View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4711_high_7 (Length: 259)

Name: NF4711_high_7
Description: NF4711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4711_high_7
NF4711_high_7
[»] chr6 (60 HSPs)
chr6 (15-259)||(28139425-28139669)
chr6 (26-259)||(26646374-26646607)
chr6 (26-259)||(26752342-26752575)
chr6 (41-259)||(28234474-28234692)
chr6 (38-259)||(31284195-31284416)
chr6 (23-259)||(28242696-28242932)
chr6 (32-259)||(27593079-27593306)
chr6 (32-259)||(27678847-27679074)
chr6 (49-259)||(28226868-28227078)
chr6 (62-259)||(26341993-26342190)
chr6 (38-259)||(26622883-26623104)
chr6 (38-259)||(26728861-26729082)
chr6 (38-259)||(27677673-27677894)
chr6 (71-255)||(27718442-27718626)
chr6 (35-259)||(28181018-28181242)
chr6 (35-259)||(28185270-28185494)
chr6 (44-255)||(27611065-27611276)
chr6 (44-255)||(27724908-27725119)
chr6 (44-255)||(26802355-26802566)
chr6 (44-255)||(27698557-27698768)
chr6 (32-259)||(27706461-27706688)
chr6 (32-255)||(26884064-26884287)
chr6 (41-255)||(28325391-28325605)
chr6 (116-259)||(28297772-28297915)
chr6 (116-259)||(28514158-28514301)
chr6 (170-259)||(26823879-26823968)
chr6 (32-256)||(26936995-26937219)
chr6 (44-255)||(28781052-28781263)
chr6 (15-259)||(26893530-26893774)
chr6 (32-259)||(26861517-26861744)
chr6 (44-255)||(28786191-28786402)
chr6 (44-255)||(28792312-28792523)
chr6 (117-259)||(25579705-25579847)
chr6 (105-255)||(28149912-28150061)
chr6 (110-259)||(26142844-26142993)
chr6 (170-259)||(27604764-27604853)
chr6 (167-259)||(2184324-2184416)
chr6 (99-259)||(2184866-2185026)
chr6 (153-259)||(26656011-26656117)
chr6 (153-259)||(26761982-26762088)
chr6 (110-259)||(25481721-25481870)
chr6 (153-259)||(27338124-27338230)
chr6 (153-259)||(27398864-27398970)
chr6 (170-259)||(26048884-26048973)
chr6 (170-259)||(26070053-26070142)
chr6 (62-259)||(28098428-28098625)
chr6 (61-257)||(27531258-27531454)
chr6 (212-259)||(26848741-26848788)
chr6 (44-246)||(27229145-27229347)
chr6 (170-259)||(26055965-26056054)
chr6 (170-259)||(26075935-26076024)
chr6 (215-259)||(26635774-26635818)
chr6 (215-259)||(26741740-26741784)
chr6 (170-225)||(25507002-25507057)
chr6 (153-259)||(25538562-25538668)
chr6 (213-259)||(26975134-26975180)
chr6 (50-163)||(26949580-26949693)
chr6 (61-150)||(27214347-27214436)
chr6 (61-150)||(27234792-27234881)
chr6 (50-150)||(25071578-25071678)
[»] chr4 (6 HSPs)
chr4 (32-259)||(18679613-18679840)
chr4 (32-258)||(18731551-18731777)
chr4 (32-258)||(18724132-18724358)
chr4 (32-259)||(18655523-18655750)
chr4 (32-259)||(18699446-18699673)
chr4 (20-252)||(5091020-5091252)
[»] scaffold0038 (4 HSPs)
scaffold0038 (41-259)||(34635-34853)
scaffold0038 (23-259)||(42858-43094)
scaffold0038 (49-259)||(27366-27576)
scaffold0038 (41-255)||(116706-116920)
[»] chr1 (3 HSPs)
chr1 (26-259)||(268403-268636)
chr1 (15-259)||(28127725-28127970)
chr1 (15-259)||(28164408-28164652)
[»] scaffold0019 (1 HSPs)
scaffold0019 (35-259)||(58341-58565)
[»] scaffold0349 (2 HSPs)
scaffold0349 (44-259)||(3480-3696)
scaffold0349 (44-255)||(14419-14629)
[»] chr8 (2 HSPs)
chr8 (26-259)||(29273829-29274062)
chr8 (15-120)||(31903735-31903840)
[»] chr2 (1 HSPs)
chr2 (44-259)||(3279601-3279816)
[»] scaffold0277 (2 HSPs)
scaffold0277 (44-255)||(4734-4945)
scaffold0277 (44-255)||(13695-13906)
[»] scaffold0419 (1 HSPs)
scaffold0419 (44-255)||(7438-7649)
[»] scaffold1254 (1 HSPs)
scaffold1254 (44-225)||(10-191)


Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 259
Target Start/End: Original strand, 28139425 - 28139669
Alignment:
Q  15 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28139425 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 28139524  T
Q  115 tattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28139525 tattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaac 28139624  T
Q  215 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  28139625 tatgcctcttcttcgttttgcttggacgaacttgtccacatcatt 28139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 26646374 - 26646607
Alignment:
Q  26 gtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgata 125  Q
    ||||| |||| |||||| |||||||||||||||  |||||| |||||| |||||||||| ||||||  ||||   ||||| ||||| || |||||||||     
T  26646374 gtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgatt 26646473  T
Q  126 gggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    | || ||| |  |||| || |||||  |||| |||||| | || ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  26646474 gtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 26646573  T
Q  226 tttgttttgcttggacgaacttgtccacatcatt 259  Q
    |   ||||| ||||||||||||||||||||||||    
T  26646574 taaattttgtttggacgaacttgtccacatcatt 26646607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 26752342 - 26752575
Alignment:
Q  26 gtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgata 125  Q
    ||||| |||| |||||| |||||||||||||||  |||||| |||||| |||||||||| ||||||  ||||   ||||| ||||| || |||||||||     
T  26752342 gtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgatt 26752441  T
Q  126 gggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    | || ||| |  |||| || |||||  |||| |||||| | || ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  26752442 gtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 26752541  T
Q  226 tttgttttgcttggacgaacttgtccacatcatt 259  Q
    |   ||||| ||||||||||||||||||||||||    
T  26752542 taaattttgtttggacgaacttgtccacatcatt 26752575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 259
Target Start/End: Original strand, 28234474 - 28234692
Alignment:
Q  41 agaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggag 140  Q
    ||||| ||||||||||| |  ||||| || | ||||||||| | ||||||| || ||   ||||||||||| || |||||||| ||||||||||||||||    
T  28234474 agaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggag 28234573  T
Q  141 gtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttgga 240  Q
    | || |||||| |||| |||||  | || ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||    
T  28234574 gagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttgga 28234673  T
Q  241 cgaacttgtccacatcatt 259  Q
    |||||||||||||||||||    
T  28234674 cgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 31284195 - 31284416
Alignment:
Q  38 ttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaag 137  Q
    ||||| || ||||||||||| |  |||||||| || ||||||||||| ||||||  ||||   ||||||||||| || ||||||||||| || ||||||     
T  31284195 ttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaa 31284294  T
Q  138 gaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgctt 237  Q
    |||| || |||||  |||| |||||||  || ||||||||||| ||||||||||| ||||| ||||||||   ||||||||||||||| | |||||| ||    
T  31284295 gaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgttt 31284394  T
Q  238 ggacgaacttgtccacatcatt 259  Q
    ||||||||||||||||||||||    
T  31284395 ggacgaacttgtccacatcatt 31284416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 259
Target Start/End: Original strand, 28242696 - 28242932
Alignment:
Q  23 gatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatg 122  Q
    |||||||| || || || ||||| |||||||||||||  ||||| ||||||||||||||||||| |||| || |    ||||| | ||| || |||||||    
T  28242696 gatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatg 28242795  T
Q  123 atagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctc 222  Q
    | || || |||| |||||||||| ||||| |||| |||||  | || ||||||||||| |||||||||||||| ||||| || || ||||| ||||| ||    
T  28242796 acagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttc 28242895  T
Q  223 ttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||||  ||||||||||||||||||||||||||||||    
T  28242896 ttcttcattttgcttggacgaacttgtccacatcatt 28242932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 27593306 - 27593079
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| |||||||| ||||||||||| | ||||||||| || ||||||||||| ||||||  ||||   |||||| |||| || |||||||| |  |  |    
T  27593306 ctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtc 27593207  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    ||||| ||||  | |||||  |||| |||||  | || ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| |||    
T  27593206 ttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgtt 27593107  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||| ||||||||||    
T  27593106 ttgtttggacgaacttgaccacatcatt 27593079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 259
Target Start/End: Original strand, 27678847 - 27679074
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| |||||||| ||||||||||| | ||||||||| || ||||||||||| ||||||  ||||   |||||| |||| || |||||| | |  |  |    
T  27678847 ctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtc 27678946  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    ||||| |||| || |||||  |||| |||||  | || ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||  ||    
T  27678947 ttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcatt 27679046  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||||||||||||||    
T  27679047 ttgtttggacgaacttgtccacatcatt 27679074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 259
Target Start/End: Original strand, 28226868 - 28227078
Alignment:
Q  49 tgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaa 148  Q
    |||||||||||  ||||| ||||||||||||||||  | |||| || |    ||||| ||||| ||  |||||||||| ||||||||||||||||| |||    
T  28226868 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 28226967  T
Q  149 atatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttg 248  Q
    ||| || | |||||  | || | |||||||||||||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||    
T  28226968 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 28227067  T
Q  249 tccacatcatt 259  Q
    |||||||||||    
T  28227068 tccacatcatt 28227078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 26342190 - 26341993
Alignment:
Q  62 ggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcac 161  Q
    ||||| ||||| ||| |||| | ||||||  ||||| ||||| ||| ||| || |||||||||||||||||||| ||||||||| ||||  |||  ||||    
T  26342190 ggttttactggcaatatctatagagctctatgtgacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcac 26342091  T
Q  162 tcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    | || |||||||||||||| || ||||||||||| ||  | || || ||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  26342090 ttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcatt 26341993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 26622883 - 26623104
Alignment:
Q  38 ttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaag 137  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||   ||||||||||| || ||||||||| | || ||||||     
T  26622883 ttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaa 26622982  T
Q  138 gaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgctt 237  Q
    |||| ||||||||   ||| ||||| |  || || || ||||| ||||||||||| || |||||||||||   ||||||||| | |||||  ||||| ||    
T  26622983 gaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgttt 26623082  T
Q  238 ggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||||||||    
T  26623083 ggatgaacttgtccacatcatt 26623104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 259
Target Start/End: Original strand, 26728861 - 26729082
Alignment:
Q  38 ttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaag 137  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||  ||||   ||||||||||| || ||||||||| | || ||||||     
T  26728861 ttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaa 26728960  T
Q  138 gaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgctt 237  Q
    |||| ||||||||   ||| ||||| |  || || || ||||| ||||||||||| || |||||||||||   ||||||||| | |||||  ||||| ||    
T  26728961 gaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgttt 26729060  T
Q  238 ggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||||||||    
T  26729061 ggatgaacttgtccacatcatt 26729082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 27677894 - 27677673
Alignment:
Q  38 ttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaag 137  Q
    |||||||| ||||||||||| | ||||||||| || ||||||||||| ||||||  ||||   ||||||||||| || |||||  ||   || ||||||     
T  27677894 ttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaa 27677795  T
Q  138 gaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgctt 237  Q
    |||| || |||||  |||| |||||  | || ||||||||||| ||||||||||| ||  |||||||||| |||||||||||||||||||  ||||| ||    
T  27677794 gaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgttt 27677695  T
Q  238 ggacgaacttgtccacatcatt 259  Q
    ||||||||||||||||||||||    
T  27677694 ggacgaacttgtccacatcatt 27677673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 255
Target Start/End: Complemental strand, 27718626 - 27718442
Alignment:
Q  71 ggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaag 170  Q
    |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||| | || |    
T  27718626 ggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaagg 27718527  T
Q  171 ccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacat 255  Q
    ||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  27718526 ccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacat 27718442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 28181018 - 28181242
Alignment:
Q  35 agcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttc 134  Q
    ||||| |||||  ||||||||||||  ||||| |||||||||||| | | ||||||| |||||   |||||||  || || || ||||| || |||||||    
T  28181018 agctttagaggtggtgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttc 28181117  T
Q  135 aaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttg 234  Q
    |||||||||| |||||| || | |||||  | || ||||||||||| |||||||||||||| || || || || ||||| ||||| |||||||  |||||    
T  28181118 aaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttg 28181217  T
Q  235 cttggacgaacttgtccacatcatt 259  Q
    |||||||||||||||||||||||||    
T  28181218 cttggacgaacttgtccacatcatt 28181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 259
Target Start/End: Original strand, 28185270 - 28185494
Alignment:
Q  35 agcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttc 134  Q
    ||||| ||||| |||||||||||||   |||| |||||||||||| | | ||||||| |||||   |||||||  || || || ||||| || |||||||    
T  28185270 agctttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttc 28185369  T
Q  135 aaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttg 234  Q
    |||||||||| |||||| || | |||||  | || ||||||||||| |||||||||||||| || || || || ||||| ||||| |||||||  |||||    
T  28185370 aaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttg 28185469  T
Q  235 cttggacgaacttgtccacatcatt 259  Q
    |||||||||||||||||||||||||    
T  28185470 cttggacgaacttgtccacatcatt 28185494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 27611276 - 27611065
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||| | |||| |    
T  27611276 ggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggag 27611177  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  27611176 atgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacga 27611077  T
Q  244 acttgtccacat 255  Q
    ||||||||||||    
T  27611076 acttgtccacat 27611065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 27725119 - 27724908
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  27725119 ggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 27725020  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  27725019 atgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacga 27724920  T
Q  244 acttgtccacat 255  Q
    ||||||||||||    
T  27724919 acttgtccacat 27724908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 26802355 - 26802566
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| ||||||||| | |||||| || || ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  26802355 ggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 26802454  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||    ||||||||||||||    
T  26802455 atgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacga 26802554  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  26802555 acttgttcacat 26802566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 27698768 - 27698557
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  27698768 ggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 27698669  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || |||||||| |||||||||||||| || |||||||||||  |||||||||| |||||||  ||||| ||||||||    
T  27698668 atgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacga 27698569  T
Q  244 acttgtccacat 255  Q
    ||||||||||||    
T  27698568 acttgtccacat 27698557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 27706688 - 27706461
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| ||||||||  |||||||||| | ||||||||| || ||||||||||| ||| ||  ||||   ||||||||||| || |||||  ||   || |    
T  27706688 ctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaac 27706589  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    ||||| || | || |||||  |||| |||||  | || ||||||||||| ||||||||||| || ||||||||||| |||| ||||||||||||||  ||    
T  27706588 ttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcatt 27706489  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||||||||||||||    
T  27706488 ttgtttggacgaacttgtccacatcatt 27706461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 26884064 - 26884287
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| ||||||  | ||   ||||||||||| || ||||||||||   | |    
T  26884064 ctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatc 26884163  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    ||| | ||||   ||||||  |||| |||||| | || ||||||||||||||||| ||||| || ||  | ||||| | ||||||||| |||||||  ||    
T  26884164 ttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcatt 26884263  T
Q  232 ttgcttggacgaacttgtccacat 255  Q
    ||| ||||||||||||||||||||    
T  26884264 ttgtttggacgaacttgtccacat 26884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 28325391 - 28325605
Alignment:
Q  41 agaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggag 140  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||| |||| ||       |||| |  || || |||||||| |  || |||||| |||    
T  28325391 agaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgag 28325490  T
Q  141 gtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttgga 240  Q
    ||||||||||| ||||||||||  | || ||||||||||| |||||||||||||| ||| | || || ||||| ||||| |||||||  |||||||||||    
T  28325491 gtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttgga 28325590  T
Q  241 cgaacttgtccacat 255  Q
     ||||||||||||||    
T  28325591 tgaacttgtccacat 28325605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 28297915 - 28297772
Alignment:
Q  116 attgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaact 215  Q
    |||||||| || |||||| ||||||||||||||||| |||| |||||  | ||   |||||||||  ||||||||||||| ||||| || || | ||| |    
T  28297915 attgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaatt 28297816  T
Q  216 atgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  28297815 atgcttcttcttcattttgcttggacgaacttgtccacatcatt 28297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 259
Target Start/End: Original strand, 28514158 - 28514301
Alignment:
Q  116 attgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaact 215  Q
    |||||||| || |||||| ||||||||||||||||| |||| |||||  | ||   |||||||||  ||||||||||||| ||||| || || | ||| |    
T  28514158 attgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaatt 28514257  T
Q  216 atgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  28514258 atgcttcttcttcattttgcttggacgaacttgtccacatcatt 28514301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26823879 - 26823968
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||||||||| ||||||||||| || |||||||||||   |||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcatt 26823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 26936995 - 26937219
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| ||||||||||  |||||||| |||  ||| | |||  |||| |||||||||||| |||| |||||||| | ||| || |||||||| | |||||    
T  26936995 ctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctctttgtgattgtggaattcgcaccttcattgatgacaaggagc 26937094  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | || ||||| || |||||  |||| ||||| || || || |||||||| ||  |||||  ||| ||||| || || |||||||||||| ||||||  ||    
T  26937095 tccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctctatcaactatgccacttcttcatt 26937194  T
Q  232 ttgcttggacgaacttgtccacatc 256  Q
    ||| |||||||||||||||||||||    
T  26937195 ttgtttggacgaacttgtccacatc 26937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 28781052 - 28781263
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || || ||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  28781052 ggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 28781151  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||    ||||||||||||||    
T  28781152 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacga 28781251  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  28781252 acttgttcacat 28781263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 26893774 - 26893530
Alignment:
Q  15 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 114  Q
    |||| ||||||||||| ||||  || ||||||  |||||||||||| ||||| || ||  |||| || ||||||||| ||||  ||||||| ||||| ||    
T  26893774 tcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattcacacctt 26893675  T
Q  115 tattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaac 214  Q
     ||||||||||  ||||||||  ||||||||||||| ||||| |||||  | || || |||||||| |||| ||| | ||| || ||  | || ||||||    
T  26893674 cattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctctatcaac 26893575  T
Q  215 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| |||||| | ||||| ||||| ||||| ||| | ||||||    
T  26893574 tatgcttcttctatattttgtttggaagaactcgtcaaaatcatt 26893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 259
Target Start/End: Original strand, 26861517 - 26861744
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||| |||||||| ||||||||||| |  ||||| || || ||||||||||| ||||||  ||||   ||||| ||||| || || |||||| | || |    
T  26861517 ctcagtttcagaggaagtgacactcggtatggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaac 26861616  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    ||||| |||| || |||||   |   |||||||  || ||||||||||| ||||| |||||||| |||||||||||   ||||||||||||||| |  ||    
T  26861617 ttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcatt 26861716  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| ||||| ||||||||||| ||||||    
T  26861717 ttgtttggatgaacttgtccaaatcatt 26861744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 28786191 - 28786402
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  28786191 ggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 28786290  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| | ||    ||||||||||||||    
T  28786291 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacga 28786390  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  28786391 acttgttcacat 28786402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 28792312 - 28792523
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  28792312 ggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 28792411  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| | ||    ||||||||||||||    
T  28792412 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacga 28792511  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  28792512 acttgttcacat 28792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 25579705 - 25579847
Alignment:
Q  117 ttgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaacta 216  Q
    |||||||||  || |||||| |||| || |||||  |||| ||||| || || ||||||||||||||||||||||| || ||  | |||||   ||||||    
T  25579705 ttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaacta 25579804  T
Q  217 tgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||| |||||||  ||||| ||||||||||||||||||||||||    
T  25579805 tgcatcttcttcattttgtttggacgaacttgtccacatcatt 25579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 28149912 - 28150061
Alignment:
Q  105 tccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgtt 204  Q
    ||||||| || |||||||||| ||||||| || |||| ||||||||  |||| |||||| | || ||||||||||| || ||||||||||| ||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  205 ttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacat 255  Q
     || ||||||||| | |||||||  ||||| ||||||||||||||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacat 28150061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 259
Target Start/End: Original strand, 26142844 - 26142993
Alignment:
Q  110 acttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttcca 209  Q
    ||||| ||||||||||  || ||| || |||| || |||||  |||| ||||| || || ||||||||||||||||||||||| || ||  | |||||      
T  26142844 actttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctg 26142943  T
Q  210 tcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
     ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26142944 ccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26142993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 27604853 - 27604764
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||||||| ||||| |||||||| || ||||||||||| ||||| |||||||||||||  ||||| ||||| |||||||| |||||||||    
T  27604853 gccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcatt 27604764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 2184324 - 2184416
Alignment:
Q  167 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||||||||||||| || || |||||||||||||| || || |  |||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  2184324 aaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaacttgtccacatcatt 2184416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 2184866 - 2185026
Alignment:
Q  99 gtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccc 198  Q
    ||||| |||||||||| || |||||    ||||||||| |||| |  |||||| |||| || || || ||||||||||||||||| || |||||||||||    
T  2184866 gtggagtccacactttcatggatgacgaagagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccc 2184965  T
Q  199 tgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||| || || |   ||||||| |||||||  ||||| ||||||||||||||||| ||||||    
T  2184966 tgttttctcaaaggactatgcttcttcttcattttgtttggacgaacttgtccatatcatt 2185026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 26656011 - 26656117
Alignment:
Q  153 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 252  Q
    |||| |||||||| || |||||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  26656011 caccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 26656110  T
Q  253 catcatt 259  Q
    |||||||    
T  26656111 catcatt 26656117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 26761982 - 26762088
Alignment:
Q  153 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 252  Q
    |||| |||||||| || |||||||||||||| |||||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  26761982 caccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 26762081  T
Q  253 catcatt 259  Q
    |||||||    
T  26762082 catcatt 26762088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 259
Target Start/End: Original strand, 25481721 - 25481870
Alignment:
Q  110 acttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttcca 209  Q
    ||||| |||||||| |  || |||||| |||| || |||||  |||| ||||| || || ||||||||||||||||||||||  || ||  | |||||      
T  25481721 actttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctg 25481820  T
Q  210 tcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
     ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  25481821 ccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 25481870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 27338230 - 27338124
Alignment:
Q  153 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 252  Q
    |||| ||||| || || ||||||||||| ||||||||||| || ||  | |||||    |||||||| |||||||  |||||||||||||||||||||||    
T  27338230 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27338131  T
Q  253 catcatt 259  Q
    |||||||    
T  27338130 catcatt 27338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 27398970 - 27398864
Alignment:
Q  153 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 252  Q
    |||| ||||| || || ||||||||||| ||||||||||| || ||  | |||||    |||||||| |||||||  |||||||||||||||||||||||    
T  27398970 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27398871  T
Q  253 catcatt 259  Q
    |||||||    
T  27398870 catcatt 27398864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26048884 - 26048973
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| ||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26048884 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26048973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26070053 - 26070142
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| ||||||||||||||||| || ||  | |||||   ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26070053 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26070142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 28098625 - 28098428
Alignment:
Q  62 ggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcac 161  Q
    ||||| |||||||||||||||||||||||| ||||| | ||| ||| ||| || |||||  |||  || ||||| | ||||||   |||  |||  || |    
T  28098625 ggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatccc 28098526  T
Q  162 tcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    | || || ||||| ||||| || |||||||| || || || || || |  |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  28098525 ttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcatt 28098428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 257
Target Start/End: Complemental strand, 27531454 - 27531258
Alignment:
Q  61 cggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtca 160  Q
    |||||| || |||||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| || |||||  |||| |||    
T  27531454 cggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 27531355  T
Q  161 ctcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatca 257  Q
    ||   ||| ||||||||| ||||||||||||| || || || |||||    |||||||| |||||||  ||||| |||||||||||||| |||||||    
T  27531354 ctaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatca 27531258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 26848741 - 26848788
Alignment:
Q  212 aactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcatt 26848788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 27229145 - 27229347
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || || ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  27229145 ggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 27229244  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    |||||||  |||| |||||||| || |||||||| |||||| ||||||| || ||  | |||||   ||||||||| |||||||  ||||| ||| ||||    
T  27229245 acgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacga 27229344  T
Q  244 act 246  Q
    |||    
T  27229345 act 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26055965 - 26056054
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| ||||||||| ||||||| || ||  | |||||   ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26055965 gccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26056054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 26075935 - 26076024
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| ||||||||| ||||||| || ||  | |||||   ||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26075935 gccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26076024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 26635774 - 26635818
Alignment:
Q  215 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26635774 tatgcttcttctttgttttgtttggatgaacttgtccacatcatt 26635818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 26741740 - 26741784
Alignment:
Q  215 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26741740 tatgcttcttctttgttttgtttggatgaacttgtccacatcatt 26741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 25507057 - 25507002
Alignment:
Q  170 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    ||||||||||||||||||||||| || || ||  |||| |||||||||||||||||    
T  25507057 gccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 25538562 - 25538668
Alignment:
Q  153 caccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttgtcca 252  Q
    |||| ||||| || || ||||| ||||||||||| ||||| || ||  | |||||   ||||||||| |||||||  ||||| |||||||||||||||||    
T  25538562 caccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtcca 25538661  T
Q  253 catcatt 259  Q
     ||||||    
T  25538662 gatcatt 25538668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 26975134 - 26975180
Alignment:
Q  213 actatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcatt 26975180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 26949580 - 26949693
Alignment:
Q  50 gacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaa 149  Q
    |||||||| ||||||||||| || |||||||| ||||||||   ||||   |||||||  || || |||||||||| |||||||||   |||||||||||    
T  26949580 gacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaa 26949679  T
Q  150 tatcaccgtcactc 163  Q
    |  |||| ||||||    
T  26949680 tcacaccttcactc 26949693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 27214347 - 27214436
Alignment:
Q  61 cggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaat 150  Q
    ||||||||| || |||||||| ||||||||| |||||   |||||||  || || |||||||| | |||||||||  |||||||||||||    
T  27214347 cggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaat 27214436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 27234881 - 27234792
Alignment:
Q  61 cggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaat 150  Q
    ||||||||| || |||||||| ||||||||| |||||   |||||||  || || |||||||| | |||||||||  |||||||||||||    
T  27234881 cggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaat 27234792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 25071578 - 25071678
Alignment:
Q  50 gacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaa 149  Q
    |||||||| |||||||| || || ||||| || |||||||||  ||||   ||||||||||| ||||||||||| |  |||||| |  ||||||||||||    
T  25071578 gacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaa 25071677  T
Q  150 t 150  Q
    |    
T  25071678 t 25071678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 18679840 - 18679613
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||||||||| |||||||||||||||  |||||| |||||  |||||||||| ||||||  ||||   ||||||||||| || ||||||||  | || |    
T  18679840 ctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacc 18679741  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | ||| |||| || |||||   ||| |||||||  || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||    
T  18679740 tgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcatt 18679641  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| ||||||||||||||||||||||||    
T  18679640 ttgtttggacgaacttgtccacatcatt 18679613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 258
Target Start/End: Complemental strand, 18731777 - 18731551
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||||||||| |||||||||||||||  |||||| |||||  ||||||||| |||||||  ||||   ||||||||||| || ||||||||  | || |    
T  18731777 ctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacc 18731678  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | ||| |||| || |||||   ||| |||||||  || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||    
T  18731677 tgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcatt 18731578  T
Q  232 ttgcttggacgaacttgtccacatcat 258  Q
    ||| |||||||||||||||||||||||    
T  18731577 ttgtttggacgaacttgtccacatcat 18731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 258
Target Start/End: Complemental strand, 18724358 - 18724132
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||||||||| |||||||||||||||  |||||| |||||  |||||||||| ||||||  ||||   ||||||||||| || ||||||||  | || |    
T  18724358 ctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacc 18724259  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | ||| |||| || |||||   ||| |||||||  || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||    
T  18724258 tgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcatt 18724159  T
Q  232 ttgcttggacgaacttgtccacatcat 258  Q
    ||| ||| |||||||||||||||||||    
T  18724158 ttgtttgaacgaacttgtccacatcat 18724132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 18655750 - 18655523
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||||||||| |||||||||||||||  |||||| |||||  |||||||||||||||||  ||||   ||||||||||| || ||||||||  | ||||    
T  18655750 ctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagc 18655651  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | ||| | || || |||||   ||| |||||||  || |||||| |||| |||||||| || || ||||||||||| |||||||||||||||||||  ||    
T  18655650 tgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcatt 18655551  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| |||||||||||||||| |||||||    
T  18655550 ttgtttggacgaacttgtccgcatcatt 18655523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 18699673 - 18699446
Alignment:
Q  32 ctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagc 131  Q
    ||||||||||| |||| ||||||||||  |||||| |||||  |||||||||||||||||  ||||   ||||||||||| || ||||||||  | || |    
T  18699673 ctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacc 18699574  T
Q  132 ttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgtt 231  Q
    | ||| | || || |||||   ||| |||||||  || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||  ||    
T  18699573 tgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcatt 18699474  T
Q  232 ttgcttggacgaacttgtccacatcatt 259  Q
    ||| |||||||||||||| |||||||||    
T  18699473 ttgtttggacgaacttgttcacatcatt 18699446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 5091252 - 5091020
Alignment:
Q  20 tacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattg 119  Q
    ||||| |||||||| || || |||||||  |||||||||| |||||| ||||||||||||||  ||||||| |||| |   ||||| ||||| || ||||    
T  5091252 tacgacgtctttcttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattg 5091153  T
Q  120 atgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgc 219  Q
    |||| || ||||||||  |||| ||| ||||| ||||||||||  | || |||||| ||||||||| |||| ||||    || || || | | |||||||    
T  5091152 atgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgc 5091053  T
Q  220 ctcttctttgttttgcttggacgaacttgtcca 252  Q
     ||||||| |||||| || || |||||||||||    
T  5091052 ttcttcttcgttttgtttagatgaacttgtcca 5091020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 259
Target Start/End: Original strand, 34635 - 34853
Alignment:
Q  41 agaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggag 140  Q
    ||||| ||||||||||| |  ||||| || | ||||||||| | ||||||| || ||   ||||||||||| || |||||||| ||||||||||||||||    
T  34635 agaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaaggag 34734  T
Q  141 gtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttgga 240  Q
    | || |||||| |||| |||||  | || ||||||||||| |||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||    
T  34735 gagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttgga 34834  T
Q  241 cgaacttgtccacatcatt 259  Q
    |||||||||||||||||||    
T  34835 cgaacttgtccacatcatt 34853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 259
Target Start/End: Original strand, 42858 - 43094
Alignment:
Q  23 gatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatg 122  Q
    |||||||| || || || ||||| |||||||||||||  ||||| ||||||||||||||||||| |||| || |    ||||| | ||| || |||||||    
T  42858 gatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatg 42957  T
Q  123 atagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctc 222  Q
    | || || |||| |||||||||| ||||| |||| |||||  | || ||||||||||| |||||||||||||| ||||| || || ||||| ||||| ||    
T  42958 acagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttc 43057  T
Q  223 ttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||||  ||||||||||||||||||||||||||||||    
T  43058 ttcttcattttgcttggacgaacttgtccacatcatt 43094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 259
Target Start/End: Original strand, 27366 - 27576
Alignment:
Q  49 tgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaa 148  Q
    |||||||||||  ||||| ||||||||||||||||  | |||| || |    ||||| ||||| ||  |||||||||| ||||||||||||||||| |||    
T  27366 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 27465  T
Q  149 atatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacgaacttg 248  Q
    ||| || | |||||  | || | |||||||||||||||||||||||| ||||| || || ||||| ||||| |||||||  |||||||||||||||||||    
T  27466 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 27565  T
Q  249 tccacatcatt 259  Q
    |||||||||||    
T  27566 tccacatcatt 27576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 255
Target Start/End: Original strand, 116706 - 116920
Alignment:
Q  41 agaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggag 140  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||| |||| ||       |||| |  || || |||||||| |  || |||||| |||    
T  116706 agaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgag 116805  T
Q  141 gtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttgga 240  Q
    ||||||||||| ||||||||||  | || ||||||||||| |||||||||||||| ||| | || || ||||| ||||| |||||||  |||||||||||    
T  116806 gtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttgga 116905  T
Q  241 cgaacttgtccacat 255  Q
     ||||||||||||||    
T  116906 tgaacttgtccacat 116920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 268636 - 268403
Alignment:
Q  26 gtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgata 125  Q
    ||||| |||| |||||||||| |||||||||||   ||||| | |||  |||||||||| ||||||  ||||   ||||||||||| || |||||||||     
T  268636 gtcttcctcaacttcagaggcggtgacactcgtgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatc 268537  T
Q  126 gggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    | || |||||| |||| || |||||   ||| |||||||  || ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||    
T  268536 gtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 268437  T
Q  226 tttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||  ||||| ||||||||||||||||||||||||    
T  268436 ttcattttgtttggacgaacttgtccacatcatt 268403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 28127970 - 28127725
Alignment:
Q  15 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 114  Q
    |||||||| | || || ||||||||||| |||||||||||||||  ||||||||||||  |||||||||| || |||  ||||   ||||||||||| ||    
T  28127970 tcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacatt 28127871  T
Q  115 tattgatgatagggagcttcaaggaggtgacgaaa-tatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaa 213  Q
     ||||||||| |  | ||| |  |||| ||  ||| |  ||||||||||  |||| ||||||||||||||||| ||||| || ||||| ||||| | |||    
T  28127870 cattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaa 28127771  T
Q  214 ctatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||    
T  28127770 ctatgcctcttcttcattttgtttggacgaacttgtgcacatcatt 28127725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 28164652 - 28164408
Alignment:
Q  15 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 114  Q
    |||||||| | || || ||||| || || |||||||||||||||  ||||||||||||  ||||||| || || |||   |||   ||||| ||||| ||    
T  28164652 tcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacatt 28164553  T
Q  115 tattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaac 214  Q
     ||||||||| | || ||| |  |||| || |||||  |||||||| || | || ||||||||| ||||| | ||||| || |||||||| || ||||||    
T  28164552 cattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaac 28164453  T
Q  215 tatgcctcttctttgttttgcttggacgaacttgtccacatcatt 259  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||    
T  28164452 tatgcctcttcttcattttgtttggacgaacttgtccacatcatt 28164408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 58565 - 58341
Alignment:
Q  35 agcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttc 134  Q
    ||||| |||||  |||||||||| |  ||||| |||||||||||||||| ||||||| |||||   |||||||  || || || ||||| || |||||||    
T  58565 agctttagaggttgtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttc 58466  T
Q  135 aaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttg 234  Q
    ||||||||||||||||| |||| |||||  | || |||||| |||| |||||||||||||| || || || || ||||||||||| |||||||  |||||    
T  58465 aaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttg 58366  T
Q  235 cttggacgaacttgtccacatcatt 259  Q
    |||| ||||||||||||||||||||    
T  58365 cttgaacgaacttgtccacatcatt 58341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 44 - 259
Target Start/End: Complemental strand, 3696 - 3480
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  3696 ggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 3597  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaa-ctatgcctcttctttgttttgcttggacg 242  Q
    | |||||  |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||  ||||| |||||||    
T  3596 atgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacg 3497  T
Q  243 aacttgtccacatcatt 259  Q
    |||||||||||||||||    
T  3496 aacttgtccacatcatt 3480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 14629 - 14419
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| |    
T  14629 ggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag 14530  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || |||||||| |||||||||||||| || ||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  14529 atgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacga 14431  T
Q  244 acttgtccacat 255  Q
    ||||||||||||    
T  14430 acttgtccacat 14419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 29274062 - 29273829
Alignment:
Q  26 gtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgata 125  Q
    ||||| |||| ||| |||||| |||||||||||  |||||| | |||  ||||||||||  |||||  ||||   ||||||||||| || |||||||||     
T  29274062 gtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatc 29273963  T
Q  126 gggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    | || |||||| |||| || |||||   | | |||||||  || | ||||||||| ||||| ||||| || ||||||||||| |||||||||||||||||    
T  29273962 gtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttc 29273863  T
Q  226 tttgttttgcttggacgaacttgtccacatcatt 259  Q
    ||  ||||| ||||||||||||||||||||||||    
T  29273862 ttcattttgtttggacgaacttgtccacatcatt 29273829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 31903735 - 31903840
Alignment:
Q  15 tcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttt 114  Q
    |||| |||||||| || |||||||| ||||||   |||||||| |  ||||| ||||||||||||||||||||||||  |||    ||||||||||| ||    
T  31903735 tcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctt 31903834  T
Q  115 tattga 120  Q
    ||||||    
T  31903835 tattga 31903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 259
Target Start/End: Original strand, 3279601 - 3279816
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| ||||||||| |  ||||| |||||||||||||| | |||| |  ||||| ||||| ||  ||| || |||||||||||||||||||| |||||||    
T  3279601 ggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggattctgcaccttcattgatgatagggagcttcatggaggtg 3279700  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||  ||||| || || ||||| ||||| || | |||||| || || || || || ||||||||||| |||||| | ||||| ||||||||    
T  3279701 atgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacga 3279800  T
Q  244 acttgtccacatcatt 259  Q
    ||||||||||||||||    
T  3279801 acttgtccacatcatt 3279816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 4945 - 4734
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || |||||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  4945 ggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 4846  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| || |||   || |||||||| |||||||||||||| || ||||||||||| |||  |||||||| ||||| |||||| ||||||||    
T  4845 atgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacga 4746  T
Q  244 acttgtccacat 255  Q
    ||||||||||||    
T  4745 acttgtccacat 4734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 255
Target Start/End: Complemental strand, 13906 - 13695
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || || ||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  13906 ggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 13807  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    ||||||||||||||    
T  13806 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacga 13707  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  13706 acttgttcacat 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 7438 - 7649
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || || ||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  7438 ggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 7537  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttctttgttttgcttggacga 243  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    ||||||||||||||    
T  7538 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacga 7637  T
Q  244 acttgtccacat 255  Q
    |||||| |||||    
T  7638 acttgttcacat 7649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 191 - 10
Alignment:
Q  44 ggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtg 143  Q
    |||| |||||||||   |||||| || || ||||||||||| ||||||  ||||   |||||| | || || |||||||| |  || |||||| |||| |    
T  191 ggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggag 92  T
Q  144 acgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttc 225  Q
    | |||||  |||| |||||| | || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||| ||||    
T  91 atgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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