View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4716-Insertion-2 (Length: 820)

Name: NF4716-Insertion-2
Description: NF4716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4716-Insertion-2
NF4716-Insertion-2
[»] chr7 (31 HSPs)
chr7 (8-556)||(49009557-49010105)
chr7 (555-790)||(49010175-49010410)
chr7 (561-726)||(3113676-3113840)
chr7 (561-726)||(5555911-5556075)
chr7 (561-726)||(33686010-33686174)
chr7 (561-726)||(43184024-43184188)
chr7 (561-726)||(8867287-8867451)
chr7 (561-726)||(7003172-7003336)
chr7 (561-726)||(7049043-7049207)
chr7 (561-726)||(40919577-40919741)
chr7 (561-779)||(14776608-14776825)
chr7 (578-726)||(38637938-38638087)
chr7 (563-726)||(11020585-11020747)
chr7 (563-726)||(34388636-34388798)
chr7 (580-726)||(26625210-26625356)
chr7 (560-725)||(20606071-20606235)
chr7 (561-726)||(36631265-36631428)
chr7 (561-725)||(8394574-8394736)
chr7 (559-718)||(13072424-13072582)
chr7 (560-740)||(20609364-20609542)
chr7 (619-726)||(37001796-37001903)
chr7 (560-718)||(20611853-20612010)
chr7 (561-641)||(36658626-36658705)
chr7 (565-655)||(45709965-45710054)
chr7 (560-725)||(23582414-23582578)
chr7 (601-760)||(12224506-12224661)
chr7 (580-657)||(32199152-32199229)
chr7 (668-758)||(36658721-36658810)
chr7 (561-650)||(33387046-33387134)
chr7 (592-658)||(28837412-28837478)
chr7 (710-790)||(8722837-8722917)
[»] chr8 (26 HSPs)
chr8 (561-782)||(9175581-9175800)
chr8 (561-758)||(42231384-42231579)
chr8 (561-758)||(3648317-3648512)
chr8 (561-758)||(9877667-9877862)
chr8 (580-726)||(7278488-7278634)
chr8 (561-726)||(4404455-4404619)
chr8 (561-726)||(34136357-34136521)
chr8 (561-761)||(378871-379068)
chr8 (561-726)||(39914963-39915128)
chr8 (561-726)||(2728749-2728913)
chr8 (561-726)||(16787581-16787745)
chr8 (561-726)||(29727938-29728100)
chr8 (561-726)||(23402555-23402719)
chr8 (561-788)||(19034-19262)
chr8 (561-705)||(40470118-40470261)
chr8 (563-726)||(40401062-40401224)
chr8 (559-778)||(29351807-29352024)
chr8 (560-787)||(32539972-32540185)
chr8 (595-726)||(3435726-3435857)
chr8 (561-644)||(15838734-15838816)
chr8 (584-726)||(32964064-32964206)
chr8 (563-725)||(35852495-35852656)
chr8 (587-653)||(36409020-36409086)
chr8 (580-757)||(15541743-15541919)
chr8 (631-760)||(33639154-33639282)
chr8 (580-629)||(32750385-32750434)
[»] chr4 (42 HSPs)
chr4 (561-726)||(3292452-3292616)
chr4 (561-726)||(6235957-6236121)
chr4 (561-758)||(29995507-29995703)
chr4 (561-726)||(42333330-42333495)
chr4 (561-779)||(28876818-28877034)
chr4 (561-726)||(10352439-10352604)
chr4 (561-726)||(6689791-6689955)
chr4 (561-726)||(43143140-43143304)
chr4 (561-726)||(20129762-20129927)
chr4 (561-726)||(26438832-26438997)
chr4 (561-726)||(34406837-34407002)
chr4 (561-726)||(43356353-43356518)
chr4 (561-726)||(47501222-47501387)
chr4 (561-726)||(30077191-30077356)
chr4 (563-755)||(33135972-33136162)
chr4 (561-726)||(13012637-13012802)
chr4 (561-726)||(25931157-25931321)
chr4 (561-726)||(35546400-35546563)
chr4 (561-726)||(36381902-36382065)
chr4 (561-758)||(48989776-48989971)
chr4 (561-761)||(17510749-17510951)
chr4 (561-755)||(48130425-48130617)
chr4 (562-761)||(29134152-29134349)
chr4 (561-726)||(30216301-30216462)
chr4 (561-758)||(30110410-30110605)
chr4 (561-698)||(40529464-40529600)
chr4 (563-653)||(13394870-13394959)
chr4 (561-726)||(50204643-50204797)
chr4 (562-725)||(26546856-26547017)
chr4 (580-726)||(13502173-13502319)
chr4 (560-725)||(9415345-9415509)
chr4 (561-653)||(1818164-1818256)
chr4 (560-724)||(4038262-4038425)
chr4 (560-650)||(29094594-29094683)
chr4 (560-761)||(56225750-56225950)
chr4 (560-725)||(31853673-31853837)
chr4 (668-726)||(13391003-13391061)
chr4 (608-782)||(49062453-49062626)
chr4 (564-644)||(54933459-54933538)
chr4 (589-644)||(5290915-5290970)
chr4 (679-726)||(40529651-40529698)
chr4 (673-726)||(44157182-44157235)
[»] chr1 (19 HSPs)
chr1 (561-782)||(41971757-41971977)
chr1 (561-758)||(3829430-3829624)
chr1 (563-726)||(35907977-35908139)
chr1 (561-726)||(7433869-7434033)
chr1 (561-758)||(11957874-11958069)
chr1 (561-726)||(17445741-17445905)
chr1 (561-726)||(42310495-42310659)
chr1 (562-726)||(23313443-23313606)
chr1 (561-758)||(32981580-32981775)
chr1 (561-705)||(33490153-33490296)
chr1 (612-706)||(32944405-32944499)
chr1 (562-761)||(28463396-28463582)
chr1 (584-718)||(5715373-5715507)
chr1 (610-685)||(7350228-7350303)
chr1 (631-726)||(42412370-42412464)
chr1 (632-706)||(18716322-18716396)
chr1 (560-623)||(33774629-33774691)
chr1 (584-706)||(17744594-17744716)
chr1 (641-726)||(3604778-3604863)
[»] chr5 (36 HSPs)
chr5 (560-725)||(192353-192517)
chr5 (566-726)||(23034427-23034586)
chr5 (561-726)||(13818426-13818590)
chr5 (561-758)||(15959470-15959665)
chr5 (561-758)||(31501243-31501438)
chr5 (561-726)||(31680814-31680978)
chr5 (561-726)||(33430768-33430932)
chr5 (561-726)||(16333455-16333619)
chr5 (561-726)||(31271854-31272018)
chr5 (563-726)||(26282871-26283034)
chr5 (561-726)||(39657082-39657249)
chr5 (561-706)||(10034351-10034495)
chr5 (561-726)||(12278412-12278576)
chr5 (560-759)||(38268944-38269130)
chr5 (563-726)||(37255054-37255216)
chr5 (561-726)||(36293174-36293339)
chr5 (561-726)||(1775931-1776094)
chr5 (561-726)||(17332175-17332339)
chr5 (561-726)||(36291818-36291982)
chr5 (561-726)||(39435145-39435310)
chr5 (587-726)||(43069329-43069468)
chr5 (560-726)||(27750683-27750846)
chr5 (561-702)||(16155446-16155584)
chr5 (560-630)||(30297604-30297673)
chr5 (560-683)||(11779160-11779282)
chr5 (626-705)||(28801712-28801791)
chr5 (592-666)||(24792894-24792968)
chr5 (580-726)||(18266162-18266312)
chr5 (555-656)||(35338308-35338408)
chr5 (580-660)||(23034271-23034351)
chr5 (643-761)||(30297492-30297606)
chr5 (560-750)||(8788264-8788452)
chr5 (560-658)||(35911354-35911451)
chr5 (584-644)||(20368513-20368573)
chr5 (603-688)||(1050565-1050650)
chr5 (580-617)||(33094370-33094407)
[»] chr3 (27 HSPs)
chr3 (561-758)||(27935624-27935818)
chr3 (561-726)||(40081295-40081459)
chr3 (561-758)||(5135735-5135930)
chr3 (561-726)||(6930449-6930613)
chr3 (561-726)||(19565056-19565221)
chr3 (561-726)||(6268979-6269144)
chr3 (561-726)||(22967997-22968162)
chr3 (561-726)||(45183428-45183591)
chr3 (561-726)||(45336320-45336485)
chr3 (561-726)||(19390595-19390760)
chr3 (565-757)||(29564674-29564868)
chr3 (561-726)||(39772239-39772404)
chr3 (561-726)||(6503125-6503289)
chr3 (561-726)||(33041400-33041561)
chr3 (561-726)||(34083675-34083838)
chr3 (679-789)||(8257407-8257517)
chr3 (592-726)||(11017825-11017959)
chr3 (580-726)||(27912469-27912615)
chr3 (580-699)||(35937687-35937806)
chr3 (555-635)||(38282857-38282936)
chr3 (561-644)||(8257275-8257357)
chr3 (631-706)||(7468824-7468899)
chr3 (704-766)||(3159327-3159388)
chr3 (560-642)||(19814766-19814847)
chr3 (555-617)||(38415473-38415534)
chr3 (580-697)||(219189-219306)
chr3 (580-718)||(10842155-10842293)
[»] chr2 (27 HSPs)
chr2 (561-726)||(31581175-31581339)
chr2 (561-726)||(45419030-45419194)
chr2 (563-764)||(7072053-7072252)
chr2 (561-726)||(12756393-12756557)
chr2 (561-726)||(18982038-18982202)
chr2 (561-726)||(35963139-35963303)
chr2 (561-726)||(6403357-6403522)
chr2 (561-726)||(17444594-17444759)
chr2 (561-726)||(41251187-41251352)
chr2 (561-726)||(2957700-2957864)
chr2 (563-727)||(32126742-32126905)
chr2 (563-758)||(4554718-4554910)
chr2 (561-726)||(2286237-2286400)
chr2 (561-758)||(26162227-26162422)
chr2 (560-725)||(37621618-37621782)
chr2 (580-705)||(26238406-26238531)
chr2 (601-758)||(45121695-45121851)
chr2 (567-761)||(26591496-26591687)
chr2 (561-726)||(42442433-42442597)
chr2 (561-698)||(44084185-44084321)
chr2 (566-777)||(18829309-18829518)
chr2 (561-678)||(21556543-21556659)
chr2 (561-726)||(816613-816777)
chr2 (561-725)||(17373394-17373558)
chr2 (561-755)||(8058871-8059052)
chr2 (559-704)||(25391425-25391568)
chr2 (561-634)||(15441832-15441904)
[»] chr6 (14 HSPs)
chr6 (563-726)||(34948337-34948499)
chr6 (561-726)||(28997177-28997341)
chr6 (561-726)||(33228891-33229056)
chr6 (561-726)||(399066-399231)
chr6 (561-726)||(29743731-29743896)
chr6 (555-778)||(28931450-28931671)
chr6 (561-758)||(13838245-13838443)
chr6 (560-725)||(10231747-10231911)
chr6 (638-758)||(23217452-23217570)
chr6 (555-718)||(31373247-31373409)
chr6 (561-613)||(18339541-18339592)
chr6 (560-715)||(12098436-12098590)
chr6 (560-715)||(12849947-12850101)
chr6 (584-650)||(4335252-4335318)
[»] scaffold0002 (1 HSPs)
scaffold0002 (561-726)||(480010-480175)
[»] scaffold0041 (1 HSPs)
scaffold0041 (561-726)||(53354-53518)
[»] scaffold0134 (1 HSPs)
scaffold0134 (560-726)||(17754-17918)
[»] scaffold0069 (1 HSPs)
scaffold0069 (580-726)||(18025-18172)
[»] scaffold0495 (1 HSPs)
scaffold0495 (560-725)||(8467-8631)
[»] scaffold0166 (1 HSPs)
scaffold0166 (592-666)||(35277-35351)
[»] scaffold0831 (1 HSPs)
scaffold0831 (620-760)||(3383-3521)


Alignment Details
Target: chr7 (Bit Score: 529; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 8 - 556
Target Start/End: Original strand, 49009557 - 49010105
Alignment:
Q  8 cttctctacatatacagaaatagatgtcccttgttaaacatatgcaattttgcctcctgcttctggggctctaaggaacaataagagaactcttgaaagc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49009557 cttctctacatatacagaaatagatgtcccttgttaaacatattcaattttgcctcctgcttctagggctctaaggaacaataagagaactcttgaaagc 49009656  T
Q  108 gtgtaaaaacaaaggaggccaacaaataaggttgattcaaataaccaaaaacatttttaaagatgaacaaatttgattcaaaatgcttccaataaataga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009657 gtgtaaaaacaaaggaggccaacaaataaggttgattcaaataaccaaaaacatttttaaagatgaacaaatttgattcaaaatgcttccaataaataga 49009756  T
Q  208 gtcattttgagtagaattaggaaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009757 gtcattttgagtagaattaggaaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattg 49009856  T
Q  308 caaatgaaatccaaaacaacaacatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattgattgtcttcagagaaatat 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49009857 caaatgaaatccaaaacaacaacatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattaattgtcttcagagaaatat 49009956  T
Q  408 gatgctatactatactatgtacaatattgttttattgtaagatgtgaatgtttgcaaaaagaaatttctagagaccaagattttttattcgctgctttaa 507  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009957 gatgctatactatactatgtacaatattgttttattgtaagatatgaatgtttgcaaaaagaaatttctagagaccaagattttttattcgctgctttaa 49010056  T
Q  508 tcaatgataggcgaggttgaattatttgttttctagacatgtttaagat 556  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49010057 tcaatgataggcgaggttgaattatttattttctagacatgtttaagat 49010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 555 - 790
Target Start/End: Original strand, 49010175 - 49010410
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaa 654  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49010175 attttccataattatgaatttcttaaa-caatttataattaatttgtctctcgtttaaaaattgcaaaacttcattgtgaagattcttattatgttctaa 49010273  T
Q  655 ccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaata 754  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  49010274 ccatgcttataaaattagggaacgaaatttgacctgtgagtatacgcttattaggaacaaaatttcaatttttgcacgtttttgtttaaaaataaaaata 49010373  T
Q  755 aattgaatcgtcattgaagtgctat-aaactttgcaa 790  Q
    ||| |||||||||||||| |||||| |||||||||||    
T  49010374 aatagaatcgtcattgaaatgctataaaactttgcaa 49010410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 3113840 - 3113676
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| | ||||||||  |||||    
T  3113840 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgc 3113742  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  3113741 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 3113676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 5555911 - 5556075
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| | ||||||||  |||||    
T  5555911 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgc 5556009  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  5556010 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 5556075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 33686010 - 33686174
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||| ||||||||  |||||    
T  33686010 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactacaaaattttattgtgaagattcttatcatgttctagtcatgc 33686108  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || | |||||||| |||||||||  ||||||||||||||||  |||||||||||| ||||||    
T  33686109 ctacaaaagtagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattttaatttt 33686174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 43184188 - 43184024
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  43184188 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 43184090  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  43184089 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 43184024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 8867451 - 8867287
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  8867451 cataattatgaatttcttaaa-caatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 8867353  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  8867352 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 8867287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 7003172 - 7003336
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| | ||||||||| ||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  7003172 cataattatgaatttcttaaa-caatttataattaatttgtatatcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 7003270  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| ||| |||||  || |||||||||||||  |||||||||||||||||||    
T  7003271 ctacaaaattagggaactaaacttgacttgttagtatacgcttacacggaacaaaatttcaatttt 7003336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 7049043 - 7049207
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| | ||||||||| ||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  7049043 cataattatgaatttcttaaa-caatttataattaatttgtatatcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 7049141  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| ||| |||||  || |||||||||||||  |||||||||||||||||||    
T  7049142 ctacaaaattagggaactaaacttgacttgttagtatacgcttacacggaacaaaatttcaatttt 7049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 40919741 - 40919577
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  |||||    
T  40919741 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgc 40919643  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  40919642 ctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaatttt 40919577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 561 - 779
Target Start/End: Complemental strand, 14776825 - 14776608
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| || |||||  ||||    
T  14776825 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatattctagtcatg 14776727  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattg 759  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||  |||  ||||| ||||||||||     
T  14776726 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgtttcagttgaaaaattaaaataaattt 14776628  T
Q  760 aatcgtcattgaagtgctat 779  Q
    || || | ||||| ||||||    
T  14776627 aaacgactttgaaatgctat 14776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 578 - 726
Target Start/End: Complemental strand, 38638087 - 38637938
Alignment:
Q  578 taaaacaattt-ataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaa 676  Q
    ||||||||||| ||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||    
T  38638087 taaaacaattttataattaatttgtatctcgtttaaagactacaaaaattcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 38637988  T
Q  677 cgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  38637987 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 38637938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 563 - 726
Target Start/End: Complemental strand, 11020747 - 11020585
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    ||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||| ||  ||||  ||||| |    
T  11020747 taattataaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactccaaaatttcgttgtgaaggttcttatcattgtctagtcatgcct 11020649  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | ||||||||||||| |||||||||   ||| |||||||||||  |||||||||||||||||||    
T  11020648 acaagattagggaactaaatttgacttatgattatacgcttacgcggaacaaaatttcaatttt 11020585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 563 - 726
Target Start/End: Complemental strand, 34388798 - 34388636
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| |||||| |  ||||| |    
T  34388798 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttccagtcatgcct 34388700  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || |||||||||| |||||||||  |||| |||| ||||||  |||||||||||||||||||    
T  34388699 acaaaattagggaactaaatttgacttgtgaatatatgcttacgcggaacaaaatttcaatttt 34388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 580 - 726
Target Start/End: Original strand, 26625210 - 26625356
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||||||||||||||||| |||| |||||| ||| ||||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |    
T  26625210 aaacaatttataattaatttgtatctcatttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaacta 26625309  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||||| ||  ||||||||||||||||  |||||||||||||||||||    
T  26625310 aatttaacttgtgagtatacgcttacgcggaacaaaatttcaatttt 26625356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 20606071 - 20606235
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||| |||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||    
T  20606071 ccataattatgaatttcttaaa-caattcataattaatttgtatctcatttaaaaacttcaaaatttcatggtgaaggttcttatcatgttctaaccatg 20606169  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || |  ||||   |||||||||||| | || |||||| ||||||| ||||||||||| ||||||    
T  20606170 cctacagaattatataacgaaatttgatccgtcagtatatgcttactcggaacaaaattgcaattt 20606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 36631265 - 36631428
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||| |||||||| |||| ||||||||||||| | ||||| |||||||||||  ||||||| ||||||||  |||||    
T  36631265 cataattatgaatttcttaaa-caattgataattaaattgtatctcgtttaaaaattacaaaatttcattgtgaaagttcttatcatgttctagtcatgc 36631363  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || ||||| |||| ||||||| |  ||||||||||||||||  |||||||||||||||||||    
T  36631364 ctacaaaattagagaactaaatttg-cttgtgagtatacgcttacgcggaacaaaatttcaatttt 36631428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 561 - 725
Target Start/End: Original strand, 8394574 - 8394736
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | |||| |||||||| | ||||| ||||| |||||| ||||||| ||||||||  |||||    
T  8394574 cataattatgaatttcttaaa-caatttataattaatttatatctcatttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgc 8394672  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
     || || |||||||||| ||||||  |  ||||||||||||||||  ||||||||||||||||||    
T  8394673 ctacaaaattagggaactaaattt-tcttgtgagtatacgcttacgcggaacaaaatttcaattt 8394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 559 - 718
Target Start/End: Complemental strand, 13072582 - 13072424
Alignment:
Q  559 tccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccat 658  Q
    |||||||||||||||| |||||| ||||| |||||||||| || |||||||||||| || ||||| ||||| |||||| ||||||| || |||||| |||    
T  13072582 tccataattatgaatttcttaaa-caattcataattaattagtatctcgtttaaaatctccaaaatttcatggtgaaggttcttatgatattctaaacat 13072484  T
Q  659 gcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 718  Q
     | |  || ||||| |||| |||||||||| |||||||||||||||||  ||||||||||    
T  13072483 acctccaaaattagagaacaaaatttgacccgtgagtatacgcttactctgaacaaaatt 13072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 560 - 740
Target Start/End: Original strand, 20609364 - 20609542
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| | ||| ||||||||||||| |||| ||||||| || ||||| | ||| |||||| |||||||  |||||||||||||    
T  20609364 ccataattatgaatttcttaaa-ctattcataattaatttgtatctcatttaaaatcttcaaaattgcatggtgaaggttcttatcttgttctaaccatg 20609462  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgtt 740  Q
    | || |  ||||   |||| ||||||||| ||||||||||||||| | |||| |||||| | | |||||||| ||||||||    
T  20609463 cctacagaattatataacggaatttgacccgtgagtatacgcttattcggaaaaaaattgcta-ttttgcacgtttttgtt 20609542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 619 - 726
Target Start/End: Complemental strand, 37001903 - 37001796
Alignment:
Q  619 caaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 718  Q
    ||||| |||| ||||||| ||||||| ||||||||  ||||| || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||    
T  37001903 caaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 37001804  T
Q  719 tcaatttt 726  Q
    ||||||||    
T  37001803 tcaatttt 37001796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 560 - 718
Target Start/End: Original strand, 20611853 - 20612010
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| | ||| ||||||||||||| |||| ||||||| || ||||| | ||| |||||| ||||||| |||||||||| |||    
T  20611853 ccataattatgaatttcttaaa-ctattcataattaatttgtatctcatttaaaatcttcaaaattgcatggtgaaggttcttatcatgttctaactatg 20611951  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 718  Q
    | || |  ||||   |||| ||||||||  ||||||||||||||||| |||| ||||||    
T  20611952 cctacagaattatataacggaatttgacgcgtgagtatacgcttactcggaaaaaaatt 20612010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 561 - 641
Target Start/End: Original strand, 36658626 - 36658705
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattct 641  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| || ||||||||| ||||    
T  36658626 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaattttattgtgaaggttct 36658705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 565 - 655
Target Start/End: Original strand, 45709965 - 45710054
Alignment:
Q  565 attatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaac 655  Q
    |||| |||||||||||| ||||||||||||||||  || |||||| |||||||  |||| ||||| |||||||||||||| ||||||||||    
T  45709965 attaagaattacttaaa-caatttataattaattcttccctcgttcaaaaactctaaaatttcatggtgaagattcttataatgttctaac 45710054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 23582414 - 23582578
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    |||||| |||||||| ||| ||| || | ||||||||||  | |||| |||||||||| | ||| ||||  |||||  || |||| ||||||||||||||    
T  23582414 ccataactatgaatttctttaaa-aagtcataattaattcatatctcatttaaaaactaccaaatttcacggtgaatgttattatgatgttctaaccatg 23582512  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || |||||  ||| |||||||||| |||| ||||| |||||| ||||||||||| ||||||    
T  23582513 cctaaaaaattagataacaaaatttgacccgtgattatactcttactcggaacaaaattgcaattt 23582578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 601 - 760
Target Start/End: Complemental strand, 12224661 - 12224506
Alignment:
Q  601 tctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacg 700  Q
    |||||||||||||||||  |||| || || |||||   |||||| ||||||||| ||||| ||||| |||||||| ||| |||||||  ||||||||| |    
T  12224661 tctctcgtttaaaaactctaaaattttatggtgaa---tcttatgatgttctaatcatgcctataaaattagggagcgacatttgacatgtgagtatatg 12224565  T
Q  701 cttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattga 760  Q
     |||||   ||||||||| ||| |||||||| |||| |||  ||||| ||||| ||||||    
T  12224564 attactcataacaaaattgcaa-ttttgcacgttttggttgaaaaatcaaaatcaattga 12224506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 657
Target Start/End: Original strand, 32199152 - 32199229
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaacca 657  Q
    ||||||||| ||||||||||||||||||||||||||||  |||| | ||  |||||||||||||  ||||| ||||||    
T  32199152 aaacaatttttaattaatttgtctctcgtttaaaaactataaaattccacggtgaagattcttacgatgttataacca 32199229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 668 - 758
Target Start/End: Original strand, 36658721 - 36658810
Alignment:
Q  668 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
    |||||||||  |||||| ||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  36658721 attagggaattaaatttcacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 36658810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 33387046 - 33387134
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgtt 650  Q
    |||||||||||||| |||||| ||||| ||||||||||| || |||||| |||||||  |||| ||||| |||||  || ||||||||||    
T  33387046 cataattatgaatttcttaaa-caattcataattaatttatcactcgttcaaaaactcaaaaatttcatggtgaaagttattattatgtt 33387134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 658
Target Start/End: Complemental strand, 28837478 - 28837412
Alignment:
Q  592 attaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccat 658  Q
    |||||||||| ||||||| |||||||  |||| |||||||||||| || |||| || ||||||||||    
T  28837478 attaatttgtttctcgttaaaaaactctaaaatttcattgtgaaggtttttatgatattctaaccat 28837412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 790
Target Start/End: Complemental strand, 8722917 - 8722837
Alignment:
Q  710 aacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaagtgctat-aaactttgcaa 790  Q
    ||||||||||||||||| ||||  ||| |||  |||||||||||||||||||||||  | ||| |||||| |||||||||||    
T  8722917 aacaaaatttcaatttt-gcacggtttggttgaaaaataaaaataaattgaatcgtattcgaaatgctatgaaactttgcaa 8722837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 561 - 782
Target Start/End: Original strand, 9175581 - 9175800
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||  |||    
T  9175581 cataattatgaatttcttaaat-aacttataattaatttgtctctcgtttaaaaactgcaaaacttcatagtgaaggatcttattatgttctaacattgc 9175679  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattga 760  Q
     || || |||||||||| ||||||||||  |||||| | |||||||||||||||||||| || |||||||| |||| |||  |||||||||  |||| ||    
T  9175680 ctacaaaattagggaacaaaatttgacccatgagtaaatgcttactaggaacaaaattttaa-ttttgcacattttagttgaaaaataaaataaaataga 9175778  T
Q  761 atcgtcattgaagtgctataaa 782  Q
    ||| || | ||| |||||||||    
T  9175779 atcatcttcgaaatgctataaa 9175800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 42231384 - 42231579
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| ||||| |||||| ||||||| ||||||||  |||||    
T  42231384 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgc 42231482  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  42231483 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 42231579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 3648512 - 3648317
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  3648512 cataattatgaatttcttaaa-caatttataattaatttttatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 3648414  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  3648413 ctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaa-ttttgcacgttttagttgaaaaatcaaaataaatt 3648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 9877667 - 9877862
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  9877667 cataattatgaatttcttaaa-caattcataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 9877765  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  ||||||||| ||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  9877766 ctacaaaattagggaactaaatttgacttgtgagtatatgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 9877862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 580 - 726
Target Start/End: Original strand, 7278488 - 7278634
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |    
T  7278488 aaacaatttataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaacta 7278587  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||||||||  ||||||||||||||||  |||||||||||||||||||    
T  7278588 aatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 7278634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 4404455 - 4404619
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||| ||| ||||||| ||||||||  |||||    
T  4404455 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtaaaggttcttatcatgttctagtcatgc 4404553  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  4404554 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 4404619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 34136521 - 34136357
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  |||||    
T  34136521 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgc 34136423  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  34136422 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 34136357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 561 - 761
Target Start/End: Original strand, 378871 - 379068
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| || ||||||||| ||||||| ||||||||  |||||    
T  378871 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactacaaaattttattgtgaagtttcttatcatgttctagtcatgc 378969  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattga 760  Q
     |  || |||||||||  ||||||||||  ||||||||| |||||| ||||||||| ||||| ||||||| | ||||| || ||||| ||||||||||||    
T  378970 ctgcaaaattagggaattaaatttgacctatgagtatacacttactcggaacaaaaattcaa-ttttgca-cgttttggttcaaaattaaaataaattga 379067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 39914963 - 39915128
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  39914963 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 39915061  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  39915062 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 39915128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 2728913 - 2728749
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||  |||| |||| ||||||| ||||||| ||||||||  |||||    
T  2728913 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactataaaatttcactgtgaaggttcttatcatgttctagtcatgc 2728815  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     ||||| |||||||||| |||||| ||  |||||||||| |||||   ||||||||||||||||||    
T  2728814 ctataaaattagggaactaaatttaacttgtgagtatacacttacgcagaacaaaatttcaatttt 2728749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 16787745 - 16787581
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||  ||||||| ||| ||||  |||||    
T  16787745 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaagttcttatcatgctctagtcatgc 16787647  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  16787646 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 16787581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 29728100 - 29727938
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||  |  |||||||  |||||    
T  29728100 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttct--tcgtgttctagtcatgc 29728004  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     |  || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  29728003 ctgcaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 29727938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 23402555 - 23402719
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||| ||||||||||||||| ||| ||||||| ||| ||||| |||| | ||||| ||||||| ||||||||  |||||    
T  23402555 cataattatgaatttcttaaa-caacttataattaatttgtatcttgtttaaagactacaaaatttcactatgaaggttcttatcatgttctagtcatgc 23402653  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||| ||||||||||  |||||||||||||||||||    
T  23402654 ctacaaaattagggaactaaatttgacttgtgagcatacgcttacgcggaacaaaatttcaatttt 23402719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 788
Target Start/End: Original strand, 19034 - 19262
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattg-tgaagattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||| |||||||||||||| || ||||||||||| ||||| ||| | | |||||||||||||  | |||||||||||    
T  19034 cataattatgaatttcttaaa-caattaataattaatttgtccctggtttaaaaacttcaaaatttcgtcggtgaagattcttatggtattctaaccatg 19132  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattg 759  Q
    |  | || |||||||||| |||||||||||||||||||| | ||| | ||||||||||| ||| ||||| | ||||| | |  ||||| ||| |||||||    
T  19133 caaacaaaattagggaacaaaatttgaccagtgagtatatggttatttggaacaaaattgcaaattttgaaacttttggatgaaaaatcaaactaaattg 19232  T
Q  760 aatcgtcattgaagtgctat-aaactttgc 788  Q
    | || |  ||||| |||||| |||||||||    
T  19233 agtcatttttgaaatgctatgaaactttgc 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 561 - 705
Target Start/End: Complemental strand, 40470261 - 40470118
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||| ||||| ||||||||||| |||||||| ||||| ||  |||||    
T  40470261 cataattatgaatttcttaaa-caatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaatattcttatcatgttttagtcatgc 40470163  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttac 705  Q
     || || |||||||||| ||||||| |  |||| |||||||||||    
T  40470162 ctacaaaattagggaactaaatttgccttgtgattatacgcttac 40470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 563 - 726
Target Start/End: Complemental strand, 40401224 - 40401062
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| || |||| ||||||||||||||| |||||||||| ||||||| || ||  ||||  ||||| ||||||| |||||||||| ||||      
T  40401224 taattatgaatttct-aaaataatttataattaattcgtctctcgttcaaaaactccagaatgtcatgttgaaggttcttatgatgttctaactatgccc 40401126  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     ||| ||||||||| ||||||||| | ||||||||||||||||| |||| |||||| |||||||    
T  40401125 gtaaaattagggaatgaaatttgagctgtgagtatacgcttactcggaataaaattgcaatttt 40401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 559 - 778
Target Start/End: Original strand, 29351807 - 29352024
Alignment:
Q  559 tccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccat 658  Q
    |||||||||||||||| ||||||| |||| || |||||||||| |||||  |||||||| |||||  |||| |||||  || ||||  ||||||||||||    
T  29351807 tccataattatgaatttcttaaaa-aattcattattaatttgtatctcgagtaaaaactccaaaatctcatggtgaaagtttttatgctgttctaaccat 29351905  T
Q  659 gcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
    || || ||  |||||||||  ||||||||   |||||||||| ||||||||||||||||| ||| ||| |||| |||| |||  |||||||||| |||||    
T  29351906 gcctacaaagttagggaacataatttgactcatgagtatacgtttactaggaacaaaattgcaa-tttcgcacgttttggttgaaaaataaaaacaaatt 29352004  T
Q  759 gaatcgtcattgaagtgcta 778  Q
     || |||| ||||| |||||    
T  29352005 aaaacgtctttgaaatgcta 29352024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 787
Target Start/End: Complemental strand, 32540185 - 32539972
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    |||||||||| |||| ||||||| ||||||||||||||| ||||||| |||||||| |  |||| |||||| ||||| ||||||||||||||||||||||    
T  32540185 ccataattataaatttcttaaaa-aatttataattaattcgtctctcatttaaaaattataaaatttcattttgaaggttcttattatgttctaaccatg 32540087  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattg 759  Q
    | |             || |||||||||   |||||||| ||||||||||||||||||||||| |||| ||  |||| |||  |||||||||||||||||    
T  32540086 cct-------------acaaaatttgacacatgagtatatgcttactaggaacaaaatttcaa-ttttacatgttttggttgaaaaataaaaataaattg 32540001  T
Q  760 aatcgtcattgaagtgctat-aaactttg 787  Q
    || |||| | ||| |||||| ||||||||    
T  32540000 aaacgtcttcgaaatgctatgaaactttg 32539972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 726
Target Start/End: Original strand, 3435726 - 3435857
Alignment:
Q  595 aatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgag 694  Q
    ||||||| ||||||||||||||| ||||| || ||||||||  ||||||| ||||||||  ||||| || |  |||||||||| |||||||||  |||||    
T  3435726 aatttgtatctcgtttaaaaactacaaaatttaattgtgaatgttcttatcatgttctagtcatgcctacataattagggaactaaatttgacttgtgag 3435825  T
Q  695 tatacgcttactaggaacaaaatttcaatttt 726  Q
    |||| ||||||  |||||||||||||| ||||    
T  3435826 tatatgcttacgcggaacaaaatttcagtttt 3435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 561 - 644
Target Start/End: Original strand, 15838734 - 15838816
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat 644  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| || ||||||||| |||||||    
T  15838734 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaaggttcttat 15838816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 584 - 726
Target Start/End: Complemental strand, 32964206 - 32964064
Alignment:
Q  584 aatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatt 683  Q
    |||| ||||||||||||  | |||||||||||||  ||||||| || |||||| | ||||| ||||| ||| |||||| | || ||||||||||||||||    
T  32964206 aattcataattaatttgcttatcgtttaaaaactctaaaacttaatggtgaaggtccttatgatgttataaacatgctaacaaaattagggaacgaaatt 32964107  T
Q  684 tgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||||| |||| || | |||||||  |||||||| | |||||||    
T  32964106 tgacccgtgattaaatgcttactctgaacaaaaatgcaatttt 32964064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 725
Target Start/End: Complemental strand, 35852656 - 35852495
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||| |||||||||| ||| || | ||||||||| |||   || || |||||  || |||| ||||||||||||||| |    
T  35852656 taattatgaatttcttaaa-caattcataattaattggtcccttgattaaaaactccaattttttatggtgaaagtttttatgatgttctaaccatgcct 35852558  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    |||| ||||| |||| |||||| ||  ||||||||  ||||| | ||||||||||| ||||||    
T  35852557 ataaaattagagaacaaaattttactcgtgagtatttgcttattcggaacaaaattgcaattt 35852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 587 - 653
Target Start/End: Original strand, 36409020 - 36409086
Alignment:
Q  587 ttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttcta 653  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||| || ||||||||    
T  36409020 ttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttctaatcatgttcta 36409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 757
Target Start/End: Complemental strand, 15541919 - 15541743
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||| |||||  ||| |||||| ||||| ||||| | ||| || || |||||| |||||| |||||||||||||||  || || ||||||||||      
T  15541919 aaacaattcataatcgattcgtctcttgtttagaaactcccaaatttaatggtgaaggttcttactatgttctaaccatgtatacaaaattagggaacat 15541820  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaat 757  Q
    ||||||||   |||||||| ||||| |  |||||||| || || |||||||| ||||||||  ||||| |||||||||    
T  15541819 aatttgactcctgagtatatgcttaatgtgaacaaaa-ttaaaattttgcacatttttgttggaaaattaaaataaat 15541743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 631 - 760
Target Start/End: Original strand, 33639154 - 33639282
Alignment:
Q  631 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgca 730  Q
    ||||| |||| ||| ||||| ||||||||| || || |||||||||| ||||||||   ||||||||| ||||||| |||  |||||| ||||||| |||    
T  33639154 gtgaatattcctataatgttgtaaccatgcctacaaaattagggaacaaaatttgatgtgtgagtatatgcttacttggagaaaaattgcaatttt-gca 33639252  T
Q  731 cctttttgttttaaaataaaaataaattga 760  Q
    | |||| |||  ||||| ||||||||||||    
T  33639253 cgttttggttgaaaaatcaaaataaattga 33639282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 629
Target Start/End: Original strand, 32750385 - 32750434
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcat 629  Q
    |||||||| |||||||||| || ||||||||||||||| ||||| |||||    
T  32750385 aaacaattcataattaattcgtatctcgtttaaaaactccaaaatttcat 32750434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 5e-43; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 3292616 - 3292452
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||| |||||    
T  3292616 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctaatcatgc 3292518  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  3292517 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 3292452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 6235957 - 6236121
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  6235957 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 6236055  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6236056 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6236121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 29995703 - 29995507
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  29995703 cataattatgaatttcttaaactaacttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 29995604  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  29995603 ctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 29995507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 42333495 - 42333330
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  |||||    
T  42333495 cataattatgaatttcttaaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgc 42333396  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  42333395 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 42333330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 561 - 779
Target Start/End: Complemental strand, 28877034 - 28876818
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  28877034 cataattatgaatttcttaaa-caatttataattaatttctatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 28876936  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattga 760  Q
     || || |||||||||| |||||||||  ||||||||| ||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||||| |    
T  28876935 ctacaaaattagggaactaaatttgacttgtgagtataagcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaattta 28876837  T
Q  761 atcgtcattgaagtgctat 779  Q
    | || | ||||| ||||||    
T  28876836 aacgactttgaaatgctat 28876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 10352604 - 10352439
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||| |||||    
T  10352604 cataattatgaatttcttaaactaacttataattaatttgtatctcgtttaaaaagtacaaaatttcattgtgaaggttcttatcatgttctaatcatgc 10352505  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  10352504 ctacaaaattagggaactaaatttgacttgtgagtatacacttacacggaacaaaatttcaatttt 10352439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 6689955 - 6689791
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||  ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||| |||||    
T  6689955 cataattatgaatttcttaaa-caatttataattaatttgaatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctaatcatgc 6689857  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||  |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6689856 ctacaaaattagggaattaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6689791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 43143304 - 43143140
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  |||||    
T  43143304 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgc 43143206  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  43143205 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 43143140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 20129762 - 20129927
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  20129762 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 20129860  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  20129861 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 20129927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 26438997 - 26438832
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  26438997 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 26438899  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  26438898 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 26438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 34407002 - 34406837
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  34407002 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 34406904  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  34406903 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 34406837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 43356353 - 43356518
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  43356353 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 43356451  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  43356452 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 43356518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 47501222 - 47501387
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  47501222 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 47501320  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  47501321 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 47501387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 30077356 - 30077191
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||| ||| |||||    
T  30077356 cataattatgaatttcttaaactaacttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttataatcatgc 30077257  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || ||| |||||| |||||||||  |||| ||||| |||||  |||||||||||||||||||    
T  30077256 ctacaaaatttgggaactaaatttgacttgtgaatatacacttacgcggaacaaaatttcaatttt 30077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 563 - 755
Target Start/End: Complemental strand, 33136162 - 33135972
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||| ||||||| ||||||||  ||||| |    
T  33136162 taattatgaatttcttaaa-caatttataattaatttgtatcttgtttaaaaactacgaaatttcattgtgaaggttcttatcatgttctagtcatgcct 33136064  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataa 755  Q
    | || |||||||||| |||||||||   |||||||||| ||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||    
T  33136063 acaaaattagggaactaaatttgacttatgagtatacgtttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataa 33135972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 13012637 - 13012802
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  13012637 cataattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 13012735  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  13012736 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 13012802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 25931157 - 25931321
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| || | ||||||| ||||||| ||||| ||  |||||    
T  25931157 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttaactgtgaaggttcttatcatgttttagtcatgc 25931255  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||| ||||||||||  |||||||||||||||||||    
T  25931256 ctacaaaattagggaactaaatttgacttgtgagaatacgcttacgcggaacaaaatttcaatttt 25931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 35546400 - 35546563
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||| ||  |||||    
T  35546400 cataattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttttagtcatgc 35546498  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  35546499 ctacaa-attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 35546563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 36382065 - 36381902
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| || ||||||||| ||||||| ||||||||  |||||    
T  36382065 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaaggttcttatcatgttctagtcatgc 36381967  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| ||||||| |  ||||||||||||||||  |||| ||||||||||||||    
T  36381966 ctacaaaattagggaactaaatttg-cttgtgagtatacgcttacgcggaataaaatttcaatttt 36381902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 48989776 - 48989971
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||  |||| |||| ||||||| ||||||| ||||||||  |||||    
T  48989776 cataattatgaatttcttaaa-caatttatgattaatttgtatctcgtttaaaaactaaaaaatttcactgtgaaggttcttatcatgttctagtcatgc 48989874  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||  |||||||||  ||| ||||||||||||  ||||||||||||||| ||| |||| |||| |||  ||||| ||||||||||    
T  48989875 ctacaaaattagggaattaaatttgacttgtgggtatacgcttacgcggaacaaaatttcaa-tttggcacgttttggttgaaaaatcaaaataaatt 48989971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 561 - 761
Target Start/End: Complemental strand, 17510951 - 17510749
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat----tatgttctaacc 656  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |  |||| |||||||||||| |||||||    | |||||||  |    
T  17510951 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgtttgttctagtc 17510853  T
Q  657 atgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaa 756  Q
    || | || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||  |||  ||||| ||||||||    
T  17510852 atacctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgtttcagttcaaaaatcaaaataaa 17510754  T
Q  757 ttgaa 761  Q
    |||||    
T  17510753 ttgaa 17510749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 561 - 755
Target Start/End: Original strand, 48130425 - 48130617
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| | ||||||||||||| ||| | || ||||||||| ||||||| ||||||||    |||    
T  48130425 cataattatgaatttcttaaa-caatttataattaatttgtatgtcgtttaaaaactacaatattttattgtgaaggttcttatcatgttctagtattgc 48130523  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataa 755  Q
     || || |||||||||| || ||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||    
T  48130524 ctacaaaattagggaactaattttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataa 48130617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 562 - 761
Target Start/End: Complemental strand, 29134349 - 29134152
Alignment:
Q  562 ataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgct 661  Q
    |||| |||||||| |||||  ||||||| ||||||||| | || |||||| |||| |||||| |||||||||||  ||||||||||||||||| | |||     
T  29134349 ataactatgaatttcttaat-caatttaaaattaatttttgtcacgtttataaacagcaaaatttcattgtgaaatttcttattatgttctaatcttgcc 29134251  T
Q  662 tataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaa 761  Q
    || || ||||| |||| ||||||||||  |||||||||   ||||||||||||||||||||||||   || |||| |||  |||||||||||||||||||    
T  29134250 tacaaaattagagaacaaaatttgacctatgagtatacaaatactaggaacaaaatttcaattttaa-acgttttggttgaaaaataaaaataaattgaa 29134152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 30216462 - 30216301
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||  ||||||||||||||||| |||| |||| |||||| ||| ||||| |||| ||  ||| ||||||| ||||||||  |||||    
T  30216462 cataattatgaatttct--aaacaatttataattaacttgtatctcatttaaagactacaaaatttcactg--aaggttcttatcatgttctagtcatgc 30216367  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  30216366 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 30216301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 30110410 - 30110605
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||| |||| |||||| || ||||||| |||||||| ||||||||||||||| ||||| |||||||||||  || |||| ||||| |   |||||    
T  30110410 cataattataaatttcttaaa-cactttataactaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttattatcatgttattgtcatgc 30110508  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||| ||||| |||||||||| |||||||| |||||||   ||| |||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  30110509 ctacaaaattaaggaactaaatttgacctgtgagtatgcgcttacgcagaataaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 30110605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 561 - 698
Target Start/End: Original strand, 40529464 - 40529600
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||| | ||||| |||||||||||| || |||| ||||||||  |||||    
T  40529464 cataattatgaatttcttaaa-caatttataattaatttgtatcttgtttaaaaattacaaaatttcattgtgaaggtttttatcatgttctagtcatgc 40529562  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtata 698  Q
     || || |||| ||||| |||||||||  |||||||||    
T  40529563 ctacaaaattatggaactaaatttgacttgtgagtata 40529600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 563 - 653
Target Start/End: Complemental strand, 13394959 - 13394870
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttcta 653  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||| ||||||| ||||||||    
T  13394959 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttcta 13394870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 50204797 - 50204643
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||||||||| ||| ||||| |||||||||||| |||||||           |||||    
T  50204797 cataattatgaatttcttaaa-caatttataattaatttatatctcgtttaaagactacaaaatttcattgtgaaggttcttat-----------catgc 50204710  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaac-aaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  ||||| ||||||||||||||    
T  50204709 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaaatttcaatttt 50204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 725
Target Start/End: Complemental strand, 26547017 - 26546856
Alignment:
Q  562 ataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgct 661  Q
    ||||||||||| | ||||||| |||| |||||||||||||   || ||||||||||  |||| ||||| || ||  ||||||| |||||||||| ||||     
T  26547017 ataattatgaaat-cttaaaa-aattcataattaatttgtacgtcttttaaaaactctaaaatttcatggtaaatgttcttatgatgttctaacaatgcc 26546920  T
Q  662 tataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    || || ||||| ||||| ||||||||| |||||||||||||||||  |||||||||| ||||||    
T  26546919 tacaaaattagagaacggaatttgacccgtgagtatacgcttactcagaacaaaattgcaattt 26546856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 580 - 726
Target Start/End: Complemental strand, 13502319 - 13502173
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||| |||||||||  ||||||| |||||||||| ||||| ||||| ||| |  ||||||| ||||||| | ||||| || || ||||||||| ||    
T  13502319 aaacaattcataattaatccgtctctcatttaaaaactccaaaatttcatggtgtaagttcttatgatgttctgagcatgcctacaaaattagggaagga 13502220  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||||||| |  || ||||| ||||||| ||||||||||| |||||||    
T  13502219 aatttgatccatgtgtatatgcttacttggaacaaaattgcaatttt 13502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 9415345 - 9415509
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||| ||||| ||||||| ||||||||||||||  ||||| || || | |||| || |||| || |||| ||||||    
T  9415345 ccataattatgaatttcttaaa-caattcataataaatttgtatctcgtttaaaaaccccaaaattttatggcgaaggtttttatgatattctgaccatg 9415443  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
      || || ||||| ||||| ||||||||  || |||||||||||||| | ||||||||| ||||||    
T  9415444 tctaaaaaattagagaacggaatttgactcgtaagtatacgcttactcgaaacaaaattgcaattt 9415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 561 - 653
Target Start/End: Original strand, 1818164 - 1818256
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttcta 653  Q
    |||||||||||||| ||||||  || ||||||||||||||| |||||||| |||||| ||||| |||||||||||| |||| || ||||||||    
T  1818164 cataattatgaatttcttaaactaacttataattaatttgtatctcgtttgaaaactacaaaatttcattgtgaaggttctaatcatgttcta 1818256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 724
Target Start/End: Complemental strand, 4038425 - 4038262
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||  ||||| |||| |||||| | |||||||||||| || ||||| ||||| |||||  ||||||| | |||  ||||||     
T  4038425 ccataattatgaatttcttaag-caattcataactaatttatatctcgtttaaaacctccaaaatttcatggtgaaagttcttatgaagttaaaaccata 4038327  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatt 724  Q
    | || || ||||| |||||||||| |||| ||||||||| | ||||| ||||||||||| |||||    
T  4038326 cctacaaaattagagaacgaaattagacctgtgagtataggtttactcggaacaaaattgcaatt 4038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 650
Target Start/End: Original strand, 29094594 - 29094683
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgtt 650  Q
    ||||||||||||||| |||||| ||||| |||||||||| || ||||||||||||||| ||||| ||||| |||||| ||||||| |||||    
T  29094594 ccataattatgaatttcttaaa-caattcataattaattcgtatctcgtttaaaaacttcaaaatttcatggtgaaggttcttatgatgtt 29094683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 761
Target Start/End: Original strand, 56225750 - 56225950
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| ||| || ||||  |||||||| ||||||||| ||||||||||  ||||     | |||||| ||||| | ||||||||||||||    
T  56225750 ccataattatgaatttctttaa-caatccataattaaattgtctctcatttaaaaactataaaaaaatttggtgaaggttcttgtgatgttctaaccatg 56225848  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaac-aaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
    | || || |||| ||||||||||||||||  |||||||| | ||||  | ||| |||||| ||| |||||||| |||| |||  ||||||||||||||||    
T  56225849 cctacaaaattatggaacgaaatttgacccatgagtatatgtttacccgaaacgaaaattgcaa-ttttgcacgttttggttgaaaaataaaaataaatt 56225947  T
Q  759 gaa 761  Q
    |||    
T  56225948 gaa 56225950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 31853673 - 31853837
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    |||||| |||||||| |||||| ||||| ||||||||||||| | ||| ||||| ||| ||||  || || |||||| ||||||| | ||||||||||||    
T  31853673 ccataagtatgaatttcttaaa-caattcataattaatttgtatttcggttaaacactccaaatttttatggtgaaggttcttatgacgttctaaccatg 31853771  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || ||||   |||| ||||||||| |||||||||| ||||||  | |||||||| ||||||    
T  31853772 cctacaaaattaaaaaacgtaatttgacccgtgagtatacacttactcagtacaaaattgcaattt 31853837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 668 - 726
Target Start/End: Complemental strand, 13391061 - 13391003
Alignment:
Q  668 attagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||||||||| |||||||||  || |||||||||||||  |||||||||||||||||||    
T  13391061 attagggaactaaatttgacttgttagtatacgcttacgcggaacaaaatttcaatttt 13391003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 608 - 782
Target Start/End: Complemental strand, 49062626 - 49062453
Alignment:
Q  608 tttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttacta 707  Q
    ||||||||||  |||| ||||| |||||| ||| ||| || |||||||| ||| |  || | ||| || ||||| |||||| ||||||||||| | |||     
T  49062626 tttaaaaactctaaaatttcatggtgaaggttcatataatattctaaccttgccttcaaaactagtgagcgaaaattgacctgtgagtatacgatcactt 49062527  T
Q  708 ggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaagtgctataaa 782  Q
    ||||| ||||| ||| |||||||| |||| |||  ||||| ||||||||||||  |||| | ||| |||||||||    
T  49062526 ggaacgaaattgcaa-ttttgcacattttagttgaaaaatcaaaataaattgaggcgtcttcgaaatgctataaa 49062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 644
Target Start/End: Original strand, 54933459 - 54933538
Alignment:
Q  564 aattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat 644  Q
    ||||||||||| || |||||||||||||||||||| || | || |||||||||| ||||| ||||| |||||  |||||||    
T  54933459 aattatgaatttct-aaaacaatttataattaattcgtttatcatttaaaaactccaaaatttcatggtgaaatttcttat 54933538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 644
Target Start/End: Original strand, 5290915 - 5290970
Alignment:
Q  589 ataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat 644  Q
    ||||| ||||||| | ||||||||||||| ||||| |||||||||||| |||||||    
T  5290915 ataataaatttgtttatcgtttaaaaactccaaaatttcattgtgaaggttcttat 5290970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 726
Target Start/End: Original strand, 40529651 - 40529698
Alignment:
Q  679 aaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  40529651 aaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 40529698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 726
Target Start/End: Original strand, 44157182 - 44157235
Alignment:
Q  673 ggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||||| |||||||||  ||||||||||||||||  |||| ||||||||||||||    
T  44157182 ggaactaaatttgacttgtgagtatacgcttacgcggaataaaatttcaatttt 44157235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 3e-41; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 561 - 782
Target Start/End: Complemental strand, 41971977 - 41971757
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| |  |||||||||||||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  41971977 cataattatgaatttcttaaa-caatttataattaatttatacctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 41971879  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt-gttttaaaataaaaataaattg 759  Q
     || || |||||||||  |||||||||| ||||||||||||||||   |||||||||||||| |||||||| ||||| |||  ||||| ||||||||||     
T  41971878 ctacaaaattagggaattaaatttgacctgtgagtatacgcttacgctgaacaaaatttcaa-ttttgcacgtttttggttgaaaaatcaaaataaattt 41971780  T
Q  760 aatcgtcattgaagtgctataaa 782  Q
    || || | ||||| |||||||||    
T  41971779 aaacgactttgaaatgctataaa 41971757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 3829430 - 3829624
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||  |||||||||||| ||||||| ||||||||  |||||    
T  3829430 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactacaaat-ttcattgtgaaggttcttatcatgttctagtcatgc 3829527  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || ||  ||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  3829528 ctacaaagttagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 3829624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 563 - 726
Target Start/End: Original strand, 35907977 - 35908139
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  ||||| |    
T  35907977 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcat 35908075  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  35908076 acaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 35908139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 7433869 - 7434033
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||| || ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| | ||||||||  |||||    
T  7433869 cataattatgaatttctttaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgc 7433967  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  7433968 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 7434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 11958069 - 11957874
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| |||||    
T  11958069 cataattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctaatcatgc 11957971  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || ||||| |||   ||||||||  |||||||||||||||   ||||||||||| ||| |||||||| ||||||||  ||||| ||||||||||    
T  11957970 ctagaaaattagtgaattgaatttgacttgtgagtatacgcttatgcggaacaaaattgcaa-ttttgcacgtttttgttgaaaaatcaaaataaatt 11957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 17445741 - 17445905
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||| ||||| ||||||| ||||||||  |||||    
T  17445741 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcattatgaaggttcttatcatgttctagtcatgc 17445839  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||| ||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  17445840 ctacaaaattaaggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 17445905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 42310659 - 42310495
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  42310659 cataattatgaatttcttaaa-caatttataattaatttgtatctagtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 42310561  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  | |||||||||||||||||    
T  42310560 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcgaaacaaaatttcaatttt 42310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 562 - 726
Target Start/End: Original strand, 23313443 - 23313606
Alignment:
Q  562 ataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgct 661  Q
    |||||||||||||  ||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||     
T  23313443 ataattatgaatttattaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcc 23313541  T
Q  662 tataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    || || |||||||||| |||||||||   |||||||||||||||   ||||||||||||||||||    
T  23313542 tacaaaattagggaactaaatttgacttatgagtatacgcttacgcagaacaaaatttcaatttt 23313606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 32981775 - 32981580
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||| |  |||| || ||||||||| ||||||| ||||||||  |||||    
T  32981775 cataattatgaatttcttaaa-caatttataattaatttgtatctcgttgaaaaattataaaattttattgtgaaggttcttatcatgttctagtcatgc 32981677  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || ||| |||||| |||||||||  ||||||| | ||||||  ||||||||||||||| |||||||| ||||||||  ||||| ||||||||||    
T  32981676 ctacaaaatttgggaactaaatttgacttgtgagtaaatgcttacgcggaacaaaatttcaa-ttttgcacgtttttgttgaaaaatcaaaataaatt 32981580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 561 - 705
Target Start/End: Original strand, 33490153 - 33490296
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| |||||||||||||||| || ||||||||||||||| ||||| |||||||||||| || |||| ||||||||  |||||    
T  33490153 cataattatgaatttcttaaa-caatttataattaattcgtatctcgtttaaaaactacaaaatttcattgtgaaggttattatcatgttctagtcatgc 33490251  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttac 705  Q
     || || |||||||||| |||||||||  | | ||||||||||||    
T  33490252 ctacaaaattagggaactaaatttgacttgcgggtatacgcttac 33490296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 612 - 706
Target Start/End: Original strand, 32944405 - 32944499
Alignment:
Q  612 aaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 706  Q
    |||||| ||||||||||| |||||  ||||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||||||||| |||||||    
T  32944405 aaaactccaaaacttcatggtgaatgttcttatgatgttctaagcatgcttataaaattagggaacaaaatttgatcagtgagtatatgcttact 32944499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 562 - 761
Target Start/End: Original strand, 28463396 - 28463582
Alignment:
Q  562 ataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgct 661  Q
    ||||||||||||| |||||| ||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||           ||||||  |||||     
T  28463396 ataattatgaatttcttaaa-caatttataattaatttgtatttcgtttaaaaactacaaaatttcattgtgaag-----------gttctagtcatgcc 28463483  T
Q  662 tataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaa 761  Q
    |  || |||||||||  || ||||||| ||||||||||||||| | ||||||||||||||| |||||||  |||| |||  ||||| |||||||||||||    
T  28463484 tgcaaaattagggaattaattttgacctgtgagtatacgcttattcggaacaaaatttcaa-ttttgcatgttttggttgaaaaatcaaaataaattgaa 28463582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 584 - 718
Target Start/End: Complemental strand, 5715507 - 5715373
Alignment:
Q  584 aatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatt 683  Q
    |||| |||||||||| || ||||||||||||| | ||||| || || |||||| ||||||| ||||| ||||||||| || || ||||  |||| |||||    
T  5715507 aattcataattaattcgtatctcgtttaaaaattccaaaattttatggtgaagtttcttatgatgttttaaccatgcctacaaaattatagaacaaaatt 5715408  T
Q  684 tgaccagtgagtatacgcttactaggaacaaaatt 718  Q
    |||||||||| ||||  |||||| |||||||||||    
T  5715407 tgaccagtgaatatatacttactcggaacaaaatt 5715373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 610 - 685
Target Start/End: Complemental strand, 7350303 - 7350228
Alignment:
Q  610 taaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttg 685  Q
    ||||||||  |||| ||||| |||||||||||||| || ||||||||||||||| || ||||| ||||||||||||    
T  7350303 taaaaactctaaaatttcatggtgaagattcttatgatattctaaccatgcttacaaaattagtgaacgaaatttg 7350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 726
Target Start/End: Original strand, 42412370 - 42412464
Alignment:
Q  631 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||||||||||||| ||||| |||||||   || |  |||||| |||||||||||||| |||||||||||| || | ||||||||||| |||||||    
T  42412370 gtgaagattcttatgatgttttaaccatatctacagaattaggaaacgaaatttgacctgtgagtatacgc-tattcggaacaaaattgcaatttt 42412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 706
Target Start/End: Complemental strand, 18716396 - 18716322
Alignment:
Q  632 tgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 706  Q
    ||||| ||||||| ||||||||||||||  ||||| |||||||||  |||||||||| |||| |||| |||||||    
T  18716396 tgaaggttcttatgatgttctaaccatgtctataaaattagggaataaaatttgacccgtgaatatatgcttact 18716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 623
Target Start/End: Original strand, 33774629 - 33774691
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaa 623  Q
    ||||||||||||| | |||||| ||||| ||||| |||| ||||| ||||||||||||||||||    
T  33774629 ccataattatgaacttcttaaa-caattcataataaattcgtctcccgtttaaaaactgcaaaa 33774691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 706
Target Start/End: Original strand, 17744594 - 17744716
Alignment:
Q  584 aatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatt 683  Q
    |||| ||||||||||  | |||| ||| |||| | ||||| |||||  ||||| ||||||| ||||||||||||| | || || ||||  |||| |||||    
T  17744594 aattcataattaattcatatctcattttaaaattccaaaatttcatgttgaagtttcttatgatgttctaaccattcctacaaaattatagaacaaaatt 17744693  T
Q  684 tgaccagtgagtatacgcttact 706  Q
    ||||| || |||||| |||||||    
T  17744694 tgacccgtcagtatatgcttact 17744716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 726
Target Start/End: Original strand, 3604778 - 3604863
Alignment:
Q  641 ttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||| ||||||||||||||| || || |||||||||  ||||||||||  ||||||||  |||||| | ||||||||  |||||||    
T  3604778 ttatgatgttctaaccatgcctacaaaattagggaataaaatttgacccttgagtatatacttactcgaaacaaaatagcaatttt 3604863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 1e-40; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 192353 - 192517
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||| ||||| |||||||| ||| ||||||| |||||||   ||||    
T  192353 ccataattatgaatttcttaaa-caatttataattaatttgtatctcatttaaaaactacaaaatttcattgttaaggttcttatcatgttctcgtcatg 192451  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | ||||| |||||||||| ||||||||||  |||||||||| ||||| ||||||||||||||||||    
T  192452 cctataaaattagggaactaaatttgacctatgagtatacgtttactcggaacaaaatttcaattt 192517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 566 - 726
Target Start/End: Original strand, 23034427 - 23034586
Alignment:
Q  566 ttatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttata 665  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||||||  |||| || ||||||||  ||||||||||||| ||| ||||| || |    
T  23034427 ttatgaatttcttaaa-caatttataattaatttgtctctcgttttaaaactataaaatttaattgtgaaagttcttattatgttataatcatgcctaca 23034525  T
Q  666 agattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | |||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  23034526 aaattaaggaatgaaatttgacctgtgagtatacgcttactaggaacaaaattttaatttt 23034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 13818426 - 13818590
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| || |||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  13818426 cataattatgaatttcttaaa-cagtttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 13818524  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  ||||||||| |||||||||    
T  13818525 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaacttcaatttt 13818590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 15959665 - 15959470
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||  ||||||||||||||||||   |||||||||||||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  15959665 cataattatgaatttcttaat-caatttataattaatttgcagctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 15959567  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || ||| |||||| |||||||||| |||||||||||||||   ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  15959566 ctacaaaatttgggaactaaatttgacctgtgagtatacgcttatgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 15959470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 31501438 - 31501243
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||| || || |||||||||| | ||||||| ||||||||  |||||    
T  31501438 cataattatgaatttcttaaa-caatttataattaatttgtatcttgtttaaagactacataatttcattgtgatggttcttatcatgttctagtcatgc 31501340  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  31501339 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 31501243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 31680814 - 31680978
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| || |||| ||||||| ||||||||  |||||    
T  31680814 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgc 31680912  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  31680913 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 31680978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 33430768 - 33430932
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| || |||| ||||||| ||||||||  |||||    
T  33430768 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgc 33430866  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  33430867 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 33430932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 16333619 - 16333455
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||| | ||||| ||||||| |||| ||||||| || || ||  |||||    
T  16333619 cataattatgaatttcttaaaa-aatttataattaatttgtatcttgtttaaaaattacaaaatttcattgggaaggttcttatcatattttagtcatgc 16333521  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    ||| || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  16333520 ttacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 16333455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 31271854 - 31272018
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||| |||||||||||||||| |||||     
T  31271854 cataattatgaatttcttaaacca-tttataattaatttgtctctcgtttcaaaactgaaaaactttattctgaaggttcttattatgttctagccatgg 31271952  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     ||  | ||||| |||| || ||||||  |||||||||| ||| ||||||||||||||||||||||    
T  31271953 ctaccaaattagtgaacaaattttgacttgtgagtatacacttgctaggaacaaaatttcaatttt 31272018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 563 - 726
Target Start/End: Complemental strand, 26283034 - 26282871
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatgct 661  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  |||||     
T  26283034 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcc 26282936  T
Q  662 tataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  26282935 tacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 26282871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 39657249 - 39657082
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  39657249 cataattatgaatttattaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 39657151  T
Q  661 ttataagattagggaacgaaatttgacca---gtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||| ||   |||||||||| |||||  |||||||||||||||||||    
T  39657150 ctacaaaattagggaactaaatttgatcacttgtgagtatacacttacgcggaacaaaatttcaatttt 39657082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 706
Target Start/End: Original strand, 10034351 - 10034495
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |  |||| |||||||||||| ||||||| ||||||||  |||||    
T  10034351 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgttctagtcatgc 10034449  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttact 706  Q
     || || |||||||||| |||||||||  |||||||||||||||||    
T  10034450 ctacaaaattagggaactaaatttgacttgtgagtatacgcttact 10034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 12278576 - 12278412
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| | | ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  12278576 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagattacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 12278478  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||| |||||||  |||||||||||| ||||||    
T  12278477 ctacaaaattagggaactaaatttgacttgtgagtattcgcttacgcggaacaaaattttaatttt 12278412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 560 - 759
Target Start/End: Complemental strand, 38269130 - 38268944
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||| ||||| |||||||||||| |||||||           ||||    
T  38269130 ccataattatgaatttcttaaa-caatttataattaatttgtatctcgtataaaaactacaaaatttcattgtgaaggttcttat-----------catg 38269043  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattg 759  Q
    | || || |||||||||| |||||||||| || |||||||||||||| ||||||||||||||| |||||||| |||| |||  ||||| |||||||||||    
T  38269042 cctacaaaattagggaactaaatttgacctgtaagtatacgcttactcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaattg 38268944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 563 - 726
Target Start/End: Original strand, 37255054 - 37255216
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||||||||| ||| ||||| |||| |  |||| ||||||| ||||||||  ||||| |    
T  37255054 taattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaagactacaaaatttcactcggaaggttcttatcatgttctagtcatgcct 37255152  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  37255153 acaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 37255216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 36293339 - 36293174
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagatt-cttattatgttctaaccatg 659  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||  | ||||| |||||||||||| || ||||| ||||||||  ||||    
T  36293339 cataattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatg 36293241  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||| ||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  36293240 cctacaaaattaggaaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 36293174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 1776094 - 1775931
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  1776094 cataattatgaatttcttaaa-caatttataattaatctgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 1775996  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || ||||| |||  ||||||| |  ||||||||||||||||  |||||||||||||||||||    
T  1775995 ctaaaaaattagagaattaaatttg-cttgtgagtatacgcttacgcggaacaaaatttcaatttt 1775931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 17332339 - 17332175
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||| ||||||| ||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  17332339 cataattatgaatttcttaag-caatttataattaatttgtatcttgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 17332241  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||| ||||| |||||||||  | ||||||| ||||||  |||||||||||||||||||    
T  17332240 ctacaaaattaaggaactaaatttgacttgcgagtatatgcttacgcggaacaaaatttcaatttt 17332175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 36291818 - 36291982
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| |||||||||||||||  |||| || ||||||||| ||||||| ||||||||  |||||    
T  36291818 cataattatgaatt-cttaaactaacttataattaatttgtatctcgtttaaaaactataaaattttattgtgaaggttcttatcatgttctagtcatgc 36291916  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||   ||||||||| |||||  |||||||||||||||||||    
T  36291917 ctacaaaattagggaactaaatttgacttatgagtatacacttacgcggaacaaaatttcaatttt 36291982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 39435145 - 39435310
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  |||     
T  39435145 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcata 39435243  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||| ||||| ||||||  |||||||||||||||||||    
T  39435244 cctacaaaattagggaactaaatttgacttgtgggtataagcttacgcggaacaaaatttcaatttt 39435310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 587 - 726
Target Start/End: Original strand, 43069329 - 43069468
Alignment:
Q  587 ttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttga 686  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||| ||||| ||||||| ||||||||  ||||  |  || |||||||||| ||||||||    
T  43069329 ttataattaatttgtatctcgtttaaaaactacaaaatttcattttgaaggttcttatcatgttctagtcatgtctgcaaaattagggaactaaatttga 43069428  T
Q  687 ccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |  |||||||||| |||||  |||||||||||||||||||    
T  43069429 cttgtgagtatacacttacgcggaacaaaatttcaatttt 43069468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 726
Target Start/End: Original strand, 27750683 - 27750846
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||  ||||| ||| |||||||||| |||||||||||||| ||||| ||| | |||||  || |||| ||||||||||||||    
T  27750683 ccataattatgaatttcttaa--caattaata-ttaatttgtcgctcgtttaaaaactacaaaatttcttggtgaatgtttttatgatgttctaaccatg 27750779  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
      || |  |||||||||  ||||||||||  |||||||| ||||||| |||| |||||| |||||||    
T  27750780 gctacacaattagggaattaaatttgacccatgagtatatgcttactcggaagaaaattgcaatttt 27750846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 561 - 702
Target Start/End: Original strand, 16155446 - 16155584
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||  ||||||||||||||||||||||  ||||||||| |  ||||  | ||||||||| ||||||| ||||||||  |||||    
T  16155446 cataattatgaatttcttaac-caatttataattaatttgtctc--gtttaaaaattataaaatattattgtgaaggttcttatcatgttctagtcatgc 16155542  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgct 702  Q
     || || |||||||||| |||||||||  |||||||||||||    
T  16155543 ctacaaaattagggaactaaatttgacttgtgagtatacgct 16155584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 560 - 630
Target Start/End: Complemental strand, 30297673 - 30297604
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcatt 630  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30297673 ccataattatgaatttcttaaa-caatttataattaatttgtctctcgtttaaaaactgaaaaaattcatt 30297604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 560 - 683
Target Start/End: Complemental strand, 11779282 - 11779160
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    |||||||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| ||||| || ||  |||||  | |||| ||||| ||||||||    
T  11779282 ccataattatgaattttttaaa-caattcataattaatttgtcgctcgtttaaaaactccaaaagtttatgatgaaggcttttatgatgttttaaccatg 11779184  T
Q  660 cttataagattagggaacgaaatt 683  Q
    | ||||| ||| | ||||||||||    
T  11779183 cctataaaattggcgaacgaaatt 11779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 705
Target Start/End: Original strand, 28801712 - 28801791
Alignment:
Q  626 tcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttac 705  Q
    ||||||||||| ||||||| ||||||||  |||||||| || |||||||||| |||||||||  ||||||||||||||||    
T  28801712 tcattgtgaaggttcttatcatgttctagtcatgcttacaaaattagggaactaaatttgacttgtgagtatacgcttac 28801791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 592 - 666
Target Start/End: Original strand, 24792894 - 24792968
Alignment:
Q  592 attaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataa 666  Q
    |||||||||  ||||||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||| |||||    
T  24792894 attaatttgcatctcgtttaaaaactccaaaatttcatggtgaaggttcttataatgttctaaccatgcctataa 24792968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 726
Target Start/End: Complemental strand, 18266312 - 18266162
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaa----ccatgcttataagattaggga 675  Q
    |||||||| ||||||| |||||||||| |||||||||| ||||| | ||| |||||| ||||||| || ||||||    |||||| || || ||| ||||    
T  18266312 aaacaattcataattagtttgtctctcatttaaaaacttcaaaattccatggtgaaggttcttatgatattctaatcgaccatgcctacaaaatttggga 18266213  T
Q  676 acgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
      ||||||||||| |||| |||| |||||||  || ||||||| |||||||    
T  18266212 gtgaaatttgacctgtgactatatgcttactcagagcaaaattgcaatttt 18266162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 656
Target Start/End: Original strand, 35338308 - 35338408
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaa 654  Q
    ||||||||||||||||||||  |||||| |||| |||||||||| || |||| |||||||||  ||||| || || |||||  ||||||| |||||||||    
T  35338308 attttccataattatgaattttttaaaa-aattcataattaattcgtatctcatttaaaaaccccaaaattttatggtgaacgttcttatgatgttctaa 35338406  T
Q  655 cc 656  Q
    ||    
T  35338407 cc 35338408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 660
Target Start/End: Original strand, 23034271 - 23034351
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||||||||||||||  ||||||||||  |||| || ||| ||||| |||||||||| ||  ||||||||    
T  23034271 aaacaatttataattaatttgtctcttatttaaaaactataaaatttaattttgaaggttcttattatattacaaccatgc 23034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 761
Target Start/End: Complemental strand, 30297606 - 30297492
Alignment:
Q  643 attatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgtttt 742  Q
    |||||||||| ||||||| || || |||||||||  |||||||||  ||||||   |||||| ||| ||||||||||||| |||||||| |||| |||      
T  30297606 attatgttctgaccatgcctacaaaattagggaataaaatttgacatgtgagt---cgcttaatagaaacaaaatttcaa-ttttgcacgttttagttgg 30297511  T
Q  743 aaaataaaaataaattgaa 761  Q
    |||| ||||||||||||||    
T  30297510 aaaacaaaaataaattgaa 30297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 750
Target Start/End: Original strand, 8788264 - 8788452
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| ||||||  ||||   |||||||  || ||| |||||| ||||  |||| || || |||||| ||||||| ||||||||||||||    
T  8788264 ccataattatgaatttcttaaat-aattaggaattaatccgtatcttgtttaagaactcgaaaatttaatggtgaagtttcttatgatgttctaaccatg 8788362  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaa 750  Q
    | || || ||| | ||| | ||||||||   |||| ||||||||||| | ||||||||| | | |||||||| |||| |||| ||||||||    
T  8788363 cctacaaaattggagaatggaatttgacttatgagaatacgcttactcgaaacaaaattgcca-ttttgcacattttggtttaaaaataaa 8788452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 658
Target Start/End: Complemental strand, 35911451 - 35911354
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccat 658  Q
    ||||||||||||||| |||||| ||||| ||| ||||||  |||||||||| |||| |  |||| ||||| |||||| || |||| |||||||||||||    
T  35911451 ccataattatgaatttcttaaa-caattcatagttaattcatctctcgtttgaaaaatataaaatttcatggtgaaggtttttatgatgttctaaccat 35911354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 584 - 644
Target Start/End: Original strand, 20368513 - 20368573
Alignment:
Q  584 aatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat 644  Q
    |||| ||||| ||||||| | ||||||||||||| ||||| |||||||||||| |||||||    
T  20368513 aattcataataaatttgtttatcgtttaaaaactccaaaatttcattgtgaaggttcttat 20368573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 688
Target Start/End: Original strand, 1050565 - 1050650
Alignment:
Q  603 tctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgacc 688  Q
    |||||||||||||||  |||| || || |||||  |||||||   |||||||| || |||| || |||||||||||||||||||||    
T  1050565 tctcgtttaaaaactctaaaattttatggtgaatgttcttatgtagttctaactattcttacaaaattagggaacgaaatttgacc 1050650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 617
Target Start/End: Original strand, 33094370 - 33094407
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaact 617  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  33094370 aaacaattcataattaatttttctctcgtttaaaaact 33094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 1e-40; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 27935624 - 27935818
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| |||||| |||||||||||| || |||||||||||| ||||| |||||||||||||||||||| ||||||||  |||||    
T  27935624 cataattatgaatttcttaaa-caatttgtaattaatttgtatc-cgtttaaaaactacaaaatttcattgtgaagattcttataatgttctagtcatgc 27935721  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  |||||||||| |||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  27935722 ctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 27935818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 40081459 - 40081295
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |  |||| |||||||||||| ||||||| ||||||||  |||||    
T  40081459 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgttctagtcatgc 40081361  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  40081360 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 40081295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 5135735 - 5135930
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||| ||||||| ||||| ||  |||||    
T  5135735 cataattatgaatttcttaaa-caatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttatagtcatgc 5135833  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     ||  | | |||||||| |||||||||  ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  5135834 ctacgaaaatagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 5135930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 6930613 - 6930449
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||| | |||||| ||||||||||||||||||| ||||||||||| ||| ||||| ||| |||||||| ||||||| ||||||||  |||||    
T  6930613 cataattatgaacttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttccttgtgaaggttcttatcatgttctagtcatgc 6930515  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6930514 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6930449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 19565221 - 19565056
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| |||| |||||||||| ||||| |||||||||||| ||||||| ||||||||| |||||    
T  19565221 cataattatgaatttcttaaactaacttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttctaatcatgc 19565122  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || ||||| |||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  19565121 ctacaaaattagagaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaatttt 19565056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 6269144 - 6268979
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  6269144 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 6269046  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6269045 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6268979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 22968162 - 22967997
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  22968162 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 22968064  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  22968063 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 22967997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 45183428 - 45183591
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||| ||  |||||    
T  45183428 cataattatgaatttcttaaaa-aatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttttagtcatgc 45183526  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  45183527 ctacaa-attagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 45183591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 45336320 - 45336485
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| |||| |||||||||| ||||| |||||||| ||| ||||||| ||||||||| |||||    
T  45336320 cataattatgaatttcttaaactaacttataattaatttgtatctcatttaaaaactacaaaatttcattgtaaaggttcttatcatgttctaatcatgc 45336419  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || ||| |||||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  45336420 ctacaaaatttgggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaatttt 45336485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 19390595 - 19390760
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagatt-cttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| |||||||||||| || ||||| ||||||||  ||||    
T  19390595 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatg 19390693  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||| ||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  19390694 cctacaaaattaggaaactaaatttgactggtgagtatacgcttacgcggaacaaaatttcaatttt 19390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 565 - 757
Target Start/End: Complemental strand, 29564868 - 29564674
Alignment:
Q  565 attatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttat 664  Q
    |||||||||| |||||| ||||||||||||||||||||||   ||||||||||  |||| |||||||||||| ||||||||||||||||||||||| ||     
T  29564868 attatgaatttcttaaa-caatttataattaatttgtctca--tttaaaaactataaaatttcattgtgaaggttcttattatgttctaaccatgcctac 29564772  T
Q  665 aagattagggaac--ga---aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt-gttttaaaataaaaataaat 757  Q
    || |||| |||||  ||   ||||||||  |||||||||||||||||||||||||||||| || |||||||| ||||| |||  |||||||||||||||    
T  29564771 aaaattaaggaacatgatttaatttgacatgtgagtatacgcttactaggaacaaaattt-aaattttgcacgtttttggttgaaaaataaaaataaat 29564674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 39772239 - 39772404
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattc-ttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| |||||||||||  ||| |||| ||||||||  ||||    
T  39772239 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgttccttatcatgttctagtcatg 39772337  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  39772338 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 39772404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 6503289 - 6503125
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| | ||| |||| ||||||| ||||||| ||  ||||  |||||    
T  6503289 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacgaaatttcactgtgaaggttcttatcatactctagtcatgc 6503191  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6503190 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6503125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 33041400 - 33041561
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||| |||||| ||| ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  33041400 cataattatgaatttct--aaacaatttataattaatttgtatctcatttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 33041497  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| ||||||||||  || ||||||||||||  |||||||||||||||||||    
T  33041498 ctacaaaattagggaactaaatttgacc--tgtgtatacgcttacgcggaacaaaatttcaatttt 33041561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 34083838 - 34083675
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  34083838 cataattatgaatttcttaaa-caatttataattaatttatatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 34083740  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| ||||||| |   |||||| ||||||||  |||||||||||||||||||    
T  34083739 ctacaaaattagggaactaaatttg-cttctgagtacacgcttacgcggaacaaaatttcaatttt 34083675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 679 - 789
Target Start/End: Original strand, 8257407 - 8257517
Alignment:
Q  679 aaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtcattgaagtgcta 778  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||| |||  ||||||||||||||||||| |||| ||||| |||||    
T  8257407 aaatttgatctgtgagtatacgcttactaggaacaaaatttcaa-ttttgcacgttttggttgaaaaataaaaataaattgaaacgtctttgaaatgcta 8257505  T
Q  779 t-aaactttgca 789  Q
    | ||||||||||    
T  8257506 tgaaactttgca 8257517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 592 - 726
Target Start/End: Complemental strand, 11017959 - 11017825
Alignment:
Q  592 attaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagt 691  Q
    |||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  ||||| || || |||||||||| |||||||||  ||    
T  11017959 attaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgt 11017860  T
Q  692 gagtatacgcttactaggaacaaaatttcaatttt 726  Q
     |||||||||||||  |||||||||||||||||||    
T  11017859 aagtatacgcttacgcggaacaaaatttcaatttt 11017825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 580 - 726
Target Start/End: Original strand, 27912469 - 27912615
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||| |||||||||||||| |||||||||||||| ||||| ||||| ||| |  ||||||| |||||| |||||||| |  ||  ||||||||| |    
T  27912469 aaacaattcataattaatttgtccctcgtttaaaaactccaaaatttcatggtgcatgttcttatcatgttccaaccatgcctgcaaatttagggaacaa 27912568  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||||||||  |||||||| |||||||  || ||||||| |||||||    
T  27912569 aatttgacctatgagtatatgcttactcagatcaaaattacaatttt 27912615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 580 - 699
Target Start/End: Original strand, 35937687 - 35937806
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||||||||| |||||| ||||||| |||||||||| |||| || || ||||  | | |     
T  35937687 aaacaattcataattaatttgtatctcttttaaaaactccaaaacttcatggtgaaggttcttatgatgttctaactatgcctacaaaattacaggatgg 35937786  T
Q  680 aatttgaccagtgagtatac 699  Q
    ||||||||| ||||||||||    
T  35937787 aatttgacccgtgagtatac 35937806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 555 - 635
Target Start/End: Original strand, 38282857 - 38282936
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa 635  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  38282857 atttcccataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactacaagatttcattgtgaa 38282936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 644
Target Start/End: Original strand, 8257275 - 8257357
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttat 644  Q
    |||||||||||||| |||||  ||||||||||||||||| ||| |||||||||||||  |||| |||||||||||| |||||||    
T  8257275 cataattatgaatttcttaag-caatttataattaatttttctttcgtttaaaaactttaaaatttcattgtgaaggttcttat 8257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 706
Target Start/End: Original strand, 7468824 - 7468899
Alignment:
Q  631 gtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttact 706  Q
    |||||| || ||||||||||||||| |||| ||||| ||||| | ||||||||||| | ||||||||| |||||||    
T  7468824 gtgaaggtttttattatgttctaactatgcctataaaattagaggacgaaatttgaaccgtgagtataagcttact 7468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 704 - 766
Target Start/End: Complemental strand, 3159388 - 3159327
Alignment:
Q  704 actaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgtc 766  Q
    ||||||||||||||||||||||| |||| |||| |||  ||||||||||||||||||| ||||    
T  3159388 actaggaacaaaatttcaatttt-gcacattttggttgaaaaataaaaataaattgaaacgtc 3159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 642
Target Start/End: Complemental strand, 19814847 - 19814766
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattctt 642  Q
    ||||||||||| ||| ||||||| |||| |||||| ||| || ||||||||||||||| ||||| ||||| |||||| |||||    
T  19814847 ccataattatgtatttcttaaaa-aattcataattgattcgtatctcgtttaaaaacttcaaaatttcatggtgaaggttctt 19814766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 617
Target Start/End: Complemental strand, 38415534 - 38415473
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaact 617  Q
    |||||||||||| |||||||  |||||  |||||||||||||||||||||| |||||||||||    
T  38415534 attttccataatcatgaatttgttaaat-aatttataattaatttgtctctagtttaaaaact 38415473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 697
Target Start/End: Complemental strand, 219306 - 219189
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||| | ||||||||| | |||||||||||| || ||||| || |  |||||| ||||| | ||||| ||||||||| || || ||||| |||| |    
T  219306 aaacaattcagaattaatttttgtctcgtttaaaatctccaaaatttaaaggtgaagtttcttgtgatgttataaccatgcctacaaaattagagaacaa 219207  T
Q  680 aatttgaccagtgagtat 697  Q
    |||||||||  |||||||    
T  219206 aatttgacccatgagtat 219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 10842293 - 10842155
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||||||||||||||  |  |||||||||||| |  |||  ||||| |||||||||||| | ||||| |||| |||| || |   ||| ||||| |    
T  10842293 aaacaatttataattaattaattcctcgtttaaaaattctaaactttcatggtgaagattcttgtcatgttataacaatgcctaaatagttacggaacaa 10842194  T
Q  680 aatttgaccagtgagtatacgcttactaggaacaaaatt 718  Q
    ||||||||  |||| |||| | ||||| |||||||||||    
T  10842193 aatttgacacgtgactatatgtttacttggaacaaaatt 10842155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 31581339 - 31581175
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  31581339 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 31581241  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  | |||||||||||||||||    
T  31581240 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcgaaacaaaatttcaatttt 31581175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 45419030 - 45419194
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  45419030 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 45419128  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  45419129 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 45419194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 563 - 764
Target Start/End: Complemental strand, 7072252 - 7072053
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||| |||| ||||| ||||||| |||| ||||||| ||||||||  ||||| |    
T  7072252 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaataactacaaaatttcattgggaaggttcttatcatgttctagtcatgcct 7072154  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaat 762  Q
    | || |||||||||| |||||||||  ||| ||||||||||||   |||||||||||||| |||||||| |||| |||  ||||| |||||||||| |||    
T  7072153 acaaaattagggaactaaatttgacttgtgggtatacgcttacgctgaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatttaat 7072055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 12756557 - 12756393
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||||  |||||    
T  12756557 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 12756459  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||||||||||   |||||||||||||||||||    
T  12756458 ctacaaaattagggaactaaatttgacttgtgagtatacgcttatgcggaacaaaatttcaatttt 12756393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 18982038 - 18982202
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||||||||||| | ||||| ||||| |||||| ||||||| ||||||||  |||||    
T  18982038 cataattatgaatttcttaaa-caatttataattaatttttatctcgtttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgc 18982136  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  18982137 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 18982202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 35963139 - 35963303
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| | ||||||||  |||||    
T  35963139 cataattatgaatttattaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgc 35963237  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  35963238 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 35963303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 6403522 - 6403357
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  6403522 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 6403424  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  6403423 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 6403357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 17444759 - 17444594
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagatt-cttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| |||||||||||| || ||||| ||||||||  ||||    
T  17444759 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatg 17444661  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  17444660 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 17444594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 41251352 - 41251187
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  41251352 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 41251254  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  41251253 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 41251187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 2957864 - 2957700
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||| ||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| ||||||||| || ||||||| ||||||||  |||||    
T  2957864 catatttatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgtaggttcttatcatgttctagtcatgc 2957766  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  2957765 ctacaaaattagggaactaaatttgacttgtgagtatacccttacgcggaacaaaatttcaatttt 2957700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 563 - 727
Target Start/End: Complemental strand, 32126905 - 32126742
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||| | ||||| || |||| ||||||||  ||||| |    
T  32126905 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcactttgaaggttattatcatgttctagtcatgcct 32126807  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattttt 727  Q
    | || |||||||||| |||||||||  ||||||||||||||||  ||||||||||||||||||||    
T  32126806 acaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttt 32126742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 563 - 758
Target Start/End: Complemental strand, 4554910 - 4554718
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||  ||||||| ||||||||  ||||| |    
T  4554910 taattaagaatttcttaaa-caatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttcttatcatgttctagtcatgcct 4554812  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
    | || ||||| |||  |||||||||  || ||||||||||| |  ||||||||||||||| ||||||| ||||||| || ||||||||||||||||    
T  4554811 acaaaattagagaattaaatttgacttgttagtatacgcttgcgtggaacaaaatttcaa-ttttgca-ctttttggttgaaaataaaaataaatt 4554718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 2286237 - 2286400
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| |||||||||||||| |||| ||||||||||||| | ||||| |||||||||||| ||||||| ||||||||  |||||    
T  2286237 cataattatgaatttcttaaa-caatttataattaagttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 2286335  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||| ||| ||||||| |  ||||||||||||||||  |||||||||||||||||||    
T  2286336 ctacaaaattaggaaactaaatttg-cttgtgagtatacgcttacacggaacaaaatttcaatttt 2286400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 561 - 758
Target Start/End: Complemental strand, 26162422 - 26162227
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||  ||||| |||||||||| |||||||| ||||||||||||||| ||||| |||||| ||||| | ||||| ||||||||  ||| |    
T  26162422 cataattatgaattttttaaa-caatttataactaatttgtatctcgtttaaaaactacaaaatttcattctgaaggtccttatcatgttctagtcatac 26162324  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
     || || |||||||||| |||||||||  |||| |||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| ||||||||||    
T  26162323 ctacaaaattagggaactaaatttgacttgtgactatacgcttacgcggaacaaaatttcaa-ttttgcacgttttggttgaaaaatcaaaataaatt 26162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 560 - 725
Target Start/End: Complemental strand, 37621782 - 37621618
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| ||||||  |||| |||||||||| || ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||    
T  37621782 ccataattatgaatttcttaaat-aattcataattaattcgtatctcgtttaaaaacttcaaaatttcattgtgaaggttcttatgatgttctaaccatg 37621684  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || ||||| ||||  | |||||   ||||||||| ||||||| ||||||||||| ||||||    
T  37621683 cctacaaaattagagaacagactttgattcgtgagtatatgcttactcggaacaaaattgcaattt 37621618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 580 - 705
Target Start/End: Original strand, 26238406 - 26238531
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacga 679  Q
    |||||||||||||||||||||| |||| |||||||||| ||||| |||||||||||| ||||||| ||||||||  ||||| || || |||||||||| |    
T  26238406 aaacaatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaacta 26238505  T
Q  680 aatttgaccagtgagtatacgcttac 705  Q
    |||||| |  ||||||||||||||||    
T  26238506 aatttgccttgtgagtatacgcttac 26238531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 601 - 758
Target Start/End: Original strand, 45121695 - 45121851
Alignment:
Q  601 tctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacg 700  Q
    ||||| ||||||||||| ||||| |||||||||||| ||||||| ||||| ||  ||| | || || |||||||||| |||||||||  |||||||||||    
T  45121695 tctcttgtttaaaaactacaaaatttcattgtgaagtttcttatcatgttttagtcatacgtacaaaattagggaactaaatttgacatgtgagtatacg 45121794  T
Q  701 cttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaatt 758  Q
    |||||| |||||||||||||||||||| ||| |||| |||  ||||| ||||||||||    
T  45121795 cttacttggaacaaaatttcaattttt-cacgttttggttgaaaaatcaaaataaatt 45121851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 567 - 761
Target Start/End: Original strand, 26591496 - 26591687
Alignment:
Q  567 tatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataa 666  Q
    |||||||| |||||| ||||| ||||||||||||| |||||||||||||||  |||| ||| | |||||| |||||| |||| ||||||||||| || ||    
T  26591496 tatgaatttcttaaa-caattcataattaatttgtatctcgtttaaaaactctaaaatttcttggtgaaggttctta-tatggtctaaccatgcctaaaa 26591593  T
Q  667 gattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaa 761  Q
     ||||| ||| | |||||||||  |||||||||| ||||| ||| ||||||| ||| ||| |||| |||| |||  |||||||||||||||||||    
T  26591594 aattagagaatggaatttgacccatgagtatacgtttactcggatcaaaattgcaa-tttcgcacgttttggttgaaaaataaaaataaattgaa 26591687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 42442433 - 42442597
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||| ||||||||| |||||| ||||||||| ||||||| | ||||||||||||| |  |||| |||||||||||  ||||||| ||||||||  |||||    
T  42442433 catatttatgaatttcttaaa-caatttatagttaatttatatctcgtttaaaaattataaaatttcattgtgaatgttcttatcatgttctagtcatgc 42442531  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||| ||||| |||||||||  ||||||||||||||||   ||||||||||||||||||    
T  42442532 ctacaaaattatggaactaaatttgacttgtgagtatacgcttacgcagaacaaaatttcaatttt 42442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 561 - 698
Target Start/End: Complemental strand, 44084321 - 44084185
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| || |||| || |||||  |||||    
T  44084321 cataattatgaatttcttaaat-aatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttattatcattttctagtcatgc 44084223  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtata 698  Q
     || || |||||||||| |||||||||  |||||||||    
T  44084222 ctacaaaattagggaactaaatttgacttgtgagtata 44084185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 566 - 777
Target Start/End: Original strand, 18829309 - 18829518
Alignment:
Q  566 ttatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttata 665  Q
    ||||||||| |||||| ||||| |||||||||| || | | ||||||||||| | ||| ||||  |||||  ||||||| |||||||||| |||| || |    
T  18829309 ttatgaatttcttaaa-caattcataattaattcgtatattgtttaaaaacttctaaatttcacggtgaatgttcttatgatgttctaactatgcctaca 18829407  T
Q  666 agattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaattgaatcgt 765  Q
    | ||||| ||||| ||||||||| |||||||||| |||||| ||||||||||| ||| ||| |||| |||| |||  ||||| ||||||||| ||| |||    
T  18829408 aaattagagaacggaatttgacccgtgagtatacacttactcggaacaaaattgcaa-tttcgcacgttttcgttgaaaaattaaaataaatcgaaacgt 18829506  T
Q  766 cattgaagtgct 777  Q
    | ||||| ||||    
T  18829507 ctttgaaatgct 18829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 561 - 678
Target Start/End: Original strand, 21556543 - 21556659
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||| |||||| ||||||||    
T  21556543 cataattatgaatttcttaaa-caattcataattaatttgtatctcgtttaaaaactccaaaatttcatggtgaaggttcttatgatgttccaaccatgc 21556641  T
Q  661 ttataagattagggaacg 678  Q
     || || ||||| |||||    
T  21556642 ctacaaaattagagaacg 21556659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 816777 - 816613
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||| |||||||||| ||||| ||||  ||||   ||||||| ||| ||  |||||||    
T  816777 cataattatgaattttttaaa-caattcataattaatttgtctctcctttaaaaactccaaaatttcaaagtgatagttcttataatgctcctaccatgc 816679  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||| ||| |||||||||| || |||||||||||||| | || |||||| |||||||    
T  816678 ctacaaaattaggaaacaaaatttgacccgtaagtatacgcttactcgaaataaaattgcaatttt 816613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 561 - 725
Target Start/End: Complemental strand, 17373558 - 17373394
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttct-aaccatg 659  Q
    |||||||||||||| | ||||| ||||  ||||||||| || || | |||| ||||| ||||| ||||| |||||  ||||||| ||||| | |||||||    
T  17373558 cataattatgaatttcctaaaa-aattcgtaattaattcgtatcacatttagaaactccaaaatttcatggtgaatgttcttatgatgtttttaaccatg 17373460  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || ||||| ||| ||||||||||| ||||||||||||||| | ||||||||||| ||||||    
T  17373459 cctacaaaattagagaatgaaatttgacccgtgagtatacgcttatttggaacaaaattgcaattt 17373394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 561 - 755
Target Start/End: Complemental strand, 8059052 - 8058871
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||  ||| ||||||| ||| | ||| ||||||| |||| |||||||           |||||    
T  8059052 cataattatgaatttcttaaa-caatttataattaatttgcatcttgtttaaagactacgaaatttcattgggaaggttcttat-----------catgc 8058965  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataa 755  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||| || |||||||| |||| |||  ||||| |||||||    
T  8058964 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaattttaa-ttttgcacgttttggttgaaaaatcaaaataa 8058871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 559 - 704
Target Start/End: Original strand, 25391425 - 25391568
Alignment:
Q  559 tccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccat 658  Q
    ||||||||||| ||||  ||||| ||||| |||||||| || | |||| |||||||||| ||||| || || |||||  | ||||| |||||||||||||    
T  25391425 tccataattataaattttttaaa-caattcataattaacttatttctcctttaaaaactccaaaattttatggtgaaagtacttatgatgttctaaccat 25391523  T
Q  659 gcttataagattagggaacgaaatttgaccagtgagtatacgctta 704  Q
    || || || ||||| ||| |||||||||||| |||||||| |||||    
T  25391524 gcctacaaaattagtgaatgaaatttgacca-tgagtatatgctta 25391568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 634
Target Start/End: Complemental strand, 15441904 - 15441832
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtga 634  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||| |||||||| | ||||| ||||| ||||    
T  15441904 cataattatgaatttcttaaa-caattcataattaatttgtgtctcatttaaaaaatccaaaatttcatggtga 15441832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 2e-39; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 563 - 726
Target Start/End: Complemental strand, 34948499 - 34948337
Alignment:
Q  563 taattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgctt 662  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| | ||||||||  ||||| |    
T  34948499 taattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcct 34948401  T
Q  663 ataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  34948400 acaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 34948337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 28997177 - 28997341
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| || |||| ||||||| ||||||||  |||||    
T  28997177 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgc 28997275  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  28997276 ctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 28997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 33229056 - 33228891
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||  |||||    
T  33229056 cataattatgaatttcttaaactaatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgc 33228957  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     |  || |||||||||| |||||||||  |||||| ||| |||||  |||||||||||||||||||    
T  33228956 ctgcaaaattagggaactaaatttgacttgtgagtgtacacttacgcggaacaaaatttcaatttt 33228891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 399066 - 399231
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  399066 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 399164  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  399165 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 29743731 - 29743896
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| ||||||  || ||||||||||||||| ||||||||||||||| ||||| |||||||||||  ||||||| |||||| || |||||    
T  29743731 cataattatgaatttcttaaactaacttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttcttatcatgttccaatcatgc 29743830  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||  |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  29743831 ctacaaaattagggaattaaatttgacttgtgagtatacacttacgcggaacaaaatttcaatttt 29743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 555 - 778
Target Start/End: Original strand, 28931450 - 28931671
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaa 654  Q
    |||| ||||||||||||||| | ||||  |||| ||||||||||| | ||| ||||||||||| ||||| | |||  |||||||| |||| |  ||||||    
T  28931450 atttcccataattatgaatttcgtaaat-aattcataattaatttttatcttgtttaaaaacttcaaaattgcatgttgaagattgttatgaccttctaa 28931548  T
Q  655 ccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaata 754  Q
    |||||| || || ||||| ||||||||||||||| || |||||||||||||  ||||||||||| ||| ||| |||| |||| |||  ||||| ||||||    
T  28931549 ccatgcctacaaaattagagaacgaaatttgacccgtaagtatacgcttacacggaacaaaattgcaa-tttcgcacattttggttcaaaaattaaaata 28931647  T
Q  755 aattgaatcgtcattgaagtgcta 778  Q
    ||| |||  ||| ||||| |||||    
T  28931648 aatcgaaatgtctttgaaatgcta 28931671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 561 - 758
Target Start/End: Original strand, 13838245 - 13838443
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    ||||||||||||||  ||||| ||||||||||||||||||| | ||||||||||| | ||||| |||||||||||| |||||||   |||| |  ||||     
T  13838245 cataattatgaatttattaaa-caatttataattaatttgtatatcgtttaaaaattacaaaatttcattgtgaaggttcttatctagttccagtcatgt 13838343  T
Q  661 ttataagattagggaacgaaatttgacca---gtgagtatacgcttactaggaacaaaatttcaatttttgcacctttttgttttaaaataaaaataaat 757  Q
     || || |||||||||| ||||| || ||   ||||||||||||||||  ||||||||||||||| |||||||| |||| |||  ||||| |||||||||    
T  13838344 ctacaaaattagggaactaaattcgatcacttgtgagtatacgcttacgcggaacaaaatttcaa-ttttgcacgttttagttgaaaaatcaaaataaat 13838442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 10231747 - 10231911
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||| |||||||||| || |||| ||||||| || ||||| ||||| |||||| |||||||  |||||||||||||    
T  10231747 ccataattatgaatttcttaaa-caattaataattaattcgtatctcatttaaaatcttcaaaatttcatggtgaaggttcttatgttgttctaaccatg 10231845  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || |||||  |||||||||||||  |||| |||| | |||||  |||||||||| ||||||    
T  10231846 cctagaaaattagaaaacgaaatttgactcgtgaatatatgtttactcagaacaaaattgcaattt 10231911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 638 - 758
Target Start/End: Original strand, 23217452 - 23217570
Alignment:
Q  638 ttcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttttgcaccttttt 737  Q
    ||||||||||||||||||||||| || || |||| ||||||||||||||||   ||||||||  |||||||||||||||||||||||||| || | ||||    
T  23217452 ttcttattatgttctaaccatgcctacaaaattaaggaacgaaatttgacctaagagtatacaattactaggaacaaaatttcaattttt-ca-cgtttt 23217549  T
Q  738 gttttaaaataaaaataaatt 758  Q
    | || ||||||||||||||||    
T  23217550 ggttaaaaataaaaataaatt 23217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 555 - 718
Target Start/End: Complemental strand, 31373409 - 31373247
Alignment:
Q  555 attttccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaa 654  Q
    |||| ||| ||||||||||| |||||| ||||| ||||||||||  || |||||||||||||| ||||| ||  |||||||| ||||||| ||||| |||    
T  31373409 atttcccaaaattatgaatttcttaaa-caattcataattaattcatcactcgtttaaaaacttcaaaattttgttgtgaaggttcttatgatgttttaa 31373311  T
Q  655 ccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatt 718  Q
    || ||| || || ||||||||||  ||||||| | || |||||| || |||| | |||||||||    
T  31373310 ccttgcctacaaaattagggaactgaatttgatccgttagtatatgcctactcgaaacaaaatt 31373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 613
Target Start/End: Original strand, 18339541 - 18339592
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaa 613  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  18339541 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaa 18339592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 560 - 715
Target Start/End: Original strand, 12098436 - 12098590
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| ||||||  |||| |||||||||||||| | | ||||||||||  |||| ||||| || ||| || || | |||||| |||||||    
T  12098436 ccataattatgaatttcttaaat-aattcataattaatttgtcccgcatttaaaaactttaaaatttcatggtaaaggtttttttgatgttcaaaccatg 12098534  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaa 715  Q
      || || |  |||||| ||||||||| |  |||||||| ||||||| ||||||||    
T  12098535 tctaaaaaacaagggaatgaaatttgatccttgagtatatgcttactcggaacaaa 12098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 560 - 715
Target Start/End: Complemental strand, 12850101 - 12849947
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||| ||||||||||| || | | ||||||||||  |||| ||||| || ||| ||||| | |||||| |||||||    
T  12850101 ccataattatgaatttcttaaa-caattcataattaatttatcccgcatttaaaaactctaaaatttcatggtaaaggttcttttgatgttcaaaccatg 12850003  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaa 715  Q
    | || || |  ||||||  |||||||| | |||| ||||  |||||| ||||||||    
T  12850002 cctaaaaaagaagggaataaaatttgatccgtgaatatatacttactcggaacaaa 12849947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 650
Target Start/End: Original strand, 4335252 - 4335318
Alignment:
Q  584 aatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgtt 650  Q
    |||| ||||||||||| ||||||||||||||||| ||||| || || |||||| || |||| |||||    
T  4335252 aattgataattaatttatctctcgtttaaaaactacaaaatttaatggtgaagtttattatgatgtt 4335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Complemental strand, 480175 - 480010
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaa-gattcttattatgttctaaccatg 659  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||| ||||||||  ||||    
T  480175 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatg 480077  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||||||||| |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  480076 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 480010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 561 - 726
Target Start/End: Original strand, 53354 - 53518
Alignment:
Q  561 cataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgc 660  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||| ||||||| ||| ||||  |||||    
T  53354 cataattatgaatttcttaaa-caatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgc 53452  T
Q  661 ttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
     || || |||||||||| |||||||||  |||||||||| |||||  |||||||||||||||||||    
T  53453 ctacaaaattagggaactaaatttgacttgtgagtatacacttacgcggaacaaaatttcaatttt 53518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 560 - 726
Target Start/End: Original strand, 17754 - 17918
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    |||||| |||||||| ||| || |||||||||| ||||||||||||| ||||||||| |||||| |||||||||||| ||| ||||||||||||||||||    
T  17754 ccataagtatgaatttctttaa-caatttataagtaatttgtctctc-tttaaaaacagcaaaatttcattgtgaaggttcatattatgttctaaccatg 17851  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    | || || |||| ||||||| |||||| |  | |||||||  |||||||||||||||||||||||||    
T  17852 cctacaaaattaaggaacgacatttgatctattagtatacaattactaggaacaaaatttcaatttt 17918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 580 - 726
Target Start/End: Original strand, 18025 - 18172
Alignment:
Q  580 aaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagatt-cttattatgttctaaccatgcttataagattagggaacg 678  Q
    |||||||||||||||||||||| | ||||||||||  | ||||| |||||||||||| || ||||| ||||||||  |||||||| || ||||||||||     
T  18025 aaacaatttataattaatttgtatatcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatgcttacaaaattagggaact 18124  T
Q  679 aaatttgaccagtgagtatacgcttactaggaacaaaatttcaatttt 726  Q
    |||||||||  ||||||||||||||||  |||||||||||||||||||    
T  18125 aaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttt 18172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 560 - 725
Target Start/End: Original strand, 8467 - 8631
Alignment:
Q  560 ccataattatgaattacttaaaacaatttataattaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatg 659  Q
    ||||||||||||||| |||||| ||||| |||||||||| || |||| ||||||| || ||||| ||||| |||||| |||||||  |||||||||||||    
T  8467 ccataattatgaatttcttaaa-caattaataattaattcgtatctcatttaaaatcttcaaaatttcatggtgaaggttcttatgttgttctaaccatg 8565  T
Q  660 cttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaatttcaattt 725  Q
    | || || |||||  |||||||||||||  |||| |||| | |||||  |||||||||| ||||||    
T  8566 cctagaaaattagaaaacgaaatttgactcgtgaatatatgtttactcagaacaaaattgcaattt 8631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 592 - 666
Target Start/End: Original strand, 35277 - 35351
Alignment:
Q  592 attaatttgtctctcgtttaaaaactgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataa 666  Q
    |||||||||  ||||||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||| |||||    
T  35277 attaatttgcatctcgtttaaaaactccaaaatttcatggtgaaggttcttataatgttctaaccatgcctataa 35351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 760
Target Start/End: Original strand, 3383 - 3521
Alignment:
Q  620 aaaacttcattgtgaagattcttattatgttctaaccatgcttataagattagggaacgaaatttgaccagtgagtatacgcttactaggaacaaaattt 719  Q
    |||| ||||| ||||| |||||||  || |||||||||||| || || ||| |||||| | |||||| | ||||||||| | ||| | |||||||||||     
T  3383 aaaaattcatggtgaaaattcttac-atattctaaccatgcctacaaaattggggaacaacatttgatccgtgagtatatggttagtcggaacaaaattg 3481  T
Q  720 caatttttgcacctttttgttttaaaataaaaataaattga 760  Q
    ||| |||||||| ||||||||  |||||||||| |||||||    
T  3482 caa-ttttgcacatttttgttgaaaaataaaaacaaattga 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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