View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4714-Insertion-10 (Length: 172)
Name: NF4714-Insertion-10
Description: NF4714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4714-Insertion-10 |
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| [»] chr3 (2 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 62; Significance: 5e-27; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 33488937 - 33488872
Alignment:
| Q |
107 |
gcacacagtttctaaagctaaagtaaaaatctgcataataaactaacacaagcaaagagctgctat |
172 |
Q |
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| T |
33488937 |
gcacacagtttctaaagctaaagtaaaaatctgcataataaactaacagaagcaaagagctgctat |
33488872 |
T |
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Target: chr3; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 33489036 - 33488975
Alignment:
| Q |
8 |
gagacttggagcagcaagcagctggcaccatcacaaagaattaggaacactaaatcctgaac |
69 |
Q |
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| T |
33489036 |
gagacttggagcagcaagcagctggcaccatcacaaagaattaggaacactaaatcctgaac |
33488975 |
T |
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