View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4716_low_18 (Length: 253)

Name: NF4716_low_18
Description: NF4716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4716_low_18
NF4716_low_18
[»] chr2 (6 HSPs)
chr2 (42-246)||(6880622-6880827)
chr2 (59-246)||(6875106-6875294)
chr2 (156-227)||(6880592-6880662)
chr2 (167-253)||(6875050-6875135)
chr2 (186-246)||(6875008-6875067)
chr2 (150-206)||(6874998-6875054)
[»] chr3 (11 HSPs)
chr3 (42-252)||(13921105-13921316)
chr3 (157-252)||(15047286-15047381)
chr3 (42-144)||(16216329-16216431)
chr3 (156-253)||(15047235-15047332)
chr3 (179-253)||(13921193-13921267)
chr3 (157-253)||(15047336-15047429)
chr3 (156-242)||(15047135-15047221)
chr3 (177-228)||(15047403-15047454)
chr3 (70-144)||(20905970-20906044)
chr3 (157-253)||(15047186-15047282)
chr3 (204-253)||(13921467-13921516)
[»] chr5 (4 HSPs)
chr5 (42-243)||(24186438-24186640)
chr5 (104-253)||(28710522-28710673)
chr5 (179-253)||(24186526-24186600)
chr5 (157-206)||(28710519-28710568)
[»] chr8 (4 HSPs)
chr8 (42-250)||(31215745-31215955)
chr8 (205-250)||(31214379-31214424)
chr8 (167-223)||(31214356-31214412)
chr8 (179-253)||(31215792-31215865)
[»] chr4 (23 HSPs)
chr4 (42-253)||(31594946-31595157)
chr4 (156-253)||(20717351-20717448)
chr4 (167-247)||(20717307-20717387)
chr4 (157-253)||(31589671-31589767)
chr4 (157-253)||(31597369-31597465)
chr4 (156-253)||(31595160-31595258)
chr4 (156-251)||(31589720-31589814)
chr4 (157-253)||(20717401-20717497)
chr4 (186-253)||(31589498-31589565)
chr4 (157-253)||(31595111-31595207)
chr4 (88-253)||(20717451-20717616)
chr4 (157-230)||(31589519-31589592)
chr4 (45-137)||(31595360-31595451)
chr4 (190-253)||(31597352-31597415)
chr4 (157-237)||(31595211-31595292)
chr4 (42-137)||(22910994-22911088)
chr4 (42-137)||(22967434-22967528)
chr4 (157-227)||(31595506-31595576)
chr4 (196-253)||(31595495-31595552)
chr4 (179-227)||(22911194-22911242)
chr4 (179-227)||(22967280-22967328)
chr4 (167-214)||(20717288-20717337)
chr4 (179-228)||(31589841-31589890)
[»] chr7 (9 HSPs)
chr7 (167-253)||(11916974-11917057)
chr7 (42-253)||(11917071-11917276)
chr7 (167-253)||(21505297-21505383)
chr7 (167-253)||(11917021-11917107)
chr7 (167-224)||(11916953-11917010)
chr7 (167-253)||(21505249-21505333)
chr7 (167-249)||(34424602-34424684)
chr7 (168-252)||(21505200-21505284)
chr7 (183-227)||(10058402-10058446)
[»] chr6 (1 HSPs)
chr6 (42-145)||(26278801-26278903)
[»] chr1 (1 HSPs)
chr1 (84-145)||(22049660-22049721)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 6880827 - 6880622
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    ||||||||||  ||| |||| |||| |||||||| ||| |||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||| | ||    
T  6880827 cttatatattcaaaagcacaccatcatcatatttaaatcacaaatttaatatgaaaacaacacaattcagaaacgaaaatcaaacatataattacggcaa 6880728  T
Q  142 catagaggaacacga-tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaa 240  Q
    |||| | ||||| || ||||||||  |||||||||||||||||||||||| | |||  ||||||| ||||||||||||||||||||||||||||||||||    
T  6880727 catataagaacatgaatttaacaaagattcatcaaaagtaattacaacaatacaaataaacatgaatttaacaaagattcatcaaaagtaattataacaa 6880628  T
Q  241 cataaa 246  Q
    ||||||    
T  6880627 cataaa 6880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 6875294 - 6875106
Alignment:
Q  59 acaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaacatagaggaacacga-t 157  Q
    |||||||| |||||||| ||| |||||||||||||||||  ||||||||||| |||| |||||||||||||||||| | | |||||||| ||||| || |    
T  6875294 acaacatcatcatatttaaatcacaaatttaacatgaaaccaacacaattcagaaacgaaaatcaaacatataattgcggcaacatagaagaacatgagt 6875195  T
Q  158 ttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaa 246  Q
    |||||||  |||||| |||  |||||||||||||| ||| ||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  6875194 ttaacaaagattcataaaatataattacaacaacacaaaggaatatgaatttagcaaagattcatcaaaagtaattataacaacataaa 6875106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 6880662 - 6880592
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaa 227  Q
    |||||||||  |||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||||    
T  6880662 atttaacaaagattcatcaaaagtaattataacaacataaat-aacatgattttaacaatgattcatcaaaa 6880592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 6875135 - 6875050
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| | |||||||||||| || |  |||||||| |||| |||||    
T  6875135 attcatcaaaagtaattataacaacataaat-aacatgattttaactaggattcatcaaaaatagtcgtaacaacacaaaataacat 6875050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 6875067 - 6875008
Alignment:
Q  186 aacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaa 246  Q
    ||||||| |||| |||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  6875067 aacaacacaaaataacatgattt-aacaaggatttatcaaaagtaattataacaacataaa 6875008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 6875054 - 6874998
Alignment:
Q  150 aacacgatttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgat 206  Q
    |||| ||||||||||  ||| |||||||||||||| |||||||||||  ||||||||    
T  6875054 aacatgatttaacaaggatttatcaaaagtaattataacaacataaagtaacatgat 6874998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 42 - 252
Target Start/End: Original strand, 13921105 - 13921316
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    |||||||||| |||| ||||||||| |||||||| ||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||   ||    
T  13921105 cttatatattccaaagcacaacatcgtcatatttaaatcacaaatttaacattaaaacaacacaattcagaaacaaaaatcaaacatataattacgacaa 13921204  T
Q  142 catagaggaacacg-atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaa 240  Q
    ||||   ||||| | |||||||||  | |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||| |||||    
T  13921205 catattagaacatgaatttaacaaagactcatcaaaagtaattacaacaacataaaagaacatagatttaacaaatattcatcaaaagtaattacaacaa 13921304  T
Q  241 cataaaagaaca 252  Q
     |||||| ||||    
T  13921305 tataaaataaca 13921316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 15047286 - 15047381
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaaca 252  Q
    ||||||||  |||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  15047286 tttaacaatgattcataaaaagtaattataacaacataaaagaacatgattttaacaagcattcatcaaaagtaattataacgacataaaagaaca 15047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 16216329 - 16216431
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    ||||| |||| |||| ||||||||  |||||||||||| || ||||||||||||||| | ||||||||  |||| |||||||||||||||||||||||||    
T  16216329 cttatgtattgcaaagcacaacataatcatatttcaatgacgaatttaacatgaaaacatcacaattctgaaacgaaaatcaaacatataattacagtaa 16216428  T
Q  142 cat 144  Q
    |||    
T  16216429 cat 16216431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 15047235 - 15047332
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||| ||| || |||| ||||| |||| ||| | |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15047235 atttaaaaacgatccatctaaagttattataaccatataaaacaacatgattttaacaatgattcataaaaagtaattataacaacataaaagaacat 15047332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 13921193 - 13921267
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||| ||||||||  ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  13921193 taattacgacaacatattagaacatgaatttaacaaagactcatcaaaagtaattacaacaacataaaagaacat 13921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 15047336 - 15047429
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  |||||||||||||||||| ||| |||||||||||||  |||||||||| ||||||||   |||| ||||||||||||||||||||||    
T  15047336 tttaacaagcattcatcaaaagtaattataacgacataaaagaacacaattttaacaaggattcatc---agtagttataacaacataaaagaacat 15047429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 15047135 - 15047221
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaaca 242  Q
    |||||| || || |||| |||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||| |||||||    
T  15047135 atttaataaaaaatcataaaaaataattacaaccacataaaagatcatgagtttaacaaagattcatcaaaagtatttacaacaaca 15047221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 15047403 - 15047454
Alignment:
Q  177 agtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaag 228  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15047403 agtagttataacaacataaaagaacatgattttaacaaggattcatcaaaag 15047454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 20905970 - 20906044
Alignment:
Q  70 atatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaacat 144  Q
    |||||||||| || |||||||| |||||| | ||||||||| ||||  ||||||||||||||||||  |||||||    
T  20905970 atatttcaataaccaatttaacctgaaaacatcacaattcaaaaacggaaatcaaacatataattattgtaacat 20906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 15047186 - 15047282
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  |||||||||||||| ||||||||||| ||| ||| || | ||||| || ||| |||| ||||| |||||||| | |||||| |||||    
T  15047186 tttaacaaagattcatcaaaagtatttacaacaacacaaaggaaaattaatttaaaaacgatccatctaaagttattataaccatataaaacaacat 15047282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 13921467 - 13921516
Alignment:
Q  204 gattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  ||||||| ||| |||||||||||||||||||||| |||||    
T  13921467 gattttaatgaagattcctcacaagtaattataacaacataaaaaaacat 13921516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 24186438 - 24186640
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    |||||||||| ||||  |||||||| |||||||| ||| || ||||||||||||||| || | |||||| |||| |||||||||||||||||||| | ||    
T  24186438 cttatatattccaaagaacaacatcatcatatttaaatcacgaatttaacatgaaaacaatataattcagaaacgaaaatcaaacatataattacggcaa 24186537  T
Q  142 catagaggaacacga-tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaa 240  Q
    |||| | ||||| || ||||||||  ||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  24186538 catataagaacatgaatttaacaaagattcatcgaaaataattacaacaacataaatgaacatgattttaacaaagattcatccaaattaattataacaa 24186637  T
Q  241 cat 243  Q
    |||    
T  24186638 cat 24186640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 28710673 - 28710522
Alignment:
Q  104 caattcataaacaaaaatcaaacatataattacagtaacatagaggaacacgattt-aacaacaattcatcaaaa-gtaattacaacaacataaaagaac 201  Q
    ||||||| |||| |||||||||||||||||||||  |||||| | ||| | || || |||||  ||||||||||| ||||||| |||||||||||| |||    
T  28710673 caattcagaaacgaaaatcaaacatataattacaacaacatataagaaaatgaattcaacaaagattcatcaaaaagtaattataacaacataaaataac 28710574  T
Q  202 atgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28710573 atgattttaacaaagattcatcaaaagtaactataacaacataaaagaacat 28710522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 24186526 - 24186600
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||  ||||||| |||||||||| ||||||||||||||||| ||| |||||| ||||||||||| ||||||    
T  24186526 taattacggcaacatataagaacatgaatttaacaaagattcatcgaaaataattacaacaacataaatgaacat 24186600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 28710568 - 28710519
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgat 206  Q
    ||||||||  ||||||||||||||| || |||||||||||||||||||||    
T  28710568 tttaacaaagattcatcaaaagtaactataacaacataaaagaacatgat 28710519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 250
Target Start/End: Complemental strand, 31215955 - 31215745
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaaca--tataattacagt 139  Q
    |||||||||| || | ||||||||| |||||||| ||| || ||||||||||||||| ||||||||||| ||||||||||||||||  |||||||||       
T  31215955 cttatatattccacatcacaacatcatcatatttaaatcacgaatttaacatgaaaacaacacaattcagaaacaaaaatcaaacatatataattacgac 31215856  T
Q  140 aacatagaggaacacg-atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataac 238  Q
     ||||| | ||||| | |||||||||  |||||| |||| |||||||||||||||| | |||||| | ||||||||||||||||| |||||| |||  ||    
T  31215855 tacatataagaacatgaatttaacaaagattcat-aaaaataattacaacaacatagatgaacataaatttaacaaagattcatcgaaagtagttacgac 31215757  T
Q  239 aacataaaagaa 250  Q
    || |||||||||    
T  31215756 aaaataaaagaa 31215745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 31214424 - 31214379
Alignment:
Q  205 attttaacaaagattcatcaaaagtaattataacaacataaaagaa 250  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31214424 attttaactaagattcatcaaaagtaattataacaacataaaagaa 31214379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31214412 - 31214356
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatc 223  Q
    |||||||||||||||||| ||||||||||||||| || | |||||| ||||||||||    
T  31214412 attcatcaaaagtaattataacaacataaaagaatataaatttaaccaagattcatc 31214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 31215865 - 31215792
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||| || ||||| |||||||||| |||||||||||||||| |||| |||||| ||||||||| | ||||||    
T  31215865 taattacgactacatataagaacatgaatttaacaaagattcat-aaaaataattacaacaacatagatgaacat 31215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 253
Target Start/End: Original strand, 31594946 - 31595157
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    |||||||||| |||| ||||||||| |||||||| ||| |  |||||||||| |||| ||||||||||| |||| ||||| |||||||||||||||  ||    
T  31594946 cttatatattccaaagcacaacatcatcatatttaaatcatgaatttaacattaaaacaacacaattca-aaactaaaattaaacatataattacaacaa 31595044  T
Q  142 catagaggaacacga-tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaa 240  Q
     ||| | ||||| || ||||||||  | |||  |||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||| |||||    
T  31595045 gatataagaacatgaatttaacaaagaatcacaaaaaataattacaaccacataaaagatcatgagtttaacaaagattcatcaaaagtatttacaacaa 31595144  T
Q  241 cataaaagaacat 253  Q
     | ||| ||||||    
T  31595145 tacaaaggaacat 31595157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 20717448 - 20717351
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||||  |||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  20717448 atttaacaaggattcatcaaaagtaattataacaacataaaataacatgattttaaaaaggattcatcaaaagtaattataacaacataaaataacat 20717351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 20717387 - 20717307
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaa 247  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  20717387 attcatcaaaagtaattataacaacataaaataacatgattttaagaaggattcatcaaaagtaattataacaacataaaa 20717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 31589671 - 31589767
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||| | ||||||||||||||| ||||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31589671 tttaacgaaaattcatcaaaagtatttacaacaacacaaagaaacatgaatttaacaaggattcatcaaaagtaattataacaacataaaagaacat 31589767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 31597369 - 31597465
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  ||||||||||| |||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  31597369 tttaacaaggattcatcaaaattaattataacaacataaaataacatgattttaataaagatttatcaaaagtaattataacaagataaaagaacat 31597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 31595160 - 31595258
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatc-aaaagtaattataacaacataaaagaacat 253  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  31595160 atttaacaaaaattcatcaaaagtaattataacagcataaaataacatgattttaacaaaaattcatcaaaaaatagttataacaacataaaagaacat 31595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 31589720 - 31589814
Alignment:
Q  156 atttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaac 251  Q
    |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||| || ||||||||||    
T  31589720 atttaacaaggattcatcaaaagtaattataacaacataaaagaacatgattttaacaaggatt-atcaaaagtagttataagaatataaaagaac 31589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 20717497 - 20717401
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  ||||||||||| |  ||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  20717497 tttaacaaagattcatcaaaaatgtttacaacaacacaaaggaacatgaatttaacaaggattcatcaaaagtaattataacaacataaaataacat 20717401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 31589498 - 31589565
Alignment:
Q  186 aacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  31589498 aacaacataaaagaacatgtttttaacaatgattcgtcaaaagtaattataacaacataaaagaacat 31589565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 31595111 - 31595207
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||||  |||||||||||||| ||||||||| | ||| |||||| | ||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  31595111 tttaacaaagattcatcaaaagtatttacaacaatacaaaggaacataaatttaacaaaaattcatcaaaagtaattataacagcataaaataacat 31595207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 20717616 - 20717451
Alignment:
Q  88 taacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaacatagaggaacacg-atttaacaacaattcatcaaaagtaattaca 186  Q
    |||||| |||||| ||||||||| |||| |||||||||||||||| ||||  |||||| | ||||| | |||||||||  | |||| |||| ||||||||    
T  20717616 taacattaaaataccacaattca-aaactaaaatcaaacatataactacaacaacatataagaacatgtatttaacaaagaatcataaaaaataattaca 20717518  T
Q  187 acaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    || || |||||||  |||| ||||||||||||||||||||| |  ||| ||||||| ||| ||||||    
T  20717517 accacgtaaaagatgatgagtttaacaaagattcatcaaaaatgtttacaacaacacaaaggaacat 20717451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 31589519 - 31589592
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagta 230  Q
    ||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  31589519 tttaacaatgattcgtcaaaagtaattataacaacataaaagaacatgattttaacaagaattcatcaaaagta 31589592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 31595360 - 31595451
Alignment:
Q  45 atatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattaca 137  Q
    ||||||| |||||||||||||| |||||||| ||| || |||||| ||| |||| ||||||||||| |||| |||||||||||||||||||||    
T  31595360 atatattacaaaacacaacatcatcatatttaaatcacgaatttatcattaaaacaacacaattca-aaactaaaatcaaacatataattaca 31595451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 31597352 - 31597415
Alignment:
Q  190 acataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  31597352 acataaaataacatgattttaacaaggattcatcaaaattaattataacaacataaaataacat 31597415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 31595211 - 31595292
Alignment:
Q  157 tttaacaacaattcatcaaaag-taattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataa 237  Q
    |||||||| ||||||||||||  || ||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  31595211 tttaacaaaaattcatcaaaaaatagttataacaacataaaagaacatgtttttaacaaagaatcgtcaaaagtaattataa 31595292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 22911088 - 22910994
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattaca 137  Q
    |||||||||| |||| ||||||| | |||||||| ||| |  |||||||||| |||| |||| |||||| |||  |||||||||||||||||||||    
T  22911088 cttatatattccaaagcacaacaacatcatatttaaatcatgaatttaacattaaaacaacataattca-aaattaaaatcaaacatataattaca 22910994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 22967434 - 22967528
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattaca 137  Q
    |||||||||| |||| ||||||| | |||||||| ||| |  |||||||||| |||| |||| |||||| |||  |||||||||||||||||||||    
T  22967434 cttatatattccaaagcacaacaacatcatatttaaatcatgaatttaacattaaaacaacataattca-aaattaaaatcaaacatataattaca 22967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 31595506 - 31595576
Alignment:
Q  157 tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaa 227  Q
    ||||||||  ||| |||||||||| ||| |||| ||||||| ||||| |||||||||| ||||||||||||    
T  31595506 tttaacaaagatttatcaaaagtatttataacaccataaaataacataattttaacaaggattcatcaaaa 31595576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 31595495 - 31595552
Alignment:
Q  196 aagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||| ||||| ||||||||||||| |||||||||| |||||||| ||||||| |||||    
T  31595495 aagatcatgagtttaacaaagatttatcaaaagtatttataacaccataaaataacat 31595552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 22911242 - 22911194
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaa 227  Q
    |||||||||||||||| |||||||||  |||||||||||||||| ||||    
T  22911242 taattacaacaacatataagaacatggatttaacaaagattcattaaaa 22911194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 22967280 - 22967328
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaa 227  Q
    |||||||||||||||| |||||||||  |||||||||||||||| ||||    
T  22967280 taattacaacaacatataagaacatggatttaacaaagattcattaaaa 22967328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 20717337 - 20717288
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaa--catgattttaacaa 214  Q
    |||||||||||||||||| |||||||||||| ||  ||||||||||||||    
T  20717337 attcatcaaaagtaattataacaacataaaaaaaaacatgattttaacaa 20717288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 31589841 - 31589890
Alignment:
Q  179 taattacaacaacataaaagaacatgattttaacaaagattcatcaaaag 228  Q
    |||||| || ||||||||||||||||||||||||||   |||||||||||    
T  31589841 taattataataacataaaagaacatgattttaacaagagttcatcaaaag 31589890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 11917057 - 11916974
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||||||||||||  ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  11917057 attcatcaaaagtaattgtaacaacataaaagaacatgattttaa---agattcatcaaaagtaattataacaacataaaagaacat 11916974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 253
Target Start/End: Complemental strand, 11917276 - 11917071
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    |||||||||| |||| || |||||| |||||||| ||| |  ||||||||||||||| |       ||| |||  ||||||||||||||| |||| | ||    
T  11917276 cttatatattccaaagcagaacatcatcatatttaaatcatgaatttaacatgaaaaca-------tcagaaaagaaaatcaaacatatagttacggaaa 11917184  T
Q  142 catagaggaacacga-tttaacaacaattcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaa 240  Q
    |||| | |||||| | ||||||||  |||||| |||||||||||| ||||||||||||||||| | ||||| ||| ||||||| ||| ||||||||||||    
T  11917183 catataagaacacaaatttaacaaagattcatgaaaagtaattacgacaacataaaagaacataaatttaataaatattcatcgaaaataattataacaa 11917084  T
Q  241 cataaaagaacat 253  Q
    ||||||| |||||    
T  11917083 cataaaataacat 11917071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 21505297 - 21505383
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    |||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  21505297 attcatcaaaagtaattataataacataaaataacatgattttaataaagattcatcaaaagtacttataacaacataaaataacat 21505383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 11917107 - 11917021
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||| ||| |||||| |||||||||||| ||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  11917107 attcatcgaaaataattataacaacataaaataacataattctaacaaacattcatcaaaagtaattgtaacaacataaaagaacat 11917021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 11917010 - 11916953
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatca 224  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  11917010 attcatcaaaagtaattataacaacataaaagaacatgaatttaacaaagattcatca 11916953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 21505249 - 21505333
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaacat 253  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||| |  |||||||||||||||||||||| ||||||||| |||||    
T  21505249 attcatcgaaagtaattacaacaacatacaagaacaatattttaata--gattcatcaaaagtaattataataacataaaataacat 21505333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 34424602 - 34424684
Alignment:
Q  167 attcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaaga 249  Q
    ||||| |||||||| ||  |||||| || |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  34424602 attcaacaaaagtagttgtaacaacttagaagaacatgaatttaacaaagatttatcaaaagtagttataacaacataaaaga 34424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 21505200 - 21505284
Alignment:
Q  168 ttcatcaaaagtaattacaacaacataaaagaacatgattttaacaaagattcatcaaaagtaattataacaacataaaagaaca 252  Q
    ||||||||||||| ||||||| ||||||| |||||| | || |||||| ||||||| |||||||||| ||||||||| |||||||    
T  21505200 ttcatcaaaagtagttacaactacataaaggaacataaattcaacaaacattcatcgaaagtaattacaacaacatacaagaaca 21505284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 10058402 - 10058446
Alignment:
Q  183 tacaacaacataaaagaacatgattttaacaaagattcatcaaaa 227  Q
    ||||||||||||||||||||||| ||| ||||||| || ||||||    
T  10058402 tacaacaacataaaagaacatgaatttgacaaagaatcgtcaaaa 10058446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 26278801 - 26278903
Alignment:
Q  42 cttatatatttcaaaacacaacatcttcatatttcaattacaaatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaa 141  Q
    |||||||||| |||||||||||||   ||||||||||| |  || |||| || |||| | ||||||||| ||||||||||||||||||||||||||| ||    
T  26278801 cttatatatt-caaaacacaacataaccatatttcaatcatgaaattaaaataaaaacatcacaattcaaaaacaaaaatcaaacatataattacagcaa 26278899  T
Q  142 cata 145  Q
    ||||    
T  26278900 cata 26278903  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 22049660 - 22049721
Alignment:
Q  84 aatttaacatgaaaataacacaattcataaacaaaaatcaaacatataattacagtaacata 145  Q
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T  22049660 aatttaacatgaaatcatcacaattaataaacaaaaattcaacatataattacagcaacata 22049721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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