtgtgtgtttttctataata-ccttaaccatttattattt 20714497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 31486446 - 31486550
Alignment:
Q  218 atactccctccgttcctatatgtacccccttt--gctttt-ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||| ||||||||||  ||||||  |||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| | ||||||||    
T  31486446 atactccctccgtccctatatgtaagccctttttgctttttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaata 31486545  T
Q  315 ttact 319  Q
    |||||    
T  31486546 ttact 31486550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 6129225 - 6129097
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||| ||||| | ||   ||||| |||||| |||  | |||||||||||||||||||||||||||||||| ||| | | ||| | |||    
T  6129225 tactccctccgtttcataatacttatcgcctttgatgaaattacacatatcaagaaatcaaataaattttgttatttttgataaaattctttgtattttt 6129126  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||| ||||||||||||||||||||||||    
T  6129125 tctacaatacccttaatcatttattattt 6129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 20291299 - 20291402
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||| ||| ||||||||||  | ||||||||||||||||||||| ||||||||||||| || |||| |||||||||||||||| |  ||||||||    
T  20291299 atactcccttcgtccctatatgtaaactccctttgcttttttcacatttcttaagaaaagttggtaatgtaattaatgtgtctattttgtgggttaatat 20291398  T
Q  316 tact 319  Q
    ||||    
T  20291399 tact 20291402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 19692748 - 19692851
Alignment:
Q  341 tccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttatt 440  Q
    |||||||||||||||||  ||  ||||||||||||||||||| |||| |||||| |||||| | | ||||| |||||||||||| ||||| |||||||||    
T  19692748 tccattttgaagaaattatacataccaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttatt 19692847  T
Q  441 attt 444  Q
    ||||    
T  19692848 attt 19692851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 19703333 - 19703436
Alignment:
Q  341 tccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttatt 440  Q
    |||||||||||||||||  ||  ||||||||||||||||||| |||| |||||| |||||| | | ||||| |||||||||||| ||||| |||||||||    
T  19703333 tccattttgaagaaattatacataccaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttatt 19703432  T
Q  441 attt 444  Q
    ||||    
T  19703433 attt 19703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 25477216 - 25477286
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||| ||||||||||||    
T  25477216 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatattac 25477286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 28116621 - 28116551
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| | ||||||||||    
T  28116621 ctttgcttttttcacattttttaagaaaagttgttagtgtaattaatatgtctattttgtgtgttaatatt 28116551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 14602775 - 14602699
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||    
T  14602775 ccccttttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattac 14602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 22651450 - 22651525
Alignment:
Q  243 cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||||||| ||||||||| || ||| |||| ||||||||| |||||| ||||||||||||||    
T  22651450 cccctttgcttttttcacatttcttaagaaaatttattaatgtaattaatgtgtttattttgtatgttaatattac 22651525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 37175136 - 37175066
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| | ||||||||||||    
T  37175136 tttgcttttttcacatttcttaagaaaagttgtt-gtgtaattaatgtgtctattttgtgtgttaatattac 37175066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 38136344 - 38136415
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||| | |||||||||||    
T  38136344 ctttggttttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatatta 38136415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 29584881 - 29584955
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||| | | ||||||||||||    
T  29584881 ccctttgcatttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattctgtgtgttaatattac 29584955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 452
Target Start/End: Original strand, 32543532 - 32543616
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||| ||||||| |||||||| ||||||||||| | | ||||| |||| ||||||||||||||||||||||||||| |||||||    
T  32543532 aagaaaccaaataatttttgttaattttgatgaaattctttgtgtttttt-tataatacccttaatcatttattatttcattttat 32543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 13096692 - 13096586
Alignment:
Q  213 aaataatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgtt 310  Q
    |||| ||||||||||||| ||| ||| ||  | |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| | || | ||||    
T  13096692 aaattatactccctccgtccctgtatttaaactccctttacttttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctgtgttgtgtgtt 13096594  T
Q  311 aatattac 318  Q
    ||||||||    
T  13096593 aatattac 13096586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 34543692 - 34543763
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| ||||||||| ||||||||||||||  ||||| |||||||||||||||| | ||||||||||||    
T  34543692 tttgctttattcacatttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattac 34543763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 20262508 - 20262438
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  20262508 ttgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 20262438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 3684306 - 3684233
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||||||||||||||||||||  ||||  ||||| |||||||||||||||| | | |||||||||    
T  3684306 ccctttgcttttttcacatttattaagaaagattgtcggtgtaattaatgtgtctattttgtgtattaatatta 3684233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 5416983 - 5416913
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||| ||||||||||||||| |||||  ||||||||||||||| | ||||||||||||    
T  5416983 ctttgcttctttcacatttcttaagaaaagttgtttgtgta--taatgtgtctattttgtttgttaatattac 5416913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 19654424 - 19654489
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||  |||||||||| |||||||||||||||||| |||| |||||||    
T  19654424 tttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctattttatgtgttgatattac 19654489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 30153338 - 30153266
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | || |||||||||    
T  30153338 ctttgcgtttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattac 30153266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 52226015 - 52226079
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||||||| ||||| ||| || ||||||||||| ||||||||||||||||||    
T  52226015 tttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatatta 52226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 7002142 - 7002244
Alignment:
Q  219 tactccctccgttcctatatgtaccccc--tttgcttttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||||||| ||||||| || ||||  |||||||||||||||||| || ||||||| |||||| || | ||||||| | |||||||| |||||||||    
T  7002142 tactccctccgtccctatatataacccccttttgcttttttcacatttctttaagaaaaattgttaatgcaattaatgtttatattttatgtgttaatat 7002241  T
Q  316 tac 318  Q
    |||    
T  7002242 tac 7002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 439
Target Start/End: Complemental strand, 34284234 - 34284171
Alignment:
Q  376 aataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttat 439  Q
    |||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||| ||||||    
T  34284234 aataaattttgttacttttgatgaaactatttgtattttttctataatacccttaattatttat 34284171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 37625235 - 37625168
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||| |||||||||||||| ||| || ||||||||| |||||| | |||||||||||||    
T  37625235 ttttttcacatttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattact 37625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 3094177 - 3094243
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||| ||||||||||||||||  ||| |||||||||||||||| | ||||||||||||    
T  3094177 ttttttgacatttcttaagaaaagttgttaaagtaattaatgtgtctattttgtgtgttaatattac 3094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 30049419 - 30049477
Alignment:
Q  245 cctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    ||||| |||||||||||||| |||||||||||  |||||||| ||||||||||||||||    
T  30049419 cctttacttttttcacattttttaagaaaagtgattagtgtaattaatgtgtctatttt 30049477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 48472605 - 48472539
Alignment:
Q  253 tttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| || |||||||||||| |||||| |||||||||||||||| | ||||||||||||    
T  48472605 tttttcacatttttttaagaaaagttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 48472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 20293731 - 20293809
Alignment:
Q  245 cctttgcttttttcacatttattaagaaaagttgttagtg----tagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||||||||| |||||||||||||| ||||    || ||||||||| |||||| |||| ||||||||||    
T  20293731 cctttgcttttttcacatttcttaagaaaagttgtcagtgtaattaattaatgtgtatattttttatgctaatattact 20293809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 33246606 - 33246541
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||||||| ||||||||||||||||||||| ||||  |||||||||| | ||||||||||||    
T  33246606 ttttccacattttttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattac 33246541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 39237698 - 39237633
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||| ||| |||| | ||||||||||||    
T  39237698 tttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattac 39237633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 41920147 - 41920082
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||||||| | ||||| | |||||||| | ||||||||||||    
T  41920147 tttttcacatttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattac 41920082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 46729302 - 46729366
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  46729302 tttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 46729366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 48652268 - 48652305
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48652268 accaagaaatcaaataaattttgttatttttgatgaaa 48652305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 50782774 - 50782839
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | | ||||||||||    
T  50782774 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatattac 50782839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 51787767 - 51787832
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||| |||| | ||||||||||||    
T  51787767 tttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattac 51787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 56373453 - 56373388
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||| ||||||||| | ||||||||| |||||| | ||||||||||||    
T  56373453 tttttcacatttcttaagaaaaattgttagtgcaattaatgtgtttattttgtgtgttaatattac 56373388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 10602317 - 10602249
Alignment:
Q  252 ttttttcacatt-tattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||| | ||||||||||||| ||||||| ||||| |||||||||| | |||||||||||||    
T  10602317 ttttttcacattcttttaagaaaagttggtagtgtaattaatttgtctattttgtgtgttaatattact 10602249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 52198844 - 52198792
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||| |||||    
T  52198844 ctttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatatgtct 52198792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 22750987 - 22750886
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| |||  |||||  ||| |||||| |||||||||||| ||||||||||||||  ||||| ||||||| ||| |||| | | ||||||||    
T  22750987 tactccctccgtcccttaatgtaatccctctttgcatttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatatt 22750888  T
Q  317 ac 318  Q
    ||    
T  22750887 ac 22750886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 54701434 - 54701357
Alignment:
Q  217 aatactccctccgttcctatatgtac--cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaat 292  Q
    |||||||||||||||||| ||||||   | ||||| | |||||||||||| |||||||||||||| |||||| |||||    
T  54701434 aatactccctccgttcctgtatgtaagtctcctttacatttttcacattttttaagaaaagttgtcagtgtaattaat 54701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 5932882 - 5932946
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||| | |||| | |||||||||||    
T  5932882 ttttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatatta 5932946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 16070427 - 16070492
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||| | ||| |||||| ||||||||||| |||| | ||||||||||||    
T  16070427 tttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 16070492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 754542 - 754502
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgtta 281  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  754542 accccttttgcttttttcacattttttaagaaaagttgtta 754502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 20185802 - 20185723
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgc-ttttttcacatttattaagaaaagttgttagtgtagttaatgtg 295  Q
    |||||||| ||| ||||||||||  | |||||| | ||||||||||||| ||||||||| ||||||||||| ||||||||    
T  20185802 tactccctacgtccctatatgtaaactccctttacattttttcacatttcttaagaaaatttgttagtgtaattaatgtg 20185723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 24072763 - 24072827
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| |||||| |||||||||||||| | |||| ||||||||||| |||| | |||||||||||    
T  24072763 ttttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatatta 24072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 32866463 - 32866542
Alignment:
Q  218 atactccctccgttcctatatgtac--cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtg 295  Q
    ||||||| | ||||||||||||||   ||||||||| ||| |||||||| ||||||||||||||  ||||| ||||||||    
T  32866463 atactcctttcgttcctatatgtaagtcccctttgcatttctcacatttcttaagaaaagttgtcggtgtaattaatgtg 32866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 722377 - 722416
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgtta 281  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  722377 ccccttttgcttttttcacattttttaagaaaagttgtta 722416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 18507484 - 18507430
Alignment:
Q  371 aatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacc 426  Q
    ||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  18507484 aatcaaataaaatt-gttatttttgatgaaattttgtgtgttttttctataatacc 18507430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 20016520 - 20016584
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| |||||||| || ||||||| | ||||  |||||||||| ||||||||||||||    
T  20016520 ttttttcacattttttaagaaaggtagttagtgcaattaa--tgtctattttgtatgttaatattac 20016584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 20791929 - 20791988
Alignment:
Q  259 acatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| ||||||||||||| ||||| | ||||| |||||||||| | ||||||||||||    
T  20791929 acatttcttaagaaaagttggtagtgcaattaatatgtctattttgtgtgttaatattac 20791988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 56217137 - 56217102
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagt 283  Q
    ||||||||||||||||| ||||||||||||||||||    
T  56217137 ttgcttttttcacattttttaagaaaagttgttagt 56217102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 5536493 - 5536543
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||||| ||||    
T  5536493 tttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgtttt 5536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 19361662 - 19361700
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaaccaag 19361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 39414230 - 39414296
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||| |||| ||||||||||||| || || | ||||| |||||||||| | |||||||||||    
T  39414230 cttttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatatta 39414296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 45628184 - 45628118
Alignment:
Q  253 tttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| || ||||||||||||||||||| || |||||||| |||| | | ||||||||||    
T  45628184 tttttcacatttttttaagaaaagttgttagtgtaattgatgtgtctgttttgtgtattaatattac 45628118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 52977551 - 52977616
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||  |||| ||||||||||| || | || ||||||||||||||| |||||||||||    
T  52977551 cttttttcacattc-ttaaaaaaagttgttaatgcaattcatgtgtctattttatgtgttaatatta 52977616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 19433353 - 19433386
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtcca 344  Q
    ||||||||||| ||||||||||||||||||||||    
T  19433353 aatattactccctccgtttcaaaatacatgtcca 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 41945881 - 41945817
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||| | |||||| || |||||||||    
T  41945881 tttttcacattttttaagaaaaattgtcagtgtaattaatgtgt-tgttttatgtgataatattac 41945817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 33392585 - 33392541
Alignment:
Q  263 ttattaagaaaagttgttagtgtagttaatgtgtctattttatat 307  Q
    ||||||| |||||||| ||||||||||| ||||| ||||||||||    
T  33392585 ttattaaaaaaagttggtagtgtagttattgtgtttattttatat 33392541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 45079920 - 45079856
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||||| ||||||| | ||||  | |||||||| | |||||||||||    
T  45079920 tttttcacatttcttaagaaaagtagttagtgcaattaacatatctattttgtgtgttaatatta 45079856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 52552619 - 52552555
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| ||| |||||||||||||| |||||| | ||| |||||  ||||| ||||||||||||    
T  52552619 ttttcacgttttttaagaaaagttgtcagtgtaataaatttgtctgctttatgtgttaatattac 52552555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 54359693 - 54359741
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    |||||||||||||| ||| || ||||||||||| |||||| ||||||||    
T  54359693 ttaagaaaagttgtcagtataattaatgtgtctgttttatgtgttaata 54359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 55209840 - 55209808
Alignment:
Q  312 atattactccttccgtttcaaaatacatgtcca 344  Q
    |||||||||| ||||||||||||||||||||||    
T  55209840 atattactccctccgtttcaaaatacatgtcca 55209808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 40348960 - 40349096
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40348960 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40349059  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40349060 tctataatacccttaatcatttattatttcattttat 40349096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 10981508 - 10981644
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10981508 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 10981607  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10981608 tctataatacccttaatcatttattatttcattttat 10981644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 27813811 - 27813947
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  27813811 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtatgtgttt 27813910  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27813911 tctataatacccttaatcatttattatttcattttat 27813947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 318 - 452
Target Start/End: Complemental strand, 36453399 - 36453265
Alignment:
Q  318 ctccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttc 417  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  36453399 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgttttttc 36453300  T
Q  418 tataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||| |||||||    
T  36453299 tataatacccttaatcatttattatttcattttat 36453265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 47110449 - 47110585
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||    
T  47110449 attactccctccatttcaaaatacatgtccattttggagaaattgcactaaccaagaaacaaaataaattttgttatttttgatgaaaata--tgtgtgt 47110546  T
Q  414 tttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47110547 tttctataatacccttaatcatttattattttattttat 47110585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 314 - 452
Target Start/End: Complemental strand, 25614630 - 25614494
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||    
T  25614630 attactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgt--gtgt 25614533  T
Q  414 tttctataatacccttaatcatttattattttattttat 452  Q
    |||||  |||||||||||||||||||||||| |||||||    
T  25614532 tttctgaaatacccttaatcatttattatttcattttat 25614494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 23875996 - 23876099
Alignment:
Q  218 atactccctccgttcctatatgtacc--ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||    ||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||||| |||||||||    
T  23875996 atactccctccgtccctatatgtaaattccctttgcttttttcacatttcttaaaaaaagttgttagtgtagttaatatgtccattttatgtgttaatat 23876095  T
Q  316 tact 319  Q
    ||||    
T  23876096 tact 23876099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 26632836 - 26632908
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  26632836 tttgcttttttcacattttttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattact 26632908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 37491760 - 37491663
Alignment:
Q  223 ccctccgttcctatatgtacc--ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||||    | |||| |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  37491760 ccctccgttcctatatgtaagttctctttacttttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattac 37491663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 364 - 444
Target Start/End: Original strand, 3091565 - 3091645
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||| |||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||| ||||||||||||    
T  3091565 accaaaaaatcaaataaattttgttatttttgatgaaattctttgtgttttttctataatacccttaaccatttattattt 3091645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 20123409 - 20123510
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||| ||||||| ||||||||||  | ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||| | |||||||||    
T  20123409 atacttcctccgtccctatatgtaaactccctttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 20123508  T
Q  316 ta 317  Q
    ||    
T  20123509 ta 20123510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 20124144 - 20124236
Alignment:
Q  215 ataatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttat 305  Q
    |||||||||||||||| |||  |||||  |||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  20124144 ataatactccctccgtcccttaatgtaagccccttttgcttttttcacattttttaagaaaagttgttggtgtaattaatgtgtctattttat 20124236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 29636188 - 29636084
Alignment:
Q  216 taatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||||||||||||| ||||||||||  |||||||||| |||| ||||||| |||||||||||||| | |||| ||||||||||| |||| | |||||||    
T  29636188 taatactccctccgtccctatatgtaaaccccctttgcattttacacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaat 29636089  T
Q  314 attac 318  Q
    |||||    
T  29636088 attac 29636084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 48193600 - 48193676
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  48193600 ccccctttgcatttttcacattttttaagaaaaattgttagtgtaattaatgtgtctattttgtgtgttaatattac 48193676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 16662146 - 16662226
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    |||||||| |||||||||||||||||||||||||||  || ||||| |||| |||||||||||||| ||||||||||||||||    
T  16662146 caagaaataaaataaattttgttatttttgatgaaa--atttgtgttttttttataatacccttaaccatttattattttatt 16662226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 17636506 - 17636586
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    |||||||| |||||||||||||||||||||||||||  || ||||| |||| |||||||||||||| ||||||||||||||||    
T  17636506 caagaaataaaataaattttgttatttttgatgaaa--atttgtgttttttttataatacccttaaccatttattattttatt 17636586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 16360384 - 16360510
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| | ||||||| ||||| |||   |||||| |||||| |||  ||||  ||||||||||||||||||||||||||||||||   | ||||| |||    
T  16360384 tactccattcgtttcataatacttgttgcttttgaggaaattacacataccagaaaatcaaataaattttgttatttttgatgaaa--ttctgtgttttt 16360481  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||||||||||||||| ||||||||||||    
T  16360482 tctataatacccttaaccatttattattt 16360510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 7743625 - 7743546
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |  ||||||||||||| ||||| |||||||||||    
T  7743625 accaagatatcaaataaattttgttatttttgatgaaattatgtgt-ttctttctataataccgttaattatttattattt 7743546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 40740911 - 40741011
Alignment:
Q  219 tactccctccgttcctatatgtaccccctttgct-tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||| || |||||||  | |||||||||||| |||||||||||||||| |||| ||||| |||||||||| | |||||||||||    
T  40740911 tactccctccgtccctatatataaccccttttatctttttcacatttcttaagaaaagttgttaatgtaattaatatgtctattttgtgtgttaatatta 40741010  T
Q  318 c 318  Q
    |    
T  40741011 c 40741011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 444
Target Start/End: Original strand, 37983179 - 37983280
Alignment:
Q  339 tgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcattta 438  Q
    |||||||||||| |||||| |||  | ||||||||||||||||||||||||||||||||||||     | | |||||| ||||||||| |||| ||||||    
T  37983179 tgtccattttgaggaaattacacatatcaagaaatcaaataaattttgttatttttgatgaaa----ttttatgttttttataatacctttaaccattta 37983274  T
Q  439 ttattt 444  Q
    ||||||    
T  37983275 ttattt 37983280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 6376273 - 6376176
Alignment:
Q  219 tactccctccgttcctatatgtaccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||  |||    |||||||||||||| ||||||||| ||||||||||| ||||||| ||| |||| | ||||||||||||    
T  6376273 tactccctccgtccctatatgtaagccca---cttttttcacatttcttaagaaaaattgttagtgtaattaatgtctctgttttgtgtgttaatattac 6376177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 18122151 - 18122085
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||| |||||||||||||| |||||| ||| ||||||| |||||| |||||||||||||    
T  18122151 tttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatattact 18122085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 4089609 - 4089544
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  4089609 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 4089544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 19236176 - 19236111
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  19236176 tttttcacatttcgtaagaaaagttgttagtgtaattaatgtgtcggttttgtatgttaatattac 19236111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 21388231 - 21388304
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||| ||||||||| ||||  ||||| ||||||||||| |||| | |||||||||||||    
T  21388231 ctttgcttttttcacatttcttaagaaaatttgtcggtgtaattaatgtgtctgttttgtgtgttaatattact 21388304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 25060186 - 25060133
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  25060186 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 25060133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 46783950 - 46783885
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||| |||||| | ||||||||||||| |||| ||||||||||||    
T  46783950 tttttcacatttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattac 46783885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 27942256 - 27942188
Alignment:
Q  376 aataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||||| |||||||| |||| | ||||||||| |||||||||||||| |||| ||||||||||||    
T  27942256 aataaatttttttatttttaatgagattatgtgtgttttttctataatacctttaaccatttattattt 27942188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 31373813 - 31373741
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||| |||||||||||| ||||||||| ||||||| | | |||||||||||||||| | |||||||||||||    
T  31373813 tttgcatttttcacatttcttaagaaaaattgttagggcaattaatgtgtctattttgtgtgttaatattact 31373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 448
Target Start/End: Original strand, 8379949 - 8380076
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg-tgttttctata 421  Q
    ||||||||| ||||| |||| ||||||| |||||| ||   || ||||||||||||||||||||||||| || |||||  | | |||| | |||||||||    
T  8379949 tccgtttcacaatacttgtcgattttgaggaaattacatatactaagaaatcaaataaattttgttattgttaatgaacttttttgtgcttttttctata 8380048  T
Q  422 atacccttaatcatt-tattattttatt 448  Q
    |||||| |||||||| ||||||| ||||    
T  8380049 atacccctaatcattatattattctatt 8380076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 10685079 - 10685146
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||| |||| |||||||||||| | |||||| ||||||||||| |||||| ||||||||||||    
T  10685079 cttttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatattac 10685146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 19477525 - 19477460
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||| ||||||||||||||||||||| |||||| || |||||||||||||||| ||||    
T  19477525 tttttttacattt-ttaagaaaagttgttagtgtaattaatgcgtttattttatatgttaatgttac 19477460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 27213483 - 27213549
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||| ||||||||||||||||||| |  |||| |||||||||| | |||||||||||||    
T  27213483 tttttcacatttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatattact 27213549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 48767555 - 48767625
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||| |||| ||| ||||| |||||| ||||||||||| |||| | ||||||||||||    
T  48767555 ttgcttttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 48767625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 2276686 - 2276621
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||| ||||||||| |||||||||||| ||||| |||| | ||||||||||||    
T  2276686 tttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattac 2276621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 2911601 - 2911548
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  2911601 tactccctccatttcaaaatacatgtccattttggagaaattgcagtaaccaag 2911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 25750364 - 25750429
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||| ||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  25750364 tttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 25750429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 29992979 - 29993032
Alignment:
Q  261 atttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    |||| ||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  29992979 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaata 29993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 36116317 - 36116382
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||| |||||  ||||| ||||||||||| |||||| ||||||||||||    
T  36116317 tttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaatattac 36116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 452
Target Start/End: Complemental strand, 3498983 - 3498895
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttattttat 452  Q
    ||||| || |||||| ||||||||||||||| |||||| | | ||| | |||||||||||||  |||| |||||||||||| |||||||    
T  3498983 accaaaaattcaaattaattttgttattttttatgaaattttttgtatcttttctataatacttttaaccatttattatttcattttat 3498895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 21753433 - 21753502
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||||| |||||||  |||| |||||||||||    
T  21753433 ctttgcttttttcacatttcttaataaaagtggttagtttagttaacgtgtcta--ttatgtgttaatatta 21753502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 37673733 - 37673797
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||||| |||| | |||||||||||    
T  37673733 tttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatatta 37673797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 21801166 - 21801099
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||| ||||||||||||||   |||| ||||||||||| |||| | |||||||||||||    
T  21801166 ttttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttgtgtgttaatattact 21801099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 21809756 - 21809690
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||| ||||||||||||||   |||| ||||||||||| |||| | |||||||||||||    
T  21809756 tttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttttgtgttaatattact 21809690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 28663715 - 28663815
Alignment:
Q  218 atactccctccgttcctatatgtaccccctttgctttttt--cacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||| || |||||||  ||||||  ||||||| |||||||| ||||||| |  | |||||||||||||||| | |||||||||    
T  28663715 atactccctccgtccctatatataaccccttttgttttttttcacatttcttaagaaa-gttgttaatacaattaatgtgtctattttgtgtgttaatat 28663813  T
Q  316 ta 317  Q
    ||    
T  28663814 ta 28663815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 48610250 - 48610180
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| | |||| ||||||||||| |||| | | ||||||||||    
T  48610250 ttgcatttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatattac 48610180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 28200298 - 28200339
Alignment:
Q  407 tgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  28200298 tgtgttttttctataatatccttaatcatttattattttatt 28200339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 37048030 - 37048091
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||||||||||| |||||||||||| | |||||| ||||||||||| |||| | |||||||    
T  37048030 ttttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaat 37048091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 40211386 - 40211321
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| ||||||||| ||||| ||||| ||||||||||| |||| | ||||||||||||    
T  40211386 tttttcatattttttaagaaaaattgtttgtgtaattaatgtgtctgttttgtgtgttaatattac 40211321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 40263707 - 40263772
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||| ||||   ||||||||||||    
T  40263707 tttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgttttgattgttaatattac 40263772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 42993298 - 42993233
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||| |||||| |||||||||||||||| |  | |||| ||||||||||||| |||||||||||    
T  42993298 tttttttacatttcttaagaaaagttgttaatacaattaacgtgtctattttatgtgttaatatta 42993233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 5334491 - 5334439
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||| ||||||||||| ||||||||| | |||| ||||||||||||||    
T  5334491 ttaagaaaaattgttagtgtaattaatgtgtttgttttgtatgttaatattac 5334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 401
Target Start/End: Complemental strand, 24457015 - 24456927
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    ||||||||| || |||||||||||| ||    |||||| |||||| |||  || || ||||||||||||||||||||||||| ||||||    
T  24457015 tattactccatctgtttcaaaatacttgctgcttttgaggaaattacacatactaaaaaatcaaataaattttgttattttttatgaaa 24456927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 26201111 - 26201013
Alignment:
Q  222 tccctccgttcctatatgtaccc--cctttgc-ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||| ||||||||||  |  ||||||| |||||||| |||| |||||||||||| |||||| | ||| |||||||||||| | | |||||||||    
T  26201111 tccctccgtccctatatgtaagcatcctttgcattttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatatta 26201013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 33181285 - 33181356
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||||||| |||| |||| ||| ||||| |||||||||||||||| | |||| ||| ||||||||||    
T  33181285 tttgcatttttcatatttcttaaaaaatgttgtcagtgtagttaatgtgtttgttttgtatattaatattac 33181356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 316
Target Start/End: Complemental strand, 44648810 - 44648763
Alignment:
Q  269 agaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  44648810 agaaaagttgttaatgtaatcaatgtgtctattttgtatgttaatatt 44648763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 10595212 - 10595146
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||| |||||||||||| |||||||||||||| ||| || ||||| ||||| |||| | |||||||    
T  10595212 tttgcgtttttcacatttcttaagaaaagttgtcagtataattaatatgtctgttttgtgtgttaat 10595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 21752515 - 21752589
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||| ||||||| |||| |||||||||||||| | ||||| ||| |||||| |  |||||||||||    
T  21752515 ccctttgcattttccacatttcttaaaaaaagttgttagtgcaattaatttgtttattttgtgggttaatattac 21752589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 42983705 - 42983659
Alignment:
Q  271 aaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||| | ||||| ||||||||||| ||||||||||||||||||    
T  42983705 aaaagttgatggtgtaattaatgtgtctcttttatatgttaatatta 42983659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 49100662 - 49100732
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||| ||| | |||| | ||||||| |||||| ||||||||||| |||||| ||||||||||||    
T  49100662 ttgcctttttcgcatctcttaaaataagttgtcagtgtaattaatgtgtctgttttatgtgttaatattac 49100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 1324699 - 1324764
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    |||| |||||||||||| |||||||| ||| | |||||| ||||||||||| |||| | |||||||    
T  1324699 ttgcctttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaat 1324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 2910859 - 2910900
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| |||||||||||||||||||| ||||| ||||||||    
T  2910859 tactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 35128382 - 35128444
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||  ||||||||||||| |||||| ||||| ||||| |||| | |||||||||||    
T  35128382 tttttcacattt--taagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatatta 35128444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 36195393 - 36195457
Alignment:
Q  259 acatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattactcctt 323  Q
    |||||| || |||||| |||||||| || |||||||||||||||| | | | |||||||||||||    
T  36195393 acatttctttagaaaaattgttagtataattaatgtgtctattttgtgtataaatattactcctt 36195457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 41672662 - 41672626
Alignment:
Q  267 taagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  41672662 taagaaaacttgttagtgtaattaatgtgtctatttt 41672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 46688581 - 46688530
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttat 305  Q
    ||||||||  |||||||||||||| || ||||||||||||||||| |||||||    
T  46688581 tttttcactcttattaagaaaagtagt-agtgtagttaatgtgtcaattttat 46688530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 25773649 - 25773785
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 25773748  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25773749 tctataatacccttaatcatttattatttcattttat 25773785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 12807130 - 12806994
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 12807031  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12807030 tctataatacccttaatcatttattatttcattttat 12806994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 313 - 452
Target Start/End: Complemental strand, 30720772 - 30720633
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30720772 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtg 30720673  T
Q  413 ttttctataatacccttaatcatttattattttattttat 452  Q
    |||| |||||||||||||||||| |||||||| |||||||    
T  30720672 ttttttataatacccttaatcatctattatttcattttat 30720633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 40886887 - 40886751
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  40886887 tactccatccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcgaataaattttgttatttttgatgaaaatatgtgtgtattt 40886788  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40886787 tctataatacccttaatcatttattatttcattttat 40886751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 10285334 - 10285198
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| |||||||||||||| ||||| |||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10285334 tactccctccgtttcaaaatagatgtctattttggagaaattgcattaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgtgttt 10285235  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10285234 tctataatacccttaatcatttattatttcattttat 10285198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 452
Target Start/End: Complemental strand, 36561381 - 36561240
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg 410  Q
    ||||||||||| ||||||||||||||||||||||||||  | |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  36561381 aatattactccatccgtttcaaaatacatgtccattttagaaaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtg 36561282  T
Q  411 tgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||| |||||||||||| |||||||    
T  36561281 tgttttctataatacctttaaccatttattatttcattttat 36561240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 37900901 - 37900773
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||| |||||||||||  |||||||||||| |||||||||||||| ||| |||||||||    
T  37900901 tactccctccgtttcaaaatacacatccattttggagaaattgcagtaaccaagaaactaaataaattttgatatttttgatgaaattatatgtgtgttt 37900802  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||||||||||||||| ||||||||||||    
T  37900801 tctataatacccttaaccatttattattt 37900773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 39690631 - 39690528
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39690631 atactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatat 39690532  T
Q  316 tact 319  Q
    ||||    
T  39690531 tact 39690528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 327 - 444
Target Start/End: Complemental strand, 7277688 - 7277571
Alignment:
Q  327 tttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacc 426  Q
    |||||||||||||||| |||||| |||||||| | ||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7277688 tttcaaaatacatgtctattttggagaaattggagtaaccaataaaccaaataaattttgttatttttgatcaaattatgtgtgtgttttctataatacc 7277589  T
Q  427 cttaatcatttattattt 444  Q
     |||| ||||||||||||    
T  7277588 tttaaccatttattattt 7277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 27642467 - 27642564
Alignment:
Q  223 ccctccgttcctatatgta-ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27642467 ccctccgtccctatatgtaaccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattact 27642564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 21912081 - 21912180
Alignment:
Q  219 tactccctccgttcctatatgtac-cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21912081 tactccctccgtccctatatataagcccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 21912180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 354 - 448
Target Start/End: Complemental strand, 25683467 - 25683373
Alignment:
Q  354 aattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  25683467 aattgcaataaccaagaaaccaaataaattttgttatttttgataaaattatgtgtgtgttttctataatacccttaaccatttattattttatt 25683373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 450
Target Start/End: Original strand, 16983258 - 16983393
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataa--attttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||| || |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||   |||| || ||||||||||||  || ||||| |    
T  16983258 tactccctctgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttttttttttgatgaaatgatatgtgttt 16983357  T
Q  414 tttctataatacccttaatcatttattattttatttt 450  Q
    |||||| ||||||||||| || |||||||||||||||    
T  16983358 tttctacaatacccttaacca-ttattattttatttt 16983393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 734607 - 734487
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||| ||||| ||||||||||||||||||| | |  |||||  ||||||||||||||||| ||| ||||||||| | | ||||| ||||||||||    
T  734607 tccgtttcacaatacttgtccattttgaagaaattactcataccaaagaatcaaataaattttgtcattattgatgaaattctttgtgt-ttttctataa 734509  T
Q  423 tacccttaatcatttattattt 444  Q
    |||||||| |||||||||||||    
T  734508 tacccttactcatttattattt 734487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 39070883 - 39071011
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatg-tgtgtgtt 414  Q
    |||||| ||||||||| ||||| ||| ||||||||||||||| |||  |  ||| |||||||||||| |||| |||||||||| |||| || ||||| ||    
T  39070883 tactccctccgtttcacaatacttgttcattttgaagaaattacacatattaaggaatcaaataaatgttgtcatttttgatg-aaatctgttgtgtttt 39070981  T
Q  415 ttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||| |||||||||||||    
T  39070982 ttctataatacccttactcatttattattt 39071011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 23098503 - 23098386
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||| |||||||||| |||||||||||| ||       |||||  ||||||||||||||||||||||||||| ||||||  |||||    
T  23098503 tactccatccgtttcaaa-tacatgtccaatttgaagaaattaca-------agaaactaaataaattttgttatttttgatgaaattatgtgcatgttt 23098412  T
Q  416 tctataatacccttaatcatttatta 441  Q
     ||||||||||||||| |||||||||    
T  23098411 cctataatacccttaaccatttatta 23098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 11319566 - 11319687
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||| ||||  ||||||||||||||||||| |||  || ||  |||||||||||| |||| |||||| |||||| | | ||| | ||||||||||    
T  11319566 tccgtttcacaatatttgtccattttgaagaaattacacatactaatgaatcaaataaatgttgtaattttttatgaaattctttgttttttttctataa 11319665  T
Q  423 tacccttaatcatttattattt 444  Q
    |||||||| |||||||||||||    
T  11319666 tacccttactcatttattattt 11319687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 452
Target Start/End: Complemental strand, 30403191 - 30403102
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtg-tgtgttttctataatacccttaatcatttattattttattttat 452  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| | | ||||||||||||| ||||||||||| |||||| |||||||    
T  30403191 accaagaaaccaaataaattttgttatttttgatgaaattctgtgtttttttttctataatactcttaatcatttgttatttcattttat 30403102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 43060626 - 43060553
Alignment:
Q  245 cctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||| | ||||||||||||    
T  43060626 cctttgtttttttcacattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 43060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 38972271 - 38972170
Alignment:
Q  218 atactccctccgttcctatatgtaccccc--tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  | |  ||| | |||||||||||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  38972271 atactccctccgtccctatatgtaaacacattttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtcta-tttaaatgttaatat 38972173  T
Q  316 tac 318  Q
    |||    
T  38972172 tac 38972170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 21574988 - 21574923
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||| ||| |||||||| |||||||||||||||| ||||||||||||||    
T  21574988 tttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatattac 21574923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 30348192 - 30348120
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||||| | |||||||||||||| | || |||||||||||||||| | ||||||||||||    
T  30348192 ctttgcttttttcacatttctgaagaaaagttgttaatttacttaatgtgtctattttgtgtgttaatattac 30348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 3559172 - 3559070
Alignment:
Q  216 taatactccctccgttcctatatgtac-cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||||| |||| |||||  |||||||  ||||||||||||| ||||||||| ||||| || || |||||||||||||||| | ||||||||    
T  3559172 taatactccctccgt-cctaaatgtaaaccccttttgttttttcacatttcttaagaaaaattgttggtataattaatgtgtctattttgtgtgttaata 3559074  T
Q  315 ttac 318  Q
    ||||    
T  3559073 ttac 3559070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 27587825 - 27587900
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||| |||||||||||||| |||||||||||||| ||| || ||||||||||| |||| | |||||||||||||    
T  27587825 ccctttacttttttcacatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattact 27587900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 4857611 - 4857536
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtg----tagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||| |||| ||||||||||||||    || |||||||||||||||||| |||||||||||||    
T  4857611 ttgcttttttcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattact 4857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 11980712 - 11980778
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||| |||| |||| |||||||||||||||| |||||||||||||||| | |||||||||||||    
T  11980712 tttttcatattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattact 11980778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 14044608 - 14044542
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||| | |||||||||    
T  14044608 cttttttcacatttcttaagaaaagttgttaatgcagttaatatgtctattttatgtattaatatta 14044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 10523418 - 10523317
Alignment:
Q  218 atactccctccgttcctatatgtaccccct-ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||||||||||| | | ||||||  |||| |||||||||||| |||| |||||||||||| | |||||| ||||||||||| |||| | ||||||||||    
T  10523418 atactccctccgtccttttatgtaagccctcttgcttttttcatattttttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatatt 10523319  T
Q  317 ac 318  Q
    ||    
T  10523318 ac 10523317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 15898606 - 15898507
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| | ||||||||  |||||||||| |||| ||| ||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||    
T  15898606 tactccctccgtccatatatgtaaaccccctttgcatttt-cacttttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 15898508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 7510591 - 7510667
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||  |||||||||||| |||||||||||| |||||||| ||||||||| | |||| | ||||||||||||    
T  7510591 ccccctttgtatttttcacattttttaagaaaagttattagtgtaattaatgtgtatgttttgtgtgttaatattac 7510667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 35569122 - 35569047
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||| | |||||||||||| |||||||||||| | |||||| ||||||||||| |||||| | |||||||||||    
T  35569122 ccctttacatttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattact 35569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 3247387 - 3247317
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||  |||||| ||||| ||||| |||| ||||||||||||||    
T  3247387 ttgcctttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaatattac 3247317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 10933997 - 10934067
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| || ||||| ||||| |||||| ||||||||||| |||| ||||||||||||||    
T  10933997 ttgcctttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaatattac 10934067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 16054165 - 16054244
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    ||||||| |||||||||||||||||||| ||||||   | ||||| |||||||||||| |||| | ||||||||||||||||    
T  16054165 aagaaatgaaataaattttgttattttttatgaaa--ttttgtgttttttctataatatccttgaccatttattattttatt 16054244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaac 365  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 18729583 - 18729648
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| ||||||||| || || ||||| |||||||||||||||| | |||||||||||    
T  18729583 ttttttcacatttcttaagaaaaattatttgtgtaattaatgtgtctattttgtgtgttaatatta 18729648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 25690808 - 25690735
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||||| ||||||||| | |||| | |||||||||    
T  25690808 ccccctttgctttgttcacatttcttaagaaaagttgtcggtgtaattaatgtgtatgttttgtgtgttaatat 25690735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 29866185 - 29866250
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||||| |||| | ||||||||||||    
T  29866185 tttttcacatttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatattac 29866250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 32067781 - 32067889
Alignment:
Q  212 aaaataatactccctccgttcctatatgtaccccctttg--cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgt 309  Q
    ||||| ||||| |||||||  |||||||||  |||||||  ||||||| |||||| ||||||||| | ||||||| | || ||||||||||||| | |||    
T  32067781 aaaatcatacttcctccgtctctatatgtaagccctttgtactttttttacatttcttaagaaaaatagttagtgcaattcatgtgtctattttgtgtgt 32067880  T
Q  310 taatattac 318  Q
    |||||||||    
T  32067881 taatattac 32067889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 36177288 - 36177353
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||| |||||||||||| | |||||| |||||||||||||||| | ||||||||||||    
T  36177288 ttttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatattac 36177353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 11796451 - 11796559
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||| ||||| | ||| ||||  ||||||||||||| ||   |||||||||| |||| |||||||||||||||||||||| | | ||||| | |    
T  11796451 tactccctccttttcacactacttgtcatttttgaagaaattacagataccaagaaattaaattaattttgttatttttgatgaaattctatgtgtttgt 11796550  T
Q  416 tctataata 424  Q
    |||||||||    
T  11796551 tctataata 11796559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 4378132 - 4378178
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatg 293  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||    
T  4378132 tttgcttttttcacatttcttaaaaaaagttgttagtgtaattaatg 4378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 34877657 - 34877727
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||| ||||| |||||| ||||| ||||| |||| | ||||||||||||    
T  34877657 ttgcctttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaatattac 34877727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 444
Target Start/End: Complemental strand, 1056507 - 1056431
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||  ||||||||||||||||||| |||||| | | ||||| |||||||||||||  || ||||||||||||||    
T  1056507 aagaaattgaataaattttgttatttttaatgaaattctttgtgt-ttttctataatactattgatcatttattattt 1056431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 16969361 - 16969434
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| || |||||||||||| |||| |||| |||||||| || |||||||||||| ||| | |||||||||||    
T  16969361 cccttagcctttttcacattttttaacaaaaattgttagtataattaatgtgtctaatttgtttgttaatatta 16969434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 20946078 - 20946147
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| ||||||| |||| |||||||| |||||||||| | |||| ||||||||||| | |||||||||||    
T  20946078 ttgcatttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatatta 20946147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 20976409 - 20976353
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    |||||||| ||||||||| |||| ||||||||| |||| |||||| |||||||||||    
T  20976409 ccccctttacttttttcatatttcttaagaaaatttgtcagtgtaattaatgtgtct 20976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 31742730 - 31742786
Alignment:
Q  117 gtgatgatgagagaggtattgtactaattaattgtttctgctattgcttttaatgtc 173  Q
    ||||||||||||||| |||||||  |||||||| |||| ||||||||||||| ||||    
T  31742730 gtgatgatgagagagttattgtagcaattaattatttccgctattgcttttagtgtc 31742786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 4745113 - 4745188
Alignment:
Q  244 ccctttgcttttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||||| || ||||||||| ||||||| | ||||||||| |||||| |  |||||||||||    
T  4745113 ccctttgcatttttcacatttttttaagaaaagtagttagtgcaattaatgtgtttattttgtgggttaatattac 4745188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 15967222 - 15967155
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||| |||||||| |||||  ||||| ||||||||||| |||| | | ||||||||||    
T  15967222 cttttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatattac 15967155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 33862935 - 33862857
Alignment:
Q  241 accccctttgcttttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||| ||||||||||||| || ||||||| |||| |||||| ||||||||||| |||| |||  ||||||||||    
T  33862935 accccctttg-ttttttcacatttctttaagaaaaattgtcagtgtaattaatgtgtctgttttgtatactaatattact 33862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 41521185 - 41521248
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| |||||| ||||||||| ||||||||| | ||||| |||||||||| | |||||||||||    
T  41521185 tttttacattttttaagaaaaattgttagtgaaattaatatgtctattttgtgtgttaatatta 41521248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 555555 - 555608
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgt 309  Q
    |||| |||| |||||||||||| ||||| || |||||||||||| |||||||||    
T  555555 ttcatattttttaagaaaagttattagtataattaatgtgtctaatttatatgt 555608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 25017782 - 25017717
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| ||| |||||||| ||||| ||| || ||||||||||| |||| | ||||||||||||    
T  25017782 tttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatattac 25017717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 31642576 - 31642512
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||| |||| |||||| ||||||||||| |||| | ||||||||||||    
T  31642576 ttttacacatttattaaaaaaaattgtcagtgtaattaatgtgtct-ttttgtgtgttaatattac 31642512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 600769 - 600825
Alignment:
Q  261 atttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| ||||||||| ||||||||| | |||||||||||||| | | |||||||||||    
T  600769 atttcttaagaaaacttgttagtgcaattaatgtgtctattatgtgtgttaatatta 600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 10656582 - 10656651
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||||||||||||| ||||||||| |||||| || | ||||||||  |||||||| |||||| |||||    
T  10656582 tttgtttttttcacatttcttaagaaaaattgttaatgcaattaatgtg--tattttatgtgttaaaattac 10656651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 27798152 - 27798216
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||  |||| |||||| ||||| ||||| |||| | |||||||||||    
T  27798152 tttttcacattttttaagaaatattgtcagtgtaattaatttgtctgttttgtgtgttaatatta 27798216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 43453986 - 43454042
Alignment:
Q  261 atttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| |||| ||||||||||||| || ||||||||||  |||| |||||||||||||    
T  43453986 atttcttaaaaaaagttgttagtataattaatgtgtcagttttgtatgttaatatta 43454042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 313 - 452
Target Start/End: Complemental strand, 23045559 - 23045420
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23045559 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtg 23045460  T
Q  413 ttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  23045459 ttttctataatacccttaatcatttattatttcattttat 23045420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 40783934 - 40783798
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783934 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40783835  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40783834 tctataatacccttaatcatttattatttcattttat 40783798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 284330 - 284468
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  284330 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtg 284429  T
Q  413 ttttctataatacccttaatcatttattattttatttta 451  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  284430 ttttctataatacccttaatcatttattatttcatttta 284468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 315 - 452
Target Start/End: Original strand, 321625 - 321762
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  321625 ttactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 321724  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  321725 ttctataatatccttaatcatttattatttcattttat 321762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 24772183 - 24772050
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  24772183 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtatt 24772084  T
Q  415 ttctataatacccttaatcatttattattttatt 448  Q
    ||||||||||||||||| ||||||||||||||||    
T  24772083 ttctataatacccttaaccatttattattttatt 24772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 311 - 452
Target Start/End: Complemental strand, 47038132 - 47037993
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg 410  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  47038132 aatactactccatccgtttcaaaatacatgtccattttggagaaattgtactaactaagaaatcaaataaattttgttatttttgatgaaaatatgt--g 47038035  T
Q  411 tgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  47038034 tgttttctataatacccttaatcatttattatttcattttat 47037993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 317 - 448
Target Start/End: Complemental strand, 27211240 - 27211109
Alignment:
Q  317 actccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtttt 416  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||    
T  27211240 actccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaccaaataaattttgttatttttgaggaaattatatgtgtgtttt 27211141  T
Q  417 ctataatacccttaatcatttattattttatt 448  Q
    ||||||||||||||| ||||||||||||||||    
T  27211140 ctataatacccttaaccatttattattttatt 27211109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 323 - 440
Target Start/End: Original strand, 46771644 - 46771761
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaattaaataaattttgttatttttgatgaaattatgtgtgtgttttctataa 46771743  T
Q  423 tacccttaatcatttatt 440  Q
    ||||||||| ||||||||    
T  46771744 tacccttaaccatttatt 46771761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 23526240 - 23526368
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  23526240 tactccttccatttcaaaatacatgttcattttggagaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgttt 23526339  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||||||||||||||| ||||||||||||    
T  23526340 tctataatacccttaaccatttattattt 23526368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 336 - 448
Target Start/End: Original strand, 33082765 - 33082877
Alignment:
Q  336 acatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcat 435  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||    
T  33082765 acatgtctattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccat 33082864  T
Q  436 ttattattttatt 448  Q
    |||||||||||||    
T  33082865 ttattattttatt 33082877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 15512926 - 15512823
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15512926 atactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatat 15512827  T
Q  316 tact 319  Q
    ||||    
T  15512826 tact 15512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 28949109 - 28949006
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28949109 atactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatat 28949010  T
Q  316 tact 319  Q
    ||||    
T  28949009 tact 28949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 448
Target Start/End: Original strand, 1749305 - 1749439
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||  ||||||| ||||||||| |||||||  || ||||  || ||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  1749305 attactcgatccgttttaaaatacatttccatttaaaaaaaatcacagtaatcaagaaatcaaataaattttgttatttttgatgaaattatatgtgtgt 1749404  T
Q  414 tttctataatacccttaatcatttattattttatt 448  Q
    ||||||||||| | |||| ||||||||||||||||    
T  1749405 tttctataatagcattaaccatttattattttatt 1749439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 31305277 - 31305378
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||    
T  31305277 tactccctccgtccctatatgtaaaccccttttgcttttttcacatttattaagaaaagttgttggtgtaattaatgtgtctattttgtatgctaatatt 31305376  T
Q  317 ac 318  Q
    ||    
T  31305377 ac 31305378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 331 - 444
Target Start/End: Complemental strand, 52037382 - 52037271
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataataccctta 430  Q
    ||||||||||||||||||  |||||||||| || |||| ||| |||||||||||| ||||||||||| ||| ||  ||||||||||||||||||| ||||    
T  52037382 aaaatacatgtccattttagagaaattgcattatccaaaaaaccaaataaattttattatttttgataaaatta--tgtgtgttttctataatactctta 52037285  T
Q  431 atcatttattattt 444  Q
    | ||||||||||||    
T  52037284 accatttattattt 52037271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 444
Target Start/End: Complemental strand, 51065037 - 51064902
Alignment:
Q  312 atattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt 411  Q
    |||||||||| ||||||||| ||||| |||||||||| |||||||| |||  |||||| |||||||||||| |||| ||||||||||||| | | |||||    
T  51065037 atattactccctccgtttcacaatacttgtccattttaaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgt 51064938  T
Q  412 gttttctat---aatacccttaatcatttattattt 444  Q
     ||||||||   |||||||||| || ||||||||||    
T  51064937 tttttctataataatacccttactcgtttattattt 51064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 44335248 - 44335349
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||| ||||||||| |||||| ||||||||||| |||| | |||||||||    
T  44335248 atactccctccgttcctatatgtaaaccccctttg-ttttttcacatttcttaataaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 44335346  T
Q  316 tac 318  Q
    |||    
T  44335347 tac 44335349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 1838053 - 1837975
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttat 447  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||  |||||||||||||||    
T  1838053 aagaaatcaaataaattttgttatttttgatgaaatta--tgtgttttttctataatacccttacccatttattattttat 1837975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 2342889 - 2342964
Alignment:
Q  243 cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||||||| ||||||||| |||||||| || |||||||||||||||| | ||||||||||||    
T  2342889 cccctttgcttttttcacattttttaagaaaaattgttagtttacttaatgtgtctattttgtgtgttaatattac 2342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 23982738 - 23982636
Alignment:
Q  217 aatactccctccgttcctatatgtac--cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    |||||||||||||| ||||||||||   ||||||||| |||||||||||| |||||||||||||| | |||| ||||||||||| |||| | ||||||||    
T  23982738 aatactccctccgtccctatatgtaagtcccctttgcatttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaata 23982639  T
Q  315 tta 317  Q
    |||    
T  23982638 tta 23982636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 4813606 - 4813505
Alignment:
Q  219 tactccctccgttcctatatgtaccccc--tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||| ||| ||||||| || ||||  |||||||||||||||||| |||||||||||||||| || | |||||||||||||||| | ||||||||||    
T  4813606 tactcccttcgtccctatatataacccccttttgcttttttcacatttcttaagaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatatt 4813507  T
Q  317 ac 318  Q
    ||    
T  4813506 ac 4813505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 38680468 - 38680534
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  38680468 cttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatatta 38680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 8984807 - 8984703
Alignment:
Q  217 aatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||| || ||||||||||  || ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||| |||| | ||||||||    
T  8984807 aatactccctctgtccctatatgtaagcctcctttgcatttttcacattttttaaggaaaattgttagtgtaattaatgtgtctgttttgtgtgttaata 8984708  T
Q  315 ttact 319  Q
    |||||    
T  8984707 ttact 8984703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 30898677 - 30898606
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||||||||| |||||| ||||||||||||    
T  30898677 tttgcttttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattac 30898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 438
Target Start/End: Original strand, 3657125 - 3657199
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcattta 438  Q
    ||||||||||||||||||||||||||||||| |||||| | ||| ||| |||||||||||| |||||| ||||||    
T  3657125 accaagaaatcaaataaattttgttatttttaatgaaattttgtatgttttttctataataaccttaaccattta 3657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 13723595 - 13723521
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||| | | ||||||||||    
T  13723595 ccctttgcatttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatattac 13723521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 15179369 - 15179470
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||  ||| ||||||||||  |||| |||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||  || ||||||    
T  15179369 tactcccatcgtccctatatgtaaaccccatttgcttttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgcgtaaatatt 15179468  T
Q  317 ac 318  Q
    ||    
T  15179469 ac 15179470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 30336049 - 30336119
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||||||||||||| | ||||||||||||    
T  30336049 ttgcttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatattac 30336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 31004012 - 31003935
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||   |||||| |||||| ||||||| | ||||||||||||||||||| ||||||||||||    
T  31004012 accaagaaatcaaataaatttt---atttttaatgaaagtatgtgtattttttctataatacccttaaccatttattattt 31003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 40261549 - 40261420
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg-tgtt 414  Q
    |||||| ||||||||| |||||||||   ||||||  || || |||  |||||||||||||||||||||||||| ||||||||||| |  ||||| | ||    
T  40261549 tactccctccgtttcacaatacatgttgcttttgagaaatttacacataccaagaaatcaaataaattttgttaattttgatgaaattgcgtgtgttttt 40261450  T
Q  415 ttctataatacccttaatcatttattattt 444  Q
    |||||||||| | |||| ||||||||||||    
T  40261449 ttctataatatcattaaccatttattattt 40261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 15911655 - 15911595
Alignment:
Q  258 cacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  15911655 cacatttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattac 15911595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 28723756 - 28723696
Alignment:
Q  258 cacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  28723756 cacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 28723696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 51996912 - 51997015
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcaca-tttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||| ||||||||||  ||||||||||| |||||||| ||| |||||||||||||| |||||| ||||| ||| | |||| | ||||||||    
T  51996912 atactccctccgtccctatatgtaaaccccctttgctattttcacaatttcttaagaaaagttgtcagtgtaattaatttgtatgttttctgtgttaata 51997011  T
Q  315 ttac 318  Q
    ||||    
T  51997012 ttac 51997015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 7765072 - 7765147
Alignment:
Q  375 aaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatttt 450  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||  |||||||| ||| |||||||||||| |||||    
T  7765072 aaataaattttgttatttttggtgaaattatatgtgtgttttccgtaatacccataaccatttattatttaatttt 7765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 20564764 - 20564835
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||||||||| ||||||||||||| |||||||  ||||||||||| ||||| ||||||||||||    
T  20564764 tttgcatttttcacatttgttaagaaaagttgatagtgtaactaatgtgtctactttatgtgttaatattac 20564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 41959076 - 41959131
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  41959076 attactccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaag 41959131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 5085202 - 5085132
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  5085202 ttgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 5085132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 27531055 - 27531160
Alignment:
Q  216 taatactccctccgttcctatatgtacc--ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||||||||||||| ||| ||||||    |||||||| |||||||||||| |||||||||||||| ||| || ||||||||| | |||| | |||||||    
T  27531055 taatactccctccgtccctgtatgtaagttccctttgcatttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaat 27531154  T
Q  314 attact 319  Q
    ||||||    
T  27531155 attact 27531160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 32047432 - 32047502
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||| | |||| | ||||||||||||    
T  32047432 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattac 32047502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 3943060 - 3943113
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  3943060 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 3943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 9588670 - 9588723
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9588670 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 9588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 13985044 - 13984991
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  13985044 tactccatccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 13984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 16582528 - 16582593
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  16582528 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 16582593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 25269372 - 25269437
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| ||||||  |||||||||| |||||| ||||||||||||    
T  25269372 tttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatattac 25269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 32152153 - 32152218
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||| ||| | |||||||||||||||| | ||||||||||||    
T  32152153 tttttcacatttcttaagaaaagttgttggtgcaattaatgtgtctattttgtgtgttaatattac 32152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 444
Target Start/End: Original strand, 52478016 - 52478094
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||||||||||||||||||   | ||||| |||||||||||| ||||||  |||||| ||||    
T  52478016 accaagaaatcaaataaattttgttatttttgatgaaa--ttttgtgttttttctataataaccttaaaaatttatcattt 52478094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 31808079 - 31808015
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| || || |||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  31808079 ttttcacacttcttgagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 31808015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 52141321 - 52141219
Alignment:
Q  219 tactccctccgttcctatatgtaccccc--tttgcttttttcacatttattaagaaaagttgttagtgtagttaat--gtgtctattttatatgttaata 314  Q
    |||||| ||||| |||||||||| || |  |||||||||||||||||| ||||||||| || |||||||| |||||  ||||||||||| | ||||||||    
T  52141321 tactccatccgtccctatatgtaacctccatttgcttttttcacattttttaagaaaaattattagtgtaattaatgcgtgtctattttgtgtgttaata 52141222  T
Q  315 tta 317  Q
    |||    
T  52141221 tta 52141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 27143239 - 27143160
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgtgtg-tgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||||||||||| |||| |  ||| | | ||||||||||||  ||||||||||||||||||    
T  27143239 caagaaatcaaataaattttgttatttttgaggaaattccgtgagtttttttctataatattcttaatcatttattattt 27143160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 48721978 - 48721911
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||| |||||||||| ||| |||||| ||||||||||| |||| | ||||||||||||    
T  48721978 cttttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 48721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 3143393 - 3143463
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||| |||||||||||||| | |||| |||||||||||  ||| | ||||||||||||    
T  3143393 ttgcttttttcacatttcttaagaaaagttgtcattgtaattaatgtgtctgctttgtgtgttaatattac 3143463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 33231830 - 33231900
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||| ||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  33231830 ttgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 33231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 25258325 - 25258390
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| ||||||||||||||||||| | |||||||||||||||||| | || |||||||    
T  25258325 tttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgatattac 25258390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 34696991 - 34696926
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||| ||||| |||| | ||||||||||||    
T  34696991 tttttcacattttttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattac 34696926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 441
Target Start/End: Complemental strand, 40562797 - 40562733
Alignment:
Q  376 aataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttatta 441  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||| |||| |||||||||    
T  40562797 aataaattttgttatttttgat-aaattatatatgtgttttctataataccattaaccatttatta 40562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 318
Target Start/End: Original strand, 50692369 - 50692469
Alignment:
Q  220 actccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||| || ||||||| ||  ||||||||||  ||||||||||| |||||||||||||| | || | |||||||||||||||| | ||||| |||||    
T  50692369 actccctcagtccctatatataagccccctttgcccttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtatta 50692468  T
Q  318 c 318  Q
    |    
T  50692469 c 50692469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 3072146 - 3072198
Alignment:
Q  265 attaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||||||||||    
T  3072146 attaagaaaagttgttagtgcaattaatgtgtttattttatgtgttaatatta 3072198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 10842287 - 10842374
Alignment:
Q  218 atactccctccgttcctatatgtaccccc--tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    ||||||||| ||| ||||||| || ||||  ||| |||||||||||||| |||||||||||||||| || | ||||| ||||||||||    
T  10842287 atactcccttcgtccctatatataacccccttttacttttttcacatttcttaagaaaagttgttaatgcaattaatatgtctatttt 10842374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 44395531 - 44395595
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||| |||||||| ||||| |||||| ||||| ||| |||||||| ||||||||||||    
T  44395531 ttttcacatttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattac 44395595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 32144300 - 32144371
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||||| |||||| ||||||||||||||| ||| | |||||||||||||||| |  |||||||||||    
T  32144300 tttgcattttttacatttcttaagaaaagttgttggtgcatttaatgtgtctattttgtgcgttaatattac 32144371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 444
Target Start/End: Complemental strand, 34459000 - 34458872
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaag-aaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    ||||||| ||||||||| ||||| ||||  ||||  || ||||| |||  ||||||||||||||||||||||  ||||||| ||||||   | ||||| |    
T  34459000 ttactccatccgtttcacaatacttgtcgtttttttaggaaattacacataccaagaaatcaaataaatttttctattttttatgaaa--ttctgtgttt 34458903  T
Q  414 tttctataatacccttaatcatttattattt 444  Q
    ||||||||||| ||||| | |||||||||||    
T  34458902 tttctataataaccttactaatttattattt 34458872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 41737114 - 41737185
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||| ||||| || ||||||||||||||||||||| ||||  |||||||||| | ||||||||||||    
T  41737114 tttgcatttatcacacttcttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattac 41737185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 46495270 - 46495368
Alignment:
Q  221 ctccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||| | ||||||||  || |||||| ||||||||||||| | || |||| |||| |||||| ||||||||||| |||| | |||||||||||    
T  46495270 ctccctccgtccatatatgtaaacctcctttgtttttttcacatttttaaaaaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 46495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 18396749 - 18396803
Alignment:
Q  370 aaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataata 424  Q
    |||| |||||||||||||||||||| |||||| ||||||||  ||||||||||||    
T  18396749 aaattaaataaattttgttattttttatgaaattatgtgtggtttttctataata 18396803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 28334323 - 28334273
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| ||||    
T  28334323 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgtttt 28334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 35366098 - 35366028
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| | |||||||||||    
T  35366098 tttgcttttttcatatttcttactaaaagttgttagtgtaagtaatgtatctattttgtgtgttaatatta 35366028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 47754751 - 47754685
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||| |||| |||| ||||||||| | |||||||||||||||| | ||||||||||||    
T  47754751 tttttttacatttcttaaaaaaaattgttagtgcaattaatgtgtctattttttgtgttaatattac 47754685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 1168369 - 1168414
Alignment:
Q  324 ccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||    
T  1168369 ccgtttcaaaatacatgtcgtttttgaagaaattgcagtaaccaag 1168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 44227848 - 44227889
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  44227848 tactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 6282469 - 6282533
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||| |||  |||||||| ||||||||  | |||||||||||||||||| |||||||||||    
T  6282469 tttttcacgtttcataagaaaaattgttagtacaattaatgtgtctattttatgtgttaatatta 6282533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 28679928 - 28679865
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||| ||||||||||| || | |||||||||||||||| | |||||||||||    
T  28679928 tttttcacattt-ttaaaaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatatta 28679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 31061662 - 31061603
Alignment:
Q  384 ttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||| |||||| ||||||||| ||||| ||||||||| ||| ||||||||||||    
T  31061662 ttgttattttttatgaaattatgtgtgttttttccataataccc-taaccatttattattt 31061603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 41959857 - 41959809
Alignment:
Q  309 ttaatattactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| |||||| ||||||||||||||||||||||||||  |||||||    
T  41959857 ttaataatactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 47071044 - 47071004
Alignment:
Q  278 gttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  47071044 gttagtgtaattaatgtgtctattttatgtgttaatattac 47071004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 47643529 - 47643580
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    |||||||||||| |||||||| |||||||||||||| |||||| |||||||||    
T  47643529 ccctttgctttt-tcacatttcttaagaaaagttgtcagtgtaattaatgtgt 47643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 399
Target Start/End: Complemental strand, 14351989 - 14351954
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatga 399  Q
    ||||||||| ||||||||||||||||||||||||||    
T  14351989 accaagaaaacaaataaattttgttatttttgatga 14351954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 23393621 - 23393570
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||| |||| |||||||||||||||| |||| ||||||| ||||||||    
T  23393621 ttttttcatattttttaagaaaagttgttaatgtaattaatgtatctatttt 23393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 29302557 - 29302494
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| |||||||||||||| |||||| | ||||| | | |||| ||||||||||||    
T  29302557 tttttcacatttcttaagaaaagttgtcagtgtaatcaatgtatttgttttgtatgttaatatt 29302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 3143842 - 3143792
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    ||||||| || | ||||||||||||| ||||||| ||||||||||||||||    
T  3143842 tttttcatatgtcttaagaaaagttgatagtgtaattaatgtgtctatttt 3143792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 4818023 - 4817969
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    ||||||||| ||||||||||||| ||||||||||||||  ||||| ||| |||||    
T  4818023 ccccctttgtttttttcacatttcttaagaaaagttgtcggtgtaattattgtgt 4817969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 4829823 - 4829769
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    ||||||||| ||||||||||||| ||||||||||||||  ||||| ||| |||||    
T  4829823 ccccctttgtttttttcacatttcttaagaaaagttgtcggtgtaattattgtgt 4829769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 10160709 - 10160759
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    |||| |||||||||||| |||||||||||| | |||||| |||||||||||    
T  10160709 ttgcctttttcacatttcttaagaaaagttatcagtgtaattaatgtgtct 10160759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 29140767 - 29140697
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||   ||||| ||||||||||| |||| | | ||||||||||    
T  29140767 ttgcctttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaatattac 29140697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 40261592 - 40261654
Alignment:
Q  255 tttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||| ||| ||||||| ||||||| | ||||||||| |||||| | |||||||||||    
T  40261592 tttcacatttcttatgaaaagtagttagtgcaattaatgtgtttattttgtgtgttaatatta 40261654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 44228270 - 44228228
Alignment:
Q  327 tttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||||||||||||||||||| |||||||||  ||||||||    
T  44228270 tttcaaaatacatgtccattttggagaaattgctgtaaccaag 44228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 13352832 - 13352893
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||| |||||||| || ||||||  | ||||||||||| |||||| |||||||||||    
T  13352832 ttcacatttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatatta 13352893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 13698596 - 13698649
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||||| ||||| ||| ||||||   |||||||||||||    
T  13698596 ttaagaaaagttgttagtgtaattaatatgtttattttgcgtgttaatattact 13698649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 16395648 - 16395591
Alignment:
Q  261 atttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||| ||| |  ||||| |||||||||||||||| ||||||||||||||    
T  16395648 attttttaagaaatgttatcggtgtaattaatgtgtctattttgtatgttaatattac 16395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 25929114 - 25929240
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| || |||||| ||||| | ||  |||||||||| || |||  ||||| |||| ||||||||||||||| ||||||| |||   | ||||| |||    
T  25929114 tactccatctgtttcacaatacttatcgcttttgaagaatttacacataccaaaaaattaaataaattttgttaattttgattaaa--ttctgtgttttt 25929211  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    ||||  ||| |||||| ||||||||||||    
T  25929212 tctacgatatccttaaccatttattattt 25929240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 286
Target Start/End: Complemental strand, 35001378 - 35001345
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgta 286  Q
    ||||||||||||||||||||||||||| ||||||    
T  35001378 tttttcacatttattaagaaaagttgtcagtgta 35001345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 44163226 - 44163291
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| |||| ||||||| | |||||| ||||||||| | |||| | |||||||||||    
T  44163226 ttttttcacatttcttaaaaaaagttatcagtgtaattaatgtgtttgttttgtgtgttaatatta 44163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 36084965 - 36085029
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||| || | |||||| ||||||| ||| |||| | |||||||||||    
T  36084965 tttttcacattttttaagaaaaattatcagtgtaattaatgtatctgttttgtgtgttaatatta 36085029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 40564293 - 40564241
Alignment:
Q  330 caaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaat 382  Q
    ||||||| |||||||||||| | |||| ||| ||||||||||| |||||||||    
T  40564293 caaaatatatgtccattttggaaaaatcgcagtaaccaagaaaccaaataaat 40564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 43189102 - 43189165
Alignment:
Q  257 tcacatttattaagaaaagttgttagtgtagtta--atgtgtctattttatatgttaatattac 318  Q
    ||||| || ||||||||||||||||||| | |||  || |||||||||| ||||||||||||||    
T  43189102 tcacaattcttaagaaaagttgttagtgcaattataatatgtctattttgtatgttaatattac 43189165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 2e-62; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 315 - 452
Target Start/End: Original strand, 8626481 - 8626618
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8626481 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 8626580  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||| |||||||    
T  8626581 ttctataatacccttaatcatttattatttcattttat 8626618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 1605579 - 1605715
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1605579 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 1605678  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1605679 tctataatacccttaatcatttattatttcattttat 1605715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 29260192 - 29260328
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29260192 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 29260291  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29260292 tctataatacccttaatcatttattatttcattttat 29260328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 30734753 - 30734624
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 30734654  T
Q  423 tacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||| |||||||    
T  30734653 tacccttaatcatttattatttcattttat 30734624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 13757215 - 13757344
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757215 tccgtttcaaaatacatgtccattttggagaaattacactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 13757314  T
Q  423 tacccttaatcatttattattttattttat 452  Q
    |||||||||||| ||||||||| |||||||    
T  13757315 tacccttaatcaattattatttcattttat 13757344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 7761301 - 7761435
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||    
T  7761301 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaataaattttgttatttttgatgaaaata--tgtgtgttt 7761398  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7761399 tctataatacccttaatcatttattatttcattttat 7761435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 331 - 450
Target Start/End: Complemental strand, 31559998 - 31559879
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataataccctta 430  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31559998 aaaatacatgtccattttggagaaattgcattaaccaaaaaatcaaataaattttgttatttttgatgaaaatatgtgtatgttttctgtaataccctta 31559899  T
Q  431 atcatttattattttatttt 450  Q
    |||||||||||||| |||||    
T  31559898 atcatttattatttcatttt 31559879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 15064971 - 15064843
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgttt 15064872  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    | |||| ||||||||| ||||||||||||    
T  15064871 tttatactacccttaaccatttattattt 15064843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 331 - 444
Target Start/End: Original strand, 8235639 - 8235752
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataataccctta 430  Q
    ||||||||||| |||||||||||||||||| |||||||||||  ||||||| |||||||||||| |||| | ||||||||||||||||||||||||||||    
T  8235639 aaaatacatgtacattttgaagaaattgcagtaaccaagaaacgaaataaaatttgttattttttatgatattatgtgtgtgttttctataataccctta 8235738  T
Q  431 atcatttattattt 444  Q
    ||||||||||||||    
T  8235739 atcatttattattt 8235752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 323 - 431
Target Start/End: Complemental strand, 30734878 - 30734772
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  30734878 tccgtttcaaaatacatgtccattttgaagaaattgcagtaacaaaaaaatcaaataaattttgttatttttgatgaaatta--tgtgtgttttctataa 30734781  T
Q  423 tacccttaa 431  Q
    |||||||||    
T  30734780 tacccttaa 30734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 19838890 - 19838993
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19838890 atactccctccgtccctatatgtaatccccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatat 19838989  T
Q  316 tact 319  Q
    ||||    
T  19838990 tact 19838993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 4129433 - 4129563
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||||||||||||||||| |||| |||| |||||||||| |||||||        |||||||||||||||||| ||||||||||||||||||    
T  4129433 attactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgt 4129524  T
Q  414 tttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  4129525 tttctataatacccttaaccatttattatttcattttat 4129563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 17942443 - 17942581
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgtt--atttttgatgaaaatatgtgtgtgt 413  Q
    |||||| | ||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||  |||| ||  ||||||||||||| |||||| ||||    
T  17942443 tactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaaccaagaaaccaaatatttttttttttatttttgatgaaattatgtgcgtgt 17942542  T
Q  414 tttctataatacccttaatcatttattattttattttat 452  Q
    | |||||||||||||||| |||||||||||| |||||||    
T  17942543 tctctataatacccttaaccatttattatttcattttat 17942581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 22410988 - 22410888
Alignment:
Q  219 tactccctccgttcctatatgtac-cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||| | | ||||||||  ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  22410988 tactccctccatccttatatgtaaacccctttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatatta 22410889  T
Q  318 c 318  Q
    |    
T  22410888 c 22410888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 15981754 - 15981855
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||||||||||||||||||| |  | |||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||    
T  15981754 tactccctccgttcctatatgcaagctccctttgtatttttcacatttcttaagaaaagttgttggtgtaattaatgtgtctgttttgtgtgttaatatt 15981853  T
Q  317 ac 318  Q
    ||    
T  15981854 ac 15981855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 31946030 - 31945957
Alignment:
Q  245 cctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  31946030 cctttccttttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattac 31945957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 21277659 - 21277589
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcattta 438  Q
    |||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||| |||||    
T  21277659 aagaaatcaaataaattttgttattttttatgaaaatttatgtgt-ttttctataatacccttaattattta 21277589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 1763803 - 1763875
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||| |||| |||||||||||||| |||||| ||||||||||| |||| | |||||||||||||    
T  1763803 tttgcttttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattact 1763875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 444
Target Start/End: Original strand, 3798151 - 3798231
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||| ||||||||||||||||||||||||| |||||  ||| ||||| |||||||||| |||||||  ||||||||||||    
T  3798151 accaaaaaatcaaataaattttgttatttttcatgaagttatttgtgttttttctataacacccttacacatttattattt 3798231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 3888051 - 3887987
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||| | ||||||||||||    
T  3888051 ttttcacatttcttaagaaaagttgttattgcagttaatgtgtctattttgtgtgttaatattac 3887987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 16327083 - 16327184
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||| ||||||||||||||  || ||||||  |||||||||||| |||||||||||||| | | || ||||||||||| |||| | ||||||||||    
T  16327083 tactccctgcgttcctatatgtaagcctcctttgtatttttcacatttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatatt 16327182  T
Q  317 ac 318  Q
    ||    
T  16327183 ac 16327184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 16350481 - 16350582
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||| ||||||||||||||  || ||||||  |||||||||||| |||| ||||||||| |||||| |||||| |||| |||| | ||||||||||    
T  16350481 tactccctgcgttcctatatgtaagcctcctttgtatttttcacattttttaataaaagttgtcagtgtaattaatgagtctgttttgtgtgttaatatt 16350580  T
Q  317 ac 318  Q
    ||    
T  16350581 ac 16350582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 11302851 - 11302916
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||||||| || ||||||||||| |||| | ||||||||||||    
T  11302851 tttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatattac 11302916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 11370711 - 11370635
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatt 443  Q
    ||||||||||||||||||||||||||||||||| | |   ||||| |||| |||||||| ||||| |||||||||||    
T  11370711 aagaaatcaaataaattttgttatttttgatgatattcattgtgttttttttataatactcttaaccatttattatt 11370635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 14286989 - 14287124
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||| ||||| |||   ||||||  ||||| |||   |||| ||||||||||||||||||||||||| |||||| | ||||  | |||    
T  14286989 tactccctccgtttcacaatacttgtagtttttgagaaaattacacatgccaataaatcaaataaattttgttattttttatgaaattctgtg-cttttt 14287087  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||  | |||||||||| |||||||    
T  14287088 tctataatacccttacccctttattatttcattttat 14287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 28238431 - 28238359
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||| |||| |||| |||||||| || |||||||||||||||| | ||||||||||||    
T  28238431 ctttgcttctttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattac 28238359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 31536008 - 31536072
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| |||||| ||||||||||||||||||||| ||||| | |||||||||| |||||||||||    
T  31536008 ttttttacatttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatatta 31536072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 3729384 - 3729450
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||| ||||||||| ||||| ||||| |||||||||||||||| | ||||||||||||    
T  3729384 tttttttacatttcttaagaaaaattgttggtgtaattaatgtgtctattttgtgtgttaatattac 3729450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 9461289 - 9461355
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||| | |||||| |||||||||||||    
T  9461289 tttttcacatttattaagaaatgttgtcggtgtaattaatgtgtttgttttatgtgttaatattact 9461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 401
Target Start/End: Original strand, 1814595 - 1814680
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    |||||| ||||||||| ||||| ||||  ||||||  ||||| |||  | |||||||||||||||| |||||||||||||||||||    
T  1814595 tactccatccgtttcacaatacttgtcgcttttgagaaaattacacatatcaagaaatcaaataaactttgttatttttgatgaaa 1814680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 5895727 - 5895792
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||| |||| | | ||||||||||    
T  5895727 tttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatattac 5895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 12514695 - 12514630
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||| | ||||||||| ||||||||| | |||||||||||||||| | ||||||||||||    
T  12514695 tttttcacatattttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattac 12514630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 19996768 - 19996715
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  19996768 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 19996715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 16186569 - 16186629
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||| |||| |||||||||    
T  16186569 tttttcacattttgtaagaaaagttattagtgtaattaatgtgtctgttttgtatgttaat 16186629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 4250768 - 4250703
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||| ||||||||| |||| |||||| ||||||||||| |||| | ||||||||||||    
T  4250768 ttttttacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 4250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 5604588 - 5604535
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttat 305  Q
    ||||||||  ||||||||| ||| |||||| |||||||||||||||||||||||    
T  5604588 ttttttcatttttattaagtaaatttgttaatgtagttaatgtgtctattttat 5604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 9428127 - 9428227
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||||||||||  |||||||||  | ||||||  ||||||||| ||| ||||||||||||| || | || ||||||| |||||||| | ||||||||||    
T  9428127 tactccctccgtctctatatgtagactccctttatttttttcacgtttcttaagaaaagttgctactataattaatgtatctattttgtgtgttaatatt 9428226  T
Q  317 a 317  Q
    |    
T  9428227 a 9428227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 10669396 - 10669319
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||||| |||||| |||||| || | |||| ||||||||| | |||||||||||||||| | ||||||||||||    
T  10669396 accctctttgttttttttacatttttttaaaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattac 10669319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 26860798 - 26860897
Alignment:
Q  345 ttttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||| |||||| |||  | ||||||||||||||| |||| |||||||||||||||   | ||||| | |||||||  |||||||| ||||||||||||    
T  26860798 ttttgaggaaattacacacatcaagaaatcaaataactttttttatttttgatgaaa--ttttgtgtttattctata--acccttaaccatttattattt 26860893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 31487492 - 31487407
Alignment:
Q  232 cctatatgtaccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||| | |||| |||||||||| ||||||| || | ||||||||||||  || ||||||||| |||||| | |||||||||||    
T  31487492 cctatatatcccccttttgctttttgcacatttcttgaaaaaagttgttagcataattaatgtgtatattttgtgtgttaatatta 31487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 27441763 - 27441819
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    ||||| |||| ||||||||||||||||||||| |||||  ||| |||||||||||||    
T  27441763 cccccattgcatttttcacatttattaagaaatgttgtctgtgcagttaatgtgtct 27441819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 33845505 - 33845469
Alignment:
Q  371 aatcaaataaattttgttatttttgatgaaaatatgt 407  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33845505 aatcaaataaattttgttatttttgatgaaattatgt 33845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 5084650 - 5084612
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaat 292  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  5084650 ttttcacatttcttaagaaaagttgttagtgtaattaat 5084612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 6791363 - 6791417
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    |||| |||||||||||||||||| |||| ||||||||| | |||| |||||||||    
T  6791363 ccccttttgcttttttcacatttcttaaaaaaagttgtcaatgtaattaatgtgt 6791417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 11081892 - 11081942
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||||| | ||||||||||||||||||||| ||||| | ||||||||    
T  11081892 tttttcacatatcttaagaaaagttgttagtgtaattaatatatctatttt 11081942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 30248563 - 30248624
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||| |||||||||||||| |||||| ||||||||| | |||| | ||||||||||||    
T  30248563 ttcacatttcttaagaaaagttgtaagtgta-ttaatgtgtttgttttgtgtgttaatattac 30248624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 31780120 - 31780186
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||| |||| |||| |||||||| || || | |||||||||||||||| |||||| ||||||||    
T  31780120 tttttcatatttcttaataaaagttgataatgcaattaatgtgtctattttgtatgttgatattact 31780186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 33758062 - 33758124
Alignment:
Q  255 tttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||||| |||||||  ||||| ||||||| |||||||||| || || |||||||    
T  33758062 tttcacatttattaaaaaaagttagtagtgaagttaatatgtctattttgtacgtgaatatta 33758124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 1514337 - 1514273
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| |||||||| |||||||||| | ||||| ||| |||||| ||||||||||||||    
T  1514337 tttttcatattttttaagaaa-gttgttagtgcaattaatatgtttattttgtatgttaatattac 1514273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 19996322 - 19996363
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 8644906 - 8644842
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||| ||||||||||||   | ||||| | |||||||| |||||||||||||    
T  8644906 tttttcacatttcttaaaaaaagttgttagcacaattaatatatctattttgtatgttaatatta 8644842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 344
Target Start/End: Complemental strand, 32672078 - 32672050
Alignment:
Q  316 tactccttccgtttcaaaatacatgtcca 344  Q
    |||||||||||||||||||||||||||||    
T  32672078 tactccttccgtttcaaaatacatgtcca 32672050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 8e-62; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 7146913 - 7147049
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7146913 tactccttccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 7147012  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    | ||||||||||||||||||||||||||| |||||||    
T  7147013 tttataatacccttaatcatttattatttcattttat 7147049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 2540201 - 2540072
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540201 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 2540102  T
Q  423 tacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||| |||||||    
T  2540101 tacccttaatcatttattatttcattttat 2540072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 315 - 452
Target Start/End: Original strand, 37345570 - 37345707
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  37345570 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcaccaaccaagaaaccaaataaattttgttatttttaatgaaaatatgtgtgtgtt 37345669  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||| |||||||    
T  37345670 ttctataatacccttaatcatttattatttcattttat 37345707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 11174500 - 11174364
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 11174401  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11174400 tctataatacccttaatcatttattatttcattttat 11174364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 40058580 - 40058444
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40058580 tactccctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40058481  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40058480 tctataatacccttaatcatttattatttcattttat 40058444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 3585451 - 3585586
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 3585550  T
Q  416 tctataatacccttaatcatttattattttatttta 451  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3585551 tctataatacccttaatcatttattatttcatttta 3585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 11646602 - 11646467
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  11646602 tactcccttcgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 11646503  T
Q  416 tctataatacccttaatcatttattattttatttta 451  Q
    ||||||||||||||||||||||||||||| ||||||    
T  11646502 tctataatacccttaatcatttattatttcatttta 11646467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 315 - 452
Target Start/End: Complemental strand, 43275675 - 43275540
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  43275675 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgt--gtgtt 43275578  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||| |||||||    
T  43275577 ttctataatacccttaatcatttattatttcattttat 43275540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 30999791 - 30999664
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgt--gtgttttctataa 30999694  T
Q  423 tacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||| |||||||    
T  30999693 tacccttaatcatttattatttcattttat 30999664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 40919006 - 40918872
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |  |||||||||    
T  40919006 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaaca--tgtgtgttt 40918909  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40918908 tctataatacccttaatcatttattatttcattttat 40918872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 314 - 451
Target Start/End: Original strand, 36068078 - 36068215
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  36068078 attactccctccgtttcaaaatacatgtccattttggaggaattgtactaaccaaaaaaccaaataaattttgttatttttaatgaaaatatatgtgtgt 36068177  T
Q  414 tttctataatacccttaatcatttattattttatttta 451  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  36068178 tttctataatacccttaatcattaattatttcatttta 36068215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 314 - 444
Target Start/End: Original strand, 27034995 - 27035124
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| |||| ||||||||||||||| ||||| ||||     
T  27034995 attactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttatttttgatgaaattatgtctgtg- 27035093  T
Q  414 tttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||| ||||||||||||    
T  27035094 tttctataatacccttaaccatttattattt 27035124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 43980727 - 43980627
Alignment:
Q  219 tactccctccgttcctatatgtaccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43980727 tactccctccgtccctatatgtacccccttttcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattac 43980628  T
Q  319 t 319  Q
    |    
T  43980627 t 43980627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 24962510 - 24962409
Alignment:
Q  219 tactccctccgttcctatatgtacc-ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24962510 tactccctccgtccctatatgtaattccctttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatatta 24962411  T
Q  318 ct 319  Q
    ||    
T  24962410 ct 24962409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 314 - 444
Target Start/End: Complemental strand, 20546566 - 20546438
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||| ||  |||||||    
T  20546566 attactccctccatttcaaaatatatgtccattttgaagaaattgcaacaatcaagaaattaaataaattttgttatttttgatgaaatta--tgtgtgt 20546469  T
Q  414 tttctataatacccttaatcatttattattt 444  Q
    ||| ||| ||||||||||  |||||||||||    
T  20546468 tttatatgatacccttaacaatttattattt 20546438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 28562428 - 28562550
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtg-tgttttctata 421  Q
    ||||||||||||||| ||||||||||||||||||| |||  |||||| |||||||||||| |||| ||||||||||||| | | |||| | |||||||||    
T  28562428 tccgtttcaaaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgtttttttctata 28562527  T
Q  422 atacccttaatcatttattattt 444  Q
    ||||||||| |||||||| ||||    
T  28562528 atacccttactcatttatgattt 28562550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 448
Target Start/End: Original strand, 35866616 - 35866746
Alignment:
Q  318 ctccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttc 417  Q
    |||||||||||||| ||||| |||||||||| ||||||||  |   |||||||||| | |||||| ||||||||||| |||||| | | ||||| |||||    
T  35866616 ctccttccgtttcacaatacttgtccattttaaagaaattatatataccaagaaattagataaatgttgttatttttcatgaaattctttgtgttttttc 35866715  T
Q  418 tataatacccttaatcatttattattttatt 448  Q
    |||||||||||||| ||||||||||||||||    
T  35866716 tataatacccttaaacatttattattttatt 35866746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 26878875 - 26878773
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||||||||  |||||||||  |||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||| | |||||||||    
T  26878875 atactccctccgtctctatatgtaaaccccctttgcctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatat 26878776  T
Q  316 tac 318  Q
    |||    
T  26878775 tac 26878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 13881178 - 13881103
Alignment:
Q  370 aaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtttt-ctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||||||||||||||||| | |||| || |||| ||||||||||||||||||||||||||||    
T  13881178 aaatcaaataaattttgttatttttgatgaaattgtgtgcgtttttttctataatacccttaatcatttattattt 13881103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 22590359 - 22590433
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| | |||||||||    
T  22590359 accccctttgcttttttcacatttcttaagaaaatttgttagtgcaattaatgtgtctattttttgtgttaatat 22590433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 31746551 - 31746450
Alignment:
Q  219 tactccctccgttcctatatgtaccccct--ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||| ||| | |||||||| |||||  ||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| | ||||||||||    
T  31746551 tactcccttcgtccttatatgtaacccctctttgcttttttcacatttcttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatatt 31746452  T
Q  317 ac 318  Q
    ||    
T  31746451 ac 31746450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 14577762 - 14577697
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  14577762 tttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattac 14577697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 216 - 301
Target Start/End: Complemental strand, 24276704 - 24276617
Alignment:
Q  216 taatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatt 301  Q
    ||||||||||||||| ||||||||||  ||| |||||| |||||||||||| |||| ||||||||||||| || ||||||||||||||    
T  24276704 taatactccctccgtccctatatgtaaaccctctttgcctttttcacatttcttaaaaaaagttgttagtataattaatgtgtctatt 24276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 34882628 - 34882730
Alignment:
Q  217 aatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    |||||||||||||||||||||| ||  |||| |||  ||||||||||||| ||||||||| |||||| || | |||||||||||||||| | ||||||||    
T  34882628 aatactccctccgttcctatatataatccccttttatttttttcacattttttaagaaaaattgttaatgcaattaatgtgtctattttgtgtgttaata 34882727  T
Q  315 tta 317  Q
    |||    
T  34882728 tta 34882730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 2562849 - 2562775
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||||||| |||||||||  ||| |||||| ||||||||||| |||| ||||||||||||||    
T  2562849 ccctttgcttttttcacatttcttaagaaaaactgtcagtgtaattaatgtgtctgttttgtatgttaatattac 2562775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 28326883 - 28326806
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||||||||||||||||||||||| |||||||   ||||| ||||||| |||||  |||||||||||    
T  28326883 accaagaaatcaaataaattttgttatttttgatgaaattatgtgt---ttttcaataatactcttaactatttattattt 28326806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 28567926 - 28568032
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt-gttttctata 421  Q
    ||||||||||||||| ||||||||||||||||||| |||  |||||  |||||||||||| |||| |||||| |||||| | | |||||  |||||||||    
T  28567926 tccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctata 28568025  T
Q  422 ataccct 428  Q
    |||||||    
T  28568026 ataccct 28568032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 428
Target Start/End: Original strand, 28575519 - 28575625
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt-gttttctata 421  Q
    ||||||||||||||| ||||||||||||||||||| |||  |||||  |||||||||||| |||| |||||| |||||| | | |||||  |||||||||    
T  28575519 tccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctata 28575618  T
Q  422 ataccct 428  Q
    |||||||    
T  28575619 ataccct 28575625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 369
Target Start/End: Complemental strand, 40486507 - 40486453
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  40486507 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 40486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 45278759 - 45278701
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  45278759 aatattactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 45278701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 40602162 - 40602085
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||||||| || ||||||||| |||||| | |||||||||||  ||||| |||||||||||||    
T  40602162 ccccctttgcttttttcacattttttcagaaaagttattagtgcaattaatgtgtcttatttatgtgttaatattact 40602085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 7172203 - 7172279
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| |||||||||||||||||| ||||||||| || || ||||| |||||||||||||||| | |||||||||||    
T  7172203 accccttttgcttttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatatta 7172279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 25888591 - 25888655
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  25888591 ttttttacatttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatatta 25888655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 16644151 - 16644084
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||| |||||| | |||||||||    
T  16644151 ttgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatattttgtgtgttaatat 16644084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 8697951 - 8697898
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  8697951 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 8697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 37956117 - 37956182
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  37956117 tttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 37956182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 41308014 - 41307961
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  41308014 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 41307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 45283930 - 45283826
Alignment:
Q  216 taatactccctccgttcctatatgtac-cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||| ||||||| ||||||||||  |||||||  |||||||| |||| ||||||||| || | | |||| ||||||||||| |||||| ||||||||    
T  45283930 taatacttcctccgtccctatatgtaagccccttttgttttttcaaatttcttaagaaaaattatcaatgtaattaatgtgtctgttttatgtgttaata 45283831  T
Q  315 ttact 319  Q
    |||||    
T  45283830 ttact 45283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 3006888 - 3006825
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||| |||| |||||||||||||||||| || ||||| |||||||||||| |||||||||||||    
T  3006888 ttcatatttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattact 3006825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 14906559 - 14906662
Alignment:
Q  216 taatactccctccgttcctatatgtaccccctttg-cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||||| ||| ||| || |||||||  |||||||||||||| || | ||||||| ||| |||| ||||| |||||||||| | ||||||||    
T  14906559 taatactccctccgtccctctatataaccccttttacttttttcacattttttcataaaagttattaatgtaattaatatgtctattttgtgtgttaata 14906658  T
Q  315 ttac 318  Q
    ||||    
T  14906659 ttac 14906662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 31673591 - 31673657
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||| ||||||||||||| | ||||| ||||||||| |||||| ||||||||||||||    
T  31673591 cttttttcacattttttaagaaaagttg-tggtgtaattaatgtgtttattttgtatgttaatattac 31673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 43191588 - 43191521
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||| |||||| |||||||||  ||||| | ||||||||||||||||||||| |||||||||||||    
T  43191588 tttttttacatttcttaagaaaaaatgttaatttagttaatgtgtctattttatgtgttaatattact 43191521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 57299 - 57233
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||| |||| | ||||||||||||    
T  57299 ttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattac 57233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 369
Target Start/End: Original strand, 10646599 - 10646645
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  10646599 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 10646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 25185021 - 25185091
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| ||||||  |||||||||| |||| | ||||||||||||    
T  25185021 ttgcctttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaatattac 25185091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 25198280 - 25198350
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| |||||| ||||||||| | |||| | ||||||||||||    
T  25198280 ttgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattac 25198350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 39151460 - 39151537
Alignment:
Q  370 aaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    |||||||||||| ||||||||||||||||||| ||||| | | ||||||||||||   || ||||||||||||||||||    
T  39151460 aaatcaaataaactttgttatttttgatgaaattatgtat-ttttttctataatataatttatcatttattattttatt 39151537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 14522714 - 14522649
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||| | |||| | ||||||||||||    
T  14522714 tttttcacatttcttaagaaaaattgttagtgtaattaatgtgtatgttttgtgtgttaatattac 14522649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 14739433 - 14739490
Alignment:
Q  261 atttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||||||||||||||  ||||| ||||||||| |||||||||||||||||||||    
T  14739433 attttttaagaaaagttgtccgtgtaattaatgtgtttattttatatgttaatattac 14739490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 43182528 - 43182593
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||| |||| ||| |||||||| ||| ||||||||| ||||||||||||| |||||||||||    
T  43182528 ttttttcaaattttttatgaaaagttattaatgtagttaacgtgtctattttatgtgttaatatta 43182593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 885451 - 885491
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgta 286  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  885451 ctttgcttttttcacatttattaagaaaagttgtcagtgta 885491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 24512277 - 24512213
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||||| |||| | |||||||||||    
T  24512277 tttttcacattttttaagaaaatttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 24512213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 30262635 - 30262583
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||||||||||    
T  30262635 ttaaaaaaagttgttagtgcaattaatgtgtctattttgtatgttaatattac 30262583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 452
Target Start/End: Original strand, 37510314 - 37510402
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||  |||||||||||||||||||| || ||| | | | | | ||||| |||||||||||||||||||| ||||| |||||||    
T  37510314 accaagaaactaaataaattttgttatttttaataaaattctttctattttttcaataatacccttaatcatttaatatttcattttat 37510402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 38761468 - 38761404
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||| |||| | |||||||||||    
T  38761468 tttttcatatttattaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatta 38761404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 40517699 - 40517801
Alignment:
Q  215 ataatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaa 312  Q
    |||||||||||| ||| | ||||||||  ||| |||||| |||||||||||| |||||||||||||| ||   ||| ||||||||| |||| | ||||||    
T  40517699 ataatactcccttcgtccttatatgtaagccctctttgcatttttcacattttttaagaaaagttgtcag---agtaaatgtgtctgttttgtgtgttaa 40517795  T
Q  313 tattac 318  Q
    ||||||    
T  40517796 tattac 40517801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 4274018 - 4273955
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| ||||||||  ||||||||||| ||||||||| | |||||| ||||||||||    
T  4274018 tttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaatatt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 1177266 - 1177201
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| |||||||||||| | |||||| ||||||||||| |||| ||| ||||||||||    
T  1177266 ttttttcacattttttaagaaaagttat-agtgtaattaatgtgtctgttttgtatattaatattac 1177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 15702248 - 15702298
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtc 297  Q
    ||||||||||||||  | |||||||||||||| ||||||||||||||||||    
T  15702248 tttgcttttttcactctaattaagaaaagttggtagtgtagttaatgtgtc 15702298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 37141717 - 37141787
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||| ||||||||| |||||| ||||||| ||| |||| | ||||||||||||    
T  37141717 ttgcatttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattac 37141787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 40790749 - 40790830
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    |||||||||||| |||  |||||  ||||||||  ||||||||||||| |||||||||||||| |||||| |||||| ||||    
T  40790749 tactccctccgtcccttaatgtaaaccccctttatttttttcacatttcttaagaaaagttgtcagtgtaattaatgcgtct 40790830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 45203746 - 45203819
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| ||||| |||||| ||||||||  || |||||| | |||||||||||||||| ||||||||||||||    
T  45203746 ccctttgcattttttacatttcttaagaaatttt-ttagtgcaattaatgtgtctattttgtatgttaatattac 45203819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 7772508 - 7772573
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||| |||||||||||||| | |||| ||||||||||| |||| | ||||||||||||    
T  7772508 ttttttacattttttaagaaaagttgtcattgtaattaatgtgtctgttttgtgtgttaatattac 7772573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 30906917 - 30906837
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgt--gtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||||||||| |||||| | |||  || | |||||||| | | |||||| ||||||||||||    
T  30906917 caagaaatcaaataaattttgttattttttatgaaattttgtgagttttttttctatgaaaaccttaaccatttattattt 30906837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 38770297 - 38770232
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| |||||| ||||||| |||||| ||||||||| |||||| | ||||||||||||    
T  38770297 tttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatattac 38770232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 16002833 - 16002769
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||  |||| | |||||||||||    
T  16002833 tttttcacattttttaagaaaagttgtctgtgtaattaatgtgtcagttttgtgtgttaatatta 16002769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 17933661 - 17933759
Alignment:
Q  215 ataatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaa 312  Q
    |||||||||| ||||||| | ||||||  ||||||||| |||||||||||||  |||||||| ||||   |||| |||||||||||||||| | ||||||    
T  17933661 ataatactccatccgttcttgtatgtaagccccctttg-ttttttcacatttcgtaagaaaaattgtcgatgtaattaatgtgtctattttgtgtgttaa 17933759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 409
Target Start/End: Complemental strand, 26629289 - 26629193
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcac-taaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgt 409  Q
    |||||||  ||||||||| ||||| |||   |||||| |||||| ||| |||  || ||||||||||||||||||||| |||||||||| |||||||    
T  26629289 attactctatccgtttcacaatacgtgttgcttttgaggaaattacacataataaaaaaatcaaataaattttgttatgtttgatgaaattatgtgt 26629193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 36437490 - 36437562
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||| ||||||| |||||||||  |||||||| | |||||||||||||||| | |||||| |||||    
T  36437490 ctttgccttttccacattttttaagaaaaaatgttagtgcaattaatgtgtctattttgtgtgttaacattac 36437562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 5191664 - 5191594
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||||||||| ||||||||| ||||||| | | ||||||||||| |||| | ||||||||||||    
T  5191664 tttgcatttttcacatttcttaagaaaaattgttag-gcaattaatgtgtctgttttgtgtgttaatattac 5191594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 14847032 - 14846966
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| ||||||||||||||  ||||| |||||||||||  ||| |  |||||||||||    
T  14847032 ttttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgctttgtgcgttaatattac 14846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 444
Target Start/End: Complemental strand, 10181074 - 10181006
Alignment:
Q  375 aaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||||| || ||| || || ||| |||| ||||||||| |||| ||||||||||||    
T  10181074 aaataaattttgttattttttataaaattacgtttgtttttt-tataataccgttaaccatttattattt 10181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 10396338 - 10396297
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgt 294  Q
    ||||||||||||||||||||||||||| | |||| |||||||    
T  10396338 tttttcacatttattaagaaaagttgtcaatgtaattaatgt 10396297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 24524096 - 24524125
Alignment:
Q  312 atattactccttccgtttcaaaatacatgt 341  Q
    ||||||||||||||||||||||||||||||    
T  24524096 atattactccttccgtttcaaaatacatgt 24524125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 444
Target Start/End: Complemental strand, 27564075 - 27564000
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||||||||| ||||||||||||| |||| | ||||||| | |||| ||||| ||||||||  |||||||||||    
T  27564075 aagaaatcaaataatttttgttattttt-atgagattatgtgt-ttttttttataacacccttaacaatttattattt 27564000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 37600998 - 37600937
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    |||||||||||| |||||||| ||||| ||| || |||||||||||  ||||| ||||||||    
T  37600998 tttttcacattttttaagaaatgttgtaagtataattaatgtgtctgatttatgtgttaata 37600937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 40337301 - 40337236
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||| |||||||| | ||| || ||||||||| | |||| ||||||||||||||    
T  40337301 tttttcacatttcttatgaaaagttatcagtataattaatgtgtatgttttgtatgttaatattac 40337236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 44255441 - 44255513
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||||||| |||||||||| ||| || ||| |||||||| || |||| | |||||||||||    
T  44255441 ccctttgctttt-tcacatttgttaagaaaagatgtgagcgtaattaatgtgccttttttgtgtgttaatatta 44255513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 7727456 - 7727392
Alignment:
Q  255 tttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||| ||||||||||||||| | ||| |||||||| ||| ||||||| ||| ||| |||||    
T  7727456 tttcacatatattaagaaaagttggtggtgcagttaatgagtccattttatgtgtcaatgttact 7727392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 12762856 - 12762904
Alignment:
Q  271 aaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||| || | |||||||||||||||| | |||||||||||||    
T  12762856 aaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattact 12762904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 344
Target Start/End: Complemental strand, 13217283 - 13217255
Alignment:
Q  316 tactccttccgtttcaaaatacatgtcca 344  Q
    |||||||||||||||||||||||||||||    
T  13217283 tactccttccgtttcaaaatacatgtcca 13217255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 35709181 - 35709145
Alignment:
Q  281 agtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  35709181 agtgtagttaatgtgtctagtttatgtgttaatatta 35709145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 45185377 - 45185313
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| ||||||||||||||   |||| | ||||||||| |||||| | |||||||||    
T  45185377 tttttcacatttcttaagaaaagttgtcgttgtaataaatgtgtctgttttatgtattaatatta 45185313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 169 - 40
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 422  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  169 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 70  T
Q  423 tacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||| |||||||    
T  69 tacccttaatcatttattatttcattttat 40  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 13364843 - 13364979
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13364843 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 13364942  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  13364943 tctataatacccttaatcatttattatttcattttat 13364979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 312 - 452
Target Start/End: Complemental strand, 46694391 - 46694251
Alignment:
Q  312 atattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt 411  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  46694391 atattactccctccgtttcaaaatacatgtcctttttggagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgt 46694292  T
Q  412 gttttctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  46694291 gttttctataatacccttaatcatttattatttcattttat 46694251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 313 - 452
Target Start/End: Original strand, 198852 - 198991
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtg 412  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  198852 tattactccctccgtttcaaaatacatgtccattttggagaaattgcactgaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtg 198951  T
Q  413 ttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  198952 ttttctataatacccttaatcatttattatttcattttat 198991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 315 - 452
Target Start/End: Complemental strand, 23088209 - 23088072
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23088209 ttactccctctgtttcaaaatatatgtctattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 23088110  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||| |||||||    
T  23088109 ttctataatacccttaatcatttattatttcattttat 23088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 3383076 - 3383212
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3383076 tactccttccgtttcaaaatatatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 3383175  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||||||||||| |||||||    
T  3383176 tctataatacccttaaacatttattatttcattttat 3383212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 316 - 451
Target Start/End: Complemental strand, 19241945 - 19241810
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  19241945 tactccctccgtttcaaaatacatgtccattttggtgaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 19241846  T
Q  416 tctataatacccttaatcatttattattttatttta 451  Q
    ||||||||||||||||||||||||||||| ||||||    
T  19241845 tctataatacccttaatcatttattatttcatttta 19241810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 315 - 452
Target Start/End: Original strand, 36881281 - 36881416
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtt 414  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  36881281 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaata--tgtgtgtt 36881378  T
Q  415 ttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  36881379 ttctataatacccttaattatttattatttcattttat 36881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 29375138 - 29375266
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29375138 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttcttatttttgatgaaaatatgtgtgtgttt 29375237  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||||||||||||||| ||||||||||||    
T  29375238 tctataatacccttaaccatttattattt 29375266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 43750137 - 43750265
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| | ||||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  43750137 tactcccttcgtttcaaaatacatgtccattttggagaaattggagtaaccaagaaaccaaataaattttgttatttttgatgaaattatatgtgtgttt 43750236  T
Q  416 tctataatacccttaatcatttattattt 444  Q
    |||||||||| ||||| ||||||||||||    
T  43750237 tctataatacacttaaccatttattattt 43750265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 323 - 420
Target Start/End: Complemental strand, 32835226 - 32835129
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctat 420  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaacaaataaattttgttatttttgatgaaattatgtgtgtgttttctat 32835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 316 - 437
Target Start/End: Original strand, 13702769 - 13702890
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||| ||| |||||||||| | |||||| |||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||| ||| |||||    
T  13702769 tactccatccattttaaaatacatgcctattttggagaaattgcagtaaccaagaaaccaaataaattttgatatttttgatgaaattatatgtttgttt 13702868  T
Q  416 tctataatacccttaatcattt 437  Q
    ||||||||||| |||| |||||    
T  13702869 tctataatacctttaaccattt 13702890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 27707441 - 27707363
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttattttt 394  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 27707363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 46435877 - 46435776
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| || |||||||  ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||    
T  46435877 tactccctccgtcccaatatgtaaaccccctttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 46435778  T
Q  317 ac 318  Q
    ||    
T  46435777 ac 46435776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 14646006 - 14645935
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  14646006 tttgcttttttcacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 14645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 20945448 - 20945346
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||| |||| ||||||||||  | || ||| | |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20945448 atactcccaccgtccctatatgtaaacaccttttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatat 20945349  T
Q  316 tac 318  Q
    |||    
T  20945348 tac 20945346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 401
Target Start/End: Original strand, 37293437 - 37293522
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    |||||| ||||||||| ||||| ||||||||||||||||||| |||  |||||| |||||||||||| |||| |||||||||||||    
T  37293437 tactccctccgtttcacaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaa 37293522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 51263046 - 51263143
Alignment:
Q  223 ccctccgttcctatatgtac-cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||||||||  ||||||| | |||||||||||| |||| |||| ||||||||||| ||||||||||| |||||| ||||| |||||||    
T  51263046 ccctccgttcctatatgtaaacccctttacatttttcacatttcttaaaaaaaattgttagtgtaattaatgtgtctgttttatgtgttagtattact 51263143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 19897152 - 19897076
Alignment:
Q  368 agaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||||||| |||||| | | ||||| |||||||||||||||||| || ||||||||||    
T  19897152 agaaatcaaataaattttgttattttttatgaaattctttgtgttttttctataatacccttactcttttattattt 19897076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 11388110 - 11388181
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||   ||||||||||||    
T  11388110 tttgcttttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattttgcgtgttaatattac 11388181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 44338040 - 44338141
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||||| || ||||||||||  |||| |||| | ||||||||||| ||||||||||||||||||||||||||| |||||| ||| | |||||||||    
T  44338040 atactccctctgtccctatatgtaaaccccttttgttattttcacattttttaagaaaagttgttagtgtagttaat-tgtctaatttttgtgttaatat 44338138  T
Q  316 tac 318  Q
    |||    
T  44338139 tac 44338141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 52325621 - 52325550
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||| |||||||||||| |||||||||  |||||||||| |||||||||||||||||| |||||||||||    
T  52325621 ctttgcatttttcacatttcttaagaaaaaatgttagtgtaattaatgtgtctattttatgtgttaatatta 52325550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 26517335 - 26517261
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  26517335 ccctttgcatttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattac 26517261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 29645352 - 29645418
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||| |||||| ||||||||||||    
T  29645352 ttttttcacatttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattac 29645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 31531565 - 31531472
Alignment:
Q  226 tccgttcctatatgtacccccttt--gcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| |||||||||| |||||||  ||||||||||||||| |||||||||||||| |||||| ||||||||||| |||| | |||| ||||||    
T  31531565 tccgtccctatatgtaacccctttttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatatta 31531472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 444
Target Start/End: Original strand, 37780988 - 37781065
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||| ||||||||||| ||||||||||||||| | ||||||| |||||||||||||  |||| ||||||||||||    
T  37780988 aagaaattaaataaattttattatttttgatgaaattctgtgtgttttttctataatactattaaccatttattattt 37781065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 41825247 - 41825183
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| || |||||||||||||| |||||| |||||||||||||||||| ||||||||||||    
T  41825247 ttttcacacttcttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattac 41825183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 11344547 - 11344618
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| |||||||||||| || ||||| |||||||||||||||| | |||||| |||||    
T  11344547 tttgcttttttcacatttcttaagaaaagttattggtgtaattaatgtgtctattttgtgtgttaacattac 11344618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 29676887 - 29676785
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| |||  |||||  | ||| |||| ||||||| |||| ||||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  29676887 atactccctccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatat 29676788  T
Q  316 tac 318  Q
    |||    
T  29676787 tac 29676785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 11393916 - 11393978
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||| | ||||||||    
T  11393916 ttttttcacattttttaaaaaaagttgttagtgtaattaatgtgtctattttgtgtgttaata 11393978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 25750513 - 25750587
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||| |||||| |||||||| ||||||| |||| ||||| |||||||||| | ||||||||||||    
T  25750513 ccctttgctttttttacatttcttaagaaaggttgttaatgtaattaatttgtctattttgtgtgttaatattac 25750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 30476031 - 30476101
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  30476031 ttgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 30476101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 31650785 - 31650711
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| ||||||||||||||||| |||| |||||| || | |||||||||||||||||| || |||||||||    
T  31650785 ccctttgcatttttcacatttattaaaaaaaattgttaatgcaattaatgtgtctattttatgtggtaatattac 31650711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 42010857 - 42010927
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| ||||||||||||| ||||||||| |||||| |||| |||||||||||||||| | |||||||||||    
T  42010857 tttgtttttttcacatttcttaagaaaatttgttaatgtaattaatgtgtctattttgtgtgttaatatta 42010927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 444
Target Start/End: Complemental strand, 1455374 - 1455297
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||| | ||||||||| | ||| | ||||||||||||    
T  1455374 aagaaatcaaataaattttgttatttttgataaaattatttgtgtttcttctataattctcttcaccatttattattt 1455297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 12094582 - 12094635
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  12094582 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 12094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 436
Target Start/End: Original strand, 54086577 - 54086674
Alignment:
Q  339 tgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatt 436  Q
    ||||||||||||||||||| |||   ||||| |||||||||||| |||| ||| ||||||||| | | ||| | |||||||||||||||||| |||||    
T  54086577 tgtccattttgaagaaattacacatgccaaggaatcaaataaatgttgtcattattgatgaaattctttgtattttttctataatacccttactcatt 54086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 27638188 - 27638124
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||||||||||| |||||||| ||||||| |||||||| | |||||||||||    
T  27638188 tttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaatatta 27638124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 37729176 - 37729076
Alignment:
Q  218 atactccctccgttcctatatgtaccccctttgc-ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||||| |||||| || | |||||   ||||||||||||| ||||||||| |||||| | || |||||||||||||||| | ||||||||||    
T  37729176 atactccctccgtttctatatataactcctttttgttttttcacatttcttaagaaaaattgttaatataattaatgtgtctattttgtgtgttaatatt 37729077  T
Q  317 a 317  Q
    |    
T  37729076 a 37729076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 41740121 - 41740019
Alignment:
Q  219 tactccctccgttcctatatgtaccccc---tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    |||||||||||||||||||| || ||||   ||| |||||||||||||| ||||||||| || ||| |  | |||||||||||||||| | |||||||||    
T  41740121 tactccctccgttcctatatataaccccctttttacttttttcacattttttaagaaaaattattaatacaattaatgtgtctattttgtgtgttaatat 41740022  T
Q  316 tac 318  Q
    |||    
T  41740021 tac 41740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 46048515 - 46048582
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||| |||| | | ||||||||||    
T  46048515 cttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatattac 46048582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 12077859 - 12077789
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||||||| |||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  12077859 ttgcatttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaatattac 12077789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 444
Target Start/End: Complemental strand, 18356134 - 18356016
Alignment:
Q  326 gtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatac 425  Q
    |||||| ||||||| ||||||||||| ||||| |||   ||||| ||| ||||| || |||| | ||||| ||||| | | ||||| |||||||||||||    
T  18356134 gtttcacaatacatatccattttgaaaaaattacacatgccaaggaattaaatacatgttgtcagttttggtgaaattctttgtgttttttctataatac 18356035  T
Q  426 ccttaatcatttattattt 444  Q
    ||||| |||||||| ||||    
T  18356034 ccttactcatttatcattt 18356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 369
Target Start/End: Original strand, 19911508 - 19911562
Alignment:
Q  315 ttactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  19911508 ttactccctccgtttcaaaatacatgttcattttggagaaattgcagtaaccaag 19911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 33287859 - 33287925
Alignment:
Q  251 cttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||| ||||||||||||  ||||||| ||||| |||||||||| | |||||||||||    
T  33287859 cttttttcacatttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatatta 33287925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 41727354 - 41727284
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||| ||||||||| |||||| ||||||||||| |||| | ||||||||||||    
T  41727354 ttgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 41727284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 31819401 - 31819466
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||| |||||| ||||||||||||    
T  31819401 tttttcacatttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatattac 31819466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 42891414 - 42891479
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||||||| || ||||| ||||| |||| | ||||||||||||    
T  42891414 tttttcacatttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattac 42891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 44277508 - 44277455
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  44277508 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 44277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 27047288 - 27047224
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||  |||||||||| |||||||| | |||||||||||||||| | ||||||||||||    
T  27047288 ttttcacattccttaagaaaagctgttagtgcaattaatgtgtctattttgtgtgttaatattac 27047224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 39617352 - 39617296
Alignment:
Q  262 tttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| ||||||||||| |||||| ||||||||||| |||| ||||||||||||||    
T  39617352 tttatttagaaaagttgtcagtgtaattaatgtgtctgttttgtatgttaatattac 39617296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 445
Target Start/End: Original strand, 44522491 - 44522568
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttt 445  Q
    |||||||||||||||||||| |||||||| ||||||  |  ||||| |||||||||||||  |||| |||||||||||||    
T  44522491 caagaaatcaaataaattttattattttttatgaaatca--tgtgttttttctataatacttttaaccatttattatttt 44522568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 50363015 - 50363087
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||||||||||||| ||||||||| |||| |||||| ||||| ||||| |||||| | ||||||||||    
T  50363015 ctttgtttttttcacattttttaagaaaaattgtcagtgtaattaatatgtctgttttatgtattaatattac 50363087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 29611830 - 29611893
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| || ||||| ||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  29611830 ttttctcacttattgagaaatgttgttagtgtaattaatgtgtctattttgtgtgttaatatta 29611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 48901625 - 48901562
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||| | ||||||| | ||||| |||||||||| | |||||||||||||    
T  48901625 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattact 48901562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 48903191 - 48903128
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||| | ||||||| | ||||| |||||||||| | |||||||||||||    
T  48903191 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattact 48903128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 13084470 - 13084404
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||| |||||||||||||| ||| || ||||||||||| |||| | ||||||||||||    
T  13084470 ttttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattac 13084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 22659574 - 22659640
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||| |||||| |||||||||||||||||| || ||||||| | |||||| | ||||||||||||    
T  22659574 tttttttacatttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattac 22659640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 23157078 - 23157140
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||||| ||| ||||||||| ||||||||| |||| |||||| ||||||||||| ||||    
T  23157078 accccctttgttttgttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgtttt 23157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Original strand, 24064278 - 24064356
Alignment:
Q  370 aaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    |||| |||||||||||||||| ||| || ||| |   ||||| ||||||||||||||||||  ||||||||||||||||    
T  24064278 aaattaaataaattttgttatattttataaaattcactgtgttttttctataatacccttacccatttattattttatt 24064356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 26121321 - 26121391
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| ||||| |||||| |||||||||||||| |||||| ||||||||| | |||| | |||||||||||    
T  26121321 tttgcattttttacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatatta 26121391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 40645664 - 40645734
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||| |||||  ||||| ||||||||||| |||| | ||||||||||||    
T  40645664 ttgcctttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattac 40645734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 48309443 - 48309504
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||| ||||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  48309443 ttcacgtttcttaagaaaagttgttagtgcaatta-tgtgtctattttgtatgttaatattac 48309504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 48963156 - 48963223
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaatttt 385  Q
    |||||| ||||||||||||||||| || |||||| ||||||||  |||||||| ||||||||||| ||||    
T  48963156 tactccctccgtttcaaaatacatatctattttggagaaattg--ctaaccaataaatcaaataattttt 48963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 52805249 - 52805171
Alignment:
Q  370 aaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    |||| ||||||||||||| ||||||||||||| | | ||  | ||||||||||||| ||||  ||||||||||||||||    
T  52805249 aaataaaataaattttgtcatttttgatgaaattgtttgcattttttctataatactcttacacatttattattttatt 52805171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 401
Target Start/End: Complemental strand, 53559880 - 53559802
Alignment:
Q  323 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    ||||||||| ||||| |||   ||||||||||||| |||  | ||||||| ||||||||| ||||||||||||||||||    
T  53559880 tccgtttcacaatacttgttgcttttgaagaaattacacatatcaagaaaacaaataaatgttgttatttttgatgaaa 53559802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 26998890 - 26998955
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||| | | || ||||||| |||||||| | ||||||||||||    
T  26998890 tttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatattac 26998955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 28477334 - 28477394
Alignment:
Q  217 aatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaag 275  Q
    |||||| ||||||| ||||||||||  |||||||| |||||||||||||| ||||||||||    
T  28477334 aatacttcctccgtccctatatgtaagcccccttttcttttttcacatttcttaagaaaag 28477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 38805245 - 38805298
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||| ||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaaccaag 38805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 41308887 - 41308822
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||| ||| ||||| |||||| ||||||||||| |||| | ||||||||||||    
T  41308887 tttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 41308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 41543719 - 41543654
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| |||| |||||||||  ||||| |||||||||||||||| | || ||||||||    
T  41543719 ttttttcacatttcttaaaaaaagttgtctgtgtatttaatgtgtctattttgtgtgataatatta 41543654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 54556035 - 54555970
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| |||| ||| | |||||||||| ||||| |||||||||||||||||||| ||||    
T  54556035 tttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttac 54555970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 33412071 - 33412019
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||| ||||||||| | |||||||||||||||| | ||||||||||||    
T  33412071 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattac 33412019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 48581309 - 48581377
Alignment:
Q  249 tgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||||||| |||| ||||||| ||  |||||||||||||| |||||| | | |||||||||    
T  48581309 tgcttttttcacatttcttaaaaaaagttattgatgtagttaatgtgtttattttgtgtattaatatta 48581377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 48820512 - 48820444
Alignment:
Q  333 aatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    |||||||||  |||||| ||||||| |  || |||| ||| ||||||||||||||||||||||||||||    
T  48820512 aatacatgtttattttggagaaattacggtatccaataaaccaaataaattttgttatttttgatgaaa 48820444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Original strand, 30171790 - 30171825
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaa 401  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30171790 caagaaatcaaataaattttgttgtttttgatgaaa 30171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 44083620 - 44083687
Alignment:
Q  252 ttttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| || ||||||| |||||| |||| ||||||| |||||||| | ||||||||||||    
T  44083620 ttttttcacatttttttaagaaaaattgttattgtaattaatgtatctattttgtgtgttaatattac 44083687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 444
Target Start/End: Original strand, 17755221 - 17755283
Alignment:
Q  382 ttttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||| |||||||| |||||  ||| ||||| |||||||||||| | |||||||||||||||||    
T  17755221 tttttttattttttatgaatttatttgtgttttttctataatatctttaatcatttattattt 17755283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 444
Target Start/End: Original strand, 19056541 - 19056603
Alignment:
Q  382 ttttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||| |||||||| |||||  ||| ||||| |||||||||||| | |||||||||||||||||    
T  19056541 tttttttattttttatgaatttatttgtgttttttctataatatctttaatcatttattattt 19056603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 44276770 - 44276816
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    ||||||||||  ||||||||||||||||||||||||||  |||||||    
T  44276770 aatattactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 49000447 - 49000497
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||||||||| |||||||||||||||  || | ||||||||||||||||    
T  49000447 tttttcacattttttaagaaaagttgttgatgcaattaatgtgtctatttt 49000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 19823895 - 19823928
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtcca 344  Q
    ||||||||||| ||||||||||||||||||||||    
T  19823895 aatattactccctccgtttcaaaatacatgtcca 19823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 19912215 - 19912174
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 28228137 - 28228217
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    |||||| |||||| ||||||| ||  || ||||||||||||| | |||| |||| |||||||||||||| | |||||||||    
T  28228137 atactctctccgtccctatatataagcctcctttgcttttttgatatttcttaaaaaaagttgttagtgcaattaatgtgt 28228217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 35145235 - 35145280
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    |||||||||||| |||||||||||||| |||||| |||| ||||||    
T  35145235 tttttcacatttcttaagaaaagttgtgagtgtaattaacgtgtct 35145280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 35765795 - 35765692
Alignment:
Q  219 tactccctccgttcctatatgtac--cccctttgctttttt--cacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||  |||||||||   |||||||| ||||||  ||||||| |||||||||||| | |||||| ||||| ||||| |||| | | ||||||    
T  35765795 tactccctccgtcactatatgtaattcccctttgttttttttccacatttcttaagaaaagttatcagtgtaattaatatgtctgttttgtgtattaata 35765696  T
Q  315 ttac 318  Q
    ||||    
T  35765695 ttac 35765692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 38806382 - 38806341
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 49891946 - 49891991
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtcta 299  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||||||    
T  49891946 ttttcacatatattaagaaaagttgatagtgtgattaatgtgtcta 49891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 4235760 - 4235803
Alignment:
Q  325 cgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||    
T  4235760 cgtttcaaaatacatgtcg-ttttggagaaattgcactaaccaag 4235803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 444
Target Start/End: Complemental strand, 27707177 - 27707137
Alignment:
Q  404 atgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||| |||||||||||||||| |||||| ||||||||||||    
T  27707177 atgtatgtgttttctataatatccttaaccatttattattt 27707137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 44698606 - 44698553
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattt 302  Q
    |||| |||||||||||||||||| ||||||  |||||||| |||| ||||||||||    
T  44698606 tttgtttttttcacatttattaaaaaaagt--ttagtgtaattaacgtgtctattt 44698553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 3518908 - 3519044
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3518908 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 3519007  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  3519008 tctataatacccttaataatttattatttcattttat 3519044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 39938170 - 39938306
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 39938269  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39938270 tctataatacccttaatcatttattatttcattttat 39938306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 317 - 452
Target Start/End: Original strand, 23366790 - 23366925
Alignment:
Q  317 actccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgtttt 416  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  23366790 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgtttt 23366889  T
Q  417 ctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||| |||||||    
T  23366890 ctataatacccttaatcatttattatttcattttat 23366925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 316 - 443
Target Start/End: Complemental strand, 37674014 - 37673887
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 37673915  T
Q  416 tctataatacccttaatcatttattatt 443  Q
    ||||||||||||||||||||||||||||    
T  37673914 tctataatacccttaatcatttattatt 37673887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 316 - 452
Target Start/End: Original strand, 1102503 - 1102639
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 1102602  T
Q  416 tctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||| |||||||||||| |||||||    
T  1102603 tctataatacccttaaccatttattatttcattttat 1102639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 316 - 448
Target Start/End: Complemental strand, 12970016 - 12969884
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||    
T  12970016 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtatattt 12969917  T
Q  416 tctataatacccttaatcatttattattttatt 448  Q
    |||||||||||||||| ||||||||||||||||    
T  12969916 tctataatacccttaaccatttattattttatt 12969884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 344 - 452
Target Start/End: Original strand, 1646317 - 1646423
Alignment:
Q  344 attttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatt 443  Q
    |||||| ||||||||||  ||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  1646317 attttggagaaattgcagcaaccaagaaactaaataaattttgttatttttgatgaaaata--tgtgtgttttctataatacccttaatcatttattatt 1646414  T
Q  444 ttattttat 452  Q
    | |||||||    
T  1646415 tcattttat 1646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 17663584 - 17663686
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  17663584 tactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatatt 17663683  T
Q  317 act 319  Q
    |||    
T  17663684 act 17663686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 20361946 - 20362045
Alignment:
Q  219 tactccctccgttcctatatgtaccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||| || ||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  20361946 tactccctccgtccctatatataaccc-tctgcttttttcacatttcttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattac 20362044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 22388335 - 22388276
Alignment:
Q  393 ttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22388335 ttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcattttat 22388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 45214685 - 45214784
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| || |||||||  |||||||||| |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | ||||||||||    
T  45214685 tactccctccgtcccgatatgtaagccccctttgcatttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 45214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 44424586 - 44424656
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  44424586 ttgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatattac 44424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 3645312 - 3645385
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||||||||||| | | |||||||||||    
T  3645312 ctttgcttttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatattact 3645385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 27297561 - 27297638
Alignment:
Q  241 accccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| | ||||||||||||    
T  27297561 accccctttgcttttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctgttttgtgtgttaatattac 27297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 431
Target Start/End: Complemental strand, 35179164 - 35179097
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaa 431  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||    
T  35179164 accaagaaatgaaataaattttgttatttttgatgaaattttgtgtgttttttctataataaccttaa 35179097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 247619 - 247720
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| ||||||| ||  | || || | ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| | |||||||||    
T  247619 atactccctccgtccctatatttaagctccattgggttttttcacattttttaaggaaagttgttagtgtaattaatgtgtctattttgtgtgttaatat 247718  T
Q  316 ta 317  Q
    ||    
T  247719 ta 247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 4398633 - 4398568
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  4398633 ttttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 4398568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 21012811 - 21012913
Alignment:
Q  211 aaaaataatactccctccgttcctatatgtaccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgtt 310  Q
    ||||||| ||||||||||||||||||||     || ||||| ||||||| |||| ||||||||||||||||||| | ||||||||| |||||| | ||||    
T  21012811 aaaaatagtactccctccgttcctatata----ccttttgcatttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgtt 21012906  T
Q  311 aatatta 317  Q
    |||||||    
T  21012907 aatatta 21012913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 42250996 - 42250935
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  42250996 ccccctttgcttttttcacatttcttatgaaaagttggtagtgtaattaatgtgtctatttt 42250935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 448
Target Start/End: Original strand, 19976380 - 19976463
Alignment:
Q  364 accaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattttatt 448  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||| | ||||||||||||||||||   |||||||||||||||    
T  19976380 accaagaaatcaaataaattttggtacttttgataaaattatgtgt-ttttttctataatacccttacctatttattattttatt 19976463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 26512061 - 26512133
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||||||| |||| |||| |||||||| || ||||||||| |||||||| |||||||||||||    
T  26512061 tttgcttttttcacatttcttaaaaaaaattgttagtataattaatgtgtttattttatgtgttaatattact 26512133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 41865701 - 41865777
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||||||||| ||||||||||||||| || || |||||||||||||||| | |||||| |||||    
T  41865701 ccccttttgcttttttcacatttcttaagaaaagttgttggtctaattaatgtgtctattttgtgtgttaacattac 41865777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 14420637 - 14420738
Alignment:
Q  219 tactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||| |||||| ||||||||||  |||||||| ||||||| |  ||| | ||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  14420637 tactctctccgtccctatatgtaagccccctttactttttttatttttctaaagaaaagttgttagtgtaattaatgtgtctgttttgtgtgttaatatt 14420736  T
Q  317 ac 318  Q
    ||    
T  14420737 ac 14420738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 40346229 - 40346124
Alignment:
Q  216 taatactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaat 313  Q
    ||||||||| | ||| ||||||||||  ||| ||||| ||||||||||||| ||||||||||||||| ||| | |||||||||  ||||| | |||||||    
T  40346229 taatactccattcgtccctatatgtaaaccctctttgtttttttcacattttttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaat 40346130  T
Q  314 attact 319  Q
    ||||||    
T  40346129 attact 40346124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 17251070 - 17251005
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||||||||||| || ||||||||||| |||| | ||||||||||||    
T  17251070 tttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatattac 17251005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 34224431 - 34224378
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 34224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 37355032 - 37355097
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||    
T  37355032 tttttcacatttcttaagaaaagttgtttgtgtaattaatgtgtctcttttgtgtgttaatattac 37355097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 448
Target Start/End: Complemental strand, 39562162 - 39562032
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| |||||||||  |||| ||||  |||| | |||||| |||  | ||| ||||||||||||||||||||||||||| |||| ||| | ||| |||    
T  39562162 tactccctccgtttcatgatacttgtcgcttttaaggaaattacacatatcaaaaaatcaaataaattttgttatttttgaagaaattatttttgttttt 39562063  T
Q  416 tctataatacccttaatcatttattattttatt 448  Q
    ||  |||||||||||| ||||||||||| ||||    
T  39562062 tc--taatacccttaaccatttattattgtatt 39562032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 13477148 - 13477076
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||| |||||||||||| ||||||||| ||||||||| | ||||| ||| |||||||| |||||||||||||    
T  13477148 tttgcatttttcacattttttaagaaaaattgttagtgcaattaatatgtttattttatgtgttaatattact 13477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 14779832 - 14779905
Alignment:
Q  369 gaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    ||||| ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||  |||| |||||||||||||    
T  14779832 gaaattaaataaatttttttatttttgatgaaattatttgtgttttttctataata--cttactcatttattattt 14779905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 15851527 - 15851591
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| |||| | |||||||||||    
T  15851527 tttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatatta 15851591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 441
Target Start/End: Original strand, 18078049 - 18078181
Alignment:
Q  309 ttaatattactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtg 408  Q
    |||| |||||||| ||||||||| ||||  ||||  |||| ||||| || ||   ||||| |||||||||||||||||||||||||||||||  | | ||    
T  18078049 ttaaaattactccatccgtttcacaatatttgtcgcttttaaagaatttacaaataccaaaaaatcaaataaattttgttatttttgatgaatttttttg 18078148  T
Q  409 tgtgttttctataatacccttaatcatttatta 441  Q
    ||  ||||||||||||| ||| | |||||||||    
T  18078149 tggattttctataatactcttgaccatttatta 18078181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 43650024 - 43650096
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||| |||||| || |||||| |||| |||||| ||||||||||| |||| |||||||||||||||    
T  43650024 tttgctttttttacatttctttagaaaaattgtcagtgtaattaatgtgtctgttttgtatgttaatattact 43650096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 44421408 - 44421511
Alignment:
Q  218 atactccctccgttcctatatgta--ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatat 315  Q
    ||||||||||||| |||  |||||  | |||||| |||||||||||||| ||||||||| |||| |||||| ||||||| ||| |||| | |||||||||    
T  44421408 atactccctccgtcccttaatgtaaactccctttacttttttcacatttcttaagaaaaattgtcagtgtaattaatgtatctgttttgtttgttaatat 44421507  T
Q  316 tact 319  Q
    ||||    
T  44421508 tact 44421511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 1002997 - 1002922
Alignment:
Q  326 gtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaa 401  Q
    |||||||||||||||||  |||||| || ||| |||  || ||||||||||||||||||| |||||||||||||||    
T  1002997 gtttcaaaatacatgtcgcttttgaggatattacacatactaagaaatcaaataaattttattatttttgatgaaa 1002922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 2395797 - 2395848
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctatttt 303  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  2395797 tttttttacatttcttaagaaaagttgttagtgtaattaatgtgtctatttt 2395848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 4033568 - 4033643
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||| | |||| |||||||||||| |||||||| ||||||| ||| |||| | |||||||||||||    
T  4033568 ccctttgctttttttatatttcttaagaaaagttattagtgtaattaatgtttctgttttctgtgttaatattact 4033643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 27749499 - 27749574
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||| |||||||||||||| |||||||||||||| |||||| ||||| ||||| |||| | | |||||||||||    
T  27749499 ccctttacttttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatattact 27749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 28265066 - 28264995
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||| | |||| |  |||||||||||    
T  28265066 tttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattac 28264995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 44274776 - 44274713
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| |||||||||||||| | |||| ||||||||||| |||||| ||||||||||    
T  44274776 tttttcacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttatgtgttaatatt 44274713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 9718286 - 9718216
Alignment:
Q  248 ttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| |||||||||||| |||||||| ||||| |||||| ||||||||||| |||| | ||||||||||||    
T  9718286 ttgcatttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 9718216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 24774860 - 24774926
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| ||||||||| || |||||||| ||||||| |||||||| | ||||||||||||    
T  24774860 ttttttcacattttttaagaaaatttattagtgtaattaatgtatctattttgtgtgttaatattac 24774926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 35178903 - 35178837
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| | |||| | || |||||||||    
T  35178903 ttttttcacatttcttaagaaaagttgtcagtgtagttaatgtgtatgttttgtgtgataatattac 35178837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 2917207 - 2917150
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgt 309  Q
    ||||| ||||||| |||||||||||||||||| || |||||||||||||||| |||||    
T  2917207 tttttccacatttcttaagaaaagttgttagtataattaatgtgtctattttgtatgt 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 11071677 - 11071730
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    ||||||||||||||||||| | |||||||||||| ||||| |||||||||||||    
T  11071677 ttaagaaaagttgttagtgcaattaatgtgtctaatttatgtgttaatattact 11071730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 38449859 - 38449759
Alignment:
Q  219 tactccctccgttcctatatgtacccc--ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    |||||||||||| |||||||||| |||  |||| |||||||||||||| |||| ||||||| ||  |||| ||||||||||| |||| | | ||||||||    
T  38449859 tactccctccgtccctatatgtaaccctccttttcttttttcacatttcttaataaaagttatttttgtaattaatgtgtctgttttgtgtattaatatt 38449760  T
Q  317 a 317  Q
    |    
T  38449759 a 38449759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 11459143 - 11459215
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||||||||||||| ||| ||||||||||  |||||  |||||||||| |||| | |||||||||||||    
T  11459143 tttgcttttttcacatttcttatgaaaagttgtcggtgtaaataatgtgtctgttttgtgtgttaatattact 11459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 35453816 - 35453776
Alignment:
Q  279 ttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  35453816 ttagtgtaattaatgtgtctattttatatgttaatattact 35453776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 43709905 - 43709981
Alignment:
Q  244 ccctttgcttttttcacatttattaag-aaaagttgttagtgtagttaatgtgtctattttatatgttaatattact 319  Q
    |||||||| |||||||||||| ||||| |||| ||||||||| | |||||| ||||||||| | |||||||||||||    
T  43709905 ccctttgcatttttcacatttcttaagcaaaaattgttagtgcaattaatgcgtctattttgtgtgttaatattact 43709981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 12121891 - 12121942
Alignment:
Q  266 ttaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| |||||||||||||||| ||||| |||||||||||||||| |||||||    
T  12121891 ttaaaaaaagttgttagtgtaattaatatgtctattttatatgtgaatatta 12121942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 34042175 - 34042100
Alignment:
Q  243 cccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||  ||||||||||| || | |||| ||||||||  | |||||||||||||||| ||||||||||||||    
T  34042175 cccctttgcaattttcacatttttttaaaaaaattgttagttcaattaatgtgtctattttgtatgttaatattac 34042100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 2048936 - 2048878
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaa 312  Q
    ||||||||||| ||||||||||||||| |||||  |||||| |||||||||| ||||||    
T  2048936 ttttcacatttcttaagaaaagttgttggtgtaaataatgtctctattttatgtgttaa 2048878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 20426928 - 20427010
Alignment:
Q  245 cctttgcttttttcacatttatt-aagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattactccttccg 326  Q
    ||||||| ||||| |||||| || ||||||| ||||||||| | |||||||||||||||| | ||||| ||||||||| ||||    
T  20426928 cctttgcatttttgacatttttttaagaaaaattgttagtgaaattaatgtgtctattttgtgtgttattattactccctccg 20427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 401
Target Start/End: Complemental strand, 32840401 - 32840367
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaa 401  Q
    |||||||||||||||||||||||||||||||||||    
T  32840401 aagaaatcaaataaattttgttatttttgatgaaa 32840367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 41665705 - 41665767
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||||| |||||||| ||||| |||||| ||||||||||| |||| | ||||||||    
T  41665705 ttttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaata 41665767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 920766 - 920701
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||| ||||  || || ||||||||||||||| ||| |||||| |||||||||||||    
T  920766 ttttttcacatttcttaaataatgtagttagtgtagttaatatgtttattttgtatgttaatatta 920701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 2131753 - 2131818
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| |||||| ||||||||||||||||||| | ||||  |||||||||| | ||||||||||||    
T  2131753 ttttttacatttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattac 2131818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 8065180 - 8065116
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||  ||||||| ||||| |||||| ||||||||||| |||| | ||||||||||||    
T  8065180 ttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 8065116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 32860505 - 32860453
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttat 305  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||| ||||||||    
T  32860505 tttttcactcttattaagaaaagttggtagtgtagttagtgtgtttattttat 32860453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 45150842 - 45150778
Alignment:
Q  256 ttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattactc 320  Q
    ||||||||| ||||||||||||||| ||| | |||||||||  ||||| | ||||||||||||||    
T  45150842 ttcacatttcttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactc 45150778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 11168666 - 11168729
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    |||| ||||||||||||||||||||||| |||| ||  | ||| |||||||| |||||||||||    
T  11168666 tttttacatttattaagaaaagttgttaatgtaatttttatgtttattttatgtgttaatatta 11168729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 14527619 - 14527684
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||  |||| |||| ||||||| ||| |||||||||||||||| | ||||||||||||    
T  14527619 ttttttcacattatttaaaaaaa-ttgttagggtaattaatgtgtctattttgtgtgttaatattac 14527684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 28733821 - 28733884
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| ||||||||| ||||  ||||| ||||||||||| |||  ||||||||||||||    
T  28733821 tttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgttt--tatgttaatattac 28733884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 34222053 - 34222099
Alignment:
Q  311 aatattactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    |||| |||||||||||||| ||||||||||||||||||  |||||||    
T  34222053 aatagtactccttccgttttaaaatacatgtccattttatagaaatt 34222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 8384081 - 8384016
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||| |||| ||||||||| | ||||||| | ||||||||| |||||| | ||||||||||||    
T  8384081 tttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatattac 8384016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 31644551 - 31644486
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||  ||||||||||| | ||| || ||||||||||| |||| | ||||||||||||    
T  31644551 tttttcacattttataagaaaagttatcagtttaattaatgtgtctgttttttgtgttaatattac 31644486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 34329998 - 34330063
Alignment:
Q  253 tttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||| ||||||||||||| || |||||||  || |||| | ||||||||||||    
T  34329998 tttttcacatttcttaaaaaaagttgttagtataattaatgtacctgttttgtgtgttaatattac 34330063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 1829729 - 1829773
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgt 296  Q
    ||||||||||| ||||||||||||| ||||||| | |||||||||    
T  1829729 ttttttcacatatattaagaaaagtggttagtgaatttaatgtgt 1829773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 2521381 - 2521345
Alignment:
Q  281 agtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||||||||||||||||||||||| || ||||||||    
T  2521381 agtgtagttaatgtgtctattttatgtggtaatatta 2521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 3237717 - 3237784
Alignment:
Q  253 tttttcacatttattaagaaaa--gttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||||||| |||||||||  ||| ||| |||| ||||||||||| |||| | ||||||||||||    
T  3237717 tttttcacattttttaagaaaagtgttattaatgtaattaatgtgtctgttttgtgtgttaatattac 3237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 13125141 - 13125173
Alignment:
Q  312 atattactccttccgtttcaaaatacatgtcca 344  Q
    |||||||||| ||||||||||||||||||||||    
T  13125141 atattactccatccgtttcaaaatacatgtcca 13125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 13534411 - 13534471
Alignment:
Q  254 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaata 314  Q
    ||||||||||| |||||||| ||||| |||||| ||||||||| | |||| | ||||||||    
T  13534411 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtttgttttgtgtgttaata 13534471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 444
Target Start/End: Original strand, 24777680 - 24777795
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgt--tatttttgatgaaaatatgtgtgtgttttctataataccct 428  Q
    ||||||| |||| ||||| |||||||| |||  | |||| ||| |||||||| ||||  | ||||| |||||| | | ||||| |||| |||||||||||    
T  24777680 aaaatacttgtcaattttaaagaaattacacatatcaaggaattaaataaatgttgtctttttttttatgaaattctttgtgttttttttataataccct 24777779  T
Q  429 taatcatttattattt 444  Q
    || | |||||||||||    
T  24777780 tatttatttattattt 24777795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 32677470 - 32677534
Alignment:
Q  252 ttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatt 316  Q
    ||||| ||||||| ||||||||| |||||| |  | ||||||||||||||||||  |||||||||    
T  32677470 tttttccacatttcttaagaaaaattgttaatacaattaatgtgtctattttatgggttaatatt 32677534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 36117053 - 36117009
Alignment:
Q  263 ttattaagaaaagttgttagtgtagttaatgtgtctattttatat 307  Q
    |||||||| ||||||| ||||||||||||||| || |||||||||    
T  36117053 ttattaaggaaagttggtagtgtagttaatgtatccattttatat 36117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 316 - 448
Target Start/End: Original strand, 45454 - 45586
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 415  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  45454 tactccctccgtttcaaaatacatgttcattttggagaaattgcaccaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtattt 45553  T
Q  416 tctataatacccttaatcatttattattttatt 448  Q
    |||||||||||||||| ||||||||||||||||    
T  45554 tctataatacccttaaccatttattattttatt 45586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 168 - 298
Alignment:
Q  314 attactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgt 413  Q
    |||||||| ||||||||||||||||| |||| |||| |||||||||| |||||||        |||||||||||||||||| ||||||||||||||||||    
T  168 attactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgt 259  T
Q  414 tttctataatacccttaatcatttattattttattttat 452  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  260 tttctataatacccttaaccatttattatttcattttat 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 331 - 444
Target Start/End: Complemental strand, 525 - 414
Alignment:
Q  331 aaaatacatgtccattttgaagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataataccctta 430  Q
    ||||||||||| |||||||  ||||||||| ||| ||| |||||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||    
T  525 aaaatacatgttcattttggcgaaattgcagtaatcaaaaaatcaaataaattttgttatttttgataaaatta--tgtgtgttttttataataccctta 428  T
Q  431 atcatttattattt 444  Q
    ||||||||||||||    
T  427 atcatttattattt 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 2031 - 1957
Alignment:
Q  244 ccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| | ||||||||||||    
T  2031 ccctttgcttttttcacatttcttaagataagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 70874 - 70952
Alignment:
Q  366 caagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattattt 444  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| |||||| ||| |||||||| ||||||||||||    
T  70874 caagaaatcaaataaattttgttatttttgatgaaattctgtgtgttttttctgtaacacccttaaccatttattattt 70952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 214603 - 214679
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||    
T  214603 ccccttttacttttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattac 214679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 23467 - 23520
Alignment:
Q  316 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaag 369  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 23916 - 23872
Alignment:
Q  313 tattactccttccgtttcaaaatacatgtccattttgaagaaatt 357  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||    
T  23916 tattactccatccgtttcaaaatacatgtccattttagagaaatt 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 38593 - 38521
Alignment:
Q  246 ctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    |||||||| |||||||||| |||| |||| |||||||| || |||||||||||||||| | ||||||||||||    
T  38593 ctttgcttctttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattac 38521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5592 - 5536
Alignment:
Q  7 aagtaaggtatgaagtatatattaagtggtttctcttctccttcttccgtattcatc 63  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||| ||| ||||    
T  5592 aagtaaggtatgaagtagatagtaagtgctttctcttctccttcttccatatccatc 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 444
Target Start/End: Complemental strand, 65375 - 65312
Alignment:
Q  382 ttttgttatttttgatgaaaatatgtgtgtgtttt-ctataatacccttaatcatttattattt 444  Q
    |||| ||||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||    
T  65375 ttttattatttttgatgaaattatatgtgtttttttctataatacccttaaccatttattattt 65312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 99932 - 99861
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatattac 318  Q
    ||||| ||||||| |||| ||||||||||||||||||| |  | ||||||||||||| | ||||||||||||    
T  99932 tttgcatttttcatatttgttaagaaaagttgttagtgcaacttatgtgtctattttgtgtgttaatattac 99861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 49126 - 49196
Alignment:
Q  247 tttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatatgttaatatta 317  Q
    ||||| ||||| |||||| ||||||||| |||||| |||| ||||| |||||| ||| | |||||||||||    
T  49126 tttgcattttttacatttcttaagaaaaattgttaatgtaattaatatgtctactttgtgtgttaatatta 49196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Complemental strand, 15551 - 15516
Alignment:
Q  367 aagaaatcaaataaattttgttatttttgatgaaaat 403  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15551 aagaaatcaaataaattt-gttatttttgatgaaaat 15516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 45598 - 45542
Alignment:
Q  242 ccccctttgcttttttcacatttattaagaaaagttgttagtgtagttaatgtgtct 298  Q
    ||||| |||| ||||||||||||||||| ||| |||||  ||| |||||||||||||    
T  45598 cccccattgcatttttcacatttattaataaatgttgtctgtgcagttaatgtgtct 45542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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