View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4716-Insertion-11 (Length: 390)
Name: NF4716-Insertion-11
Description: NF4716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4716-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 8 - 390
Target Start/End: Complemental strand, 21879459 - 21879080
Alignment:
| Q |
8 |
tttttatgccaaggcctttgtgaagaaatagaaagtatccatgtatgactaggagtatatacaccagaataagcaaatgatgagcataccaaaaggaatt |
107 |
Q |
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| T |
21879459 |
tttttatgccaag-cctttgtga-gaaatagaaagtatccatgtatgactaggagtatatacaccagaataagcaaatgatgagcataccaaaaggaatt |
21879362 |
T |
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| Q |
108 |
gaatccggccaaatgatgcaacggcgaaggtaacgtgacaacgctttttctaaagtaatgagttgccaaagtgaaagaaaaagccataatcaagaccatg |
207 |
Q |
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| T |
21879361 |
gaatccggccaaatgatgcaacggcgaaggtaacgtgacaacgctttttctaaagtaatgagttgccaaagtgaaagaaaaagccataatcaagaccatg |
21879262 |
T |
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| Q |
208 |
aaaattccagttataccaggaggacttgtaacaagggtcaagtaactaggctgcttataatcaaaactggatccaagtatcgccataaatttttcggtcg |
307 |
Q |
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| T |
21879261 |
aaaattccagttataccaggaggacttgtaacaagggtcaagtaactaggctgcttataatcaaaaccggatccaagtatcgccataaatttttcggtcg |
21879162 |
T |
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| Q |
308 |
gacaagaaactaatcttggaaaatcacgagatacatgcacacctacatggattaaagttcctataactacgcccaactgcaat |
390 |
Q |
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| T |
21879161 |
gacaagaaactaatcttggaaaatcacaagatacatgcacacctacatggattaaagttcctataactacg-ccaactgcaat |
21879080 |
T |
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