View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4711_low_1 (Length: 669)

Name: NF4711_low_1
Description: NF4711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4711_low_1
NF4711_low_1
[»] chr3 (19 HSPs)
chr3 (16-480)||(49786576-49787033)
chr3 (519-650)||(49786239-49786367)
chr3 (9-76)||(40793203-40793270)
chr3 (19-101)||(4489857-4489939)
chr3 (9-83)||(28939697-28939771)
chr3 (20-105)||(35424134-35424219)
chr3 (20-103)||(1995580-1995663)
chr3 (9-80)||(11467227-11467298)
chr3 (28-83)||(49644383-49644438)
chr3 (28-105)||(35496109-35496186)
chr3 (16-103)||(36177221-36177308)
chr3 (16-57)||(29096158-29096199)
chr3 (16-104)||(45266880-45266969)
chr3 (20-104)||(15877760-15877844)
chr3 (20-104)||(35846159-35846243)
chr3 (16-54)||(7352127-7352165)
chr3 (16-57)||(14898467-14898508)
chr3 (20-53)||(52313937-52313970)
chr3 (20-53)||(53464347-53464380)
[»] chr2 (17 HSPs)
chr2 (20-104)||(9104573-9104657)
chr2 (20-105)||(18565751-18565836)
chr2 (16-104)||(40095798-40095886)
chr2 (10-84)||(14657513-14657587)
chr2 (28-101)||(32914478-32914551)
chr2 (16-104)||(4897248-4897336)
chr2 (16-104)||(4944642-4944730)
chr2 (20-100)||(39375719-39375799)
chr2 (9-55)||(3384731-3384777)
chr2 (65-103)||(37258158-37258196)
chr2 (16-80)||(8322179-8322243)
chr2 (16-82)||(5147128-5147194)
chr2 (39-104)||(37069932-37069997)
chr2 (19-103)||(3739874-3739958)
chr2 (20-104)||(6858994-6859078)
chr2 (28-88)||(29984902-29984962)
chr2 (16-56)||(33386719-33386759)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-103)||(56599-56682)
[»] chr4 (15 HSPs)
chr4 (16-82)||(38567974-38568040)
chr4 (16-101)||(41377389-41377474)
chr4 (16-101)||(55875849-55875934)
chr4 (20-104)||(23560017-23560101)
chr4 (16-103)||(5415180-5415267)
chr4 (20-104)||(779897-779981)
chr4 (9-56)||(7907407-7907454)
chr4 (10-57)||(43355013-43355060)
chr4 (16-83)||(46382024-46382091)
chr4 (28-101)||(52327028-52327101)
chr4 (9-57)||(34388850-34388898)
chr4 (20-83)||(55876020-55876083)
chr4 (23-57)||(9268381-9268415)
chr4 (44-105)||(43264456-43264517)
chr4 (16-103)||(48262993-48263084)
[»] chr8 (10 HSPs)
chr8 (20-105)||(40278976-40279061)
chr8 (16-103)||(11425490-11425577)
chr8 (16-56)||(27594274-27594314)
chr8 (16-56)||(35158923-35158963)
chr8 (20-105)||(1156284-1156369)
chr8 (19-55)||(34954345-34954381)
chr8 (28-84)||(37479212-37479268)
chr8 (20-103)||(17312863-17312945)
chr8 (23-57)||(9682374-9682408)
chr8 (20-104)||(18227011-18227095)
[»] chr1 (13 HSPs)
chr1 (20-101)||(7900161-7900242)
chr1 (20-104)||(1035747-1035831)
chr1 (20-80)||(19322831-19322891)
chr1 (20-104)||(37457626-37457710)
chr1 (16-57)||(26707131-26707172)
chr1 (16-105)||(51613256-51613345)
chr1 (16-108)||(10574370-10574462)
chr1 (20-104)||(19993387-19993471)
chr1 (20-104)||(50428489-50428573)
chr1 (20-103)||(43496401-43496484)
chr1 (23-57)||(46823646-46823680)
chr1 (16-101)||(47394377-47394462)
chr1 (20-104)||(23571018-23571102)
[»] chr6 (6 HSPs)
chr6 (16-104)||(2844143-2844231)
chr6 (9-83)||(10682508-10682582)
chr6 (23-104)||(13685397-13685478)
chr6 (34-104)||(30775353-30775423)
chr6 (16-56)||(19763591-19763631)
chr6 (9-57)||(19789280-19789328)
[»] chr7 (13 HSPs)
chr7 (9-100)||(29681415-29681506)
chr7 (16-103)||(44396395-44396482)
chr7 (19-103)||(43692561-43692645)
chr7 (19-103)||(49081247-49081331)
chr7 (16-83)||(43598833-43598900)
chr7 (28-101)||(48252907-48252980)
chr7 (16-76)||(36725798-36725858)
chr7 (16-82)||(36118058-36118124)
chr7 (19-103)||(38346409-38346494)
chr7 (20-101)||(49080771-49080851)
chr7 (16-83)||(12879278-12879345)
chr7 (20-56)||(8404797-8404833)
chr7 (20-60)||(37626915-37626955)
[»] chr5 (7 HSPs)
chr5 (16-82)||(14593889-14593955)
chr5 (9-104)||(39060199-39060294)
chr5 (9-57)||(4925116-4925164)
chr5 (20-104)||(34769580-34769664)
chr5 (20-81)||(34383710-34383771)
chr5 (16-57)||(35470332-35470373)
chr5 (20-56)||(9959328-9959364)
[»] scaffold0110 (2 HSPs)
scaffold0110 (39-104)||(13803-13868)
scaffold0110 (39-104)||(21540-21605)


Alignment Details
Target: chr3 (Bit Score: 360; Significance: 0; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 16 - 480
Target Start/End: Complemental strand, 49787033 - 49786576
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccacttatcattatc 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49787033 atgaatatttataaaatatagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccactcatcattatc 49786934  T
Q  116 atatgggtggcatggatgtggaccatgt-gttgctct-aacaagatacgattaataatttggcaaagggaaatgagtagtaagctagaaaagagaacact 213  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49786933 atatgggtggcatggatggggaccatgtggttgctctaaaaaagatacaattaataatttggcaaagggaaatgagtagtaagctagaaaagagaacact 49786834  T
Q  214 gatatgctagaagtaatgtgtatatatatcatataccacagagattgatcaagtggcccgctgaatcatagagaatatctctacagctgccatgatcgca 313  Q
    ||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49786833 gatatgctagaagtaatgtat---------atataccacagagattgatcaagtggcccgctgaatcatagagaatatctctacagctgccatgatcgca 49786743  T
Q  314 agaatgaaggaggggaccctaaggtatgatcttatattatcgccacctcatcacttttcctaacaaaatacacgtacggtatatgctttaatactttgtc 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49786742 agaatgaaggaggggaccctaaggtatgatcttatattatcgccacctcatcacttttcctaacaaaatacacgtacggtatatgctttaatactttgtc 49786643  T
Q  414 atatagactacnnnnnnnnntgtacatatacaactgacagaatatgttgaaaaagggtgtattctat 480  Q
    |||||||||||         ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  49786642 atatagactacaaaaaaaaatgtacatatacaactgatagaatatgttgaaaaaggttgtattctat 49786576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 519 - 650
Target Start/End: Complemental strand, 49786367 - 49786239
Alignment:
Q  519 acaatacaagtaataagtttatcttttgcatggaatggtacgagatgaacagaggaagatgctagaaaatgattcatgcagtagcagtagcaaagaatat 618  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  49786367 acaacacaagtaataagtttatcttttgcatggaatggtacgagatgaacagagga---tgctagaaaatgattcatgcagtagcagtagcaaagaatat 49786271  T
Q  619 ccgtatactgcatcactcatcgatcccaatct 650  Q
    ||||||||||||||||||||||||||||||||    
T  49786270 ccgtatactgcatcactcatcgatcccaatct 49786239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 40793270 - 40793203
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataa 76  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | || |||| ||||||||    
T  40793270 gagtgatatgaatatttataaaatgtagttgagtggtttaaataattgaaaagtgagaagtaatataa 40793203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 4489857 - 4489939
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    |||||||||||||| || ||||||||| ||||||||||  || ||  |||||||||||||||||||||| |||||||||||||    
T  4489857 aatatttataaaatataattgagtggtataaataattggaatatataaaataatataatatattatatgtgtcccatttatac 4489939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 28939771 - 28939697
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||  ||| |||||||||||||||    
T  28939771 gagtgatatgaatatttagaaaatgtagttgagtagtttaaataattgagaagtgtgaagtaatataatatatta 28939697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 35424219 - 35424134
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    ||||||| |||||||||||||||||||||||||||||| |  |  ||| ||||||||| |||||| |||| |||||||||||||||    
T  35424219 atatttagaaaatgtagttgagtggtttaaataattgaaaaatgtgaagtaatataatgtattatgtgagacccatttataccact 35424134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 1995663 - 1995580
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||| ||||||||||| ||||||||||||||||| || ||  ||| ||||||||| |||||| || | |||||||||||||    
T  1995663 atatttagaaaatgtagttaagtggtttaaataattgggaagtgtgaagtaatataatgtattatgtgggacccatttatacca 1995580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 11467298 - 11467227
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatata 80  Q
    |||||| ||| ||||||| ||||||||||||| |||||||||||||||||| ||  ||| ||||||||||||    
T  11467298 gagtgatatggatatttagaaaatgtagttgattggtttaaataattgagaagtgtgaagtaatataatata 11467227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 49644383 - 49644438
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  49644383 aaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatta 49644438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 35496186 - 35496109
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    ||||||||||||| || ||||||||||||||| ||  ||| |||||||||||||||| |  | |||||||||||||||    
T  35496186 aaaatgtagttgaatgatttaaataattgagaagtgtgaagtaatataatatattatgtaggacccatttataccact 35496109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 36177221 - 36177308
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||| ||||||||| ||||||||| |||||||||  | ||  ||| ||||||||| |||||| || | |||||||||||||    
T  36177221 atgaatatttaaaaaatgtagatgagtggttcaaataattggaaagtgtgaagtaatataatctattatgtgggacccatttatacca 36177308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 29096199 - 29096158
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  29096199 atgaatatttaaataatgtagttgagtggtttaaataattga 29096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 45266880 - 45266969
Alignment:
Q  16 atgaatatttataaaatg-tagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||||||| |||||| ||||| |||||||||||| ||||||| ||  ||||||||||||| ||||   || | ||||||||||||||    
T  45266880 atgaatatttagaaaatgctagtttagtggtttaaatgattgagaagtgtgaaataatataatgtattcggtgtgacccatttataccac 45266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 15877844 - 15877760
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| ||||||||||||||||||||| || |  |  ||| ||||||||| |||||| || | ||||||||||||||    
T  15877844 atatttagaaaatatagttgagtggtttaaataatggaaaaatgtgaagtaatataatgtattatgtgggacccatttataccac 15877760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 35846243 - 35846159
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||||||||||| |||||||||||||||| | ||   |||||||||||  |||||  |||| ||||||||| ||||    
T  35846243 atatttagaaaatgtagttgaatggtttaaataattgaaaagtgtaaaataatataaagtattacgtgagacccatttattccac 35846159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 7352127 - 7352165
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataat 54  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  7352127 atgaatatttaaaaaatgtagttgaatggtttaaataat 7352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 14898467 - 14898508
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||    
T  14898467 atgaatatttagaaaatgtagtttagtggtttaaacaattga 14898508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 52313970 - 52313937
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataa 53  Q
    ||||||| ||||||||||||||||||||||||||    
T  52313970 atatttagaaaatgtagttgagtggtttaaataa 52313937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 53464380 - 53464347
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataa 53  Q
    ||||||| ||||||||||||||||||||||||||    
T  53464380 atatttagaaaatgtagttgagtggtttaaataa 53464347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 4e-21; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 9104657 - 9104573
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||||||||||||||||||||||||||||||  |  |||||||||||| |||||| ||||| ||||||||||||||    
T  9104657 atatttaaaaaatgtagttgagtggtttaaataattgagaattgtgaaataatataaaatattagatgagacccatttataccac 9104573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 18565751 - 18565836
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    ||||||| |||||||||||||||  ||||||||||||||| ||   || ||||||||| ||||||||||| |||||||||||||||    
T  18565751 atatttaaaaaatgtagttgagtcatttaaataattgagaagtcgaaagtaatataatgtattatatgagacccatttataccact 18565836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 40095798 - 40095886
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||   || ||||||||||||||| ||| |  |||||||||||||    
T  40095798 atgaatatttaaaaaatgtagttgagtagtttaaataattgagaagtgtaaagtaatataatatattagatggggtccatttataccac 40095886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 14657513 - 14657587
Alignment:
Q  10 agtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattat 84  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||  | ||  ||||||||||||| ||||||    
T  14657513 agtgatatgaatatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaaataatataatgtattat 14657587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 32914478 - 32914551
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    |||||||||||||||||||||||||||||| | ||  ||| |||||||| |||||||||| | |||||||||||    
T  32914478 aaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaaatattatatgggacccatttatac 32914551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 4897248 - 4897336
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |  |  ||| |||| |||||||||||||| |  |||||||||||||    
T  4897248 atgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttataccac 4897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 4944642 - 4944730
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |  |  ||| |||| |||||||||||||| |  |||||||||||||    
T  4944642 atgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttataccac 4944730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 39375719 - 39375799
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttata 100  Q
    ||||||| ||||| |||||||||||||||||||||||  |  || ||| ||||||||||||||||||||| | ||||||||    
T  39375719 atatttaaaaaatatagttgagtggtttaaataattggaaaatatgaagtaatataatatattatatgagactcatttata 39375799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 3384777 - 3384731
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataatt 55  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||    
T  3384777 gagtgatatgaatatttataaaatgtagttgaattgtttaaataatt 3384731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 37258196 - 37258158
Alignment:
Q  65 gaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  37258196 gaaataatataatatattatatgagacccatttatacca 37258158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8322179 - 8322243
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatata 80  Q
    ||||||||||  |||||||| ||||||||||||||||||||| | ||  ||| ||||||||||||    
T  8322179 atgaatatttgaaaaatgtaattgagtggtttaaataattgaaaagtgtgaagtaatataatata 8322243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 5147194 - 5147128
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatt 82  Q
    ||||||||||| ||||||||||||| || |||||||||| | || ||  || |||||||||||||||    
T  5147194 atgaatatttagaaaatgtagttgaatgatttaaataatagggaagtgtgagataatataatatatt 5147128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 37069932 - 37069997
Alignment:
Q  39 gagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||||||||||||||||| || ||   |||||||||| |||||||| || | ||||||||||||||    
T  37069932 gagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccac 37069997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 3739874 - 3739958
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    |||||||| || |||||| ||| || ||||||||||||| |  ||  |||||||||||| |||||| |||| || ||||||||||    
T  3739874 aatatttagaatatgtagatgaatgatttaaataattgaaaaatataaaataatataatgtattatgtgagacctatttatacca 3739958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 6859078 - 6858994
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| ||||| ||||||||||||||||| || ||  ||| ||||||| | |||||  || | ||||||||||||||    
T  6859078 atatttagaaaatatagtttagtggtttaaataattgggaagtgtgaagtaatatattgtattacgtgggacccatttataccac 6858994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 29984962 - 29984902
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatga 88  Q
    ||||| ||||||||| |||||||||||| ||| |||  ||||||||||||| |||| ||||    
T  29984962 aaaatttagttgagttgtttaaataattaagaagtataaaataatataataaattaaatga 29984902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 33386759 - 33386719
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||||||| |||||| | ||||||||||||||||||||    
T  33386759 atgaatatttagaaaatgcaattgagtggtttaaataattg 33386719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 56599 - 56682
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||| |||||||||||||||||||||||||||||||| ||   || |||||||||||||||| || |||||||||||||||    
T  56599 atatttagaaaatgtagttgagtggtttaaataattgagaagtgtaaagtaatataatatattatgtgggtcccatttatacca 56682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 7e-20; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 38567974 - 38568040
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatt 82  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  38567974 atgaatatttaaaaaatgtagttgagtggtttaaataattgaaaagtaagaagtaatataatatatt 38568040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 41377389 - 41377474
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||| ||  ||| |||||||||||||||| | || |||||||||||    
T  41377389 atgaatatttaaaaaatgtagttgagtagttaaaataattgagaagtgggaagtaatataatatattatgtaagacccatttatac 41377474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 55875849 - 55875934
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    ||||||||||| |||||||||||||||||||||| |||||||||  |  ||| ||||||||| |||||| || | |||||||||||    
T  55875849 atgaatatttaaaaaatgtagttgagtggtttaagtaattgagagatgtgaagtaatataatttattatgtgggacccatttatac 55875934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 23560101 - 23560017
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| |||||||||||||||||||||||||||||  | ||   || |||| ||||||||||| || ||||||||||||||||    
T  23560101 atatttagaaaatgtagttgagtggtttaaataattggaaagtgtaaagtaatgtaatatattatgtgggtcccatttataccac 23560017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 5415267 - 5415180
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||| ||||||||||||||||  ||||||||||| || ||   || |||||||||||||||| ||  ||||||||||||||    
T  5415267 atgaatatttagaaaatgtagttgagtgagttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttatacca 5415180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 779981 - 779897
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| ||||||||||||||||||||| || |  |  ||| ||||||||| |||||| |||| ||||||||||||||    
T  779981 atatttagaaaatatagttgagtggtttaaataatggaaaaatgtgaagtaatataatgtattatgtgagacccatttataccac 779897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7907407 - 7907454
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattg 56  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  7907407 gagtgatatggatatttagaaaatgtagttgagtggtttaaataattg 7907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 43355060 - 43355013
Alignment:
Q  10 agtgagatgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  43355060 agtgatatgaatatttaaaaaatgtaattgagtggtttaaataattga 43355013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 46382024 - 46382091
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    ||||||||||  ||||| |||| ||||||||||||||||||||| ||  ||| |||||||||||||||    
T  46382024 atgaatatttgaaaaatatagtggagtggtttaaataattgagaagtgtgaactaatataatatatta 46382091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 52327028 - 52327101
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    |||||||||||||||| ||||||||||||| | ||  ||| |||||||| ||||||| || | |||||||||||    
T  52327028 aaaatgtagttgagtgatttaaataattgaaaagtgtgaagtaatataaaatattatgtgggacccatttatac 52327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 34388898 - 34388850
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    |||||| ||||||||||| ||||||| ||| ||||||||||||||||||    
T  34388898 gagtgatatgaatatttagaaaatgtggtttagtggtttaaataattga 34388850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 55876083 - 55876020
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    ||||||| ||| ||||||||| | |||||||||||||||| ||  ||| |||||||||||||||    
T  55876083 atatttagaaagtgtagttgaatagtttaaataattgagaagtgtgaagtaatataatatatta 55876020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 9268415 - 9268381
Alignment:
Q  23 tttataaaatgtagttgagtggtttaaataattga 57  Q
    |||| ||||||||||||||||||||||||||||||    
T  9268415 tttagaaaatgtagttgagtggtttaaataattga 9268381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 43264517 - 43264456
Alignment:
Q  44 gtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    |||||||||||||||| ||  ||| |||||||||||||||  ||||  ||||||||||||||    
T  43264517 gtttaaataattgagaagtgtgaagtaatataatatattaggtgaggtccatttataccact 43264456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 48263084 - 48262993
Alignment:
Q  16 atgaatatttataaaatgtagttgag-tggtttaaataattgagatgt---aagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||| ||||||||||| |  || ||||||||||||| | ||   ||| |||| ||||||||||||| |||||| |||||||||||    
T  48263084 atgaatatttagaaaatgtagttaaaatgatttaaataattgaaaagtgtaaagtaatagtataatatattatgtgagtctcatttatacca 48262993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 40278976 - 40279061
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    ||||||| |||||||||||||||||||||||||||||  | |||  || |||||||||||||||| || |||||||||||||||||    
T  40278976 atatttagaaaatgtagttgagtggtttaaataattggaaagtataaagtaatataatatattatgtgggtcccatttataccact 40279061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 11425577 - 11425490
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||| ||||||||||||||| | ||||||||||| || ||   || |||||||||||||||| ||  ||||||||||||||    
T  11425577 atgaatatttagaaaatgtagttgagtcggttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttatacca 11425490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 27594274 - 27594314
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27594274 atgaatatttagaaaatgtagttgagtggtttaaataattg 27594314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 35158963 - 35158923
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  35158963 atgaatatttagaaaatgtagttgagtggtttaaataattg 35158923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 1156284 - 1156369
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    ||||||| || || ||||| ||||||||||||||||| || ||  ||||||||||| | |||||  |||| |||||||||||||||    
T  1156284 atatttagaagatatagtttagtggtttaaataattgggaagtgtgaaataatatattgtattacgtgagacccatttataccact 1156369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 34954381 - 34954345
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataatt 55  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34954381 aatatttaaaaaatgtagttgagtggtttaaataatt 34954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 37479212 - 37479268
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattat 84  Q
    |||||||||||||||||||||||||||||| | ||   || ||||||||||||||||    
T  37479212 aaaatgtagttgagtggtttaaataattgaaaagtttaaagtaatataatatattat 37479268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 17312863 - 17312945
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||| || ||||||||||||||||||||||||||| | ||  ||| ||||||||  |||||  |||| |||||||||||||    
T  17312863 atatttagaagatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgagacccatttatacca 17312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 9682374 - 9682408
Alignment:
Q  23 tttataaaatgtagttgagtggtttaaataattga 57  Q
    |||| ||||||||||||||||||||||||||||||    
T  9682374 tttagaaaatgtagttgagtggtttaaataattga 9682408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 18227011 - 18227095
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||||||||||  ||||||||||||||| || ||  ||  ||||||||| |||||| || | ||| ||||||||||    
T  18227011 atatttaaaaaatgtagttggatggtttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccac 18227095  T

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Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 7900242 - 7900161
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    ||||||| ||||||||||||||||||||||||||||| || |||  || |||||||||||||||| || |||||||||||||    
T  7900242 atatttagaaaatgtagttgagtggtttaaataattgggaagtataaagtaatataatatattatgtgggtcccatttatac 7900161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 1035831 - 1035747
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| ||||| |||||||||||||||||||| ||  ||||||||||| | ||||| ||| | ||||| ||||||||    
T  1035831 atatttagaaaatatagtttagtggtttaaataattgagaagtgtgaaataatatattgtattacatgggacccatatataccac 1035747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 19322831 - 19322891
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatata 80  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||| | | ||||||||||||    
T  19322831 atatttaaaaaatgtagttgaatggtttaaataattgagaagtatgtagtaatataatata 19322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 37457710 - 37457626
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| |||||||||||||| ||||||||||| ||  ||||||||||| | |||||  || | ||||||||||||||    
T  37457710 atatttagaaaatatagttgagtggttttaataattgagaagtgtgaaataatatattgtattacgtgggacccatttataccac 37457626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 26707131 - 26707172
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  26707131 atgaatatttagaaaatgtagttgaatggtttaaataattga 26707172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 51613345 - 51613256
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccact 105  Q
    |||| |||||| |||||||||||||||||||||||||||||  | ||  ||| ||||||||  |||||| || |  ||||||||||||||    
T  51613345 atgagtatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaattattatgtgggatccatttataccact 51613256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 10574370 - 10574462
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccacttat 108  Q
    ||||||||||| ||||| || ||||||| |||||||||||||||  |  ||| ||||||| |||||||| ||   | ||||||||||||||||    
T  10574370 atgaatatttaaaaaatataattgagtgatttaaataattgagaaatgtgaagtaatatattatattatgtggaactcatttataccacttat 10574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 19993387 - 19993471
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| |||||||||||||||||||||| | | ||   || |||||||||||||||| ||  |||||| ||||||||    
T  19993387 atatttagaaaatatagttgagtggtttaaataattaaaaagtgtaaagtaatataatatattatgtggatcccatctataccac 19993471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 50428489 - 50428573
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| |||||||||| ||||||||||||||| ||  ||| ||||||||| ||||   ||||  |||||||||||||    
T  50428489 atatttagaaaatatagttgagtgatttaaataattgagaagtgtgaagtaatataatttattgcgtgagatccatttataccac 50428573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 43496484 - 43496401
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||| ||||||||||||| | |||||||||||||||| ||  ||  ||||||||| |||||| || | ||| |||||||||    
T  43496484 atatttaaaaaatgtagttgaatagtttaaataattgagaagtgtgaggtaatataatgtattatgtgggacccgtttatacca 43496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 46823646 - 46823680
Alignment:
Q  23 tttataaaatgtagttgagtggtttaaataattga 57  Q
    |||| ||||||||||||||||||||||||||||||    
T  46823646 tttagaaaatgtagttgagtggtttaaataattga 46823680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 47394462 - 47394377
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    ||||||||||| |||||||||  |||| ||||||||||||| || ||  ||| ||||||||| |||||| ||   |||||||||||    
T  47394462 atgaatatttaaaaaatgtagacgagtagtttaaataattgggaagtgtgaagtaatataatgtattatgtggaacccatttatac 47394377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 23571018 - 23571102
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||| ||||||||| ||||||||||| || |  |  ||| ||||||||| |||||| || | ||||||||||||||    
T  23571018 atatttaaaaaatatagttgagttgtttaaataatggaaaaatgtgaagtaatataatgtattatgtgggacccatttataccac 23571102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 2844143 - 2844231
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||  ||| ||||||||| |||||| |||  | ||||||||||||    
T  2844143 atgaatatttaaaaaatgtagttgagtggtttaaataattgggaagtgtgaagtaatataatgtattatgtgaaactcatttataccac 2844231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 10682508 - 10682582
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    |||||| ||| ||||||  |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  10682508 gagtgacatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatta 10682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 13685478 - 13685397
Alignment:
Q  23 tttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||| ||||| |||||||||| ||||||||||||| | |||  |||||||||||| |||||| || | ||||||||||||||    
T  13685478 tttagaaaatatagttgagtgttttaaataattgaaaagtataaaataatataatgtattatgtgggacccatttataccac 13685397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 30775423 - 30775353
Alignment:
Q  34 tagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||||||||||||||||||||||| | ||  ||| ||||||||| |||||| |  | ||||||||||||||    
T  30775423 tagttgagtggtttaaataattgaaaagtgtgaagtaatataatgtattatgtaggacccatttataccac 30775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 19763631 - 19763591
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||||||| |||||||| || |||||||||||||||||    
T  19763631 atgaatatttagaaaatgtaattaagtggtttaaataattg 19763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 19789328 - 19789280
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    |||||| ||||||||||| |||||||| || |||| |||||||||||||    
T  19789328 gagtgatatgaatatttagaaaatgtaattaagtgatttaaataattga 19789280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 29681506 - 29681415
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttata 100  Q
    |||||| ||| ||||||||||||||||||| ||||||| ||||||||   || ||  ||||||||||||||||||| |||||| ||||||||    
T  29681506 gagtgatatggatatttataaaatgtagttaagtggttcaaataatttgaatatataaaataatataatatattatgtgagtctcatttata 29681415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 44396395 - 44396482
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    ||||||||||| ||||||||||||||||| ||||||||||| || ||   || |||||||||||||||| ||  ||||||||||||||    
T  44396395 atgaatatttagaaaatgtagttgagtgggttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttatacca 44396482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 43692561 - 43692645
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    |||||||| ||||| ||| |||||||||||||||||||||| ||  ||||||||||||| |||||| || | || ||||||||||    
T  43692561 aatatttaaaaaatttagatgagtggtttaaataattgagaagtgtgaaataatataatgtattatgtgggacctatttatacca 43692645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 49081247 - 49081331
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatacca 103  Q
    |||||||| ||||||||| ||| || ||||||||||||| |  ||  |||||||||||| ||||||||||| |||||||||||||    
T  49081247 aatatttagaaaatgtagatgaatgatttaaataattgaaaaatataaaataatataatgtattatatgagacccatttatacca 49081331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 43598833 - 43598900
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    ||||||||||  ||||| |||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  43598833 atgaatatttgaaaaatatagttgagtggtttaaataattgagaagtgtgaactaatataatatatta 43598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 48252907 - 48252980
Alignment:
Q  28 aaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    |||||||||||||||||||||||||||||  | ||  ||| |||||||| |||||||||| | |||||||||||    
T  48252907 aaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaaatattatatgggacccatttatac 48252980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 36725798 - 36725858
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataa 76  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||   |||||||||||    
T  36725798 atgaatatttagaaattgtagttgagtggtttaaataattgagaagtgtaaaataatataa 36725858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 36118124 - 36118058
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatt 82  Q
    ||||||||||| |||||||| |||||||||||||||||| |||| ||   |||||||||||| ||||    
T  36118124 atgaatatttagaaaatgtaattgagtggtttaaataatagagaagtgttaaataatataatgtatt 36118058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 38346494 - 38346409
Alignment:
Q  19 aatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataata-taatatattatatgagtcccatttatacca 103  Q
    |||||||| |||||||||||||||||||||||||||| | |  || ||| ||||| | |||||||||||| |  ||||||||||||    
T  38346494 aatatttaaaaaatgtagttgagtggtttaaataattaaaaaatatgaagtaatatttatatattatatggggtccatttatacca 38346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 49080851 - 49080771
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttatac 101  Q
    ||||||| ||||||||||  |||||||||||||||||| | ||  ||| |||||||||||||||| | || |||||||||||    
T  49080851 atatttaaaaaatgtagta-agtggtttaaataattgaaaagtgtgaagtaatataatatattatgtaagacccatttatac 49080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 12879345 - 12879278
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatta 83  Q
    ||||||||||| ||||| |||||| || |||||||||||||||| ||  ||| |||||||| ||||||    
T  12879345 atgaatatttagaaaatatagttgtgttgtttaaataattgagaagtgtgaagtaatataaaatatta 12879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 8404833 - 8404797
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8404833 atatttaaaaaatgtaattgagtggtttaaataattg 8404797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 37626915 - 37626955
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagat 60  Q
    ||||||| ||||| ||||||||| |||||||||||||||||    
T  37626915 atatttaaaaaatatagttgagttgtttaaataattgagat 37626955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 14593955 - 14593889
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatatt 82  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |  ||| ||||||||||||||    
T  14593955 atgaatatttataaaatgtaattgaatggtttaaataattgagatttgtgaagtaatataatatatt 14593889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 39060294 - 39060199
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||||| ||| ||||||| ||||| ||||||||||||||||||||| || | ||  ||| ||||||||| |||||| || | ||||||||||||||    
T  39060294 gagtgatatggatatttagaaaatatagttgagtggtttaaataatcgaaaagtgtgaagtaatataatgtattatgtgggacccatttataccac 39060199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 4925164 - 4925116
Alignment:
Q  9 gagtgagatgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  4925164 gagtgatatggatatttaaaaaatgtagttgagtggtttaaataattga 4925116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 34769580 - 34769664
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    ||||||| ||||||||||||| ||||||||||||||| || ||  ||  ||||||||| |||||| || | ||| ||||||||||    
T  34769580 atatttaaaaaatgtagttgaatggtttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccac 34769664  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 34383710 - 34383771
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattgagatgtaagaaataatataatatat 81  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||   || |||||||||||||    
T  34383710 atatttagaaaatgtagttttgtggtttaaataattgagaagtgtaaagtaatataatatat 34383771  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35470332 - 35470373
Alignment:
Q  16 atgaatatttataaaatgtagttgagtggtttaaataattga 57  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||    
T  35470332 atgaatatttagaaaatatagttgagtagtttaaataattga 35470373  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 9959328 - 9959364
Alignment:
Q  20 atatttataaaatgtagttgagtggtttaaataattg 56  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  9959328 atatttagaaaatgtagttgagtagtttaaataattg 9959364  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 13868 - 13803
Alignment:
Q  39 gagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||||||||||||||||| || ||   |||||||||| |||||||| || | ||||||||||||||    
T  13868 gagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccac 13803  T

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Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 21605 - 21540
Alignment:
Q  39 gagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccac 104  Q
    |||||||||||||||||| || ||   |||||||||| |||||||| || | ||||||||||||||    
T  21605 gagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccac 21540  T

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