View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4716_low_13 (Length: 317)
Name: NF4716_low_13
Description: NF4716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4716_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 7 - 303
Target Start/End: Original strand, 21879455 - 21879751
Alignment:
| Q |
7 |
aaaaagacggtatgtgtcattctcttaacattctaaactattcaaattaccaaaatttcagtaccgattcagatttaaattattctctctaaatgcagac |
106 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21879455 |
aaaaagacggtatgtgtcattctcttaacattctaaattattcaaattaccaaaatttcagtaccgattcagatttaaattattctctctaaatgcagac |
21879554 |
T |
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| Q |
107 |
ttggatgtaccttgtagttccactagtgctctatggtattgagagagttcatccattttataagagtaaagatcaccgcgtgaacgtcattaaggtatgt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21879555 |
ttggatgtaccttgtagttccactagtgctctatggtattgagagagttcatccattttataagagtaaagatcaccgcgtgaacgtcattaaggtatgt |
21879654 |
T |
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| Q |
207 |
gtgtgtgtcaacaaattctcctccttgaatttttagttatgccgaaacaggaaaataatattactatttgaatatttcaggcaataatctacacagg |
303 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21879655 |
gtgtgtgtcaacaaattctcctccttgaatttttatttatgccgaaacaggaaaataatattactatttgaatatttcaggcaataatctacacagg |
21879751 |
T |
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