View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4712_low_5 (Length: 266)
Name: NF4712_low_5
Description: NF4712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4712_low_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 6 - 266
Target Start/End: Original strand, 5966748 - 5967008
Alignment:
| Q |
6 |
agtagcaaaggcaaaaaccatttccactcacgagcatttcacgtgcttacatgtcttgttagtgttctacagctttgcgttttggtctattaaggtattt |
105 |
Q |
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| T |
5966748 |
agtatcaaaggcaaaaaccatttccactcacgagcatttcacgtgtttacatgtcttgttagtgttctacagctttgcgttttggtctattaaggtattt |
5966847 |
T |
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| Q |
106 |
ttagattaaagtcataaagggacatggtttagacagaatccatagtgaatgctatcaagaaatatttaaagttcccatgtcccttatggttacacatttc |
205 |
Q |
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| T |
5966848 |
ttagattaaagtcataaagggacatggtttagacagaatccatagtgaatgctatcaagaaatatttaaagttcccatgtcccttatggttacacatttc |
5966947 |
T |
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| Q |
206 |
tctcccacaccttagggtttggattaatacaatggattccttggaccccataattcgacat |
266 |
Q |
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| T |
5966948 |
tctcccacaccttagggtttggattaatacaatggattccttggaccccataattcaacat |
5967008 |
T |
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