View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4716-Insertion-13 (Length: 305)
Name: NF4716-Insertion-13
Description: NF4716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4716-Insertion-13 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 6 - 305
Target Start/End: Original strand, 13358476 - 13358775
Alignment:
| Q |
6 |
caatacttctctttgaaacttttcaattggcctagtattaaccttttgaggctttgactccatgaagttgctagaagatccctcaactttttcaaccaac |
105 |
Q |
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| T |
13358476 |
caatacttctctttgaaacttttcaattggcctagtattaaccttttgaggctttgactccatgaaattgctagaagatccctcaactttttcaaccaac |
13358575 |
T |
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| Q |
106 |
tttccagaatatagaaactgagaatcttgaagcgatcttgtatcaaaaaatggcgtcgagtagggatcagagaaaccggaaggaggcaaagaatctaatc |
205 |
Q |
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| T |
13358576 |
tttccagaatatagaaactgagaatcttgaagcgatcttgtatcaaaaaatggcgtcgagtagggatcagagaaaccggaaggaggcaaagaatctaatc |
13358675 |
T |
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| Q |
206 |
ccataagccttgcaactacattaggagctcttgttccacagtcatcacttgtaacagatgaagcataactatgatcacaacttcctctaacatattcccc |
305 |
Q |
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| T |
13358676 |
ccataagccttgcaactacattaggagctcttgttccacagtcatcacttgtaacagatgaagcataactatgatcacaacttcctctaacatattcccc |
13358775 |
T |
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