View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4717-Insertion-1 (Length: 1013)

Name: NF4717-Insertion-1
Description: NF4717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4717-Insertion-1
NF4717-Insertion-1
[»] chr3 (53 HSPs)
chr3 (8-324)||(48369757-48370070)
chr3 (445-763)||(48370207-48370526)
chr3 (795-1013)||(35437051-35437268)
chr3 (793-1013)||(36164855-36165074)
chr3 (760-1013)||(16496173-16496416)
chr3 (798-1009)||(54792723-54792932)
chr3 (811-1013)||(12157753-12157953)
chr3 (892-1013)||(11383395-11383516)
chr3 (465-532)||(47714720-47714787)
chr3 (463-525)||(17642563-17642625)
chr3 (916-986)||(26035994-26036063)
chr3 (756-865)||(22759055-22759154)
chr3 (465-525)||(2420644-2420704)
chr3 (467-530)||(47434368-47434431)
chr3 (756-909)||(26035812-26035954)
chr3 (755-792)||(26100775-26100812)
chr3 (756-792)||(18688681-18688717)
chr3 (465-532)||(38526119-38526187)
chr3 (465-532)||(46312468-46312536)
chr3 (757-792)||(4137399-4137434)
chr3 (757-792)||(5240995-5241030)
chr3 (757-792)||(8396773-8396808)
chr3 (757-792)||(21165930-21165965)
chr3 (757-792)||(22477913-22477948)
chr3 (757-792)||(26776433-26776468)
chr3 (757-792)||(35861009-35861044)
chr3 (757-792)||(41053811-41053846)
chr3 (758-792)||(188743-188777)
chr3 (916-986)||(15315450-15315519)
chr3 (758-792)||(22522278-22522312)
chr3 (465-530)||(55439552-55439618)
chr3 (448-532)||(31178276-31178361)
chr3 (448-525)||(44412185-44412262)
chr3 (793-865)||(30766449-30766521)
chr3 (465-532)||(39499164-39499232)
chr3 (760-792)||(42614239-42614271)
chr3 (465-532)||(45555599-45555667)
chr3 (465-532)||(49683048-49683116)
chr3 (757-792)||(11950990-11951025)
chr3 (465-515)||(15499346-15499397)
chr3 (465-523)||(38515225-38515284)
chr3 (471-525)||(39966911-39966966)
chr3 (757-788)||(50742307-50742338)
chr3 (757-788)||(54934745-54934776)
chr3 (758-788)||(5252254-5252284)
chr3 (465-515)||(7435662-7435712)
chr3 (465-530)||(24242139-24242205)
chr3 (758-792)||(30766513-30766547)
chr3 (758-792)||(39576541-39576575)
chr3 (758-792)||(52843192-52843226)
chr3 (132-218)||(53435487-53435571)
chr3 (757-786)||(31368326-31368355)
chr3 (466-530)||(33982767-33982832)
[»] scaffold0088 (1 HSPs)
scaffold0088 (757-1013)||(52692-52939)
[»] chr8 (40 HSPs)
chr8 (757-1013)||(39445049-39445296)
chr8 (757-1013)||(12249911-12250158)
chr8 (757-1013)||(23626055-23626303)
chr8 (757-1013)||(41907806-41908052)
chr8 (794-1013)||(39204659-39204879)
chr8 (758-1013)||(29434067-29434314)
chr8 (757-909)||(2961008-2961148)
chr8 (916-985)||(2961194-2961262)
chr8 (757-865)||(27272629-27272728)
chr8 (755-792)||(36778487-36778524)
chr8 (756-792)||(4631639-4631675)
chr8 (756-792)||(7391329-7391365)
chr8 (756-792)||(18375556-18375592)
chr8 (756-792)||(41158651-41158687)
chr8 (757-792)||(2680235-2680270)
chr8 (810-865)||(4634830-4634885)
chr8 (465-531)||(25033347-25033414)
chr8 (757-792)||(32569576-32569611)
chr8 (758-792)||(28940714-28940748)
chr8 (758-792)||(40586443-40586477)
chr8 (496-529)||(6839861-6839894)
chr8 (465-532)||(36102937-36103005)
chr8 (757-793)||(36597311-36597347)
chr8 (757-788)||(6300488-6300519)
chr8 (757-792)||(8160419-8160454)
chr8 (757-792)||(8763020-8763055)
chr8 (465-524)||(13865139-13865198)
chr8 (757-792)||(24055848-24055883)
chr8 (757-788)||(27273889-27273920)
chr8 (757-788)||(37029926-37029957)
chr8 (757-788)||(42060661-42060692)
chr8 (758-792)||(1945195-1945229)
chr8 (448-521)||(2474796-2474870)
chr8 (758-792)||(11697117-11697151)
chr8 (758-788)||(23966383-23966413)
chr8 (758-792)||(27244398-27244432)
chr8 (758-788)||(44940529-44940559)
chr8 (448-516)||(10589786-10589855)
chr8 (485-522)||(26773017-26773054)
chr8 (448-532)||(37659561-37659646)
[»] chr1 (49 HSPs)
chr1 (757-1013)||(28631604-28631853)
chr1 (757-1013)||(28565429-28565674)
chr1 (796-1013)||(12714769-12714984)
chr1 (760-1013)||(13662121-13662364)
chr1 (793-964)||(15317492-15317661)
chr1 (757-865)||(23909715-23909815)
chr1 (465-532)||(51246610-51246678)
chr1 (462-525)||(30538793-30538857)
chr1 (465-532)||(1688264-1688331)
chr1 (799-857)||(1954373-1954431)
chr1 (793-857)||(34265902-34265966)
chr1 (756-792)||(47137866-47137902)
chr1 (757-792)||(3929747-3929782)
chr1 (757-792)||(4893975-4894010)
chr1 (757-792)||(10763595-10763630)
chr1 (757-792)||(29693395-29693430)
chr1 (757-792)||(29840689-29840724)
chr1 (757-792)||(38896822-38896857)
chr1 (757-792)||(42682599-42682634)
chr1 (749-788)||(44407305-44407344)
chr1 (757-792)||(48183175-48183210)
chr1 (757-792)||(52037390-52037425)
chr1 (754-792)||(20767563-20767601)
chr1 (463-532)||(27499950-27500020)
chr1 (465-531)||(45565097-45565163)
chr1 (465-532)||(23871510-23871578)
chr1 (465-532)||(26757202-26757270)
chr1 (465-532)||(33991507-33991575)
chr1 (465-532)||(39889705-39889773)
chr1 (756-788)||(50394965-50394997)
chr1 (757-792)||(1375989-1376024)
chr1 (465-532)||(2175297-2175363)
chr1 (466-532)||(13255310-13255377)
chr1 (465-520)||(14153090-14153145)
chr1 (757-792)||(19320420-19320455)
chr1 (757-792)||(22194467-22194502)
chr1 (757-792)||(24289200-24289235)
chr1 (757-792)||(28573167-28573202)
chr1 (757-792)||(29184477-29184512)
chr1 (757-792)||(33074231-33074266)
chr1 (794-849)||(43118896-43118951)
chr1 (757-788)||(45005717-45005748)
chr1 (465-515)||(17416764-17416814)
chr1 (758-788)||(24294880-24294910)
chr1 (758-788)||(31620610-31620640)
chr1 (758-792)||(33363579-33363613)
chr1 (448-525)||(42162083-42162161)
chr1 (758-788)||(43254555-43254585)
chr1 (465-525)||(47206470-47206531)
[»] chr4 (53 HSPs)
chr4 (755-1013)||(26870026-26870275)
chr4 (793-1013)||(3839121-3839351)
chr4 (757-909)||(15650485-15650625)
chr4 (916-985)||(15650671-15650739)
chr4 (916-996)||(1944740-1944819)
chr4 (465-530)||(38365997-38366062)
chr4 (793-865)||(23992346-23992418)
chr4 (465-525)||(52594671-52594732)
chr4 (756-792)||(2118198-2118234)
chr4 (756-792)||(5759349-5759385)
chr4 (465-524)||(13269927-13269987)
chr4 (460-524)||(21730367-21730431)
chr4 (465-532)||(38317276-38317344)
chr4 (465-532)||(41844401-41844469)
chr4 (465-532)||(56504515-56504583)
chr4 (757-792)||(27892643-27892678)
chr4 (794-865)||(28120212-28120283)
chr4 (757-792)||(35707657-35707692)
chr4 (757-792)||(39404591-39404626)
chr4 (445-531)||(49404650-49404737)
chr4 (758-792)||(574177-574211)
chr4 (812-909)||(1944866-1944960)
chr4 (758-860)||(1975342-1975435)
chr4 (758-792)||(3759287-3759321)
chr4 (758-792)||(5483041-5483075)
chr4 (758-792)||(12680630-12680664)
chr4 (754-792)||(16653202-16653240)
chr4 (465-530)||(20533895-20533961)
chr4 (758-792)||(39713496-39713530)
chr4 (758-792)||(43014591-43014625)
chr4 (795-865)||(49711652-49711722)
chr4 (448-532)||(904163-904248)
chr4 (755-788)||(5271599-5271632)
chr4 (465-525)||(31529992-31530053)
chr4 (465-532)||(17622518-17622586)
chr4 (757-792)||(1944963-1944998)
chr4 (757-788)||(2777233-2777264)
chr4 (757-792)||(8964841-8964876)
chr4 (757-792)||(9887270-9887305)
chr4 (465-532)||(13270321-13270388)
chr4 (757-788)||(15521080-15521111)
chr4 (757-788)||(19591092-19591123)
chr4 (757-788)||(21353975-21354006)
chr4 (757-788)||(28974021-28974052)
chr4 (757-792)||(29713831-29713866)
chr4 (757-792)||(30527587-30527622)
chr4 (757-788)||(41983531-41983562)
chr4 (757-792)||(51348074-51348109)
chr4 (758-792)||(8532231-8532265)
chr4 (758-788)||(14828803-14828833)
chr4 (758-792)||(16895957-16895991)
chr4 (467-532)||(37756762-37756828)
chr4 (758-792)||(56541773-56541807)
[»] chr7 (43 HSPs)
chr7 (757-1013)||(42996736-42996983)
chr7 (757-1013)||(38434277-38434525)
chr7 (757-1013)||(9226020-9226266)
chr7 (811-996)||(42244625-42244813)
chr7 (795-865)||(45121973-45122043)
chr7 (793-865)||(42298834-42298906)
chr7 (916-986)||(34130540-34130609)
chr7 (465-522)||(42220014-42220072)
chr7 (446-524)||(46449149-46449227)
chr7 (756-792)||(31896812-31896848)
chr7 (756-792)||(39647980-39648016)
chr7 (757-792)||(691296-691331)
chr7 (757-792)||(12960614-12960649)
chr7 (757-792)||(17817726-17817761)
chr7 (757-792)||(21669231-21669266)
chr7 (757-792)||(39278245-39278280)
chr7 (465-532)||(42620399-42620466)
chr7 (795-865)||(8998447-8998517)
chr7 (758-792)||(15595432-15595466)
chr7 (757-791)||(49023321-49023355)
chr7 (755-848)||(1484767-1484851)
chr7 (755-792)||(19049238-19049275)
chr7 (755-792)||(27840521-27840558)
chr7 (448-532)||(28437572-28437657)
chr7 (934-1013)||(4481283-4481362)
chr7 (760-792)||(9151426-9151458)
chr7 (924-984)||(19124060-19124119)
chr7 (756-792)||(24682276-24682312)
chr7 (756-792)||(27732951-27732987)
chr7 (757-792)||(272590-272625)
chr7 (469-516)||(374618-374665)
chr7 (793-848)||(1483698-1483753)
chr7 (757-792)||(11834956-11834991)
chr7 (926-996)||(19123053-19123121)
chr7 (757-792)||(21597943-21597978)
chr7 (465-525)||(44720061-44720123)
chr7 (757-788)||(47573332-47573363)
chr7 (465-530)||(3571806-3571872)
chr7 (758-792)||(4850460-4850494)
chr7 (758-788)||(6911359-6911389)
chr7 (758-792)||(17172901-17172935)
chr7 (758-792)||(23476587-23476621)
chr7 (793-865)||(23476613-23476686)
[»] chr5 (51 HSPs)
chr5 (756-1013)||(9702502-9702752)
chr5 (796-1013)||(3209950-3210169)
chr5 (806-1013)||(290726-290933)
chr5 (793-909)||(12763103-12763217)
chr5 (758-909)||(12702061-12702201)
chr5 (756-901)||(7863527-7863659)
chr5 (757-901)||(9809820-9809953)
chr5 (916-986)||(9810002-9810071)
chr5 (916-986)||(12702243-12702312)
chr5 (756-860)||(38041489-38041585)
chr5 (916-986)||(12763258-12763328)
chr5 (916-986)||(7863710-7863779)
chr5 (791-865)||(19365888-19365962)
chr5 (485-526)||(15739502-15739543)
chr5 (793-865)||(32977128-32977200)
chr5 (465-532)||(37508438-37508506)
chr5 (757-792)||(1685047-1685082)
chr5 (793-860)||(2366866-2366933)
chr5 (757-792)||(5620643-5620678)
chr5 (757-792)||(13596926-13596961)
chr5 (757-792)||(22602634-22602669)
chr5 (448-530)||(25026890-25026973)
chr5 (757-792)||(34719465-34719500)
chr5 (757-792)||(36366124-36366159)
chr5 (758-792)||(3086433-3086467)
chr5 (758-792)||(23920291-23920325)
chr5 (758-792)||(25695539-25695573)
chr5 (758-792)||(42819330-42819364)
chr5 (756-789)||(4802094-4802127)
chr5 (760-792)||(14387898-14387930)
chr5 (756-865)||(18037228-18037329)
chr5 (465-532)||(35701026-35701094)
chr5 (756-792)||(43136272-43136308)
chr5 (757-792)||(752055-752090)
chr5 (757-788)||(4883082-4883113)
chr5 (757-788)||(17997471-17997502)
chr5 (757-788)||(20350836-20350867)
chr5 (757-792)||(32977101-32977136)
chr5 (757-788)||(33931125-33931156)
chr5 (757-788)||(34373668-34373699)
chr5 (757-792)||(36884780-36884815)
chr5 (758-788)||(19395665-19395695)
chr5 (758-788)||(31295552-31295582)
chr5 (758-788)||(34725259-34725289)
chr5 (465-530)||(38928749-38928815)
chr5 (758-792)||(41693149-41693183)
chr5 (448-516)||(6491166-6491235)
chr5 (449-510)||(19389849-19389910)
chr5 (755-784)||(22917414-22917443)
chr5 (465-522)||(41638331-41638388)
chr5 (465-525)||(41694950-41695011)
[»] chr2 (49 HSPs)
chr2 (793-1013)||(17092096-17092317)
chr2 (793-1013)||(17025911-17026132)
chr2 (793-1013)||(16884043-16884263)
chr2 (793-1013)||(17041733-17041953)
chr2 (795-1013)||(14753429-14753645)
chr2 (916-996)||(10821153-10821232)
chr2 (465-525)||(38023493-38023553)
chr2 (757-865)||(1691426-1691526)
chr2 (465-533)||(8991010-8991079)
chr2 (465-525)||(38293862-38293922)
chr2 (465-532)||(13765986-13766053)
chr2 (758-860)||(25124044-25124137)
chr2 (463-532)||(25960655-25960725)
chr2 (469-532)||(725921-725986)
chr2 (756-792)||(9542628-9542664)
chr2 (793-909)||(10820999-10821113)
chr2 (465-532)||(32243441-32243509)
chr2 (757-792)||(4289027-4289062)
chr2 (757-792)||(7364787-7364822)
chr2 (810-865)||(24278996-24279051)
chr2 (758-792)||(45003662-45003696)
chr2 (465-525)||(18018643-18018704)
chr2 (465-525)||(36567325-36567386)
chr2 (465-525)||(3119898-3119958)
chr2 (465-521)||(9618444-9618500)
chr2 (756-792)||(19484615-19484651)
chr2 (463-526)||(44020326-44020390)
chr2 (465-516)||(3737273-3737324)
chr2 (757-788)||(5253306-5253337)
chr2 (757-788)||(6342728-6342759)
chr2 (448-515)||(9087495-9087562)
chr2 (757-792)||(15084297-15084332)
chr2 (465-524)||(19382852-19382911)
chr2 (757-788)||(26828471-26828502)
chr2 (757-792)||(28609960-28609995)
chr2 (448-515)||(30523230-30523297)
chr2 (757-792)||(30922097-30922132)
chr2 (757-788)||(33908203-33908234)
chr2 (757-788)||(35285583-35285614)
chr2 (757-788)||(37224026-37224057)
chr2 (757-792)||(42782681-42782716)
chr2 (758-788)||(1992950-1992980)
chr2 (758-792)||(9916707-9916741)
chr2 (758-788)||(11707585-11707615)
chr2 (448-525)||(30312435-30312513)
chr2 (465-525)||(4041937-4041998)
chr2 (469-533)||(14008379-14008443)
chr2 (344-377)||(29880895-29880928)
chr2 (465-525)||(40357430-40357491)
[»] scaffold0051 (2 HSPs)
scaffold0051 (758-1013)||(61509-61754)
scaffold0051 (757-792)||(55567-55602)
[»] chr6 (34 HSPs)
chr6 (755-1013)||(1932135-1932384)
chr6 (757-996)||(4425722-4425950)
chr6 (793-901)||(8614994-8615098)
chr6 (916-986)||(8614873-8614942)
chr6 (465-531)||(4909962-4910029)
chr6 (757-867)||(33318993-33319091)
chr6 (916-986)||(33318825-33318894)
chr6 (756-792)||(1363230-1363266)
chr6 (793-849)||(22975744-22975800)
chr6 (793-849)||(23812601-23812657)
chr6 (757-792)||(875538-875573)
chr6 (757-792)||(6966236-6966271)
chr6 (757-792)||(11681669-11681704)
chr6 (757-792)||(18389167-18389202)
chr6 (757-792)||(18985191-18985226)
chr6 (757-792)||(24447802-24447837)
chr6 (758-792)||(4110068-4110102)
chr6 (916-986)||(5753288-5753357)
chr6 (754-792)||(9978704-9978742)
chr6 (755-793)||(29737643-29737681)
chr6 (811-860)||(3052050-3052099)
chr6 (755-788)||(13456732-13456765)
chr6 (756-792)||(2624720-2624756)
chr6 (468-515)||(8439420-8439468)
chr6 (756-788)||(22323798-22323830)
chr6 (756-792)||(33300675-33300711)
chr6 (757-788)||(2522035-2522066)
chr6 (757-792)||(5753126-5753161)
chr6 (793-857)||(5753153-5753213)
chr6 (757-792)||(15043827-15043862)
chr6 (465-532)||(34914593-34914660)
chr6 (757-792)||(35160130-35160165)
chr6 (758-788)||(33814888-33814918)
chr6 (793-865)||(33979127-33979200)
[»] scaffold0006 (4 HSPs)
scaffold0006 (760-1013)||(151883-152126)
scaffold0006 (916-996)||(64581-64660)
scaffold0006 (812-909)||(64440-64534)
scaffold0006 (757-792)||(64402-64437)
[»] scaffold0440 (1 HSPs)
scaffold0440 (795-865)||(8342-8412)
[»] scaffold0376 (2 HSPs)
scaffold0376 (793-909)||(10810-10922)
scaffold0376 (926-986)||(10981-11040)
[»] scaffold0249 (2 HSPs)
scaffold0249 (757-867)||(24918-25018)
scaffold0249 (916-986)||(25108-25177)
[»] scaffold0499 (1 HSPs)
scaffold0499 (795-865)||(10674-10744)
[»] scaffold0103 (1 HSPs)
scaffold0103 (757-849)||(12982-13065)
[»] scaffold0057 (1 HSPs)
scaffold0057 (756-792)||(17399-17435)
[»] scaffold0484 (1 HSPs)
scaffold0484 (757-792)||(8175-8210)
[»] scaffold0073 (1 HSPs)
scaffold0073 (795-854)||(33416-33475)
[»] scaffold0069 (1 HSPs)
scaffold0069 (757-792)||(14655-14690)
[»] scaffold0028 (1 HSPs)
scaffold0028 (465-531)||(35502-35568)
[»] scaffold0175 (1 HSPs)
scaffold0175 (791-840)||(27030-27079)
[»] scaffold0004 (1 HSPs)
scaffold0004 (796-860)||(81034-81099)
[»] scaffold0171 (1 HSPs)
scaffold0171 (756-788)||(29637-29669)
[»] scaffold0381 (1 HSPs)
scaffold0381 (757-792)||(11239-11274)
[»] scaffold0027 (1 HSPs)
scaffold0027 (757-792)||(143213-143248)
[»] scaffold0047 (1 HSPs)
scaffold0047 (758-788)||(25614-25644)
[»] scaffold0005 (1 HSPs)
scaffold0005 (758-788)||(10876-10906)
[»] scaffold0001 (1 HSPs)
scaffold0001 (759-792)||(12962-12995)


Alignment Details
Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 48369757 - 48370070
Alignment:
Q  8 attgaattattttttatgttgttttggcggaggtaagcaaggctaagtatgttgtacactattattaatatatacattgcttataggttatatagatttt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48369757 attgaattattttttatgttgttttggcggaggtaagcaaggctaagtgtgttgtacactattattaatatatacattgcttataggttatatagatttt 48369856  T
Q  108 cacgtgctttatatcaagtgaacactaactagttgctacctccacttcaagtgtcaattatatatagacttatcggttataatcgtggttatagcacaaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48369857 cacgtgctttatatcaagtgaacactaactagttgctacctccacttcaagtgtcaattatatatcgacttatcggttataatcgtggttatagcacaaa 48369956  T
Q  208 taacaacatatatatgttttc-aaatggcgcactttggcttggttggagtattgtggtgcttgatgcctatctgcagcaatgcgcatgcaataattccac 306  Q
    |||||    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48369957 taaca----aaatatgttttcaaaatggcgcactttggcttggttggagtattgtggtgcttgatgcctatctgcagcaatgcgcatgcaataattccac 48370052  T
Q  307 caatgttgattaaaaaat 324  Q
    ||||||||||||||||||    
T  48370053 caatgttgattaaaaaat 48370070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 445 - 763
Target Start/End: Original strand, 48370207 - 48370526
Alignment:
Q  445 cctcccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagccaaaatcctcccc 544  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  48370207 cctcccaaaatccttctccgatacaatttttgagttccccaaatgagtgagattttatattatgaataaaaaattaacctcaaaagtcaaaatccacccc 48370306  T
Q  545 cctcatcccttccaaactttcaaacaaaggtttaatgacaatatttgtggttaatttttaaattaacnnnnnnnnnnnngttctaagtttgagcccaaga 644  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||            |||| ||||||||||||||||    
T  48370307 cctcatcccttccaaactctcaaacaaagctttaatgacaatatttatggttaattgttaaattaacttttttttttttgttc-aagtttgagcccaaga 48370405  T
Q  645 c---cattaattcccttccaaaatcctccccactcatttaagagattaccataaatcgtataacccaatgctgagtggctgacacagtgaagcaccactt 741  Q
    |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48370406 caattattaattcccttccaaaatcctccccactcatttaagagattaccataaatcgtataacccaatgctgagtggctgacacagtaaagcaccactt 48370505  T
Q  742 acccttatttactttaactagt 763  Q
    | ||||||||||||||||||||    
T  48370506 a-ccttatttactttaactagt 48370526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 795 - 1013
Target Start/End: Complemental strand, 35437268 - 35437051
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttat 894  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| | ||||| ||| | |||||     
T  35437268 gttgaataacgtatattgtaaaaaatttgttccaaagaaaaaatgagcaaattaatgaatattgcacaaact-cggatattctaaataaatcatttttac 35437170  T
Q  895 tgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaat 994  Q
    | |||||||||||||||||  ||||||| | ||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||||| |||||||    
T  35437169 tatatttttaaaaaactttgttataaaggaaaaatgagcaaattaagggaaatagc-tgcatctttctaagaaattgttgtcgttcataaatgtgaaaat 35437071  T
Q  995 caggc-agcatattgcacaa 1013  Q
    || || ||||||||||||||    
T  35437070 caagcaagcatattgcacaa 35437051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 793 - 1013
Target Start/End: Original strand, 36164855 - 36165074
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| |||||||||| |||||| |||||||||||||  |||||||| ||||||||| |||||| ||||  | ||||| ||| ||||||    
T  36164855 gggttgaataacgtatcttgtaaaaaaattgttctaaagaaaaaatgagtaaattaattaatattgcacaaactc-ggattttttaaataaatcactttt 36164953  T
Q  893 attgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaa 992  Q
    | | |||||||||||||||||  ||||||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||||    
T  36164954 actatatttttaaaaaactttgttataaaggagaaatgagcaaattaagggaaatagc-tgcatctttctaaaaaattgttgtcgttcataaatgtgaaa 36165052  T
Q  993 atcaggc-agcatattgcacaa 1013  Q
    || | || ||||||||||||||    
T  36165053 attaagcaagcatattgcacaa 36165074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 760 - 1013
Target Start/End: Complemental strand, 16496416 - 16496173
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattg 858  Q
    |||||||||||||||||||||||||||||||||         ||||||| ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  16496416 tagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaaaattattccaaaggaaaaatgatcaaattaatgaatattg 16496326  T
Q  859 cataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcattt 958  Q
     | |||||| ||||| | ||||  ||| ||||||| || | ||||||||||||||  ||||||| ||||||||||||||||||||||| | | |||||||    
T  16496325 tacaaactc-ggatattctaaaa-aatcacttttactgaaattttaaaaaactttgttataaaggagaaatgagcaaattaagggaaaaagc-tgcattt 16496229  T
Q  959 ttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    || ||  ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  16496228 ttttatgaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 16496173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 798 - 1009
Target Start/End: Original strand, 54792723 - 54792932
Alignment:
Q  798 gaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgt 897  Q
    ||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||| | |||||| | ||||  ||| ||||||| |||    
T  54792723 gaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatattgcacaaa-ttcggatattctaaa-aaatcacttttaatgt 54792820  T
Q  898 atttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatcag 997  Q
    | ||||||||||||||  ||||||  ||||||||||||||||||||||| | | ||||||||| ||  ||||||||||||||||||||| |||||||||     
T  54792821 aattttaaaaaactttgttataaaagagaaatgagcaaattaagggaaaaagc-tgcatttttttatgaaattgttgtcgttcataaatgtgaaaatcaa 54792919  T
Q  998 gc-agcatattgc 1009  Q
    || ||||||||||    
T  54792920 gcaagcatattgc 54792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 811 - 1013
Target Start/End: Original strand, 12157753 - 12157953
Alignment:
Q  811 tgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgtatttttaaaaaac 910  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||||||  |||||   |||| | ||||| ||| ||||||| | |||||||||||||     
T  12157753 tgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatattgctcaaact-atgatattctaaataaatcacttttactatatttttaaaaaa- 12157850  T
Q  911 ttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgc 1009  Q
    |||  ||||||| ||||||||||||||||| ||||||| | ||||| ||||||| ||||||||||||||| ||||| ||||||||| || | ||||||||    
T  12157851 tttgttataaaggagaaatgagcaaattaaaggaaataac-tgcatctttctaagaaattgttgtcgttcctaaatgtgaaaatcaagcaaacatattgc 12157949  T
Q  1010 acaa 1013  Q
    ||||    
T  12157950 acaa 12157953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 892 - 1013
Target Start/End: Complemental strand, 11383516 - 11383395
Alignment:
Q  892 tattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaa 991  Q
    |||||||||||| |||| ||||  ||||||| ||||||||||||||||||||||||| | ||||  | ||||| ||||||||||| ||||||||| ||||    
T  11383516 tattgtatttttgaaaatctttgttataaaggagaaatgagcaaattaagggaaataac-tgcacctctctaagaaattgttgtccttcataaatgtgaa 11383418  T
Q  992 aatcaggc-agcatattgcacaa 1013  Q
    ||||| || ||||||||||||||    
T  11383417 aatcaagcaagcatattgcacaa 11383395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 47714720 - 47714787
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||| ||||||||||||||| ||||||    
T  47714720 atacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagcc 47714787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 463 - 525
Target Start/End: Complemental strand, 17642625 - 17642563
Alignment:
Q  463 cgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||||| |||||||||  ||||||| |||||||| |||||||||||||||    
T  17642625 cgatacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaattaacctc 17642563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 26035994 - 26036063
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||||| ||||||||||||    
T  26035994 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcctaagaaattgttttcgttcataaat 26036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 756 - 865
Target Start/End: Original strand, 22759055 - 22759154
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||| |||||| | |||||||| |||||    
T  22759055 taactagttacaaacccgtgcttcgcacgggttgaag---------aacatattttgtaaaaaaattgtttcaaaggaaaaat-agcaaattaaggaata 22759144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 2420704 - 2420644
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||| |||||||||||||||    
T  2420704 atacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaattaacctc 2420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 47434368 - 47434431
Alignment:
Q  467 acaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||| ||||||||||  |||||| |||||||||||||||| ||||||| ||||    
T  47434368 acaatttttgagttccccaaatgagatggattttttattatgaataaaaaactaacctccaaag 47434431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 756 - 909
Target Start/End: Original strand, 26035812 - 26035954
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    ||||||||||||||||||||| ||||||         |||||||||||  ||| |||||||| |||| || |||| ||||||||  ||||||||| ||||    
T  26035812 taactagttacaaacccgtgcgtcgcac---------gggttgaataatgtatcttgtaaaatattt-tttcaaaaaaaaaatgtgcaaattaataaata 26035901  T
Q  856 ttgcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    ||||| ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  26035902 ttgcacaaact-cggatattctaaataaatcacttttactgtattttaaaaaaa 26035954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 755 - 792
Target Start/End: Original strand, 26100775 - 26100812
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26100775 ttaactagttacaaacccgtgcttcgcacgggttgaat 26100812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 18688717 - 18688681
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  18688717 taactagttacaaacccgtgcttcgcacgggttgaat 18688681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 38526187 - 38526119
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||  |||||||||||||| ||||||    
T  38526187 atacaatttttgagttcccccaaatgagggagattttatattatgagaaaaaaattaacctccaaagcc 38526119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 46312468 - 46312536
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || ||||||| ||||||||  ||||||| ||||||||||||||| ||||||    
T  46312468 atacaatttttgagttcccccaaatgaggaagatttttcattatgagtaaaaaattaacctccaaagcc 46312536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 4137399 - 4137434
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaat 4137434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 5241030 - 5240995
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  5241030 aactagttacaaacccgtgcttcgcacgggttgaat 5240995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 8396808 - 8396773
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  8396808 aactagttacaaacccgtgcttcgcacgggttgaat 8396773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 21165930 - 21165965
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaat 21165965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 22477948 - 22477913
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  22477948 aactagttacaaacccgtgcttcgcacgggttgaat 22477913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 26776433 - 26776468
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  26776433 aactagttacaaacccgtgcttcgcacgggttgaat 26776468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 35861044 - 35861009
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaat 35861009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 41053846 - 41053811
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  41053846 aactagttacaaacccgtgcttcgcacgggttgaat 41053811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 188777 - 188743
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  188777 actagttacaaacccgtgcttcgcacgggttgaat 188743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 15315450 - 15315519
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    |||||||||||| ||||||||| ||| |||||| || ||||||| |||| |||||| ||||||||||||||    
T  15315450 tataaagaagaactgagcaaataaagagaaatagct-gcattttcctaagaaattgctgtcgttcataaat 15315519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 22522312 - 22522278
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaat 22522278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 465 - 530
Target Start/End: Complemental strand, 55439618 - 55439552
Alignment:
Q  465 atacaatttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| ||||||||||   |||||| |||||||| ||||||||||||||| ||||    
T  55439618 atacaatttttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 55439552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 31178276 - 31178361
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||| |||||  | ||||||||||| |||||||| |||||||  ||||||| ||||||||  |||||||||||||| ||||||    
T  31178276 cccaaaacccttccccaatacaatttttaagttctcccaaatgagggagattttttattatgagcaaaaaattaacctccaaagcc 31178361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 525
Target Start/End: Original strand, 44412185 - 44412262
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||| ||| | || ||||||||||||||||| | |||||||   |||||| |||||||| |||||||||||||||    
T  44412185 cccaaaaccctccctcaatacaatttttgagttcccaaaatgagggggattttttattatgagtaaaaaattaacctc 44412262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 793 - 865
Target Start/End: Complemental strand, 30766521 - 30766449
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||| ||| |||||||| | ||||||||||| |||||| |  ||||||| ||||||| |||||||    
T  30766521 gggttgaataacgtatcttgtaaaacaattgttccaaaggaaaaataagtaaattaaggaatattacataaac 30766449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 39499232 - 39499164
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||  || |||||||  ||||||| |||||||| ||||||||||||||| ||||||    
T  39499232 atacaatttttgagtttccctaaatgagggagattttttattatgagtaaaaaattaacctccaaagcc 39499164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 760 - 792
Target Start/End: Original strand, 42614239 - 42614271
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||    
T  42614239 tagttacaaacccgtgcttcgcacgggttgaat 42614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 45555667 - 45555599
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  45555667 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 45555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 49683048 - 49683116
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  49683048 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 49683116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 11950990 - 11951025
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||| |||||||||||||||||||    
T  11950990 aactagttacaaacccatgcttcgcacgggttgaat 11951025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 15499346 - 15499397
Alignment:
Q  465 atacaatttttgagttct-ccaaatgagaaagattttatattatgaataaaa 515  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||| ||||    
T  15499346 atacaatttttgagttctcccaaatgaggaagattttgtattatgaagaaaa 15499397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 38515284 - 38515225
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacc 523  Q
    |||||||||||||||||||| |||||||   |||||| |||||||| |||||||||||||    
T  38515284 atacaatttttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacc 38515225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 525
Target Start/End: Original strand, 39966911 - 39966966
Alignment:
Q  471 tttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||| | |||||||||||||| || || |||||||||||||||||||||    
T  39966911 tttttgagttccttcaaatgagaaagatattgtactatgaataaaaaattaacctc 39966966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 50742338 - 50742307
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  50742338 aactagttacaaacccgtgcttcgcacgggtt 50742307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 54934776 - 54934745
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  54934776 aactagttacaaacccgtgcttcgcacgggtt 54934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 5252254 - 5252284
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  5252254 actagttacaaacccgtgcttcgcacgggtt 5252284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 7435662 - 7435712
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaa 515  Q
    ||||||||||| ||||||||| ||||| | |||||||||||||||| ||||    
T  7435662 atacaattttttagttctccagatgaggaggattttatattatgaagaaaa 7435712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 465 - 530
Target Start/End: Original strand, 24242139 - 24242205
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||    
T  24242139 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 24242205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 30766547 - 30766513
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||| ||||||||||||||||||||    
T  30766547 actagttacaaacctgtgcttcgcacgggttgaat 30766513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 39576575 - 39576541
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||| |||||||    
T  39576575 actagttacaaacccgtgcttcgcacgagttgaat 39576541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 52843226 - 52843192
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||| |||||||    
T  52843226 actagttacaaacccgtgcttcgcacgagttgaat 52843192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 53435571 - 53435487
Alignment:
Q  132 ctaactagttgctacctccacttcaagtgtcaattatatatagacttatcggttataatcgtggttatagcacaaataacaacatat 218  Q
    ||||||||||||||||||||||||| | | || || | |||  | |||||| ||||||| |||||||||||||||| ||||||||||    
T  53435571 ctaactagttgctacctccacttca-gag-cagttgtgtatcaaattatcgtttataattgtggttatagcacaaaaaacaacatat 53435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 757 - 786
Target Start/End: Original strand, 31368326 - 31368355
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacggg 786  Q
    ||||||||||||||||||||||||||||||    
T  31368326 aactagttacaaacccgtgcttcgcacggg 31368355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 530
Target Start/End: Original strand, 33982767 - 33982832
Alignment:
Q  466 tacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    |||||||||| ||||| || ||||||| |||||| | |||||||| ||||||||||||||| ||||    
T  33982767 tacaatttttaagttcccccaaatgaggaagattctttattatgagtaaaaaattaacctccaaag 33982832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 143; Significance: 1e-74; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 52692 - 52939
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  52692 aactagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 52782  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  52783 tgcacaaactc-ggatattataaatgaatcacttttattgtatttttgaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgcat 52880  T
Q  957 ttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||| ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||    
T  52881 ttttcttaagaaaatgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 52939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 1e-74; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 757 - 1013
Target Start/End: Complemental strand, 39445296 - 39445049
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  39445296 aactagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 39445206  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  39445205 tgcacaaactc-ggatattataaatgaatcacttttattgtatttttgaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgcat 39445108  T
Q  957 ttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||| ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||    
T  39445107 ttttcttaagaaaatgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 39445049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 12249911 - 12250158
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  12249911 aactagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 12250001  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  12250002 tgcacaaactc-ggatattataaatgaatcacttttattgtatttttgaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgcat 12250099  T
Q  957 ttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||| ||| ||| ||||||||||||||||  ||||||||| || ||||||||||||||    
T  12250100 ttttcttaagaaaatgttgtcgttcataaacgtgaaaatcaagcaagcatattgcacaa 12250158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 23626055 - 23626303
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  23626055 aactagttacaaacccgtgcttcgcacgggt---------tgaataacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 23626145  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtattttt-aaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgca 955  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  23626146 tgcacaaact-cggatattataaatgaatcacttttattgtatttttaaaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgca 23626243  T
Q  956 tttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    |||||| ||| |||||||||  |||||||||| ||||||||| || ||||||||||||||    
T  23626244 tttttcttaagaaattgttgctgttcataaatgtgaaaatcaagcaagcatattgcacaa 23626303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 757 - 1013
Target Start/End: Complemental strand, 41908052 - 41907806
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         || |||| || |||||||||||||| ||||||||||||| |||||||||||||||    
T  41908052 aactagttacaaacccgtgcttcgcacgggttgaat---------aatatatcttataaaaaatttgttctaaagaaaaaatgagcaaattaatgaatat 41907962  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| ||| ||||| || | ||||| ||| ||||||| |||||||||||||||||||  |  |||| ||||||||||||||||||||||||| | |||||    
T  41907961 tgcacaaa-tccggttattctaaataaatcacttttactgtatttttaaaaaactttgtttcaaaggagaaatgagcaaattaagggaaatagc-tgcat 41907864  T
Q  957 ttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
     ||||||| ||||||||||  ||||||||| | ||||||| || |||||| |||||||    
T  41907863 ctttctaagaaattgttgtttttcataaatgtcaaaatcaagcaagcatactgcacaa 41907806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 794 - 1013
Target Start/End: Complemental strand, 39204879 - 39204659
Alignment:
Q  794 ggttgaataacatattttgtaaaaaatttgttccaaagaaaaaa-tgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    ||||||||||| ||| || ||||||||| ||||||||||||||| |||  |||||||| ||||||||| |||||| ||||| | ||||| ||| ||||||    
T  39204879 ggttgaataacttatcttataaaaaattagttccaaagaaaaaaatgagtaaattaataaatattgcacaaactc-ggatattctaaataaatcactttt 39204781  T
Q  893 attgtatttttaaaaaacttttgt-ataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaa 991  Q
    |||||||||||||||||  ||||| |||||| |||||||| |||||||||| |||||  ||||||||| |||| ||||||||| ||||||||||| ||||    
T  39204780 attgtatttttaaaaaaactttgttataaaggagaaatgaacaaattaaggaaaataa-ttgcattttcctaagaaattgttgccgttcataaatgtgaa 39204682  T
Q  992 aatcaggc-agcatattgcacaa 1013  Q
    ||||| || ||||||||||||||    
T  39204681 aatcaagcaagcatattgcacaa 39204659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 758 - 1013
Target Start/End: Complemental strand, 29434314 - 29434067
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||||||||||||||||||| ||||||||||||         ||| ||| |||||||||| ||||||| ||  |||||||||||||||||| ||||||    
T  29434314 actagttacaaacccgtgcttcacacgggttgaata--------aacgtatcttgtaaaaaaattgttcctaa--aaaaatgaacaaattaataaatatt 29434225  T
Q  858 gcataaactccggataatataaatgaattacttttattgtatttttaa---aaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgc 954  Q
    ||| |||||| | ||| | ||||| ||| ||||||| |||||||| ||   ||||||||  ||||||| ||||||||||||||||||||||||| | |||    
T  29434224 gcacaaactcag-atattctaaataaatcacttttactgtattttaaagaaaaaactttgttataaaggagaaatgagcaaattaagggaaatagc-tgc 29434127  T
Q  955 atttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    || ||||||| |||||| ||| |||||||||||||||||||| || |||||||| |||||    
T  29434126 atctttctaagaaattgatgttgttcataaatatgaaaatcaagcaagcatattacacaa 29434067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 757 - 909
Target Start/End: Original strand, 2961008 - 2961148
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||| ||| |||||||||||||||||  || ||||||||  |||||||||||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggt---------tgaataacgtatcttgtaaaaaatttgttc--aaaaaaaaatgtgcaaattaatgaatat 2961096  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    || | ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  2961097 tgaacaaact-cggatattctaaataaatcacttttactgtattttaaaaaaa 2961148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 916 - 985
Target Start/End: Original strand, 2961194 - 2961262
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaa 985  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  2961194 tataaagaagaaatgagcaaattaagggaaatagc-tgcatttttttaagaaattgttgtcgttcataaa 2961262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 757 - 865
Target Start/End: Complemental strand, 27272728 - 27272629
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||||||         |||| ||| |||||| |||||||||| |||  |||||||| |||||||| ||||||    
T  27272728 aactagttacaaacccgtgcttcgcacgggttgaa---------taacgtatcttgtaataaatttgttctaaacgaaaaatgagcaaattaaagaatat 27272638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 755 - 792
Target Start/End: Complemental strand, 36778524 - 36778487
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36778524 ttaactagttacaaacccgtgcttcgcacgggttgaat 36778487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 4631639 - 4631675
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  4631639 taactagttacaaacccgtgcttcgcacgggttgaat 4631675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 7391365 - 7391329
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  7391365 taactagttacaaacccgtgcttcgcacgggttgaat 7391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 18375556 - 18375592
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  18375556 taactagttacaaacccgtgcttcgcacgggttgaat 18375592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 41158687 - 41158651
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  41158687 taactagttacaaacccgtgcttcgcacgggttgaat 41158651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 2680235 - 2680270
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  2680235 aactagttacaaacccgtgcttcgcacgggttgaat 2680270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 810 - 865
Target Start/End: Original strand, 4634830 - 4634885
Alignment:
Q  810 ttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    ||||||||||  |||||||||| |||||||| ||||||||||||||||||| ||||    
T  4634830 ttgtaaaaaaaatgttccaaaggaaaaatgagcaaattaatgaatattgcacaaac 4634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 465 - 531
Target Start/End: Complemental strand, 25033414 - 25033347
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagc 531  Q
    ||||||||||||||||| || ||||||| | |||||| |||||||| ||||||||||||||| |||||    
T  25033414 atacaatttttgagttcccccaaatgaggatgattttttattatgagtaaaaaattaacctccaaagc 25033347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 32569576 - 32569611
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  32569576 aactagttacaaacccgtgcttcgcacgggttgaat 32569611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 28940714 - 28940748
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  28940714 actagttacaaacccgtgcttcgcacgggttgaat 28940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 40586443 - 40586477
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  40586443 actagttacaaacccgtgcttcgcacgggttgaat 40586477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 529
Target Start/End: Original strand, 6839861 - 6839894
Alignment:
Q  496 attttatattatgaataaaaaattaacctctaaa 529  Q
    ||||||||||||||||||||||||||||||||||    
T  6839861 attttatattatgaataaaaaattaacctctaaa 6839894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 36102937 - 36103005
Alignment:
Q  465 atacaatttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    |||||| |||||||||| ||||||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  36102937 atacaaattttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 36103005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 757 - 793
Target Start/End: Original strand, 36597311 - 36597347
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatg 793  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36597311 aactagttacaaacccgtgcttcgcacgggttcaatg 36597347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 6300488 - 6300519
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  6300488 aactagttacaaacccgtgcttcgcacgggtt 6300519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 8160419 - 8160454
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  8160419 aactagttacaaacccgtgctttgcacgggttgaat 8160454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 8763055 - 8763020
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  8763055 aactagttacaaacccgtgctttgcacgggttgaat 8763020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 524
Target Start/End: Original strand, 13865139 - 13865198
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacct 524  Q
    ||||||||||||||||| |||||| ||   |||||| |||||||| ||||||||||||||    
T  13865139 atacaatttttgagttccccaaataagggggattttttattatgagtaaaaaattaacct 13865198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 24055883 - 24055848
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24055883 aactagttacaaacccgtgcttcgcacaggttgaat 24055848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 27273920 - 27273889
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  27273920 aactagttacaaacccgtgcttcgcacgggtt 27273889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 37029957 - 37029926
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  37029957 aactagttacaaacccgtgcttcgcacgggtt 37029926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 42060661 - 42060692
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  42060661 aactagttacaaacccgtgcttcgcacgggtt 42060692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 1945229 - 1945195
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||| |||||||||||||    
T  1945229 actagttacaaacccgtgctttgcacgggttgaat 1945195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 2474796 - 2474870
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaa 521  Q
    ||||||||||| |  | ||||||||||| |||||||| ||||||| | |||||| |||||||| |||||||||||    
T  2474796 cccaaaatcctcccacaatacaatttttaagttctcccaaatgaggaggattttttattatgagtaaaaaattaa 2474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 11697151 - 11697117
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||| |||||||||||||    
T  11697151 actagttacaaacccgtgctttgcacgggttgaat 11697117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 23966383 - 23966413
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  23966383 actagttacaaacccgtgcttcgcacgggtt 23966413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 27244398 - 27244432
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||| |||||||||||||||||||    
T  27244398 actagttacaaacccatgcttcgcacgggttgaat 27244432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 44940559 - 44940529
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  44940559 actagttacaaacccgtgcttcgcacgggtt 44940529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 448 - 516
Target Start/End: Complemental strand, 10589855 - 10589786
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaa 516  Q
    ||||||||||| || | ||||||||||| |||||| | ||||||||| ||||||||||| |||| |||||    
T  10589855 cccaaaatcctcctccaatacaattttttagttcttctaaatgagaatgattttatattttgaagaaaaa 10589786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 485 - 522
Target Start/End: Complemental strand, 26773054 - 26773017
Alignment:
Q  485 aaatgagaaagattttatattatgaataaaaaattaac 522  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  26773054 aaataagaaagattttgtattatgaataaaaaattaac 26773017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 37659561 - 37659646
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||| |||||  | ||||||||||||||||| || ||||||||  |||||| |||||| | |||||||||||| || ||||||    
T  37659561 cccaaaacccttccccaatacaatttttgagttcccctaaatgagagggattttttattattagtaaaaaattaacatccaaagcc 37659646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 757 - 1013
Target Start/End: Complemental strand, 28631853 - 28631604
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  28631853 aactagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 28631763  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtattttt--aaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgc 954  Q
    |||| ||||| |||||| ||||||||||| | |||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||| |||    
T  28631762 tgcacaaact-cggatattataaatgaatcatttttattgtatttttaaaaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgc 28631665  T
Q  955 atttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  28631664 atttttcttaagaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 28631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 28565429 - 28565674
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  28565429 aactagttacaaacccgtgcttcgcacgggt---------tgaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatat 28565519  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| ||||| |||||| | ||||  ||| ||||||| |||| ||||||||||||||  ||||||| ||||||||||||||||||||||| |   | |||    
T  28565520 tgcacaaact-cggatattctaaa-aaatcacttttactgtaattttaaaaaactttgttataaaggagaaatgagcaaattaagggaaa-aggctacat 28565616  T
Q  957 ttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    |||||||  ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  28565617 ttttctatgaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 28565674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 796 - 1013
Target Start/End: Complemental strand, 12714984 - 12714769
Alignment:
Q  796 ttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttatt 895  Q
    ||||||||| ||| |||||||||  ||||||||||| |||||||| ||||||||||||||||||| ||||| |||||| | ||||  ||| ||||||| |    
T  12714984 ttgaataacgtatcttgtaaaaatattgttccaaaggaaaaatgagcaaattaatgaatattgcacaaact-cggatattttaaa-aaatcacttttact 12714887  T
Q  896 gtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatc 995  Q
    ||| ||||||||||||||  ||||||| ||||||||||||||||||||||| | | ||||||||||||  ||||||||||||||||||||| ||||||||    
T  12714886 gtaattttaaaaaactttgttataaaggagaaatgagcaaattaagggaaaaagc-tgcatttttctatgaaattgttgtcgttcataaatgtgaaaatc 12714788  T
Q  996 aggc-agcatattgcacaa 1013  Q
    | || ||||||||||||||    
T  12714787 aagcaagcatattgcacaa 12714769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 760 - 1013
Target Start/End: Original strand, 13662121 - 13662364
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattg 858  Q
    |||||||||||||||||||||||||||||||||         ||||||| ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  13662121 tagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaaaattattccaaaggaaaaatgatcaaattaatgaatattg 13662211  T
Q  859 cataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcattt 958  Q
     | |||||| ||||| | ||||  ||| ||||||| || | ||||||||||||||  ||||||| ||||||||||||||||||||||| | | |||||||    
T  13662212 tacaaactc-ggatattctaaaa-aatcacttttactgaaattttaaaaaactttgttataaaggagaaatgagcaaattaagggaaaaagc-tgcattt 13662308  T
Q  959 ttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    || ||  ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  13662309 ttttatgaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 13662364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 793 - 964
Target Start/End: Complemental strand, 15317661 - 15317492
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||| || ||| | ||||| ||| | ||||    
T  15317661 gggttgaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatattgcacaaact-cgaatattctaaataaatcaatttt 15317563  T
Q  893 attgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaa 964  Q
      |||||||||||||||||||  ||||||| ||||||||||||||||||| ||||| | |||||||||||||    
T  15317562 gctgtatttttaaaaaactttgttataaaggagaaatgagcaaattaaggaaaatagc-tgcatttttctaa 15317492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 757 - 865
Target Start/End: Original strand, 23909715 - 23909815
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||  ||||| |||||||||||||| |||||||| |||||    
T  23909715 aactagttacaaacccgtgcttcgcacgggttgaag---------aacatattttgtaaaaaaaattgtttcaaagaaaaaatgagcaaattaaggaata 23909805  T
Q  856 ttgcataaac 865  Q
    ||||| ||||    
T  23909806 ttgcacaaac 23909815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 51246610 - 51246678
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  51246610 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctctaaagcc 51246678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 462 - 525
Target Start/End: Original strand, 30538793 - 30538857
Alignment:
Q  462 tcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    |||||||||||||||||||| || |||||||| ||||||| |||||||| |||||||||||||||    
T  30538793 tcgatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctc 30538857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 1688264 - 1688331
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| |||||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  1688264 atacaatttttgagttccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 1688331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 799 - 857
Target Start/End: Original strand, 1954373 - 1954431
Alignment:
Q  799 aataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||| ||| |||||||||| || ||||||||||||||||| ||||||||||||||||    
T  1954373 aataacgtatcttgtaaaaaaattattccaaagaaaaaatgagcaaattaatgaatatt 1954431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 857
Target Start/End: Original strand, 34265902 - 34265966
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||||||| | ||| |||||||||| ||||| |||||||||||||| |||||||| |||||||    
T  34265902 gggttgaatatcgtatattgtaaaaaaattgtttcaaagaaaaaatgagcaaattaaggaatatt 34265966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 47137902 - 47137866
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  47137902 taactagttacaaacccgtgcttcgcacgggttgaat 47137866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 3929747 - 3929782
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  3929747 aactagttacaaacccgtgcttcgcacgggttgaat 3929782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 4894010 - 4893975
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  4894010 aactagttacaaacccgtgcttcgcacgggttgaat 4893975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 10763630 - 10763595
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  10763630 aactagttacaaacccgtgcttcgcacgggttgaat 10763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 29693430 - 29693395
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  29693430 aactagttacaaacccgtgcttcgcacgggttgaat 29693395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 29840689 - 29840724
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaat 29840724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 38896857 - 38896822
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaat 38896822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 42682634 - 42682599
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  42682634 aactagttacaaacccgtgcttcgcacgggttgaat 42682599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 749 - 788
Target Start/End: Complemental strand, 44407344 - 44407305
Alignment:
Q  749 tttactttaactagttacaaacccgtgcttcgcacgggtt 788  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  44407344 tttaatttaactagttacaaacccgtgcttcgcacgggtt 44407305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 48183175 - 48183210
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  48183175 aactagttacaaacccgtgcttcgcacgggttgaat 48183210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 52037390 - 52037425
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  52037390 aactagttacaaacccgtgcttcgcacgggttgaat 52037425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 754 - 792
Target Start/End: Complemental strand, 20767601 - 20767563
Alignment:
Q  754 tttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  20767601 tttaactagttacaaacccgtgcttcgcacggcttgaat 20767563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 27500020 - 27499950
Alignment:
Q  463 cgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  27500020 cgatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 27499950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 465 - 531
Target Start/End: Complemental strand, 45565163 - 45565097
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagc 531  Q
    ||||||||||| |||||  ||||||||  ||||||| |||||||| ||||||||||||||| |||||    
T  45565163 atacaattttttagttcctcaaatgagggagattttttattatgagtaaaaaattaacctccaaagc 45565097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 23871510 - 23871578
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||  ||||||| |||||||| |||||||||||| || ||||||    
T  23871510 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacttccaaagcc 23871578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 26757202 - 26757270
Alignment:
Q  465 atacaatttttgagtt-ctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    |||||||||||||||| | |||||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  26757202 atacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 26757270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 33991575 - 33991507
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  33991575 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 33991507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 39889705 - 39889773
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||| ||  ||||||| |||||||| ||||||||||||||| ||||||    
T  39889705 atacaatttttgagttcccccaaattagggagattttttattatgagtaaaaaattaacctccaaagcc 39889773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 788
Target Start/End: Original strand, 50394965 - 50394997
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||||    
T  50394965 taactagttacaaacccgtgcttcgcacgggtt 50394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 1376024 - 1375989
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  1376024 aactagttacaaacccgtgctttgcacgggttgaat 1375989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 2175363 - 2175297
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| ||| |||||   |||||| |||||||| ||||||||||||||| ||||||    
T  2175363 atacaatttttgagttc-ccagatgagggggattttttattatgagtaaaaaattaacctcgaaagcc 2175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 532
Target Start/End: Complemental strand, 13255377 - 13255310
Alignment:
Q  466 tacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    |||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  13255377 tacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 13255310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 14153145 - 14153090
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaatta 520  Q
    ||||||||||||||||| | |||||||  ||||||| |||||||| ||||||||||    
T  14153145 atacaatttttgagttccctaaatgagggagattttttattatgagtaaaaaatta 14153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 19320420 - 19320455
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  19320420 aactagttacaaacccgtgctttgcacgggttgaat 19320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 22194467 - 22194502
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  22194467 aactagttacaaacccgtgctttgcacgggttgaat 22194502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 24289200 - 24289235
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaat 24289235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 28573202 - 28573167
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  28573202 aactagttacaaacccgtgctttgcacgggttgaat 28573167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 29184477 - 29184512
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29184477 aactagttacaaacccgtgcttcgcacggattgaat 29184512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 33074231 - 33074266
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  33074231 aactagttacaaacccgtgctttgcacgggttgaat 33074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 849
Target Start/End: Complemental strand, 43118951 - 43118896
Alignment:
Q  794 ggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaa 849  Q
    |||||||||||||||||||||||||| || ||| |||| |||||| | ||||||||    
T  43118951 ggttgaataacatattttgtaaaaaaattattctaaaggaaaaataatcaaattaa 43118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 45005748 - 45005717
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  45005748 aactagttacaaacccgtgcttcgcacgggtt 45005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 17416764 - 17416814
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaa 515  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||| ||||    
T  17416764 atacaatttttgagttcccaaaatgaaaaagattttgtattatgaagaaaa 17416814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 24294910 - 24294880
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  24294910 actagttacaaacccgtgcttcgcacgggtt 24294880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 31620640 - 31620610
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggtt 31620610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 33363613 - 33363579
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||| ||||||    
T  33363613 actagttacaaacccgtgcttcgcacggattgaat 33363579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 448 - 525
Target Start/End: Original strand, 42162083 - 42162161
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||| || | | ||||| |||||||||||| |||||||   |||||| |||||||| |||||||||||||||    
T  42162083 cccaaaatcctcctccaacacaatatttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacctc 42162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 43254555 - 43254585
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  43254555 actagttacaaacccgtgcttcgcacgggtt 43254585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 47206470 - 47206531
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| |||||||||||||||    
T  47206470 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc 47206531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 5e-71; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 755 - 1013
Target Start/End: Original strand, 26870026 - 26870275
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaat 854  Q
    |||||||||||||||||||||||| |||||||||||||         ||||||| ||||||||||||||||| |||| |||||||| |||||||||||||    
T  26870026 ttaactagttacaaacccgtgctttgcacgggttgaat---------aacatatcttgtaaaaaatttgttcaaaaggaaaaatgagcaaattaatgaat 26870116  T
Q  855 attgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgc 954  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||    
T  26870117 attgcacaaactc-ggatattataaatgaatcacttttattgtatttttgaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgc 26870214  T
Q  955 atttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||||| ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||    
T  26870215 atttttcttaagaaaatgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 26870275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 793 - 1013
Target Start/End: Original strand, 3839121 - 3839351
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||  ||||| | ||||| ||| ||||||    
T  3839121 gggttgaataacgtatcttgtaaaaaaattgttcctaagaaaaaatgaacaaattaataaatattgcacaaact-tggatattctaaataaatcactttt 3839219  T
Q  893 attgtatttttaaaaa-----------acttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttca 981  Q
    | |||||||| |||||           |||||  ||||||| ||||||||||||||||||||||||| | ||||| ||||||| |||||||||| |||||    
T  3839220 actgtattttaaaaaaaaaaaaaaaacactttgttataaaggagaaatgagcaaattaagggaaatagc-tgcatctttctaagaaattgttgttgttca 3839318  T
Q  982 taaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||| ||||||||| || |||||||| |||||    
T  3839319 taaatgtgaaaatcaagcaagcatattacacaa 3839351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 757 - 909
Target Start/End: Original strand, 15650485 - 15650625
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||| ||| |||||||||||||||||  || ||||||||  |||||||||||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggt---------tgaataacgtatcttgtaaaaaatttgttc--aaaaaaaaatgtgcaaattaatgaatat 15650573  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    || | ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  15650574 tgaacaaact-cggatattctaaataaatcacttttactgtattttaaaaaaa 15650625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 916 - 985
Target Start/End: Original strand, 15650671 - 15650739
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaa 985  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  15650671 tataaagaagaaatgagcaaattaagggaaatagc-tgcatttttttaagaaattgttgtcgttcataaa 15650739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 916 - 996
Target Start/End: Complemental strand, 1944819 - 1944740
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
    ||||||| ||||||||||||||||||| ||||| |  |||||||||||| ||||||||||||||||||||| |||||||||    
T  1944819 tataaaggagaaatgagcaaattaaggcaaatagcc-gcatttttctaagaaattgttgtcgttcataaatgtgaaaatca 1944740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 465 - 530
Target Start/End: Complemental strand, 38366062 - 38365997
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||||| ||||    
T  38366062 atacaatttttgagttccccaaatgagagggattttttattatgagtaaaaaattaacctccaaag 38365997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 865
Target Start/End: Original strand, 23992346 - 23992418
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||| |||  | ||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  23992346 gggttgaataacgtatcgtttaaaaaatttgttccaaaggaaaaatgagcaaattactgaatattgcacaaac 23992418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 52594671 - 52594732
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||| |||||||||||||||    
T  52594671 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctc 52594732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 2118234 - 2118198
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  2118234 taactagttacaaacccgtgcttcgcacgggttgaat 2118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 5759385 - 5759349
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  5759385 taactagttacaaacccgtgcttcgcacgggttgaat 5759349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 524
Target Start/End: Complemental strand, 13269987 - 13269927
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacct 524  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||||||||    
T  13269987 atacaatttttgagttctcccaaatgagggagattttttattatgaagaaaaaattaacct 13269927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 21730367 - 21730431
Alignment:
Q  460 cttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacct 524  Q
    |||| |||||||||||||||||||||||||||  | ||||| |||||| | ||||||||||||||    
T  21730367 cttcaatacaatttttgagttctccaaatgagtgaaattttttattataagtaaaaaattaacct 21730431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 38317276 - 38317344
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || ||||||| | |||||| |||||||| ||||||||||||||| ||||||    
T  38317276 atacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagcc 38317344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 41844469 - 41844401
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||  ||||||| |||||||| ||||||||||||||| ||||||    
T  41844469 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagcc 41844401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 56504515 - 56504583
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||  ||||||| ||||||| |||||||||||||||| ||||||    
T  56504515 atacaatttttgagttcccccaaatgagggagattttgtattatgtataaaaaattaacctccaaagcc 56504583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 27892643 - 27892678
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  27892643 aactagttacaaacccgtgcttcgcacgggttgaat 27892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 794 - 865
Target Start/End: Original strand, 28120212 - 28120283
Alignment:
Q  794 ggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||| |||||| ||| ||| |||||| ||||||||||| ||||||||  |||||||||||||||||| ||||    
T  28120212 ggtttaataacgtatcttgaaaaaaaattgttccaaaggaaaaatgagtaaattaatgaatattgcacaaac 28120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 35707657 - 35707692
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  35707657 aactagttacaaacccgtgcttcgcacgggttgaat 35707692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 39404591 - 39404626
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  39404591 aactagttacaaacccgtgcttcgcacgggttgaat 39404626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 445 - 531
Target Start/End: Original strand, 49404650 - 49404737
Alignment:
Q  445 cctcccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagc 531  Q
    |||||||||| |||||  | |||||| |||||||||| || |||||||| | ||||| |||||||| ||||||||||||||| |||||    
T  49404650 cctcccaaaacccttccccaatacaaattttgagttcccccaaatgagagaaattttttattatgagtaaaaaattaacctccaaagc 49404737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 574177 - 574211
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaat 574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 812 - 909
Target Start/End: Complemental strand, 1944960 - 1944866
Alignment:
Q  812 gtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    ||||||||||||||  ||| |||||  || ||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  1944960 gtaaaaaatttgtttaaaaaaaaaa--gagcaaattaatgaatattgcacaaact-cggatattctaaattaatcacttttactgtattttaaaaaaa 1944866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 860
Target Start/End: Complemental strand, 1975435 - 1975342
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    ||||||||||||||| |||||||||||||||         |||| |||||| ||| |||||| ||||| ||||| |||||||| |||||||| |||||||    
T  1975435 actagttacaaacccatgcttcgcacgggtt---------gaattacatatcttgcaaaaaaattgtttcaaaggaaaaatgagcaaattaaggaatatt 1975345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 3759321 - 3759287
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaat 3759287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 5483075 - 5483041
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  5483075 actagttacaaacccgtgcttcgcacgggttgaat 5483041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 12680630 - 12680664
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaat 12680664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 754 - 792
Target Start/End: Complemental strand, 16653240 - 16653202
Alignment:
Q  754 tttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  16653240 tttaactagttacaaacccgtgctttgcacgggttgaat 16653202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 465 - 530
Target Start/End: Complemental strand, 20533961 - 20533895
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| || |||||||  ||||||| |||||||| ||||||||||||||| ||||    
T  20533961 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaag 20533895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 39713496 - 39713530
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaat 39713530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 43014591 - 43014625
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  43014591 actagttacaaacccgtgcttcgcacgggttgaat 43014625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 795 - 865
Target Start/End: Original strand, 49711652 - 49711722
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||| |||||   |||||||||||||||||| |||||||| |||||||| ||||| |||| ||||    
T  49711652 gttgaataacgtatttcagaaaaaatttgttccaaaggaaaaatgagcaaattaaggaatagtgcacaaac 49711722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 532
Target Start/End: Complemental strand, 904248 - 904163
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||| ||| | || ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  904248 cccaaaaccctccctcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 788
Target Start/End: Original strand, 5271599 - 5271632
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||||    
T  5271599 ttaactagttacaaacccgtgcttcgcacgggtt 5271632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 31530053 - 31529992
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || ||||||| | |||||| |||||||| |||||||||||||||    
T  31530053 atacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctc 31529992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 17622518 - 17622586
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||| ||  ||| |||||||| ||||||||||||||| ||||||    
T  17622518 atacaatttttgagttcccccaaatgagagaggctttttattatgagtaaaaaattaacctccaaagcc 17622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 1944998 - 1944963
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1944998 aactagttataaacccgtgcttcgcacgggttgaat 1944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 2777264 - 2777233
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  2777264 aactagttacaaacccgtgcttcgcacgggtt 2777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 8964876 - 8964841
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  8964876 aactagttacaaacccgtgctttgcacgggttgaat 8964841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 9887270 - 9887305
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  9887270 aactagttacaaacccgtgctttgcacgggttgaat 9887305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 13270321 - 13270388
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||| ||| |||||||||   |||||| ||| |||| ||||||||||||||| ||||||    
T  13270321 atacaatttttgaattccccaaatgagggggattttttatcatgagtaaaaaattaacctccaaagcc 13270388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 15521111 - 15521080
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  15521111 aactagttacaaacccgtgcttcgcacgggtt 15521080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 19591123 - 19591092
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  19591123 aactagttacaaacccgtgcttcgcacgggtt 19591092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 21354006 - 21353975
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  21354006 aactagttacaaacccgtgcttcgcacgggtt 21353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 28974052 - 28974021
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  28974052 aactagttacaaacccgtgcttcgcacgggtt 28974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 29713866 - 29713831
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  29713866 aactagttacaaacccgtgctttgcacgggttgaat 29713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 30527587 - 30527622
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||| |||||||||||    
T  30527587 aactagttacaaacccgtgcttcgtacgggttgaat 30527622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 41983531 - 41983562
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  41983531 aactagttacaaacccgtgcttcgcacgggtt 41983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 51348109 - 51348074
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||| ||||||||||||||||    
T  51348109 aactagttacaaacccgtgtttcgcacgggttgaat 51348074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 8532265 - 8532231
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||| ||||||||||||||||||||||    
T  8532265 actagttacaaatccgtgcttcgcacgggttgaat 8532231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 14828803 - 14828833
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggtt 14828833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 16895991 - 16895957
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||| |||||||||||||||||||    
T  16895991 actagttacaaacccatgcttcgcacgggttgaat 16895957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 37756762 - 37756828
Alignment:
Q  467 acaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  37756762 acaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 37756828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 56541807 - 56541773
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||| ||||||||||||||||||||    
T  56541807 actagttacaaacctgtgcttcgcacgggttgaat 56541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 8e-70; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 757 - 1013
Target Start/End: Complemental strand, 42996983 - 42996736
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||| ||||||||         ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  42996983 aactagttacaaacccgtgcttcgcacaggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatat 42996893  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  42996892 tgcacaaactc-ggatattataaatgaatcacttttattgtatttttgaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgcat 42996795  T
Q  957 ttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||| ||| ||| ||||||||||||||||| | ||||||| || ||||||||||||||    
T  42996794 ttttcttaagaaaatgttgtcgttcataaatgtcaaaatcaagcaagcatattgcacaa 42996736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 38434277 - 38434525
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggt---------tgaataacatatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatat 38434367  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttt-taaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgca 955  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  38434368 tgcacaaact-cggatattataaatgaatcacttttattgtattttaaaaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgca 38434465  T
Q  956 tttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    |||||| ||| ||||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  38434466 tttttcttaagaaattgttgccgttcataaatgtgaaaatcaagcaagcatattgcacaa 38434525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 757 - 1013
Target Start/End: Original strand, 9226020 - 9226266
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  9226020 aactagttacaaacccgtgcttcgcacgggt---------tgaataacatatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatat 9226110  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| ||||| || ||| | ||||| ||| ||||||| | |||||||||||||||||  ||||||| ||||||||||||||||||||||||| | |||||    
T  9226111 tgcacaaact-cgaatattctaaataaatcacttttactatatttttaaaaaactttgttataaaggagaaatgagcaaattaagggaaataac-tgcat 9226208  T
Q  957 ttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
     ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  9226209 ctttctaagaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 9226266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 811 - 996
Target Start/End: Original strand, 42244625 - 42244813
Alignment:
Q  811 tgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgtattt-----ttaa 905  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||| |||||||       ||    
T  42244625 tgtaaaaaatttgttcctaagaaaaaatgaacaaattaatgaatattgcacaaact-cggatattctaaataaatcacttttactgtatttaaaaaaaaa 42244723  T
Q  906 aaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||| | | ||| ||||||| |||||| |||| ||||||||| |||||||||    
T  42244724 aaaactttattataaaggagaaatgagcaaattaaggaaaatagc-tacatctttctaagaaattgctgtcattcataaatgtgaaaatca 42244813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 795 - 865
Target Start/End: Complemental strand, 45122043 - 45121973
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| ||||| |||| ||||    
T  45122043 gttgaataacgtatttcggaaaaaatttgttccaaagaaaaaatgagcaaattaaggaatagtgcacaaac 45121973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 865
Target Start/End: Original strand, 42298834 - 42298906
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||| ||| |||||||||| |||||| ||| ||||||||||| |||||| |||||||||| ||||    
T  42298834 gggttgaataacgtatcttgtaaaaaaattgttctaaacaaaaaatgaactaattaaggaatattgcacaaac 42298906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 916 - 986
Target Start/End: Complemental strand, 34130609 - 34130540
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||  ||||| || ||||||| |||| |||||||||||||||||||||    
T  34130609 tataaaggagaaatgagcaaattaagaaaaatagct-gcattttcctaagaaattgttgtcgttcataaat 34130540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 42220072 - 42220014
Alignment:
Q  465 atacaatttttgagtt-ctccaaatgagaaagattttatattatgaataaaaaattaac 522  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||    
T  42220072 atacaatttttgagtttctccaaataagagagattttatattatgaataaaatattaac 42220014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 46449227 - 46449149
Alignment:
Q  446 ctcccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacct 524  Q
    ||||||||| |||||  | ||||||||||||||||| | |||||||  ||||||| |||||||| ||||||||||||||    
T  46449227 ctcccaaaacccttccccaatacaatttttgagttccctaaatgagggagattttttattatgagtaaaaaattaacct 46449149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 31896812 - 31896848
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  31896812 taactagttacaaacccgtgcttcgcacgggttgaat 31896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 39647980 - 39648016
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  39647980 taactagttacaaacccgtgcttcgcacgggttgaat 39648016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 691331 - 691296
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  691331 aactagttacaaacccgtgcttcgcacgggttgaat 691296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 12960649 - 12960614
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  12960649 aactagttacaaacccgtgcttcgcacgggttgaat 12960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 17817761 - 17817726
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  17817761 aactagttacaaacccgtgcttcgcacgggttgaat 17817726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 21669231 - 21669266
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  21669231 aactagttacaaacccgtgcttcgcacgggttgaat 21669266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 39278280 - 39278245
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  39278280 aactagttacaaacccgtgcttcgcacgggttgaat 39278245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 42620399 - 42620466
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| |||||||||    ||||| |||||||| ||||||||||||||| ||||||    
T  42620399 atacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaattaacctccaaagcc 42620466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 795 - 865
Target Start/End: Complemental strand, 8998517 - 8998447
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||| ||||| | |||||| ||||||||||| |||||||| |||||||| ||||| |||| ||||    
T  8998517 gttgaataacgtatttcgaaaaaaaattgttccaaaggaaaaatgagcaaattaaggaatagtgcaaaaac 8998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 15595466 - 15595432
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaat 15595432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 757 - 791
Target Start/End: Complemental strand, 49023355 - 49023321
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaa 791  Q
    |||||||||||||||||||||||||||||||||||    
T  49023355 aactagttacaaacccgtgcttcgcacgggttgaa 49023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 848
Target Start/End: Complemental strand, 1484851 - 1484767
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaatta 848  Q
    |||||| ||||||||||||||||||||||||||| |||         |||||||||||||||| | |||||| |||| |||||||| |||||||    
T  1484851 ttaactggttacaaacccgtgcttcgcacgggtttaat---------aacatattttgtaaaataattgttctaaaggaaaaatgagcaaatta 1484767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 792
Target Start/End: Original strand, 19049238 - 19049275
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19049238 ttaactagttacaaacccgtacttcgcacgggttgaat 19049275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 792
Target Start/End: Complemental strand, 27840558 - 27840521
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27840558 ttaactagttacaaacccgtgctttgcacgggttgaat 27840521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 28437572 - 28437657
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||  || | ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  28437572 cccaaaatccacctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 28437657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 934 - 1013
Target Start/End: Original strand, 4481283 - 4481362
Alignment:
Q  934 aaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||||||||||||| || |||| ||||||| |||||  || ||||||||||| ||||||||| || ||||||||||||||    
T  4481283 aaattaagggaaataact-gcatctttctaagaaattactgccgttcataaatgtgaaaatcaagcaagcatattgcacaa 4481362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 760 - 792
Target Start/End: Complemental strand, 9151458 - 9151426
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaat 9151426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 984
Target Start/End: Complemental strand, 19124119 - 19124060
Alignment:
Q  924 agaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataa 984  Q
    ||||||||||||||||||||| ||| |  |||||||||||||| |||||||||||| ||||    
T  19124119 agaaatgagcaaattaagggagatagcc-gcatttttctaaaagattgttgtcgtttataa 19124060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 24682276 - 24682312
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24682276 taactagttacaaacccgtgctttgcacgggttgaat 24682312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 27732951 - 27732987
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||| ||||||||    
T  27732951 taactagttacaaacccgtgcttcgcactggttgaat 27732987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 272590 - 272625
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||| ||||||||||||||||||||||    
T  272590 aactagttacaaatccgtgcttcgcacgggttgaat 272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 516
Target Start/End: Original strand, 374618 - 374665
Alignment:
Q  469 aatttttgagttctccaaatgagaaagattttatattatgaataaaaa 516  Q
    ||||||| |||||| ||||||||| ||||||||||||||||| |||||    
T  374618 aattttttagttcttcaaatgagagagattttatattatgaagaaaaa 374665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 793 - 848
Target Start/End: Complemental strand, 1483753 - 1483698
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaatta 848  Q
    ||||| ||||||||||||||||||| | |||||| |||| |||||||| |||||||    
T  1483753 gggtttaataacatattttgtaaaataattgttctaaaggaaaaatgagcaaatta 1483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 11834956 - 11834991
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||| |||||||||||||||||||||||||||    
T  11834956 aactagttccaaacccgtgcttcgcacgggttgaat 11834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 996
Target Start/End: Complemental strand, 19123121 - 19123053
Alignment:
Q  926 aaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
    ||||||||||||||||||| ||| |  |||||||||||| | | | |||||||| ||||||||||||||||    
T  19123121 aaatgagcaaattaagggagatagc--gcatttttctaagagaatattgtcgtttataaatatgaaaatca 19123053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 21597943 - 21597978
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||| |||||||||||||||||||||||||||    
T  21597943 aactagttccaaacccgtgcttcgcacgggttgaat 21597978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 44720123 - 44720061
Alignment:
Q  465 atacaatttttgagttctcc--aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| ||  |||||||| ||||||| ||||| || |||||||||||||||    
T  44720123 atacaatttttgagttcccctcaaatgagagagattttttattacgagtaaaaaattaacctc 44720061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 47573332 - 47573363
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  47573332 aactagttacaaacccgtgcttcgcacgggtt 47573363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 465 - 530
Target Start/End: Original strand, 3571806 - 3571872
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||    
T  3571806 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 3571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 4850494 - 4850460
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| ||||||||||||    
T  4850494 actagttacaaacccgtgcttcacacgggttgaat 4850460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 6911359 - 6911389
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  6911359 actagttacaaacccgtgcttcgcacgggtt 6911389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 17172935 - 17172901
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||| ||||||    
T  17172935 actagttacaaacccgtgcttcgcacggattgaat 17172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 23476587 - 23476621
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| ||||||||||||    
T  23476587 actagttacaaacccgtgcttcacacgggttgaat 23476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 793 - 865
Target Start/End: Original strand, 23476613 - 23476686
Alignment:
Q  793 gggttgaataacatattttgtaaaaa-atttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||||||| || |||||| | |||||| |||| |||||||| ||||||||  ||||||||| ||||    
T  23476613 gggttgaataacatatcttataaaaataattgttctaaaggaaaaatgagcaaattaagaaatattgcacaaac 23476686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 8e-70; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 756 - 1013
Target Start/End: Complemental strand, 9702752 - 9702502
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    |||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  9702752 taactagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaata 9702662  T
Q  856 ttgcataaactccggataatataaatgaattacttttattgtattttt--aaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttg 953  Q
    ||||| ||||| |||||| ||||||||||| | |||||||||||||||  ||||||||||  ||||||||||||||||||||||||| ||||||||| ||    
T  9702661 ttgcacaaact-cggatattataaatgaatcatttttattgtatttttaaaaaaaactttgttataaagaagaaatgagcaaattaaaggaaatatc-tg 9702564  T
Q  954 catttttc-taaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  9702563 catttttcttaagaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 9702502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 796 - 1013
Target Start/End: Original strand, 3209950 - 3210169
Alignment:
Q  796 ttgaataacatattttgtaaaaaatttgttccaaagaaaaaat--gaacaaattaatgaatattgcataaactccggataatataaatgaattactttta 893  Q
    ||||||||| ||| | |||||||||| |||||||||||||||   || |||||||||||||||| || |||||| ||||| | ||||| ||| |||||||    
T  3209950 ttgaataacttatctcgtaaaaaattagttccaaagaaaaaaaaagagcaaattaatgaatatttcacaaactc-ggatattctaaataaatcactttta 3210048  T
Q  894 ttgtatttttaaaaaacttt-tgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaa 992  Q
     ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||||| |||||    
T  3210049 ctgtatttttaaaaaactttgtttataaaggagaaatgagcaaattaagggaaataa-ttgcattttcctaagaaattgttgtcgttcataaatgtgaaa 3210147  T
Q  993 atcaggc-agcatattgcacaa 1013  Q
    |||| || ||||||||||||||    
T  3210148 atcaagcaagcatattgcacaa 3210169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 806 - 1013
Target Start/End: Complemental strand, 290933 - 290726
Alignment:
Q  806 tattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgtattttta 904  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||| |||||  ||||| | ||||| ||| |||||||   ||||||||    
T  290933 tattttgtaaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatattgcacaaactt-ggatattctaaataaatcacttttacaatattttta 290835  T
Q  905 aaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agca 1003  Q
    |||||||||  ||||||| ||||||||||||||||||||||||| | ||||| ||||||| |||||| || ||||||||||| ||||||||| || ||||    
T  290834 aaaaactttgttataaaggagaaatgagcaaattaagggaaatagc-tgcatctttctaagaaattgatgccgttcataaatgtgaaaatcaagcaagca 290736  T
Q  1004 tattgcacaa 1013  Q
    ||||||||||    
T  290735 tattgcacaa 290726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 793 - 909
Target Start/End: Original strand, 12763103 - 12763217
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| |||||||||||||||| |||| ||||||||  ||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||    
T  12763103 gggttgaataacgtatcttgtaaaaaatttgtt-caaaaaaaaaatgtgcaaattaatgaatattgcacaaact-cggatattctaaataaatcactttt 12763200  T
Q  893 attgtatttttaaaaaa 909  Q
    | |||||||| ||||||    
T  12763201 actgtattttaaaaaaa 12763217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 758 - 909
Target Start/End: Original strand, 12702061 - 12702201
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||||||||||||||||||||||||||||||||         ||  ||| ||||||||||||||||| ||| ||||||||  ||||||||||||||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaat---------aatgtatcttgtaaaaaatttgttcaaaa-aaaaaatgtgcaaattaatgaatatt 12702150  T
Q  858 gcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    ||| ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  12702151 gcacaaact-cggatattctaaataaatcacttttactgtattttaaaaaaa 12702201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 756 - 901
Target Start/End: Original strand, 7863527 - 7863659
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||| |||||||||||||||| |||| ||||| ||  ||||||||||||||    
T  7863527 taactagttacaaacccgtgcttcgcacgggt---------tgaataacgtatcttgtaaaaaatttgtt-caaaaaaaaagtg--caaattaatgaata 7863614  T
Q  856 ttgcataaactccggataatataaatgaattacttttattgtattt 901  Q
    ||||| ||||| |||||| | ||||| ||| |||||||||||||||    
T  7863615 ttgcacaaact-cggatattctaaataaatcacttttattgtattt 7863659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 757 - 901
Target Start/End: Original strand, 9809820 - 9809953
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||  ||| ||||||||||||||||| ||| ||||||||  |||||||||||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaat---------aatgtatcttgtaaaaaatttgttcaaaa-aaaaaatgtgcaaattaatgaatat 9809909  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtattt 901  Q
    |||| ||||| |||||| | ||||| ||| ||||||| |||||||    
T  9809910 tgcacaaact-cggatattctaaataaatcacttttactgtattt 9809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 9810002 - 9810071
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||    
T  9810002 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcctaagaaattgttgtcgttcataaat 9810071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 12702243 - 12702312
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||    
T  12702243 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcctaagaaattgttgtcgttcataaat 12702312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 756 - 860
Target Start/End: Original strand, 38041489 - 38041585
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaat 854  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||  ||||| |||||||||||||| |||||||| ||||    
T  38041489 taactagttacaaacccgtgcttcgcacgggttgaag---------aacatattttgtaaaaaaagttgtttcaaagaaaaaatgagcaaattaaggaat 38041579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 12763258 - 12763328
Alignment:
Q  916 tataaagaagaaatgagcaaa-ttaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||||||| |||||||||||||||||||||    
T  12763258 tataaaggagaaatgagcaaaattaagggaaatagct-gcatttttctaagaaattgttgtcgttcataaat 12763328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 7863710 - 7863779
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||| ||||||||||||||    
T  7863710 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcctaagaaattgctgtcgttcataaat 7863779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 791 - 865
Target Start/End: Complemental strand, 19365962 - 19365888
Alignment:
Q  791 atgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||||| ||| ||||||||||  ||||  ||||||||||||| |||||||| |||||||||| ||||    
T  19365962 atgggttgaataacgtatcttgtaaaaaaaatgttttaaagaaaaaatgagcaaattaaggaatattgcacaaac 19365888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 485 - 526
Target Start/End: Complemental strand, 15739543 - 15739502
Alignment:
Q  485 aaatgagaaagattttatattatgaataaaaaattaacctct 526  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  15739543 aaatgagaaagattttgtattatgaataaaaaattaacctct 15739502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 865
Target Start/End: Original strand, 32977128 - 32977200
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||| ||| |||||||||| ||||| ||||||||||||||  |||||||  ||||||||| ||||    
T  32977128 gggttgaataacgtatcttgtaaaaaaattgtttcaaagaaaaaatgagtaaattaagaaatattgcacaaac 32977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 37508438 - 37508506
Alignment:
Q  465 atacaatttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| ||||||||||    ||||| |||||||||||||||||||||||| ||||||    
T  37508438 atacaatttttgagttcctccaaatgaggggaattttttattatgaataaaaaattaacctccaaagcc 37508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 1685047 - 1685082
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  1685047 aactagttacaaacccgtgcttcgcacgggttgaat 1685082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 793 - 860
Target Start/End: Original strand, 2366866 - 2366933
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgca 860  Q
    |||||||||||| ||| |||||||||| || ||| |||| |||||||| |||||||| ||||||||||    
T  2366866 gggttgaataacgtatcttgtaaaaaaattattctaaaggaaaaatgagcaaattaaggaatattgca 2366933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 5620643 - 5620678
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaat 5620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 13596961 - 13596926
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  13596961 aactagttacaaacccgtgcttcgcacgggttgaat 13596926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 22602634 - 22602669
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  22602634 aactagttacaaacccgtgcttcgcacgggttgaat 22602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 448 - 530
Target Start/End: Complemental strand, 25026973 - 25026890
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||| |||||  | ||||||||||| |||||||| |||||||  ||||||| |||||||| ||||||||||||||| ||||    
T  25026973 cccaaaacccttccccaatacaattttttagttctcccaaatgagggagattttttattatgagtaaaaaattaacctccaaag 25026890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 34719500 - 34719465
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaat 34719465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 36366124 - 36366159
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  36366124 aactagttacaaacccgtgcttcgcacgggttgaat 36366159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 3086433 - 3086467
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaat 3086467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 23920325 - 23920291
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  23920325 actagttacaaacccgtgcttcgcacgggttgaat 23920291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 25695539 - 25695573
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaat 25695573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 42819330 - 42819364
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaat 42819364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 756 - 789
Target Start/End: Original strand, 4802094 - 4802127
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttg 789  Q
    ||||||||||||||||||||||||||||||||||    
T  4802094 taactagttacaaacccgtgcttcgcacgggttg 4802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 760 - 792
Target Start/End: Original strand, 14387898 - 14387930
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaat 14387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 865
Target Start/End: Original strand, 18037228 - 18037329
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    ||||||||||||||| |||||||||||||||||||         ||||| |||  ||||||||| ||||||   || |||||||| ||||||||||||||    
T  18037228 taactagttacaaactcgtgcttcgcacgggttga--------gataacgtatcatgtaaaaaaattgttcttgaggaaaaatgagcaaattaatgaata 18037319  T
Q  856 ttgcataaac 865  Q
    ||||| ||||    
T  18037320 ttgcacaaac 18037329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 35701094 - 35701026
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||||    
T  35701094 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagcc 35701026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 43136272 - 43136308
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||| |||||||||||||    
T  43136272 taactagttacaaacccgtgctttgcacgggttgaat 43136308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 752055 - 752090
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  752055 aactagttacaaacccgtgctttgcacgggttgaat 752090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 4883113 - 4883082
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  4883113 aactagttacaaacccgtgcttcgcacgggtt 4883082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 17997502 - 17997471
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  17997502 aactagttacaaacccgtgcttcgcacgggtt 17997471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 20350867 - 20350836
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  20350867 aactagttacaaacccgtgcttcgcacgggtt 20350836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 32977101 - 32977136
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32977101 aactagttacaaaccggtgcttcgcacgggttgaat 32977136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 33931156 - 33931125
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  33931156 aactagttacaaacccgtgcttcgcacgggtt 33931125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 34373668 - 34373699
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  34373668 aactagttacaaacccgtgcttcgcacgggtt 34373699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 36884780 - 36884815
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||| ||||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaat 36884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 19395695 - 19395665
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggtt 19395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 31295552 - 31295582
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  31295552 actagttacaaacccgtgcttcgcacgggtt 31295582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 34725259 - 34725289
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  34725259 actagttacaaacccgtgcttcgcacgggtt 34725289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 465 - 530
Target Start/End: Original strand, 38928749 - 38928815
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaag 530  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| ||||||||||||||| ||||    
T  38928749 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaag 38928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 41693183 - 41693149
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||| |||||||||||||||||||||    
T  41693183 actagttacaaactcgtgcttcgcacgggttgaat 41693149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 448 - 516
Target Start/End: Complemental strand, 6491235 - 6491166
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagtt-ctccaaatgagaaagattttatattatgaataaaaa 516  Q
    ||||||||| | || | |||||||||||||||| | ||||||||| |||||||| ||||||||| |||||    
T  6491235 cccaaaatcttcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaa 6491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 449 - 510
Target Start/End: Original strand, 19389849 - 19389910
Alignment:
Q  449 ccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaa 510  Q
    |||||||||| || | ||||||||||| ||||| ||||||||| | |||||| |||||||||    
T  19389849 ccaaaatcctcctccaatacaattttttagttccccaaatgaggaggattttgtattatgaa 19389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 784
Target Start/End: Complemental strand, 22917443 - 22917414
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacg 784  Q
    ||||||||||||||||||||||||||||||    
T  22917443 ttaactagttacaaacccgtgcttcgcacg 22917414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 41638388 - 41638331
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaac 522  Q
    ||||||||||| ||||| |||||||||  | ||||| |||||||| ||||||||||||    
T  41638388 atacaattttttagttccccaaatgagggaaattttttattatgagtaaaaaattaac 41638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 41695011 - 41694950
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| |||||||||||||||    
T  41695011 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc 41694950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 1e-65; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 793 - 1013
Target Start/End: Complemental strand, 17092317 - 17092096
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||| ||| ||||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  17092317 gggttgaataacatatcttgtaaaaaatttgttccaaaggagaaatgagcaatttaatgaatattgcacaaact-cggatattataaatgaatcactttt 17092219  T
Q  893 attgtattttt-aaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttc-taaaaaattgttgtcgttcataaatatga 990  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||||| |||    
T  17092218 attgtatttttaaaaaaactttgttataaagaagaaatgagcaaattaagggaaatatc-tgcatttttcttaagaaattgttgccgttcataaatgtga 17092120  T
Q  991 aaatcaggc-agcatattgcacaa 1013  Q
    |||||| || ||||||||||||||    
T  17092119 aaatcaagcaagcatattgcacaa 17092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 793 - 1013
Target Start/End: Complemental strand, 17026132 - 17025911
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||||||| |||||||||||||||| ||||| | |||| | ||||||||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  17026132 gggttgaataacatatcttgtaaaaaatttgttncaaaggagaaatnagcaaattaatgaatattgcacaaact-cggatattataaatgaatcactttt 17026034  T
Q  893 attgtatttttaaaaaacttttg-tataaagaagaaatgagcaaattaagggaaatatcttgcatttttc-taaaaaattgttgtcgttcataaatatga 990  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||||| |||    
T  17026033 attgtatttttaaaaaanctttgttataaagaagaaatgagcaaattaagggaaatatc-tgcatttttcttaagaaattgttgccgttcataaatgtga 17025935  T
Q  991 aaatcaggc-agcatattgcacaa 1013  Q
    |||||| || ||||||||||||||    
T  17025934 aaatcaagcaagcatattgcacaa 17025911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 793 - 1013
Target Start/End: Complemental strand, 16884263 - 16884043
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||   ||||||||||| |||||| |||| |||||| | ||||| ||| ||||||    
T  16884263 gggttgaataacgtattttgtaaaaaaattgttccaaagaaaaaatgagttaattaatgaatgttgcattaact-cggatattctaaataaatcactttt 16884165  T
Q  893 attgtatttt-taaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaa 991  Q
    | ||||||||  ||||||||||  ||||||| ||| ||||| || |||||||||||| ||| ||||||||||| ||||||||  ||||||||||| ||||    
T  16884164 actgtattttaaaaaaaactttgttataaaggagagatgagtaacttaagggaaatagctt-catttttctaagaaattgtttccgttcataaatgtgaa 16884066  T
Q  992 aatcaggc-agcatattgcacaa 1013  Q
    ||||| || ||||||||||||||    
T  16884065 aatcaagcaagcatattgcacaa 16884043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 793 - 1013
Target Start/End: Complemental strand, 17041953 - 17041733
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||   ||||||||||| |||||| |||| |||||| | ||||| ||| ||||||    
T  17041953 gggttgaataacgtattttgtaaaaaaattgttccaaagaaaaaatgagttaattaatgaatgttgcattaact-cggatattctaaataaatcactttt 17041855  T
Q  893 attgtatttt-taaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaa 991  Q
    | ||||||||  ||||||||||  ||||||| ||| ||||| || |||||||||||| ||| ||||||||||| ||||||||  ||||||||||| ||||    
T  17041854 actgtattttaaaaaaaactttgttataaaggagagatgagtaacttaagggaaatagctt-catttttctaagaaattgtttccgttcataaatgtgaa 17041756  T
Q  992 aatcaggc-agcatattgcacaa 1013  Q
    ||||| || ||||||||||||||    
T  17041755 aatcaagcaagcatattgcacaa 17041733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 795 - 1013
Target Start/End: Complemental strand, 14753645 - 14753429
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttat 894  Q
    |||||| ||||||| || |||||||||| ||| ||||||||||| | ||||||||||||||||||| ||| |  | ||| | ||||| ||| |||||||     
T  14753645 gttgaacaacatatcttataaaaaatttattctaaagaaaaaat-agcaaattaatgaatattgcacaaattt-gaatattctaaataaatcacttttac 14753548  T
Q  895 tgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaat 994  Q
    | |||||||||||||||||  ||||||| ||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||||| | |||||    
T  14753547 tatatttttaaaaaactttgttataaaggagaaatgagcaaattaagggaaatagc-tgcatctttctaagaaattgttgtcgttcataaatgttaaaat 14753449  T
Q  995 caggc-agcatattgcacaa 1013  Q
    || || ||||||||||||||    
T  14753448 caagcaagcatattgcacaa 14753429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 916 - 996
Target Start/End: Original strand, 10821153 - 10821232
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
    ||||||| ||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||| |||||||||    
T  10821153 tataaaggagaaatgagcaaattaagggaaatagct-gcattttcctaagaaattgttgtcgttcataaatgtgaaaatca 10821232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 38023493 - 38023553
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||    
T  38023493 atacaatttttgagttccccaaatgagagagattttttattatgagtaaaaaattaacctc 38023553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 757 - 865
Target Start/End: Original strand, 1691426 - 1691526
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaata 855  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||  || || |||||||||||||| |||||||| |||||    
T  1691426 aactagttacaaacccgtgcttcgcacgggttgaag---------aacatattttgtaaaaaaaattatttcaaagaaaaaatgagcaaattaaggaata 1691516  T
Q  856 ttgcataaac 865  Q
    ||||| ||||    
T  1691517 ttgcacaaac 1691526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 465 - 533
Target Start/End: Original strand, 8991010 - 8991079
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcca 533  Q
    ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  8991010 atacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaagcca 8991079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 38293922 - 38293862
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||| |||||||||||||||    
T  38293922 atacaatttttgagttccccaaatgagggagattttttattatgagtaaaaaattaacctc 38293862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 13765986 - 13766053
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| |||||||||    ||||| |||||||| ||||||||||||||||||||||    
T  13765986 atacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaattaacctctaaagcc 13766053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 860
Target Start/End: Original strand, 25124044 - 25124137
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    ||||||||||||||||||||||||||         ||||||||| |||||| |||||||||| ||||| ||||| ||||||||  ||||||| |||||||    
T  25124044 actagttacaaacccgtgcttcgcac---------gggttgaattacatatcttgtaaaaaaattgtttcaaaggaaaaatgagtaaattaaggaatatt 25124134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 25960655 - 25960725
Alignment:
Q  463 cgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||||| || |||||||  ||||||| |||||||| ||||||||||||||| ||||||    
T  25960655 cgatacaatttttgagttcccccaaatgagggagattttctattatgagtaaaaaattaacctccaaagcc 25960725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 532
Target Start/End: Complemental strand, 725986 - 725921
Alignment:
Q  469 aatttttgagttc-tccaaatgagaaagattttatattatgaataa-aaaattaacctctaaagcc 532  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||| |||||||||||||||||||    
T  725986 aatttttgagttcctccaaatgagggagattttttattatgaataaaaaaattaacctctaaagcc 725921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 9542628 - 9542664
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  9542628 taactagttacaaacccgtgcttcgcacgggttgaat 9542664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 909
Target Start/End: Original strand, 10820999 - 10821113
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||  || ||||||||||||| |||| |||||| || ||||||||||||||||| | |||||  ||||| | ||||| ||| ||||||    
T  10820999 gggttgaataacgtaacttataaaaaatttgtt-caaaaaaaaaaagagcaaattaatgaatattgaacaaact-tggatattctaaataaatcactttt 10821096  T
Q  893 attgtatttttaaaaaa 909  Q
    | |||||||| ||||||    
T  10821097 actgtattttaaaaaaa 10821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 32243509 - 32243441
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||| || ||||||| | |||||| |||||||| ||||||||||||||| ||||||    
T  32243509 atacaatttttgagttcccccaaatgaggatgattttttattatgattaaaaaattaacctccaaagcc 32243441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 4289027 - 4289062
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaat 4289062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 7364822 - 7364787
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  7364822 aactagttacaaacccgtgcttcgcacgggttgaat 7364787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 810 - 865
Target Start/End: Complemental strand, 24279051 - 24278996
Alignment:
Q  810 ttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||| ||||||| ||| |||||||| ||||||||||||||||||| ||||    
T  24279051 ttgtaaaaaaattgttccgaaggaaaaatgagcaaattaatgaatattgcacaaac 24278996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 45003662 - 45003696
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  45003662 actagttacaaacccgtgcttcgcacgggttgaat 45003696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 18018643 - 18018704
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||  ||||||| |||||||| |||||||||||||||    
T  18018643 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctc 18018704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 36567325 - 36567386
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||  ||||||| |||||||| |||||||||||||||    
T  36567325 atacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctc 36567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 3119898 - 3119958
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| ||||||||    |||||| |||||||| |||||||||||||||    
T  3119898 atacaatttttgagttccccaaatgaaggggattttttattatgagtaaaaaattaacctc 3119958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 465 - 521
Target Start/End: Complemental strand, 9618500 - 9618444
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaa 521  Q
    ||||||||||| ||||||||| || ||| | ||||| ||||||||||||||||||||    
T  9618500 atacaatttttaagttctccacattagagatattttgtattatgaataaaaaattaa 9618444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 19484615 - 19484651
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19484615 taactagttgcaaacccgtgcttcgcacgggttgaat 19484651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 463 - 526
Target Start/End: Complemental strand, 44020390 - 44020326
Alignment:
Q  463 cgatacaatttttgagttctc-caaatgagaaagattttatattatgaataaaaaattaacctct 526  Q
    ||||||||||||||||||| | || |||||  ||||||| |||||||| ||||||||||||||||    
T  44020390 cgatacaatttttgagttccctcagatgagggagattttttattatgagtaaaaaattaacctct 44020326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 516
Target Start/End: Original strand, 3737273 - 3737324
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaa 516  Q
    |||||||||||||||||| |||||||| | |||||| ||||||||| |||||    
T  3737273 atacaatttttgagttcttcaaatgaggatgattttgtattatgaagaaaaa 3737324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 5253337 - 5253306
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggtt 5253306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 6342728 - 6342759
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  6342728 aactagttacaaacccgtgcttcgcacgggtt 6342759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 515
Target Start/End: Original strand, 9087495 - 9087562
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaa 515  Q
    ||||||||||| || ||||||||||||| ||||| ||||||||| | | ||||||||| |||| ||||    
T  9087495 cccaaaatcctcctccgatacaatttttcagttccccaaatgaggagggttttatattttgaagaaaa 9087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 15084297 - 15084332
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||| |||||||||||||||||||||    
T  15084297 aactagttacaaactcgtgcttcgcacgggttgaat 15084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 524
Target Start/End: Complemental strand, 19382911 - 19382852
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacct 524  Q
    |||| |||||||||||| |||||||||   |||||| |||||||| ||||||||||||||    
T  19382911 atacgatttttgagttccccaaatgagggggattttttattatgagtaaaaaattaacct 19382852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 26828502 - 26828471
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  26828502 aactagttacaaacccgtgcttcgcacgggtt 26828471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 28609995 - 28609960
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  28609995 aactagttacaaacccgtgctttgcacgggttgaat 28609960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 515
Target Start/End: Complemental strand, 30523297 - 30523230
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctccaaatgagaaagattttatattatgaataaaa 515  Q
    ||||||||||| || | ||||||||||| ||||| |||||| |||| |||||| ||||||||| ||||    
T  30523297 cccaaaatcctcctccaatacaattttttagttccccaaattagaaggattttgtattatgaagaaaa 30523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 30922097 - 30922132
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30922097 aactagttacaaacccgtgcttcacacgggttgaat 30922132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 33908234 - 33908203
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  33908234 aactagttacaaacccgtgcttcgcacgggtt 33908203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Original strand, 35285583 - 35285614
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  35285583 aactagttacaaacccgtgcttcgcacgggtt 35285614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 37224057 - 37224026
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  37224057 aactagttacaaacccgtgcttcgcacgggtt 37224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 42782716 - 42782681
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42782716 aactagttacaaacccgtgcttcacacgggttgaat 42782681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 1992950 - 1992980
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  1992950 actagttacaaacccgtgcttcgcacgggtt 1992980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 792
Target Start/End: Original strand, 9916707 - 9916741
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||| ||||||||    
T  9916707 actagttacaaacccgtgcttcgcacaggttgaat 9916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 11707615 - 11707585
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggtt 11707585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 448 - 525
Target Start/End: Original strand, 30312435 - 30312513
Alignment:
Q  448 cccaaaatccttcttcgatacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||| ||| |||| ||||||||||| ||||| || |||||||   |||||| |||||||| |||||||||||||||    
T  30312435 cccaaaaccctccttcaatacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc 30312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 4041998 - 4041937
Alignment:
Q  465 atacaatttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| | ||||||||   |||||| |||||||| |||||||||||||||    
T  4041998 atacaatttttgagttccttcaaatgagggggattttttattatgagtaaaaaattaacctc 4041937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 469 - 533
Target Start/End: Original strand, 14008379 - 14008443
Alignment:
Q  469 aatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctctaaagcca 533  Q
    ||||||||||||| || ||||||||| |||||| |||| ||| ||||||||||||||| |||||||    
T  14008379 aatttttgagttcccccaaatgagaa-gattttttattttgagtaaaaaattaacctccaaagcca 14008443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 29880928 - 29880895
Alignment:
Q  344 caattttttagataatgataaacgaatgcttatg 377  Q
    |||||||||||| |||||||||||||||||||||    
T  29880928 caattttttagagaatgataaacgaatgcttatg 29880895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 40357491 - 40357430
Alignment:
Q  465 atacaatttttgagttctcc-aaatgagaaagattttatattatgaataaaaaattaacctc 525  Q
    ||||||||||||||||| || |||||||   |||||| |||||||| |||||||||||||||    
T  40357491 atacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctc 40357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 117; Significance: 4e-59; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 758 - 1013
Target Start/End: Complemental strand, 61754 - 61509
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||||||||||||||||||||||||||||||||         | | ||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  61754 actagttacaaacccgtgcttcgcacgggttgaat---------atcgtatcttgtaaaaaatttgttccaaaggaaaaatgagcaaattaatgaatatt 61664  T
Q  858 gcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcatt 957  Q
    ||| ||||| |||||| | ||||| ||| ||||||| | |||||||||||||||||  ||||||| ||||||||||||||||||||||||| | || ||     
T  61663 gcacaaact-cggatattctaaataaatcacttttactatatttttaaaaaactttgttataaaggagaaatgagcaaattaagggaaataac-tgtatc 61566  T
Q  958 tttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  61565 tttctaagaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 61509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 55602 - 55567
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||| |||||||    
T  55602 aactagttacaaacccgtgcttcgcacgagttgaat 55567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 1e-56; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 755 - 1013
Target Start/End: Complemental strand, 1932384 - 1932135
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaat 854  Q
    ||||||||||||||||||||||||||||||||||||||         | | ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  1932384 ttaactagttacaaacccgtgcttcgcacgggttgaat---------atcgtatcttgtaaaaaatttgttccaaagaaaaaatgagcaaattaatgaat 1932294  T
Q  855 attgcataaactccggataatataaatgaattacttttattgtattttt-aaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttg 953  Q
    |||||| ||||| |||||| | ||||| ||| ||| ||| | ||||||| ||||||||||  ||||||||||||||||||||||||||| ||||| | |     
T  1932293 attgcacaaact-cggatattctaaataaatcactgttactatatttttaaaaaaactttgttataaagaagaaatgagcaaattaaggaaaataac-ta 1932196  T
Q  954 catttttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    ||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  1932195 catctttctaagaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 1932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 757 - 996
Target Start/End: Complemental strand, 4425950 - 4425722
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||| ||||||||||         |||| |||| ||| |||||||||| || ||||||||||||||||| |||||||||||||||    
T  4425950 aactagttacaaacccgtgtttcgcacggg---------ttgactaacgtatcttgtaaaaaaattattccaaagaaaaaatgagcaaattaatgaatat 4425860  T
Q  857 tgcataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcat 956  Q
    |||| ||||| |||||| | ||||| ||| ||||||| |||||||||||||||||||  ||||||| |||||||| |||||||| | ||||| | |||||    
T  4425859 tgcacaaact-cggatattctaaataaatcacttttactgtatttttaaaaaactttgttataaaggagaaatgaacaaattaacgaaaatagc-tgcat 4425762  T
Q  957 ttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
     ||| ||| |||||||||| |||||||||| |||||||||    
T  4425761 ctttttaagaaattgttgttgttcataaatgtgaaaatca 4425722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 793 - 901
Target Start/End: Complemental strand, 8615098 - 8614994
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| |||||||||||||||| |||| ||||| ||  ||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||    
T  8615098 gggttgaataacgtatcttgtaaaaaatttgtt-caaaaaaaaagtg--caaattaatgaatattgcacaaact-cggatattctaaataaatcactttt 8615003  T
Q  893 attgtattt 901  Q
    |||||||||    
T  8615002 attgtattt 8614994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 916 - 986
Target Start/End: Complemental strand, 8614942 - 8614873
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||| |||||| ||||||||||||||    
T  8614942 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcctaagaaattgctgtcgttcataaat 8614873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 465 - 531
Target Start/End: Original strand, 4909962 - 4910029
Alignment:
Q  465 atacaatttttgagttc-tccaaatgagaaagattttatattatgaataaaaaattaacctctaaagc 531  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||| |||||    
T  4909962 atacaatttttaagttcctccaaatgagagagattttttattatgagtaaaaaattaacctccaaagc 4910029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 757 - 867
Target Start/End: Complemental strand, 33319091 - 33318993
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    ||||||||||||||||||||||||||||||||||||         ||| ||| |||||||||||||||| |||| ||||| ||  |||||||||||||||    
T  33319091 aactagttacaaacccgtgcttcgcacgggttgaat---------aacgtatcttgtaaaaaatttgtt-caaaaaaaaagtg--caaattaatgaatat 33319004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 916 - 986
Target Start/End: Complemental strand, 33318894 - 33318825
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| |||||||| |||||||||||||||| | ||||||||  ||| |||||||||||||||||||||    
T  33318894 tataaaggagaaatgaacaaattaagggaaatagc-tgcattttcttaagaaattgttgtcgttcataaat 33318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 1363266 - 1363230
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  1363266 taactagttacaaacccgtgcttcgcacgggttgaat 1363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 849
Target Start/End: Original strand, 22975744 - 22975800
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaa 849  Q
    |||||||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||    
T  22975744 gggttgaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaa 22975800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 793 - 849
Target Start/End: Complemental strand, 23812657 - 23812601
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaa 849  Q
    |||||||||||| ||| |||||||||| ||||||||||| |||||||| ||||||||    
T  23812657 gggttgaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaa 23812601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 875573 - 875538
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  875573 aactagttacaaacccgtgcttcgcacgggttgaat 875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 6966236 - 6966271
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  6966236 aactagttacaaacccgtgcttcgcacgggttgaat 6966271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 11681669 - 11681704
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  11681669 aactagttacaaacccgtgcttcgcacgggttgaat 11681704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 18389167 - 18389202
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  18389167 aactagttacaaacccgtgcttcgcacgggttgaat 18389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 18985191 - 18985226
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  18985191 aactagttacaaacccgtgcttcgcacgggttgaat 18985226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 24447837 - 24447802
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  24447837 aactagttacaaacccgtgcttcgcacgggttgaat 24447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 792
Target Start/End: Complemental strand, 4110102 - 4110068
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaat 4110068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 5753288 - 5753357
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| |||| |||| ||||||||| ||||| || ||||||| |||| |||||||||||||||||||||    
T  5753288 tataaaggagaattgagaaaattaaggaaaatagct-gcattttcctaagaaattgttgtcgttcataaat 5753357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 754 - 792
Target Start/End: Original strand, 9978704 - 9978742
Alignment:
Q  754 tttaactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  9978704 tttaactagttacaaactcgtgcttcgcacgggttgaat 9978742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 755 - 793
Target Start/End: Complemental strand, 29737681 - 29737643
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggttgaatg 793  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  29737681 ttaattagttacaaacccgtgcttcgcacgggttgaatg 29737643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 811 - 860
Target Start/End: Original strand, 3052050 - 3052099
Alignment:
Q  811 tgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgca 860  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||||||||    
T  3052050 tgtaaaaaaattgttctgaagaaaaaatgagcaaattaatgaatattgca 3052099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 788
Target Start/End: Original strand, 13456732 - 13456765
Alignment:
Q  755 ttaactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||||    
T  13456732 ttaactagttacaaacccgtgcttcgcacgggtt 13456765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 2624720 - 2624756
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||| |||||||||||||||    
T  2624720 taactagttacaaacccgtgcatcgcacgggttgaat 2624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 468 - 515
Target Start/End: Original strand, 8439420 - 8439468
Alignment:
Q  468 caatttttgagttct-ccaaatgagaaagattttatattatgaataaaa 515  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  8439420 caatttttgagttcttccagatgagaaagattttgtattatgaataaaa 8439468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 788
Target Start/End: Complemental strand, 22323830 - 22323798
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||||    
T  22323830 taactagttacaaacccgtgcttcgcacgggtt 22323798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 792
Target Start/End: Complemental strand, 33300711 - 33300675
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||| |||||||||||||||||    
T  33300711 taactagttacaaacccgtacttcgcacgggttgaat 33300675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 788
Target Start/End: Complemental strand, 2522066 - 2522035
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggtt 788  Q
    ||||||||||||||||||||||||||||||||    
T  2522066 aactagttacaaacccgtgcttcgcacgggtt 2522035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 5753126 - 5753161
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||| |||||||||||||||||    
T  5753126 aactagttacaaacccgtacttcgcacgggttgaat 5753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 793 - 857
Target Start/End: Original strand, 5753153 - 5753213
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatatt 857  Q
    |||||||||||| ||| ||||||||||||||||    | ||||||||| ||||||||||||||||    
T  5753153 gggttgaataacgtatattgtaaaaaatttgtt----aaaaaaaatgagcaaattaatgaatatt 5753213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 15043827 - 15043862
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15043827 aactagttacaaacccgtgcttcgcacggattgaat 15043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 34914660 - 34914593
Alignment:
Q  465 atacaatttttgagtt--ctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagcc 532  Q
    ||||||||||||||||  | ||||||||||  |||||| |||||||| ||||||||||||||| ||||||    
T  34914660 atacaatttttgagtttcccccaaatgaga--gattttttattatgagtaaaaaattaacctccaaagcc 34914593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 35160165 - 35160130
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||| ||||||||||||||||||||||    
T  35160165 aactagttacaaatccgtgcttcgcacgggttgaat 35160130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 33814918 - 33814888
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  33814918 actagttacaaacccgtgcttcgcacgggtt 33814888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 793 - 865
Target Start/End: Complemental strand, 33979200 - 33979127
Alignment:
Q  793 gggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    ||||| |||||| ||||||||||||||  || || ||||  |||||||| ||||||||||||||||||| ||||    
T  33979200 gggtttaataacgtattttgtaaaaaaaattatttcaaaagaaaaatgagcaaattaatgaatattgcacaaac 33979127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 88; Significance: 9e-42; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 760 - 1013
Target Start/End: Original strand, 151883 - 152126
Alignment:
Q  760 tagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattg 858  Q
    |||||||||||||||||||||||||||||||||         ||||||| ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  151883 tagttacaaacccgtgcttcgcacgggttgaat---------aacatatcttgtaaaaaaaattattccaaaggaaaaatgatcaaattaatgaatattg 151973  T
Q  859 cataaactccggataatataaatgaattacttttattgtatttttaaaaaacttttgtataaagaagaaatgagcaaattaagggaaatatcttgcattt 958  Q
     | |||||| ||||| | ||||  ||| ||||||| || | ||||||||||||||  ||||||| ||||||||||||||||||||||| | | |||||||    
T  151974 tacaaactc-ggatattctaaaa-aatcacttttactgaaattttaaaaaactttgttataaaggagaaatgagcaaattaagggaaaaagc-tgcattt 152070  T
Q  959 ttctaaaaaattgttgtcgttcataaatatgaaaatcaggc-agcatattgcacaa 1013  Q
    || ||  ||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  152071 ttttatgaaattgttgtcgttcataaatgtgaaaatcaagcaagcatattgcacaa 152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 916 - 996
Target Start/End: Original strand, 64581 - 64660
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaatatgaaaatca 996  Q
    ||||||| ||||||||||||||||||| ||||| |  |||||||||||| ||||||||||||||||||||| |||||||||    
T  64581 tataaaggagaaatgagcaaattaaggcaaatagcc-gcatttttctaagaaattgttgtcgttcataaatgtgaaaatca 64660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 812 - 909
Target Start/End: Original strand, 64440 - 64534
Alignment:
Q  812 gtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattacttttattgtatttttaaaaaa 909  Q
    ||||||||||||||  ||| |||||  || ||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||| |||||||| ||||||    
T  64440 gtaaaaaatttgtttaaaaaaaaaa--gagcaaattaatgaatattgcacaaact-cggatattctaaattaatcacttttactgtattttaaaaaaa 64534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 64402 - 64437
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||| ||||||||||||||||||||||||||    
T  64402 aactagttataaacccgtgcttcgcacgggttgaat 64437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 795 - 865
Target Start/End: Original strand, 8342 - 8412
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||    
T  8342 gttgaataacatatcttgtaaaaaaattgttccaaaggaaaaatgagcaaattaatgaatattgcacaaac 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 793 - 909
Target Start/End: Original strand, 10810 - 10922
Alignment:
Q  793 gggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaactccggataatataaatgaattactttt 892  Q
    |||||||||||| ||| ||||||||||||||||   || ||||||||  ||||||||||||| ||||| ||||| |||||| | ||||| ||| ||||||    
T  10810 gggttgaataacgtatcttgtaaaaaatttgtt---aaaaaaaaatgtgcaaattaatgaatcttgcacaaact-cggatattctaaataaatcactttt 10905  T
Q  893 attgtatttttaaaaaa 909  Q
    | |||||||| ||||||    
T  10906 actgtattttaaaaaaa 10922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 926 - 986
Target Start/End: Original strand, 10981 - 11040
Alignment:
Q  926 aaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    |||||| |||||||||||||||| || ||||||| |||| |||||||||||||||||||||    
T  10981 aaatgaacaaattaagggaaatagct-gcattttcctaagaaattgttgtcgttcataaat 11040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 757 - 867
Target Start/End: Original strand, 24918 - 25018
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatat 856  Q
    |||||||||||||||||||||||||||||||         |||||||| ||| |||||||||||||||| |||| |||||| |  |||||||||||||||    
T  24918 aactagttacaaacccgtgcttcgcacgggt---------tgaataacgtatcttgtaaaaaatttgtt-caaaaaaaaaaagtgcaaattaatgaatat 25007  T
Q  857 tgcataaactc 867  Q
    |||| ||||||    
T  25008 tgcacaaactc 25018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 916 - 986
Target Start/End: Original strand, 25108 - 25177
Alignment:
Q  916 tataaagaagaaatgagcaaattaagggaaatatcttgcatttttctaaaaaattgttgtcgttcataaat 986  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||  ||| |||||||||||||||||||||    
T  25108 tataaaggagaaatgagcaaattaagggaaatagc-tgcattttcttaagaaattgttgtcgttcataaat 25177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 795 - 865
Target Start/End: Original strand, 10674 - 10744
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaatattgcataaac 865  Q
    |||||||||| ||||| | |||||||||||||||||| |||||||| |||||||| ||||| |||| ||||    
T  10674 gttgaataacgtatttcggaaaaaatttgttccaaaggaaaaatgagcaaattaaggaatagtgcacaaac 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 849
Target Start/End: Complemental strand, 13065 - 12982
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaatgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaa 849  Q
    ||||||||||||||||||||||||||||||||         ||||||| ||| |||||||||| ||||||||||| ||||||||  |||||||    
T  13065 aactagttacaaacccgtgcttcgcacgggtt---------gaataacgtatcttgtaaaaaaattgttccaaaggaaaaatgaggaaattaa 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 792
Target Start/End: Original strand, 17399 - 17435
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||||||||||||||||||    
T  17399 taactagttacaaacccgtgcttcgcacgggttgaat 17435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 8175 - 8210
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  8175 aactagttacaaacccgtgcttcgcacgggttgaat 8210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 795 - 854
Target Start/End: Original strand, 33416 - 33475
Alignment:
Q  795 gttgaataacatattttgtaaaaaatttgttccaaagaaaaaatgaacaaattaatgaat 854  Q
    |||||||||  ||||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  33416 gttgaataaagtattttggaaaaaatttgttccaaaggaaaaatgagcaaattaaggaat 33475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 14690 - 14655
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||||||||||||    
T  14690 aactagttacaaacccgtgcttcgcacgggttgaat 14655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 465 - 531
Target Start/End: Original strand, 35502 - 35568
Alignment:
Q  465 atacaatttttgagttctccaaatgagaaagattttatattatgaataaaaaattaacctctaaagc 531  Q
    ||||||||||||||||| |||||||||    ||||| |||||||| ||||||||||||||| |||||    
T  35502 atacaatttttgagttccccaaatgaggggaattttttattatgagtaaaaaattaacctccaaagc 35568  T

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Target: scaffold0175 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 791 - 840
Target Start/End: Original strand, 27030 - 27079
Alignment:
Q  791 atgggttgaataacatattttgtaaaaaatttgttccaaagaaaaaatga 840  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  27030 atgggttgaataacatgtgttgtaaaaaatatgtttcaaagaaaaaatga 27079  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 796 - 860
Target Start/End: Complemental strand, 81099 - 81034
Alignment:
Q  796 ttgaataacatattttgtaaaaaat-ttgttccaaagaaaaaatgaacaaattaatgaatattgca 860  Q
    ||||||||||||| ||||||||| | ||||| ||||| |||||||| |||||||| ||||||||||    
T  81099 ttgaataacatatgttgtaaaaattattgtttcaaaggaaaaatgagcaaattaaggaatattgca 81034  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 788
Target Start/End: Original strand, 29637 - 29669
Alignment:
Q  756 taactagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||||    
T  29637 taactagttacaaacccgtgcttcgcacgggtt 29669  T

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Target: scaffold0381 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Complemental strand, 11274 - 11239
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    |||||||||||||||||||||| |||||||||||||    
T  11274 aactagttacaaacccgtgctttgcacgggttgaat 11239  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 792
Target Start/End: Original strand, 143213 - 143248
Alignment:
Q  757 aactagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||||||||||||||||| ||||||||    
T  143213 aactagttacaaacccgtgcttcgcacaggttgaat 143248  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Original strand, 25614 - 25644
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  25614 actagttacaaacccgtgcttcgcacgggtt 25644  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 788
Target Start/End: Complemental strand, 10906 - 10876
Alignment:
Q  758 actagttacaaacccgtgcttcgcacgggtt 788  Q
    |||||||||||||||||||||||||||||||    
T  10906 actagttacaaacccgtgcttcgcacgggtt 10876  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 792
Target Start/End: Complemental strand, 12995 - 12962
Alignment:
Q  759 ctagttacaaacccgtgcttcgcacgggttgaat 792  Q
    ||||||||||||| ||||||||||||||||||||    
T  12995 ctagttacaaacctgtgcttcgcacgggttgaat 12962  T

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