View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4715-Insertion-1 (Length: 951)
Name: NF4715-Insertion-1
Description: NF4715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4715-Insertion-1 |
 | |
|
| [»] chr5 (23 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 490; Significance: 0; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Original strand, 29852496 - 29853461
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||| ||| |||||||||| | ||||||||||||| |
|
|
| T |
29852496 |
cataccatcctcagattcatcatcatctaagtatttcagattatccattttgaataataccaacttttttagatatggtagtttacaaagtaacggaagc |
29852595 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||||| | |||| | ||||| |||| |
|
|
| T |
29852596 |
cgcacaattttgttgcaattccgaagttcaagagaaattaaactactaagaaggcttatccaacttggtaacgataatccttcatagtaatttatgtcca |
29852695 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtctt-gta-----------gtatccccatgacaagca |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| || ||| | | |||||||||| || |
|
|
| T |
29852696 |
agcacttgagatttgagtgaggttgaagctcttcgagtacttgctcatcatgaatagttgggggctcagtaaatccatcattgctttcccatgacaaaca |
29852795 |
T |
|
| Q |
296 |
taattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgagg |
395 |
Q |
| |
|
||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| || |||||||| ||| |
|
|
| T |
29852796 |
taattcatgaatgtctgttttacccatcaaattagccgcttcagcttcagataaactgcccacatcttttaagcctttgatactcagctttccaccaagg |
29852895 |
T |
|
| Q |
396 |
tttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaaca |
495 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
29852896 |
tttagatcacataactctgtcaagctattccctttctctaaactaacaatgtacatgcttaatgttcttagacaagataatttgccaatgttaggaaaca |
29852995 |
T |
|
| Q |
496 |
tgagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttat |
595 |
Q |
| |
|
||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| | ||| ||||||||||| |
|
|
| T |
29852996 |
tgagagacaaagatcgacatcctttaatgactatatgtctaagattttgtaagcaagccaagtgtttcgggagacaactcagttcaccgcagtcttttat |
29853095 |
T |
|
| Q |
596 |
tttcaagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccct |
695 |
Q |
| |
|
|||||| |||||||| |||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
29853096 |
tttcaatatttccagtttttgtaagttgtaaattgagtccggcaacatttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactttct |
29853195 |
T |
|
| Q |
696 |
agtgataatacctgggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatattta------ttcaagtta---a |
786 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| || | ||| | | | ||| ||||||||| | |
|
|
| T |
29853196 |
agtgataatacatgggatatgcataaaacccgaagagagcggtttaatgggaagtgatcatatttttttgcaaaaaaattaggattcttcaagttaaaca |
29853295 |
T |
|
| Q |
787 |
ccaatgttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaact |
886 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||||| |
|
|
| T |
29853296 |
acaatgttcgcaaggattcaacttttttaaaggcaccctcatcgaatgataacaaattatcggagttaaaacttatgtggtgtgtgctttttgtcaaact |
29853395 |
T |
|
| Q |
887 |
agtcaagtttgccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||| |||||| ||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
29853396 |
agtcatgtttgcattctccaaatacacacattcttgccccattactgattgagcgagatcatggac |
29853461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Complemental strand, 30243278 - 30242328
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
30243278 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatttcgaataattccagtttttttagatatggtagtttaccaagtaacggaagc |
30243179 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||| | |||| | |||| | || |
|
|
| T |
30243178 |
cgcacaattttgttgcaattccgaagttcaagagaaattaaattactaagaagaattatccaacttggtaaggataatccctcatagaaacttattttca |
30243079 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagt-atccccatgacaagcataattgatgaa |
306 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | | || ||| | || ||||||||||||||||| ||||| |
|
|
| T |
30243078 |
agcacttgagatttgagtgaggttgaagcacttcaagtacttgctcagcactaattatagat-tcatgttgggatatccatgacaagcataattcatgaa |
30242980 |
T |
|
| Q |
307 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||||||||||| |
|
|
| T |
30242979 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaagtgttggatactcagttttccaccgaggtttagatcacg |
30242880 |
T |
|
| Q |
407 |
taactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaa |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
30242879 |
taactctgtcaagctattccctttctctaaactaacaatatacacacttaatgttcttagacaagttaattttccaatgttaggaaacatgagagacaaa |
30242780 |
T |
|
| Q |
507 |
gaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagattt |
606 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||||||| |
|
|
| T |
30242779 |
gaccgacattctttaatgactatatgtctaagattttgtaagcaagccaagtgttttgggagacaactcagtttacgacaatgttttattttcaagattt |
30242680 |
T |
|
| Q |
607 |
ccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatac |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30242679 |
ccagcttttttaggttgtaaattgagtcaggcaaatttttgatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggcat |
30242580 |
T |
|
| Q |
707 |
ctg------ggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaag |
800 |
Q |
| |
|
| | |||| |||||||||||||||||||| ||| | ||| |||| ||||| || | || | ||| | | |||| | || |||||||| |||| |
|
|
| T |
30242579 |
ccggataaaggatgtgcataaaacccgaagagaaaggtatgttgggaagttatcatgtttttttttggcataataactcaactgaaacaatgttctcaag |
30242480 |
T |
|
| Q |
801 |
gattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgcct |
900 |
Q |
| |
|
||||||||||||||||| | | | ||| || |||||||| | |||| |||| |||| ||||||||||||||| |||||||||| |||| |||| | |
|
|
| T |
30242479 |
gattcaacttttttgaaagcattcttatcaaaggataacaagtctttgtagtcaaaaccaatgtggtgtgtgctttttgacaaactggtcatgtttttgt |
30242380 |
T |
|
| Q |
901 |
tctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| ||||| ||||||||||| |
|
|
| T |
30242379 |
tctccaaatacatacattctggccccattactgattgagcgagatcatggac |
30242328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Original strand, 30435019 - 30435966
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| || ||| | || |||||||||||||| |||| |||||||||| |
|
|
| T |
30435019 |
cataccatcctcagattcatcatcatccaagtatttcagattattcataccatatactctaagtttttttagagatggtagtttaccaaataacggaagc |
30435118 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| |||||||||| |
|
|
| T |
30435119 |
cgcacaattttgttgcaatccccaagtttaagagaaattaaattactaagaataattatccaacttggtaacgataatccgtcatagcaatttatatcca |
30435218 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagt-atccccatgacaagcataattgatgaa |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| | | || ||| | || ||| ||||||||||||| ||||| |
|
|
| T |
30435219 |
agcacttgagatttgagtgaggttgaagctcttcgagtaattgctcagatctaattatagat-tcctgttgcgatatccacgacaagcataattcatgaa |
30435317 |
T |
|
| Q |
307 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacg |
406 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
30435318 |
ggtcttttttacccttcaaattagccgcttcagcttcagataaactaccaacattgtttaatcctttgatactcagttttccaccgaggtttagatcatg |
30435417 |
T |
|
| Q |
407 |
taactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaa |
506 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| || | ||| |
|
|
| T |
30435418 |
taactctgtcaagctatttcctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttgggaaacattcgaaataaa |
30435517 |
T |
|
| Q |
507 |
gaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagattt |
606 |
Q |
| |
|
|| | |||| |||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||| | || ||| | ||||||||||||||||| |
|
|
| T |
30435518 |
gatccacatccttcaatgactatatgtctaagattttgtaagcaaaccaagcgttttgggagacaactcagttcacgacaatattttattttcaagattt |
30435617 |
T |
|
| Q |
607 |
ccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtg---ataa |
703 |
Q |
| |
|
|||| |||| || |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| || || | |
|
|
| T |
30435618 |
ccagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacaaagttccaaataccttaaatgaattaaactccatactgggccttg |
30435717 |
T |
|
| Q |
704 |
tacctgggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaaggat |
803 |
Q |
| |
|
|| |||| ||| |||||| |||||||| | ||||||||| |||||||||| || | ||| ||||| || | ||||| || ||||||||| |||||| |
|
|
| T |
30435718 |
tagagaggatgtgcttaaaactcgaagagagctgtttaatgggaagtgatcatgtttttttggaatataattctccaagtcaaacaatgttcgtaaggat |
30435817 |
T |
|
| Q |
804 |
tcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgccttct |
903 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||||| || ||| |||| |||||| |||||| |||| |
|
|
| T |
30435818 |
tcaacttttttgaaggcaccctcatcgaatgataacaaattttcagagttaaaacttatgtggtgtgtgttttttgtcaaattagtcatgtttgcattct |
30435917 |
T |
|
| Q |
904 |
ccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
|||||||||||||||||| |||| ||| ||| ||||| ||||||||||| |
|
|
| T |
30435918 |
ccaaatacatacattctttccccgttactgattgagcgagatcatggac |
30435966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Original strand, 30748840 - 30749793
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||| || |||||||||||||| ||||||||||||||| |
|
|
| T |
30748840 |
cataccatactcagattcatcatcatccaagtatttcagattattcataccatataatcttagtttttttagagatggtagtttaccaagtaacggaagc |
30748939 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| | |||| | ||||| || |
|
|
| T |
30748940 |
cgcacaattttgttgcaaatctcaagttcaagagaaattaaattactaagaataattatccaacttggtaacgataatccttcatagtaatttattgtca |
30749039 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagtatccccatgacaagcataattgatgaag |
307 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| ||||||||||||||||||| || | || | |||| |||||||||||||||||| |||||| |
|
|
| T |
30749040 |
agcatttgagatttgagtgaggttgaagcacttcaagtacttgctcagcactaaccgtagattcctccttgtatacccatgacaagcataattcatgaag |
30749139 |
T |
|
| Q |
308 |
gtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacgt |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30749140 |
gtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatcctttgatactcagttttccaccgaggtttagatcacgt |
30749239 |
T |
|
| Q |
408 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
30749240 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacatgagagacaaag |
30749339 |
T |
|
| Q |
508 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
607 |
Q |
| |
|
| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
30749340 |
atttacatctgtcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttacgacagcgttttattttcaagatttc |
30749439 |
T |
|
| Q |
608 |
cagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatacc |
707 |
Q |
| |
|
||| |||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
30749440 |
cagtttttgtaagttgtaaattgagttaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggcatc |
30749539 |
T |
|
| Q |
708 |
tg------ggatatgcataaaacccgaagagaacggtttaatggcaagtgatca---tcttctattgagatatatttattcaagttaaccaatgttcgca |
798 |
Q |
| |
|
|| |||| ||| |||||||||||||||| ||||| ||| |||| |||| | |||| |||| | | || ||| | || | ||||||||| |
|
|
| T |
30749540 |
tggataaaggatgtgcgtaaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgacaaaatactacacaactcaaaccatgttcgca |
30749639 |
T |
|
| Q |
799 |
aggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgc |
898 |
Q |
| |
|
||||||||||| ||||||| | | | | ||||| |||||| | | || ||| ||||| || |||||||||||| | |||||||||||||||||||| |
|
|
| T |
30749640 |
aggattcaactattttgaaagcatccttgtcgaaggataacgagtcgttattgtcaaaactaatatggtgtgtgcttttcgacaaactagtcaagtttgc |
30749739 |
T |
|
| Q |
899 |
cttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
30749740 |
attctccaaatacatacattcttgccccattactgattgagcaagatcatggac |
30749793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 11 - 951
Target Start/End: Original strand, 30482604 - 30483554
Alignment:
| Q |
11 |
accatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagccgc |
110 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
30482604 |
accatcctgagattcatcatcatccaagtatttcagattatccatataagataattccagtttttttagagatggtagtttaccaagtaacggaagccgc |
30482703 |
T |
|
| Q |
111 |
acaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatccaagc |
210 |
Q |
| |
|
|||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || | || | | ||||| ||||| |
|
|
| T |
30482704 |
acaattttgttgcaattccgaagttcaagagaaattaaattactaagaaggcttatccaacttggtaacgataacccttcattgtaatttattgtcaagc |
30482803 |
T |
|
| Q |
211 |
acttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagtatccccatgacaagcataattgatgaaggtc |
310 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||||||||||||||||| | | || | | || ||||||||||||||||| ||||||||| |
|
|
| T |
30482804 |
atttgagatttgagtgaggttgaagctcttcaagtacttgctcagcactaattatagattcctgttgggatatccatgacaagcataattcatgaaggtc |
30482903 |
T |
|
| Q |
311 |
ttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacgtaac |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
30482904 |
ttttttacccatcaaattagccgcttcagcttcagataacctgccaacattgtttaatccttggatatgcagttttccaccgaggtttagatcacgtaac |
30483003 |
T |
|
| Q |
411 |
tctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaagacc |
510 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |
|
|
| T |
30483004 |
tctgtcaagctattccctttctctacactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacatttgagacaaagacc |
30483103 |
T |
|
| Q |
511 |
gacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttccag |
610 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30483104 |
gacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttgggagacaactcagattacgacagtcttttattttcaagatttccag |
30483203 |
T |
|
| Q |
611 |
cttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatacctgg |
710 |
Q |
| |
|
|||| || |||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| || || | | | |
|
|
| T |
30483204 |
tttttgtaagttgtaaattgagttaggcaacttttctatgtcaagataaataagttccaaataccttaaatgaattaaactccatattgggatctgcaga |
30483303 |
T |
|
| Q |
711 |
g---atatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagat------atatttattcaagttaaccaatgttcgcaagg |
801 |
Q |
| |
|
| || | | |||||| || ||||||| | ||||||| |||||||||| || | ||| || |||||| ||||||| || |||||||||||||| |
|
|
| T |
30483304 |
gaaaatgttcttaaaacacggagagaactgcttaatgggaagtgatcatattttgttgtaataaaataatatttcttcaagtcaaacaatgttcgcaagg |
30483403 |
T |
|
| Q |
802 |
attcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgcctt |
901 |
Q |
| |
|
|||||||||||||||| | | |||||||| ||||| || || ||| || |||| ||||||||||||||| |||||||| ||||| |||| || |
|
|
| T |
30483404 |
attcaacttttttgaaagcattttcatcgaaggataaaaatttcttgctgttaaaaccaatgtggtgtgtgctttttgacaaattagtcgtgtttttatt |
30483503 |
T |
|
| Q |
902 |
ctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||| || |||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
30483504 |
ctccaaacacgtacattcttgccccattactgattgagcgagatcatggac |
30483554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Complemental strand, 30714340 - 30713381
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
30714340 |
cataccatcctcagattcatcatcatccaagtatttcagattattgataccatataatctcagtttttttagagatggtagtttaccaagtaacggaagc |
30714241 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||||| |||||| |||||||| | |||| | ||||| || |
|
|
| T |
30714240 |
cgcacaattttcttgcaatggagaagtacaagagaaactaaattactaagaataattatccaacttggtaatgataatccttcatagtaatttattgtca |
30714141 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg------------tagtatccccatgacaagca |
295 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| | || | |||||||||| | |
|
|
| T |
30714140 |
agcatttgagatttgagtgaggttgaagctcttcgagtacttgctcagcactaacaacaggggtctttggaattccttgtttgtctttccatgacaagta |
30714041 |
T |
|
| Q |
296 |
taattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgagg |
395 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30714040 |
taattcatgaaggtcttttttacccatcaaattagccgcttcagcttcaaataaactgccaacattgtttaatcctttgatactcagttttccaccgagg |
30713941 |
T |
|
| Q |
396 |
tttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaaca |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
30713940 |
tttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaaca |
30713841 |
T |
|
| Q |
496 |
tgagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttat |
595 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||| || || |||| || ||| ||||| |||||| |
|
|
| T |
30713840 |
ttcgagacaaagatcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaaggcaactaagtttattacagtgttttat |
30713741 |
T |
|
| Q |
596 |
tttcaagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccct |
695 |
Q |
| |
|
||||||||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
30713740 |
tttcaagatttccagtttttgtaagttgtaaattgagtcaggcaacttttttatgccaagagaatgaatttccaaataccttaaatgaattaaactccat |
30713641 |
T |
|
| Q |
696 |
agtgata---atacctgggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatg |
792 |
Q |
| |
|
| || | || |||| ||| |||||| |||||||| | ||||||||| |||||||||| || | ||| ||||| || | ||||| || ||||| |
|
|
| T |
30713640 |
actgggacctgtagaaaggatgtgcttaaaactcgaagagagctgtttaatgggaagtgatcatgtttttttgcaatataattctccaagtcaaacaatg |
30713541 |
T |
|
| Q |
793 |
ttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaa |
892 |
Q |
| |
|
|||| |||||||||||||||||||||| ||| ||||||||||||||||| |||| |||| |||||||||||||||||| || ||| |||| |||||| |
|
|
| T |
30713540 |
ttcgtaaggattcaacttttttgaaggcaccctcatcgaatgataacaatttttcagagtgaaaacttatgtggtgtgtgttttttgtcaaattagtcat |
30713441 |
T |
|
| Q |
893 |
gtttgccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
|||||| ||||||||||||| |||||||| |||| ||| ||| ||||| ||||||||||| |
|
|
| T |
30713440 |
gtttgcattctccaaatacacacattctttccccgttactgattgagcgagatcatggac |
30713381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 8 - 701
Target Start/End: Original strand, 29871383 - 29872076
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
29871383 |
cataccatcctgagattcatcatcatccaagtatttcagattatccatataagataattccagtttttttagagatggtagtttaccaagtaacggaagc |
29871482 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| | |||| | ||||| || |
|
|
| T |
29871483 |
cgcacaatcttgttgcaatcctcaagtttaagagaaattaaattactaagaataattatccaacttggtaacgataatccttcatagtaatttattgtca |
29871582 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagt-atccccatgacaagcataattgatgaa |
306 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | | || ||| | || ||||||||||||||||||||||| |
|
|
| T |
29871583 |
agcatttgagatttgagtgaggttgaagctcttcgagtacttgctcagcactaattatagat-tcctgttgcgatatccatgacaagcataattgatgaa |
29871681 |
T |
|
| Q |
307 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
29871682 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatccttcgatactcagttttccaccgagttttagatcacg |
29871781 |
T |
|
| Q |
407 |
taactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaa |
506 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||| |
|
|
| T |
29871782 |
taactctgtcaaactattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttccaatgttaggaaacatactagacaaa |
29871881 |
T |
|
| Q |
507 |
gaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagattt |
606 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||| || || | || || ||| |||||| ||||||||||||||||| |
|
|
| T |
29871882 |
gatcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaagccagctaagtttatcacagtattttattttcaagattt |
29871981 |
T |
|
| Q |
607 |
ccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgat |
701 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
29871982 |
ccagcttttttagattgtaaattgagtcaggcaacttttttatgtcaagaaaacgaagtcccaaataccttaaatgaattaaactccccagtgat |
29872076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Original strand, 30059554 - 30060519
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| ||||| |
|
|
| T |
30059554 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatataagataattccaggttttttaaagatggtagtataccaagtaactgaagc |
30059653 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||| ||| || ||| || |||||||||||||| |||||||||||||| ||||||||| ||| || |||||||| | |||| | |||| | || |
|
|
| T |
30059654 |
cgcacaactttcttacaacgcttaagtttaagagaaactaaattactaagaataattatccaacttggcaaggataatccctcatagaaacttattttca |
30059753 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg------------tagtatccccatgacaagca |
295 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| |||||||||||| |||||| | ||| |||| | || | |||||||||| | |
|
|
| T |
30059754 |
agcagttgagatttgagtgaggttgaagaacttcaagtacttgctcaacactaacaacagggttctttggaattccttgtttgtctttccatgacaagta |
30059853 |
T |
|
| Q |
296 |
taattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgagg |
395 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
30059854 |
taattcatgaaggtcttttttacccatcaaattagccgcttcagcttcaaataacctgccaacattgtttaatccttggatatgcagttttccaccgagg |
30059953 |
T |
|
| Q |
396 |
tttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaaca |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
30059954 |
tttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaaca |
30060053 |
T |
|
| Q |
496 |
tgagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttat |
595 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
30060054 |
tgagagacaaagaccgacatacttcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttacgacagtcttttat |
30060153 |
T |
|
| Q |
596 |
tttcaagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccct |
695 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30060154 |
tttcaagatttccagtttttgtaagttgtaaattgagtcaggcaacttttttatatcaagagaacgaagttccaaataccttaaatgaattaaactacct |
30060253 |
T |
|
| Q |
696 |
agtgataatacctg------ggatatgcataaaacccgaagagaacggtttaatggcaagtgatca---tcttctattgagatatatttattcaagttaa |
786 |
Q |
| |
|
||| || | | || |||||||||||||||||||||| ||||| ||| |||| |||| | |||| |||| | | || || | || |
|
|
| T |
30060254 |
agtaatggctctcggataaaggttatgcataaaacccgaagagaaaggtttgttgggaagtaatcatgtttttcttttgaaaaagtactacaaaactcaa |
30060353 |
T |
|
| Q |
787 |
ccaatgttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaact |
886 |
Q |
| |
|
| |||||||||||||||||||| ||||||| | | | | ||||| |||||| | | ||| ||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
30060354 |
accatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacgagtctttattgtcaaaactaatgtggtgtgtgctttttgacaaact |
30060453 |
T |
|
| Q |
887 |
agtcaagtttgccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
30060454 |
agtcaagtttgcattctccaaatacatacattcttgccccattactgattgagcaagatcatggac |
30060519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Complemental strand, 30678074 - 30677124
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
30678074 |
cataccatcctcagattcatcatcatccaagtatttcagattattcatacgagataatctcagtctttttagagatggtagtttaccacgtaacggaagc |
30677975 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||| | |||| | ||||| || |
|
|
| T |
30677974 |
cgcacaattttgttgcattcctcaagttcaagagaaattaaattactaagaataattatccaacttggtaacgataatctttcatagtaatttattgtca |
30677875 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagtatccccatgacaagcataattgatgaag |
307 |
Q |
| |
|
|||| ||||||||||||||||||| |||| ||| ||||||||||||||||||| || | || | ||||||||||||||||||||||| |||||| |
|
|
| T |
30677874 |
agcatttgagatttgagtgaggtttaagcacttcaagtacttgctcagcactaaccgtagattcctccttgtatccccatgacaagcataattcatgaag |
30677775 |
T |
|
| Q |
308 |
gtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacgt |
407 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
30677774 |
gtcttttttatccatcaatttagccgcttcagcttcagataaactagcaacattgtttaatcctttgatactcagttttccactgaggtttagatcacgt |
30677675 |
T |
|
| Q |
408 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||| ||||||||| |
|
|
| T |
30677674 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttctaatgttaggaaacatacgagacaaag |
30677575 |
T |
|
| Q |
508 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
607 |
Q |
| |
|
| ||| | ||||||||||||||| |||||||||||||| ||||||||| ||||||| || | || || ||| |||||| |||||||||||||||||| |
|
|
| T |
30677574 |
attcacaatattcaatgactatatgtctaagattttgtaaacaagccaagcgttttggaagccagctaagtttatcacagtgttttattttcaagatttc |
30677475 |
T |
|
| Q |
608 |
cagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatacc |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
30677474 |
cagcttttttaggttgtaaattgagtcaggcaacatatttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggcatc |
30677375 |
T |
|
| Q |
708 |
tg------ggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaagg |
801 |
Q |
| |
|
| |||| |||||||||||||||||||| ||| | ||| ||| ||||| || | || | ||| | | |||| | || |||||||| ||||| |
|
|
| T |
30677374 |
cggataaaggatgtgcataaaacccgaagagaaaggtatgttgggaagaaatcatgtttttttttggaataataactcaactgaaacaatgttctcaagg |
30677275 |
T |
|
| Q |
802 |
attcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgcctt |
901 |
Q |
| |
|
|||||||||||||||| | | | ||| || |||||||| | |||| ||| |||| ||||||||||||||| |||||||||| |||| |||| || |
|
|
| T |
30677274 |
attcaacttttttgaaagcattcttatcaaaggataacaagtctttgaggtcaaaaccaatgtggtgtgtgctttttgacaaactggtcatgtttttttt |
30677175 |
T |
|
| Q |
902 |
ctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||||||||||||||| ||||||||| | | ||||| ||||||||||| |
|
|
| T |
30677174 |
ctccaaatacatacattctggccccattactaattgagcgagatcatggac |
30677124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 8 - 951
Target Start/End: Complemental strand, 30339431 - 30338478
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| | ||| | || |||||||||||||| ||||||||| ||||| |
|
|
| T |
30339431 |
cataccatcctcagattcatcatcatccaagtatttcagattattcatacgatatactctaagattttttagagatggtagtttaccaagtaactgaagc |
30339332 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatcca |
207 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||| | |||| || |
|
|
| T |
30339331 |
agcacaattttgttgcaattccaaagattaagagaaattaaattactaagaaggcttatccaacttggtaacgataatccttcatagaaatttactgtca |
30339232 |
T |
|
| Q |
208 |
agcacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttgtagt-atccccatgacaagcataattgatgaa |
306 |
Q |
| |
|
|| | |||||||||||||||||||||||||||| ||| ||||||||||||||||| | | || ||| | || ||| ||||||||||||||||||| |
|
|
| T |
30339231 |
aggaattgagatttgagtgaggttgaagctcttcgagcacttgctcagcactaattatagat-tcctgttgcgatatccacgacaagcataattgatgaa |
30339133 |
T |
|
| Q |
307 |
ggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
30339132 |
ggtcttttttacccatcaaattagccgcttcagcttcagataacctgccaacattgtttaatccttggatatgcagttttccaccgaggtttagatcacg |
30339033 |
T |
|
| Q |
407 |
taactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaa |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
30339032 |
taactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagataattttccaatgttaggaaacattagagacaaa |
30338933 |
T |
|
| Q |
507 |
gaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagattt |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
30338932 |
gaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttggaagacaactcagtttatcacaacgttttattttcaagattt |
30338833 |
T |
|
| Q |
607 |
ccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatac |
706 |
Q |
| |
|
|||| |||| || |||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| || || | |
|
|
| T |
30338832 |
ccagtttttgtaagttgtaaattgagttaggcaacttttctatgtcaagataagtaagttccaaataccttaaatgaattaaactccatattgggatctg |
30338733 |
T |
|
| Q |
707 |
ctg---ggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctat--tgaga----tatatttattcaagttaaccaatgttcgc |
797 |
Q |
| |
|
| | ||| ||| |||||| || ||||| | | ||||||| ||||||||||||| | | | ||| |||||| |||| || || ||| |||||| |
|
|
| T |
30338732 |
cagagaagatgtgcttaaaacacggagagagctgcttaatgggaagtgatcatctttttttctaagaaaataatatttcttcatgtcaaacaaagttcgc |
30338633 |
T |
|
| Q |
798 |
aaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttg |
897 |
Q |
| |
|
|||||||||||||||||||| | | |||||||| ||||| || || ||| ||| |||| ||||||||||||||| |||||||| ||||| |||| |
|
|
| T |
30338632 |
aaggattcaacttttttgaaagcattttcatcgaaggataaaaagttgttgctgtcaaaaccaatgtggtgtgtgctttttgacaaattagtcgtgtttt |
30338533 |
T |
|
| Q |
898 |
ccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
30338532 |
tattctccaaacacatacattcttgccccattactgattgagcgagatcatggac |
30338478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 11 - 698
Target Start/End: Original strand, 30399265 - 30399964
Alignment:
| Q |
11 |
accatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagccgc |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||| |||| ||| |
|
|
| T |
30399265 |
accatcctgagattcatcatcatccaagtatttcagattatccatatcagataattccagtttttttagagacggtagtttaccaattaactgaagtcgc |
30399364 |
T |
|
| Q |
111 |
acaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatccaagc |
210 |
Q |
| |
|
|||| ||| ||||||| | |||||| |||||||| |||||||||||||| ||||||||| |||||| |||||||||| |||| | ||||| | ||||| |
|
|
| T |
30399365 |
acaactttcttgcaattcccaagttcaagagaaactaaattactaagaataattatccaacttggtaatgataatccgtcatagtaatttattttcaagc |
30399464 |
T |
|
| Q |
211 |
acttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg---------tagtatc---cccatgacaagcataa |
298 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||| |||| | |||||||||||||||| |
|
|
| T |
30399465 |
acttgagatttgagtgaggttgaagcacttcgagtacttgctgagcactaatagttgggggattggtaaatccatagttgctttcccatgacaagcataa |
30399564 |
T |
|
| Q |
299 |
ttgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggttt |
398 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| || || ||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
30399565 |
ttcatgaaggtcttttttacccatcaaatcagccgcttgagcttgagataaactgccaaaatcttttaagccttcgatacgcagttttccaccgaggttt |
30399664 |
T |
|
| Q |
399 |
agatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatga |
498 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||||||||||| |
|
|
| T |
30399665 |
agatcacgtaactctgacaagctattccctttctctaaactaacaatgtacacacttaatgtttttagactagttaattttccaatgttaggaaacattc |
30399764 |
T |
|
| Q |
499 |
gagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttatttt |
598 |
Q |
| |
|
|||||||||| ||| | |||||| |||||||| ||||||||||||||| |||||||| ||||||||||| || |||| | |||||| | ||||||||| |
|
|
| T |
30399765 |
gagacaaagatatacaatattcaataactatatgtctaagattttgtaagaaagccaagcgttttgggagacaaatcagttcaccacaatgttttatttt |
30399864 |
T |
|
| Q |
599 |
caagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagt |
698 |
Q |
| |
|
|||| ||||||| |||| || ||||||||||||||||||||||| || |||||||||| || |||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
30399865 |
caaggtttccagtttttgtaagttgtaaattgagtcaggcaactcttgtatgtcaagataaagaagctccaaataccttaaatgaattaaactacctagt |
30399964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 306 - 951
Target Start/End: Original strand, 30206020 - 30206672
Alignment:
| Q |
306 |
aggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcac |
405 |
Q |
| |
|
||||||||||||||||||||||| || |||| ||||||||||||||| | ||||| ||||| |||||||||||||||||||| || ||||||||||| |
|
|
| T |
30206020 |
aggtcttttttacccatcaaattggctgcttgagcttcagataaactacaaacatcatttaaacctttgatacttagttttcctcccaggtttagatcgt |
30206119 |
T |
|
| Q |
406 |
gtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaa |
505 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| || |||| |
|
|
| T |
30206120 |
gtaactctgccaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggttaattttccaatgtatggaaacatgtgaaacaa |
30206219 |
T |
|
| Q |
506 |
agaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatt |
605 |
Q |
| |
|
|| | || |||| |||||| | ||| || ||||| ||||| ||||||||| ||| || ||| | || || || ||| |||||||||||||||||| |
|
|
| T |
30206220 |
tgaatggcaatctttaatgacaagatgtctgagattctgtaaacaagccaagcctttcggaagacagctaagtttttgacaatcttttattttcaagatt |
30206319 |
T |
|
| Q |
606 |
tccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataata |
705 |
Q |
| |
|
||||| |||| || ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
30206320 |
tccagtttttgtaagttgtaaattgagtccggcaacatttttatttcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggta |
30206419 |
T |
|
| Q |
706 |
cctg------ggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaa |
799 |
Q |
| |
|
|||| |||| |||||||||||||||| ||||||||| |||| ||| ||||| || | || | | || | |||||| | || |||||||| ||| |
|
|
| T |
30206420 |
cctggataaaggatgtgcataaaacccgaagggaacggtttgttggcgagtaatcatgttttgttttggtgtaatgattcaactgaaacaatgttctcaa |
30206519 |
T |
|
| Q |
800 |
ggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgcc |
899 |
Q |
| |
|
|||||||||||| |||||| ||| || ||||||||||||| | | ||| ||||||||||||||||||||| |||||||| |||||| ||||| |
|
|
| T |
30206520 |
ggattcaactttcctgaaggcaccctcgtcgaatgataacacgtcatcatagtgaaaacttatgtggtgtgtgctttttgacaaagtagtcatgtttgaa |
30206619 |
T |
|
| Q |
900 |
ttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
30206620 |
ttctccaaatacatacattcttgacccattactgattgagcaagatcatggac |
30206672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 24 - 921
Target Start/End: Complemental strand, 17419059 - 17418150
Alignment:
| Q |
24 |
tcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagccgcacaattttgttgc |
123 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| | |||||||||||| |||||| ||||||| |||| | ||| |||||||||| || | | |
|
|
| T |
17419059 |
tcatcatcatccaagtatttcagatttttcatgtaagataattccagtaattttagagattgtagtttaccaaatgacgaaagccgcacacagttctcac |
17418960 |
T |
|
| Q |
124 |
aatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatccaagcacttgagatttga |
223 |
Q |
| |
|
||| |||| || | || |||||||||||||| |||||||||| |||||| ||| ||| | |||| | |||| | |||||||||||||||||| |
|
|
| T |
17418959 |
aattactaagtgcaacattaactaaattactaagaatacttatccaacttggtaacaatattccatcatagtaagttattttcaagcacttgagatttga |
17418860 |
T |
|
| Q |
224 |
gtgaggttgaagctctttgagtacttgctcagcactaatagttggggtctt------------gtagtatccccatgacaagcataattgatgaaggtct |
311 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||||||| | | |||||||| || | | ||| ||||||||||||| || |||||| |
|
|
| T |
17418859 |
gtgaggttgaagcacttcaagtagttgctcagcactaacaataggggtctttgtcaattcatcgttgcttttccacgacaagcataattcttggaggtct |
17418760 |
T |
|
| Q |
312 |
tttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtttagatcacgtaact |
411 |
Q |
| |
|
|||||||| ||||| ||||| ||| ||||||||||||| | | ||||| ||||| ||||||||||| | ||||||||||||||||||||||| ||||| |
|
|
| T |
17418759 |
tttttacctatcaacttagcttcttgagcttcagataaattaccaacatcttttaagcctttgatactcaattttccaccgaggtttagatcacctaact |
17418660 |
T |
|
| Q |
412 |
ctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaagaccg |
511 |
Q |
| |
|
|| ||||||||| ||| ||||| ||||||||||||| | ||||||||||||||| ||| || |||||| ||| |||||||| ||||| | | |
|
|
| T |
17418659 |
ctaccaagctattacctctctctgaactaacaatgtataagcttaatgttcttagagaagttaattttccgatgcaaggaaacaacttagacagtaaacc |
17418560 |
T |
|
| Q |
512 |
acattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttccagc |
611 |
Q |
| |
|
| || ||||||| | ||| |||||||||||||||| || |||| |||||| || ||||||| | || | ||||| ||||||||||| || |
|
|
| T |
17418559 |
agcgtcatcaatgataagatgtctaagattttgtaagcgagacaagccttttggtggacaactcag---tcgactatgttttacattcaagatttctagt |
17418463 |
T |
|
| Q |
612 |
ttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatacctg-- |
709 |
Q |
| |
|
|||| || |||| ||||| |||| || || | ||||||| | |||||||||||| ||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
17418462 |
ttttgtaagttgcaaattcagtccggtaaaatgtttatgtaagcagaacgaagttctaaataccataaatgaattaaactctctagtgagggtacctgga |
17418363 |
T |
|
| Q |
710 |
----ggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaaggattc |
805 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| ||||||||| |||| || ||| | | | || || | || |||||||||||||||||| |
|
|
| T |
17418362 |
gagaggatgtgcataaaacccgaagagaatggtttcttggcaagtggtcatgtt---ttggtctgttatgatctaactgaaacaatgttcgcaaggattc |
17418266 |
T |
|
| Q |
806 |
aacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgccttctcc |
905 |
Q |
| |
|
|||||||||||||| | | |||| || ||||| | | | | |||| |||| |||||||||||||||| |||||||| || ||| |||||| ||||| |
|
|
| T |
17418265 |
aacttttttgaaggcatcctcattgagtgatagcgagtcatcagagtgaaaacatatgtggtgtgtgctttttgacaaaataatcatgtttgcattctct |
17418166 |
T |
|
| Q |
906 |
aaatacatacattctt |
921 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
17418165 |
aaatacatacattctt |
17418150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 790 - 951
Target Start/End: Original strand, 30400062 - 30400224
Alignment:
| Q |
790 |
atgttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagt |
889 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30400062 |
atgttcgcaaggattcaacttttctgaaggcaccctcatcgaatgataacaaattatcagagttaaaacttatgtggtgtgtgctttttgacaaactagt |
30400161 |
T |
|
| Q |
890 |
caagtttgccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
|| |||||| ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||| |
|
|
| T |
30400162 |
catgtttgcattctccaaatatatacattcttgccccattactgacttagcgagatcatggac |
30400224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 788 - 941
Target Start/End: Complemental strand, 30331251 - 30331098
Alignment:
| Q |
788 |
caatgttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaacta |
887 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||| ||||||||||| || |||||| ||| ||||||| |
|
|
| T |
30331251 |
caatgttcgcaaggattcaacttttttgaaggcaccgtcatcgattgataacaaattattggagtcaaaacttatgtgatgggtgctttttgtcaaacta |
30331152 |
T |
|
| Q |
888 |
gtcaagtttgccttctccaaatacatacattcttgccccattattgactgagca |
941 |
Q |
| |
|
|||| |||||| ||||||| ||||||| ||| |||| ||| |||||| |||||| |
|
|
| T |
30331151 |
gtcatgtttgcattctccagatacatatattgttgctccagtattgattgagca |
30331098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 4380855 - 4381003
Alignment:
| Q |
8 |
cataccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagc |
107 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||| ||||||| |||||| |||||| |||||||| |
|
|
| T |
4380855 |
cataccatcctcaaattcatcatcatccaagtatttcagattatccgtacgaaataattccaatttttttagagatgttagtttaccaagtgacggaagc |
4380954 |
T |
|
| Q |
108 |
cgcacaattttgttgcaatcctcaagtttaagagaaattaaattactaa |
156 |
Q |
| |
|
||||||| |||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
4380955 |
cgcacaactttgttgcaaacacaaagtttaagagaaattaaattactaa |
4381003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 861 - 951
Target Start/End: Original strand, 29872233 - 29872324
Alignment:
| Q |
861 |
atgtggtgtgtgcttcttgacaaactagtcaagtttgccttctccaaatacatacattcttgccccattattgactgagc-agatcatggac |
951 |
Q |
| |
|
||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
29872233 |
atgtggtgtgtgctttttgacaaactggtcatgtttttgttctccaaatgcatacattcttgccccattattgattgagcgagatcatggac |
29872324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 4381005 - 4381060
Alignment:
| Q |
220 |
ttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg |
275 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| ||||||||||||| |||| |
|
|
| T |
4381005 |
ttgagtgaggttgaagctcttcgaatacttgctcagatctaatagttgggggcttg |
4381060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 30474773 - 30474834
Alignment:
| Q |
212 |
cttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtct |
273 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| || ||||||| |||| |
|
|
| T |
30474773 |
cttgagatttgagtgaggttgaagcatttcaagtacttgctcagcagtagtagttggtgtct |
30474834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 30205914 - 30205976
Alignment:
| Q |
212 |
cttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtctt |
274 |
Q |
| |
|
||||||||||||||||||||||||| ||| | || ||||||| ||||||||| |||||||| |
|
|
| T |
30205914 |
cttgagatttgagtgaggttgaagcacttcaaatagttgctcaaaactaatagtaggggtctt |
30205976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 17982400 - 17982477
Alignment:
| Q |
284 |
ccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacatt |
361 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| || ||||| || ||||| ||||||||||||| || ||||| |
|
|
| T |
17982400 |
ccatgacaggcataattcattgaggtcttttttacctataaaatttgcttcttcaacttcagataaactactgacatt |
17982477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 495
Target Start/End: Complemental strand, 30522158 - 30522041
Alignment:
| Q |
378 |
cttagttttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatattt |
477 |
Q |
| |
|
||||||||||| || || ||||||||| |||| |||| |||||| | || ||||||||| ||||||| ||||||||||||||| |||||| || |
|
|
| T |
30522158 |
cttagttttccccctagctttagatcatgtaattctgccaagctgtatccaatctctaaacggacaatgtgtttacttaatgttcttagggaagataatt |
30522059 |
T |
|
| Q |
478 |
ttccaatgttaggaaaca |
495 |
Q |
| |
|
| ||||||||||| |||| |
|
|
| T |
30522058 |
taccaatgttagggaaca |
30522041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 495
Target Start/End: Complemental strand, 30562498 - 30562381
Alignment:
| Q |
378 |
cttagttttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatattt |
477 |
Q |
| |
|
||||||||||| || || ||||||||| |||| |||| |||||| | || ||||||||| ||||||| ||||||||||||||| |||||| || |
|
|
| T |
30562498 |
cttagttttccccctagctttagatcatgtaattctgccaagctgtatccaatctctaaacggacaatgtgtttacttaatgttcttagggaagataatt |
30562399 |
T |
|
| Q |
478 |
ttccaatgttaggaaaca |
495 |
Q |
| |
|
| ||||||||||| |||| |
|
|
| T |
30562398 |
taccaatgttagggaaca |
30562381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 486; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 12 - 950
Target Start/End: Original strand, 26706533 - 26707484
Alignment:
| Q |
12 |
ccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagccgca |
111 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
26706533 |
ccatcctgagattcatcatcatccaagtatttcagattaaccatagaagataattccagtttttctagagatggtagtttaccaagtaacggaagccgca |
26706632 |
T |
|
| Q |
112 |
caattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatccaagca |
211 |
Q |
| |
|
||| ||| ||||||||| |||||| |||||||| |||||||||||||| |||| ||||| |||||| |||||||||| ||| ||||||| |||||||| |
|
|
| T |
26706633 |
caaatttcttgcaatccccaagttcaagagaaactaaattactaagaatacttacccaacttggtaatgataatccgtcgtagtactttatttccaagca |
26706732 |
T |
|
| Q |
212 |
cttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg------------tagtatccccatgacaagcataat |
299 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| | |||| | || | ||||||||||||||||| |
|
|
| T |
26706733 |
cttgagatttgagtgaggttgaagcactttgagtagctgctcaacactaatagttggtggcttggtaaatccatcattgttttcccatgacaagcataat |
26706832 |
T |
|
| Q |
300 |
tgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggttta |
399 |
Q |
| |
|
| | |||| |||||| ||||||||||| || ||| ||||||||||||||||| ||||| ||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
26706833 |
ttttcgaggttttttttccccatcaaattggcttcttgagcttcagataaactgccaacatcttttaagccttcgatactcagttttccaccgaggttta |
26706932 |
T |
|
| Q |
400 |
gatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgag |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| | |
|
|
| T |
26706933 |
gatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggataattttccaatgctaggaaacattcg |
26707032 |
T |
|
| Q |
500 |
agacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttc |
599 |
Q |
| |
|
||||||||| | |||| |||||||||||||||| |||||||||||||| |||| ||||||||| || ||| ||||||||||| |||| |||||||||||| |
|
|
| T |
26707033 |
agacaaagatccacatccttcaatgactatatgtctaagattttgtaaacaagtcaagtgtttaggaagacaactcagattatcacaatcttttattttc |
26707132 |
T |
|
| Q |
600 |
aagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtg |
699 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26707133 |
aagatttccagtttttttaagttgtaaattgagttaggaaacttttttatatcaagataacgaagttccaaataccttaaatgaattaagctccctagtg |
26707232 |
T |
|
| Q |
700 |
ataatacctgggatatgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaa |
799 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| | | ||| | ||| || ||||||| || |||||||||||| |
|
|
| T |
26707233 |
ataatacctgggatgtgcataaaacccgaagagagcggtttaatgggaagtgatcatggttttttggggaataattcttcaagtcaaacaatgttcgcaa |
26707332 |
T |
|
| Q |
800 |
ggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaactagtcaagtttgcc |
899 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| ||| | | ||||| ||||||||||||||||||||| ||| ||||||| ||| |||||| |
|
|
| T |
26707333 |
ggattcaacttttttgaagataccctcatcgaatgataaaaaagtatcggagttaaaacttatgtggtgtgtgctttttgtcaaactactcatgtttgca |
26707432 |
T |
|
| Q |
900 |
ttctccaaatacatacattcttgccccattattgactgagc-agatcatgga |
950 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||| ||||| |||||||||| |
|
|
| T |
26707433 |
ttctccaaatacatgcattcttgtcccattactgattgagcgagatcatgga |
26707484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 10 - 701
Target Start/End: Complemental strand, 20297507 - 20296804
Alignment:
| Q |
10 |
taccatcctcagattcatcatcatccaagtatttcagattatccatatcagataattccagnnnnnnnagagatggtagttttccaagtaacggaagccg |
109 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||| |||||| | ||| |||||||||||||| |||| |||||||||| | |
|
|
| T |
20297507 |
taccatcccgagattcatcatcatccaagtatttcagattatacataccagatattgtcagtttttttagagatggtagtttaccaattaacggaagctg |
20297408 |
T |
|
| Q |
110 |
cacaattttgttgcaatcctcaagtttaagagaaattaaattactaagaaggcttatccaacatggtaaagataatccgtgatagcactttatatccaag |
209 |
Q |
| |
|
|||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||||||| |||||| | ||||| | |||||| ||||| |||||| |
|
|
| T |
20297407 |
cacaatttcgttgcaattctcaagttcaaaagaaactaaattactaagaataattatccaacttggtaaccacaatccatcatagcaatttatttccaag |
20297308 |
T |
|
| Q |
210 |
cacttgagatttgagtgaggttgaagctctttgagtacttgctcagcactaatagttggggtcttg-tag---tatc--------cccatgacaagcata |
297 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| |||||||| ||||||||| | |||||| | |||| || |||| |||| |||||||||| |
|
|
| T |
20297307 |
cacttgagatttgactgaggttgaagcacttcgagtactttctcagcacttacagttggtggcttggtaaatttatcattgctttcccaagacaagcata |
20297208 |
T |
|
| Q |
298 |
attgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagttttccaccgaggtt |
397 |
Q |
| |
|
||| ||||||||||||||||||||||||||| || ||| ||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||| || || |
|
|
| T |
20297207 |
attcatgaaggtcttttttacccatcaaattggcttcttgagcttcagatatactgccaacatcttttaagcctttgatactcagttttccaccaagttt |
20297108 |
T |
|
| Q |
398 |
tagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatg |
497 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
20297107 |
tagatcacgtaactctgtcaagctattccctttctttaaactaacaatgtacacacttaatgttcttagacaagataattttccaatgctaggaaacatt |
20297008 |
T |
|
| Q |
498 |
agagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattt |
597 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| || ||| ||||||||||| ||||| | |||||| |
|
|
| T |
20297007 |
cgagacaaagaccaacaatcttcaatgactatatgtctaagattttgtaggcaggccaagtgtttcggaagacaactcagattatcacagcgtattattt |
20296908 |
T |
|
| Q |
598 |
tcaagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctag |
697 |
Q |
| |
|
||||| |||||| |||| | ||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
20296907 |
tcaaggtttccaatttttgcaagttgtaaattgagtcaggcaactcttttatgacaagattacgaagctccaaataccttaaatgaattaaactctctag |
20296808 |
T |
|
| Q |
698 |
tgat |
701 |
Q |
| |
|
|||| |
|
|
| T |
20296807 |
tgat |
20296804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 788 - 927
Target Start/End: Complemental strand, 20296702 - 20296563
Alignment:
| Q |
788 |
caatgttcgcaaggattcaacttttttgaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtgtgtgcttcttgacaaacta |
887 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||| | | || |||||||| | | || |||| |||| |||||||||||||||| ||||||| || |
|
|
| T |
20296702 |
caatgttcgcaaggattcaacttctttgaaggcacccttgttgatggataacaagtctgtgtagtcaaaaccaatgtggtgtgtgcttcgtgacaaatta |
20296603 |
T |
|
| Q |
888 |
gtcaagtttgccttctccaaatacatacattcttgcccca |
927 |
Q |
| |
|
|| | |||| | |||||||||||||||||||| ||||| |
|
|
| T |
20296602 |
gtaacgtttttatcctccaaatacatacattctttcccca |
20296563 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 496
Target Start/End: Original strand, 52351439 - 52351651
Alignment:
| Q |
284 |
ccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagt |
383 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||||||||||||| ||| || | | |||||||| ||||||||||| | || |||| || || ||| |
|
|
| T |
52351439 |
ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagt |
52351538 |
T |
|
| Q |
384 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaa |
483 |
Q |
| |
|
||||| | || ||||||||||||||||||| |||| | | ||| | | | | || || ||||| ||||||| ||||||||| |||||| | |||||| |
|
|
| T |
52351539 |
tttccttctagctttagatcacgtaactctgccaagttgtgccccgtttttgatctgactatgtatacacttactgttcttagggaagataatcttccaa |
52351638 |
T |
|
| Q |
484 |
tgttaggaaacat |
496 |
Q |
| |
|
||| ||| ||||| |
|
|
| T |
52351639 |
tgtaagggaacat |
52351651 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 98; Significance: 9e-48; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 284 - 577
Target Start/End: Original strand, 7098897 - 7099190
Alignment:
| Q |
284 |
ccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagt |
383 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| ||||| || ||| ||||||||||||||| | |||||| | ||| |||||||| || |
|
|
| T |
7098897 |
ccatgacaagcataattcatcgaggtcttttttacccattaaattggcttctttagcttcagataaactaccaacattttgtaagcctttgatctccagc |
7098996 |
T |
|
| Q |
384 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaa |
483 |
Q |
| |
|
||||| || | ||||||||||||||||||| ||||||| |||||||| ||| ||||||| || |||||||| ||||||| ||||||| |||||||| |
|
|
| T |
7098997 |
tttcctcctaaatttagatcacgtaactctgctaagctatgtcctttctcgaaattaacaatataaacacttaaggttcttaagcaagataattttccaa |
7099096 |
T |
|
| Q |
484 |
tgttaggaaacatgagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcag |
577 |
Q |
| |
|
||| |||||||||| ||||||| || ||| ||||||||| || ||| ||||||||||||||||||| |||||||| ||| ||| ||||||| |
|
|
| T |
7099097 |
tgtgaggaaacatgcgagacaatgaattacaaccttcaatgattaaatgtctaagattttgtaagcaagacaagtgttctggaagacaactcag |
7099190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 284 - 691
Target Start/End: Complemental strand, 7582349 - 7581942
Alignment:
| Q |
284 |
ccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgctaacattgtttaatcctttgatacttagt |
383 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||| || || ||| ||||||||||||||| | ||||| ||| ||| |||| || |
|
|
| T |
7582349 |
ccatgacaagcataattcatcgaggtcttttttacccatcaagttggcttcttgagcttcagataaactaccgacatttggtaagcctctgatctccagc |
7582250 |
T |
|
| Q |
384 |
tttccaccgaggtttagatcacgtaactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaa |
483 |
Q |
| |
|
||||| || | |||||||||||||||||| | ||||||| |||||||| || | ||||| || |||||||||||||||| ||||||| |||||||| |
|
|
| T |
7582249 |
tttcctcctaagtttagatcacgtaactccgctaagctatgtcctttctcggaatttacaatataaacacttaatgttcttaagcaagataattttccaa |
7582150 |
T |
|
| Q |
484 |
tgttaggaaacatgagagacaaagaccgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattacc |
583 |
Q |
| |
|
| | |||||||| ||||||| | |||| ||||||||||||| ||| ||||||||||||||||||| |||||||| || ||| ||||||| || |
|
|
| T |
7582149 |
catgacgaaacatgcgagacaacaaatgacaatcttcaatgactaaatgtctaagattttgtaagcaagacaagtgttccggaagacaactcaggttgga |
7582050 |
T |
|
| Q |
584 |
acagtcttttattttcaagatttccagcttttttaggttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatga |
683 |
Q |
| |
|
| | ||||| | ||||||||||| || ||||| || | | ||||||||||| || || ||| |||||||| | |||| || |||||||| |||||| |
|
|
| T |
7582049 |
aaaatctttcaatttcaagattttcaacttttgtaagctataaattgagtcggggaaggtttctatgtcaaaattgtgaagctctaaatacctcaaatga |
7581950 |
T |
|
| Q |
684 |
attaaact |
691 |
Q |
| |
|
|||||||| |
|
|
| T |
7581949 |
attaaact |
7581942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 95; Significance: 6e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 521 - 868
Target Start/End: Complemental strand, 25294262 - 25293909
Alignment:
| Q |
521 |
aatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttccagcttttttagg |
620 |
Q |
| |
|
||||| || ||| ||||||||||||||||||||||| |||||||| ||| |||||| ||| || | | ||||||||| ||||||||||| |||||| | |
|
|
| T |
25294262 |
aatgattagatgtctaagattttgtaagcaagccaaatgttttggaagaccactcagtttatcataatattttatttttaagatttccagtatttttaag |
25294163 |
T |
|
| Q |
621 |
ttgtaaattgagtcaggcaacttttttatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgataatacctg------ggata |
714 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||| || |||| |||| ||| || |||| |
|
|
| T |
25294162 |
ttgtaaattgagtcagacaacatttttatgtcaagagaataaagtgccaaataccttaaatgaattaagcttcctattgatggtacttggataaaggatg |
25294063 |
T |
|
| Q |
715 |
tgcataaaacccgaagagaacggtttaatggcaagtgatcatcttctattgagatatatttattcaagttaaccaatgttcgcaaggattcaactttttt |
814 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||||||| |||| || |||| | || ||| | || | |||||| ||||||||||||||| | |
|
|
| T |
25294062 |
tgcataaaactcgaagacaacggtttgttgagaagtgatcatgttctgtttcagtataatgatccaactgaaaccgtgttcgtaaggattcaacttttat |
25293963 |
T |
|
| Q |
815 |
gaaggaaccatcatcgaatgataacaaatttttggagtctaaacttatgtggtg |
868 |
Q |
| |
|
||||||||| |||||| ||||| ||| | |||||| ||||||||||||||| |
|
|
| T |
25293962 |
gaaggaaccctcatcggttgatagcaagtcactggagtttaaacttatgtggtg |
25293909 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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