View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4717-Insertion-8 (Length: 544)

Name: NF4717-Insertion-8
Description: NF4717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4717-Insertion-8
NF4717-Insertion-8
[»] chr4 (18 HSPs)
chr4 (14-422)||(49833550-49833957)
chr4 (459-544)||(49833975-49834057)
chr4 (462-544)||(27769074-27769152)
chr4 (462-544)||(32683141-32683219)
chr4 (462-544)||(50019201-50019279)
chr4 (463-544)||(29649137-29649214)
chr4 (462-544)||(23988207-23988285)
chr4 (462-544)||(32323079-32323158)
chr4 (462-544)||(48262085-48262163)
chr4 (462-544)||(48531927-48532005)
chr4 (462-544)||(54342157-54342235)
chr4 (462-497)||(5442444-5442479)
chr4 (462-544)||(37827537-37827620)
chr4 (462-497)||(37916861-37916896)
chr4 (462-497)||(41726159-41726194)
chr4 (462-497)||(51321920-51321955)
chr4 (459-497)||(30966188-30966226)
chr4 (462-544)||(49500646-49500724)
[»] chr3 (18 HSPs)
chr3 (462-544)||(11432557-11432635)
chr3 (462-544)||(20833908-20833986)
chr3 (462-544)||(36673266-36673344)
chr3 (462-544)||(50902424-50902506)
chr3 (462-544)||(17947228-17947308)
chr3 (457-544)||(51736868-51736952)
chr3 (462-544)||(10661197-10661276)
chr3 (462-544)||(10728131-10728211)
chr3 (462-544)||(27239333-27239410)
chr3 (462-544)||(44904963-44905041)
chr3 (462-544)||(52617093-52617171)
chr3 (468-544)||(23752515-23752588)
chr3 (462-497)||(37455889-37455924)
chr3 (462-544)||(18750643-18750723)
chr3 (462-544)||(45254561-45254639)
chr3 (462-544)||(50761228-50761308)
chr3 (462-544)||(54629860-54629941)
chr3 (462-497)||(48380203-48380238)
[»] chr8 (15 HSPs)
chr8 (462-544)||(14781254-14781332)
chr8 (462-544)||(18957840-18957918)
chr8 (462-544)||(19716985-19717065)
chr8 (462-544)||(32498901-32498979)
chr8 (462-544)||(42304747-42304827)
chr8 (462-544)||(44724903-44724981)
chr8 (462-544)||(4030449-4030528)
chr8 (462-544)||(18305083-18305161)
chr8 (462-497)||(9287612-9287647)
chr8 (462-497)||(34893411-34893446)
chr8 (462-497)||(37857930-37857965)
chr8 (463-544)||(43307661-43307738)
chr8 (462-497)||(10294518-10294553)
chr8 (463-497)||(31626353-31626387)
chr8 (457-497)||(40012295-40012335)
[»] chr7 (26 HSPs)
chr7 (462-544)||(21068366-21068446)
chr7 (462-544)||(23102301-23102379)
chr7 (462-544)||(29613910-29613989)
chr7 (459-497)||(48136365-48136403)
chr7 (462-544)||(510656-510736)
chr7 (462-544)||(3023935-3024012)
chr7 (462-544)||(7994166-7994244)
chr7 (462-544)||(12741383-12741462)
chr7 (462-544)||(28343320-28343398)
chr7 (462-544)||(29893966-29894045)
chr7 (462-544)||(30823597-30823675)
chr7 (462-544)||(37971512-37971590)
chr7 (462-544)||(39785106-39785186)
chr7 (462-544)||(9881407-9881484)
chr7 (462-544)||(18839304-18839382)
chr7 (462-544)||(39029063-39029141)
chr7 (462-544)||(28034238-28034324)
chr7 (113-153)||(46490400-46490440)
chr7 (457-496)||(32884813-32884852)
chr7 (462-497)||(37328880-37328915)
chr7 (462-497)||(40459839-40459874)
chr7 (462-493)||(46035455-46035486)
chr7 (462-497)||(46405307-46405342)
chr7 (113-150)||(46479198-46479235)
chr7 (113-150)||(46520628-46520665)
chr7 (113-153)||(46524694-46524734)
[»] chr6 (6 HSPs)
chr6 (462-544)||(31068430-31068508)
chr6 (462-544)||(30384178-30384256)
chr6 (462-544)||(31896647-31896725)
chr6 (462-497)||(7498153-7498188)
chr6 (462-497)||(4199593-4199628)
chr6 (506-544)||(34774395-34774433)
[»] chr5 (9 HSPs)
chr5 (462-544)||(13999220-13999299)
chr5 (462-544)||(13926942-13927021)
chr5 (462-544)||(1459301-1459380)
chr5 (462-544)||(13717105-13717183)
chr5 (462-544)||(40012823-40012902)
chr5 (462-497)||(4239586-4239621)
chr5 (462-497)||(4549370-4549405)
chr5 (462-497)||(5950467-5950502)
chr5 (462-495)||(39853407-39853440)
[»] chr2 (16 HSPs)
chr2 (462-544)||(18178282-18178360)
chr2 (462-544)||(26789795-26789873)
chr2 (462-544)||(28845588-28845666)
chr2 (462-544)||(7027915-7027993)
chr2 (462-544)||(25289165-25289243)
chr2 (462-544)||(33136604-33136685)
chr2 (462-544)||(43079493-43079572)
chr2 (462-497)||(214631-214666)
chr2 (462-497)||(379963-379998)
chr2 (462-497)||(10658483-10658518)
chr2 (460-498)||(3576807-3576845)
chr2 (462-498)||(30239167-30239203)
chr2 (462-497)||(2374030-2374065)
chr2 (468-544)||(13832680-13832753)
chr2 (462-544)||(3464597-3464675)
chr2 (462-491)||(20156350-20156379)
[»] chr1 (15 HSPs)
chr1 (462-544)||(6313586-6313664)
chr1 (462-544)||(25613102-25613180)
chr1 (462-544)||(29395544-29395622)
chr1 (462-544)||(28386564-28386643)
chr1 (462-544)||(49231994-49232072)
chr1 (466-544)||(51702604-51702678)
chr1 (463-544)||(29220122-29220202)
chr1 (462-498)||(46329020-46329056)
chr1 (462-497)||(48176652-48176687)
chr1 (462-497)||(25830366-25830401)
chr1 (462-497)||(38535263-38535298)
chr1 (462-497)||(38557481-38557516)
chr1 (462-497)||(45273614-45273649)
chr1 (462-492)||(15835374-15835404)
chr1 (462-491)||(1923102-1923131)
[»] scaffold0940 (1 HSPs)
scaffold0940 (462-544)||(3580-3658)
[»] scaffold0054 (1 HSPs)
scaffold0054 (462-544)||(36406-36485)
[»] scaffold0042 (1 HSPs)
scaffold0042 (462-544)||(57176-57254)
[»] scaffold1521 (1 HSPs)
scaffold1521 (462-497)||(1298-1333)
[»] scaffold0383 (1 HSPs)
scaffold0383 (462-497)||(16153-16188)
[»] scaffold0152 (1 HSPs)
scaffold0152 (462-497)||(29386-29421)
[»] scaffold0492 (1 HSPs)
scaffold0492 (462-492)||(12094-12124)


Alignment Details
Target: chr4 (Bit Score: 397; Significance: 0; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 14 - 422
Target Start/End: Original strand, 49833550 - 49833957
Alignment:
Q  14 ggctcgtgtaggatgtcggtgaggatggtatatcggtgtctccgtatccgcggaggatcaggggccacacaacggtaaccatggcaagctagatatgtga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49833550 ggctcgtgtaggatgtcggtgaggatggtatatcggtgtctccgtatccgcggag-atcaggggccacacaacggtaaccatggcaagctagatatgtga 49833648  T
Q  114 tctggtggcgccatgaataccatagatcagggaagccatggatgaagaggatgaggggaccttgacccttttcagctatgtgcatattgatgccattgac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49833649 tctggtggcgccatgaataccatagatcagggaagccatggatgaagaggatgaggggaccttgacccttttcagctatgtgcatattgatgccattgac 49833748  T
Q  214 ggttacagttcggtgttctatgccctccaattccatttctctatgtgaatcttttgagtcgtggaaaacgtttatgatagtgtctgtcgctttgttgctt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49833749 ggttacagttcggtgttctatgccctccaattccatttctctatgtgaatcttttgagtcgtggaaaacgtttatgacagtgtctgtcgctttgttgctt 49833848  T
Q  314 aataatagggtgcgcaacttagaaaagaatgtacccatatcatatcatgggacggttacccacccaaatagaattcattttttgatttaaaatagttcaa 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49833849 aataatagggtgcgcaacttagaaaagaatgtacccatatcatatcatgggacggttacccacccaaatagaattcattttttgatttaaaatagttcaa 49833948  T
Q  414 taaaggtaa 422  Q
    |||||||||    
T  49833949 taaaggtaa 49833957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 49833975 - 49834057
Alignment:
Q  459 gtatattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| ||||| ||||||||||||    
T  49833975 gtatattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagattatgtgagattgtattga 49834057  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 27769152 - 27769074
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  27769152 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 27769074  T

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Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 32683141 - 32683219
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  32683141 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 32683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 50019279 - 50019201
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||    
T  50019279 tattggattagaattttaaaagactattttaataaa----aaaagtctttaaaattttaaaagactgtgtgagattgtattga 50019201  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 544
Target Start/End: Original strand, 29649137 - 29649214
Alignment:
Q  463 attggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  29649137 attggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 29649214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 23988285 - 23988207
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||| ||||| ||||||||||||    
T  23988285 tattggattaggattttaaaagactattttaataaa----aaaaatctttaagattttaaaagaatatgtgagattgtattga 23988207  T

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Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 32323158 - 32323079
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  32323158 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagattgtgtgagattgtattga 32323079  T

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Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 48262163 - 48262085
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| | ||||||||||    
T  48262163 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgaaattgtattga 48262085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 48531927 - 48532005
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||| |||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||||||||||||||||    
T  48531927 tatttgattaggattttaaaagactattttaataaa----ataagtctttaagattttaaaagattctgtaagattgtattga 48532005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 54342235 - 54342157
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  54342235 tattggattagaattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 54342157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 5442479 - 5442444
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  5442479 tattggattaggattttaaaagactattttaataaa 5442444  T

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Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 37827537 - 37827620
Alignment:
Q  462 tattggattaggattttaaaagactattttaat-aaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||||||||||||||||||| |||        |||||||| ||||||||||||| ||| ||||||||||||    
T  37827537 tattggattagaattttaaaagactattttaataaaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattga 37827620  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 37916896 - 37916861
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37916896 tattggattaggattttaagagactattttaataaa 37916861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 41726194 - 41726159
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    |||||||||| |||||||||||||||||||||||||    
T  41726194 tattggattatgattttaaaagactattttaataaa 41726159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 51321955 - 51321920
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||| ||||||||||||||    
T  51321955 tattggattaggattttaaaatactattttaataaa 51321920  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 497
Target Start/End: Original strand, 30966188 - 30966226
Alignment:
Q  459 gtatattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  30966188 gtatattggattatgattttaaaagattattttaataaa 30966226  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 49500646 - 49500724
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||| |||||||||||||||||||        ||||||| ||||||||||||| ||  ||||||||||||    
T  49500646 tattggattagaattttgaaagactattttaataaataaaa----tctttaagattttaaaagactgtgcgagattgtattga 49500724  T

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Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 11432635 - 11432557
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||    
T  11432635 tattggattaggattttaaaagactattttaataaa----aaaagtctttaaaattttaaaagactgtgtgagattgtattga 11432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 20833986 - 20833908
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||||||||||||||||    
T  20833986 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagattgtgtaagattgtattga 20833908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 36673266 - 36673344
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  36673266 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 36673344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 50902424 - 50902506
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||| |||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  50902424 tattggattaagattttaaaagactattttaataaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattga 50902506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 17947308 - 17947228
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||| ||||||||||||    
T  17947308 tattggattaggattttaaaagactattttaataaaaaaaaatc--ttttaaaattttaaaagactatgtgagattgtattga 17947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 457 - 544
Target Start/End: Original strand, 51736868 - 51736952
Alignment:
Q  457 gagtatattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||| ||||||||||||||||||||| ||||||||||||||        |||||||| ||||||||||||||||  ||||||||||||    
T  51736868 gagtgtattggattaggattttaaaatactattttaataaa---aaaaagtctttaagattttaaaagactatgcgagattgtattga 51736952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 10661276 - 10661197
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  10661276 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagattgtgtgagattgtattga 10661197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 10728131 - 10728211
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  10728131 tattggattaggattttaaaagactattttaataaa--aaaaaagtctttaagattttaaaagaatgtgtgagattgtattga 10728211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 27239333 - 27239410
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        || ||||| ||||||||||||| ||||||||||||||||    
T  27239333 tattggattaggattttaaaagactattttaataaa----aaaagt-tttaagattttaaaagactgtgtaagattgtattga 27239410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 44904963 - 44905041
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||| |||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  44904963 tattggattaagattttaaaagactattttaataaa----aaaggtctttaagattttaaaagactgtgtgagattgtattga 44905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 52617093 - 52617171
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  52617093 tattggattaggattttaaaagacaattttaataaa----aaaagtctttaagattttaaaagactttgtgagattgtattga 52617171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 23752515 - 23752588
Alignment:
Q  468 attaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  23752515 attaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 23752588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 37455924 - 37455889
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  37455924 tattggattaggattttaaaagactattttaataaa 37455889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 18750723 - 18750643
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||| ||| ||||||||||||    
T  18750723 tattgaattaggattttaaaagactattttaataaa--aaaaaaatctttaagattttaaaagactgtgtgagattgtattga 18750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 45254561 - 45254639
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||| |||||||||||||||||||||||||||||||         ||||||| ||||||||||||| ||| ||||||||||||    
T  45254561 tattagattaggattttaaaagactattttaataaa----aaaaatctttaagattttaaaagactgtgtgagattgtattga 45254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 50761228 - 50761308
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||| |||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  50761228 tattggattaggatattaaaagactattttaataaa--aaaaaagtctttaagattttaaaagattgtgtgagattgtattga 50761308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 54629941 - 54629860
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| || |||||||||| ||| ||||||||||||    
T  54629941 tattggattaggattttaaaagacaattttaataaa-aaaaaaagtctttaagatgttaaaagactgtgtgagattgtattga 54629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 48380238 - 48380203
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||| ||||||||||||||||||||||||    
T  48380238 tattggattagaattttaaaagactattttaataaa 48380203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 14781254 - 14781332
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  14781254 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 14781332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 18957840 - 18957918
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  18957840 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 18957918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 19716985 - 19717065
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  19716985 tattggattaggattttaaaagactattttaataaa--aaaaaagtctttaagattttaaaagactgtgtgagattgtattga 19717065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 32498979 - 32498901
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  32498979 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 32498901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 42304747 - 42304827
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  42304747 tattggattaggattttaaaagactattttaataaa--aaaaaagtctttaagattttaaaagactgtgtgagattgtattga 42304827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 44724903 - 44724981
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  44724903 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 44724981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 4030449 - 4030528
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||| |||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  4030449 tattagattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 4030528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 18305083 - 18305161
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  18305083 tattggattaggattttaaaagacaattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 18305161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 9287612 - 9287647
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  9287612 tattggattaggattttaaaagactattttaataaa 9287647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 34893446 - 34893411
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  34893446 tattggattaggattttaaaagactattttaataaa 34893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 37857965 - 37857930
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  37857965 tattggattaggattttaaaagactattttaataaa 37857930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 544
Target Start/End: Original strand, 43307661 - 43307738
Alignment:
Q  463 attggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||| |||||||||||||||||||||||||        |||||||| ||||||||||||| ||| |||||| |||||    
T  43307661 attggattaagattttaaaagactattttaataaa----aagagtctttaagattttaaaagactgtgtgagattggattga 43307738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 10294518 - 10294553
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10294518 tattggattaggattttaaaacactattttaataaa 10294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 497
Target Start/End: Complemental strand, 31626387 - 31626353
Alignment:
Q  463 attggattaggattttaaaagactattttaataaa 497  Q
    |||||||||||||||||||| ||||||||||||||    
T  31626387 attggattaggattttaaaacactattttaataaa 31626353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 40012295 - 40012335
Alignment:
Q  457 gagtatattggattaggattttaaaagactattttaataaa 497  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  40012295 gagtgtattggattaagattttaaaatactattttaataaa 40012335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 21068446 - 21068366
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||| |||| ||| ||||||||||||    
T  21068446 tattggattaggattttaaaagactattttaataaa--aaaaaagtctttaaaattttaaatgactgtgtgagattgtattga 21068366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 23102379 - 23102301
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  23102379 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 23102301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 29613910 - 29613989
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  29613910 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 29613989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 459 - 497
Target Start/End: Original strand, 48136365 - 48136403
Alignment:
Q  459 gtatattggattaggattttaaaagactattttaataaa 497  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48136365 gtatattggattaggattttaaaagactattttaataaa 48136403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 510736 - 510656
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||| ||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  510736 tattggattgggattttaaaagactattttaataaa--aaaaaagtctttaagattttaaaagactgtgtgagattgtattga 510656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 3024012 - 3023935
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        || ||||| ||||||||||||| ||| ||||||||||||    
T  3024012 tattggattaggattttaaaagactattttaataaa-----aaagtttttaagattttaaaagactgtgtgagattgtattga 3023935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 7994244 - 7994166
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||| ||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  7994244 tattggattaggattttaaaagagtattttaataaa----gaaagtctttaagattttaaaagactgtgtgagattgtattga 7994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 12741462 - 12741383
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||| |||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  12741462 tattggattaagattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 12741383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 28343398 - 28343320
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||| ||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  28343398 tattggattgggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 28343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 29894045 - 29893966
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  29894045 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagattgtgtgagattgtattga 29893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 30823675 - 30823597
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||| ||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  30823675 tattgaattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 30823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 37971512 - 37971590
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||  ||| ||||||||||||    
T  37971512 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagaccgtgtgagattgtattga 37971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 39785186 - 39785106
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||  ||||||||||||    
T  39785186 tattggattaggattttaaaagactattttaataaa--aaaaaagtctttaagattttaaaagactgtgcgagattgtattga 39785106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 9881407 - 9881484
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||         ||||||| ||||||||||||| ||| ||||||||||||    
T  9881407 tattggattaggattttaaaagacaattttaataaa-----aaattctttaagattttaaaagactgtgtgagattgtattga 9881484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 18839382 - 18839304
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||| ||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  18839382 tattggattaggattttaaaagattattttaataaa----aaaagtctttaagattttaaaagattgtgtgagattgtattga 18839304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 39029141 - 39029063
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||| ||||||||||||        |||||||| ||||||||| | | ||||||||||||||||    
T  39029141 tattggattaggattttaaaagattattttaataaa----aaaagtctttaagattttaaaatattgtgtaagattgtattga 39029063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 28034238 - 28034324
Alignment:
Q  462 tattggattaggattttaaaagactattttaata----aatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||| ||||||||||||||||||||||||||||    ||        |||||||||||||||||||||| ||| ||||||||||||    
T  28034238 tattgaattaggattttaaaagactattttaataaaataaaataaaaagtctttaaaattttaaaagactgtgtgagattgtattga 28034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 46490400 - 46490440
Alignment:
Q  113 atctggtggcgccatgaataccatagatcagggaagccatg 153  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  46490400 atctggtggcgccatgaataccagagttcagggaagccatg 46490440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 496
Target Start/End: Complemental strand, 32884852 - 32884813
Alignment:
Q  457 gagtatattggattaggattttaaaagactattttaataa 496  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  32884852 gagtgtattggattaagattttaaaagactattttaataa 32884813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 37328915 - 37328880
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37328915 tattggattagaattttaaaagactattttaataaa 37328880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 40459839 - 40459874
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40459839 tattggattagaattttaaaagactattttaataaa 40459874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 493
Target Start/End: Original strand, 46035455 - 46035486
Alignment:
Q  462 tattggattaggattttaaaagactattttaa 493  Q
    ||||||||||||||||||||||||||||||||    
T  46035455 tattggattaggattttaaaagactattttaa 46035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 46405307 - 46405342
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    |||| |||||||||||||||||||||||||||||||    
T  46405307 tattagattaggattttaaaagactattttaataaa 46405342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 46479198 - 46479235
Alignment:
Q  113 atctggtggcgccatgaataccatagatcagggaagcc 150  Q
    ||||||||||||||||||||||| || |||||||||||    
T  46479198 atctggtggcgccatgaataccagagttcagggaagcc 46479235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 46520628 - 46520665
Alignment:
Q  113 atctggtggcgccatgaataccatagatcagggaagcc 150  Q
    ||||||||||||||||||||||| || |||||||||||    
T  46520628 atctggtggcgccatgaataccagagttcagggaagcc 46520665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 46524694 - 46524734
Alignment:
Q  113 atctggtggcgccatgaataccatagatcagggaagccatg 153  Q
    ||||||||||||||||||||||| || || |||||||||||    
T  46524694 atctggtggcgccatgaataccagagttctgggaagccatg 46524734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 31068508 - 31068430
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  31068508 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 31068430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 30384178 - 30384256
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        | |||||| ||||||||||||| ||| ||||||||||||    
T  30384178 tattggattaggattttaaaagactattttaataaa----aaaagcctttaagattttaaaagactgtgtgagattgtattga 30384256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 31896725 - 31896647
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||| ||| ||| ||||||||||||    
T  31896725 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaatactgtgtgagattgtattga 31896647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 7498188 - 7498153
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  7498188 tattggattaggattttaaaagactattttaataaa 7498153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 4199593 - 4199628
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4199593 tattggattaggattttaaaacactattttaataaa 4199628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 544
Target Start/End: Complemental strand, 34774433 - 34774395
Alignment:
Q  506 gtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  34774433 gtctttaagattttaaaagactgtgtaagattgtattga 34774395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 13999220 - 13999299
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  13999220 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 13999299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 13927021 - 13926942
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||||||||||||||||       |||||||| |||| |||||||| ||| ||||||||||||    
T  13927021 tattggattaggattttaaaagactattttaataaat---aaaagtctttaagatttaaaaagactgtgtgagattgtattga 13926942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 1459301 - 1459380
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||| ||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  1459301 tattgaattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 1459380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 13717183 - 13717105
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| ||||||||||||    
T  13717183 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagattgtgtgagattgtattga 13717105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 40012823 - 40012902
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||  ||| ||||||||||||    
T  40012823 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagacagtgtgagattgtattga 40012902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 4239586 - 4239621
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  4239586 tattggattaggattttaaaagactattttaataaa 4239621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 4549370 - 4549405
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    |||| |||||||||||||||||||||||||||||||    
T  4549370 tattcgattaggattttaaaagactattttaataaa 4549405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 5950502 - 5950467
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    |||||||||| |||||||||||||||||||||||||    
T  5950502 tattggattatgattttaaaagactattttaataaa 5950467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 39853440 - 39853407
Alignment:
Q  462 tattggattaggattttaaaagactattttaata 495  Q
    ||||||||||| ||||||||||||||||||||||    
T  39853440 tattggattagaattttaaaagactattttaata 39853407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 18178360 - 18178282
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  18178360 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 18178282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 26789873 - 26789795
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  26789873 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 26789795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 28845666 - 28845588
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||| ||||||||||| ||||||||||||    
T  28845666 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagatttttaaagactatgtgagattgtattga 28845588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 7027993 - 7027915
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||| ||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  7027993 tattggattaggattttaaaagattattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 7027915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 25289243 - 25289165
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||| ||| ||||||||||||    
T  25289243 tattggattaggattttaaaagactattttaataaa----aaaaatctttaagattttaaaagactgtgtgagattgtattga 25289165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 33136685 - 33136604
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  33136685 tattggattaggattttaaaagacaattttaataaa-aaaaaaagtctttaagattttaaaagactgtgtgagattgtattga 33136604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 43079572 - 43079493
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  43079572 tattggattagaattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattgtattga 43079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 214631 - 214666
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  214631 tattggattaggattttaaaagactattttaataaa 214666  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 379998 - 379963
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  379998 tattggattaggattttaaaagactattttaataaa 379963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 10658518 - 10658483
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  10658518 tattggattaggattttaaaagactattttaataaa 10658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 3576845 - 3576807
Alignment:
Q  460 tatattggattaggattttaaaagactattttaataaat 498  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  3576845 tatattggattaggattttaaaagattattttaataaat 3576807  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 498
Target Start/End: Original strand, 30239167 - 30239203
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaat 498  Q
    |||||||||| ||||||||||||||||||||||||||    
T  30239167 tattggattatgattttaaaagactattttaataaat 30239203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 2374065 - 2374030
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2374065 tattgtattaggattttaaaagactattttaataaa 2374030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 13832680 - 13832753
Alignment:
Q  468 attaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||         ||||||| ||||||||||||| ||| ||||||||||||    
T  13832680 attaggattttaaaagactattttaataaa---aaaaaatctttaagattttaaaagactgtgtgagattgtattga 13832753  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 3464675 - 3464597
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||| |||||||||||||| ||        |||||||| ||||||||||||| ||| ||||| ||||||    
T  3464675 tattggattaggattttacaagactattttaattaa----aaaagtctttaagattttaaaagactgtgtcagattctattga 3464597  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 491
Target Start/End: Original strand, 20156350 - 20156379
Alignment:
Q  462 tattggattaggattttaaaagactatttt 491  Q
    ||||||||||||||||||||||||||||||    
T  20156350 tattggattaggattttaaaagactatttt 20156379  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 6313664 - 6313586
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  6313664 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 6313586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 25613180 - 25613102
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  25613180 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 25613102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 29395544 - 29395622
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  29395544 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 29395622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 28386564 - 28386643
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||| ||||||    
T  28386564 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattctattga 28386643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Complemental strand, 49232072 - 49231994
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  49232072 tattggattaggattttaaaagacaattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 49231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 51702678 - 51702604
Alignment:
Q  466 ggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  51702678 ggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaaaagactgtgtgagattgtattga 51702604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 544
Target Start/End: Complemental strand, 29220202 - 29220122
Alignment:
Q  463 attggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    |||||||||| ||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||||||||||    
T  29220202 attggattagaattttaaaagactattttaataaa-aaaaaaagtctttaagattttaaaagactgtgtgagattgtattga 29220122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 498
Target Start/End: Complemental strand, 46329056 - 46329020
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaat 498  Q
    |||||||||||||||||||||||||||||||||||||    
T  46329056 tattggattaggattttaaaagactattttaataaat 46329020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 48176652 - 48176687
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||||||||||||||||    
T  48176652 tattggattaggattttaaaagactattttaataaa 48176687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 25830366 - 25830401
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25830366 tattgaattaggattttaaaagactattttaataaa 25830401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 38535263 - 38535298
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38535263 tattggattaggattttaaaagattattttaataaa 38535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 38557481 - 38557516
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||| ||||||||||||    
T  38557481 tattggattaggattttaaaagattattttaataaa 38557516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 45273649 - 45273614
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||||||||||||||||||||| ||||||||||||    
T  45273649 tattggattaggattttaaaagattattttaataaa 45273614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 492
Target Start/End: Complemental strand, 15835404 - 15835374
Alignment:
Q  462 tattggattaggattttaaaagactatttta 492  Q
    |||||||||||||||||||||||||||||||    
T  15835404 tattggattaggattttaaaagactatttta 15835374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 491
Target Start/End: Original strand, 1923102 - 1923131
Alignment:
Q  462 tattggattaggattttaaaagactatttt 491  Q
    ||||||||||||||||||||||||||||||    
T  1923102 tattggattaggattttaaaagactatttt 1923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 3580 - 3658
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||| ||||| ||| ||||||||||||    
T  3580 tattggattaggattttaaaagactattttaataaa----aaaagtctttaagattttaagagactgtgtgagattgtattga 3658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 36406 - 36485
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| ||||| ||||||    
T  36406 tattggattaggattttaaaagactattttaataaa---aaaaagtctttaagattttaaaagactgtgtgagattatattga 36485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 57176 - 57254
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaatnnnnnnngtctttaaaattttaaaagactatgtaagattgtattga 544  Q
    ||||||||||| ||||||||||||||||||||||||        ||| |||| ||||||||||||| ||| ||||||||||||    
T  57176 tattggattagaattttaaaagactattttaataaa----aaaagtccttaagattttaaaagactgtgtgagattgtattga 57254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 1298 - 1333
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1298 tattgaattaggattttaaaagactattttaataaa 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Original strand, 16153 - 16188
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16153 tattgaattaggattttaaaagactattttaataaa 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 29421 - 29386
Alignment:
Q  462 tattggattaggattttaaaagactattttaataaa 497  Q
    ||||| ||||||||||||||||||||||||||||||    
T  29421 tattgaattaggattttaaaagactattttaataaa 29386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 492
Target Start/End: Complemental strand, 12124 - 12094
Alignment:
Q  462 tattggattaggattttaaaagactatttta 492  Q
    |||||||||||||||||||||||||||||||    
T  12124 tattggattaggattttaaaagactatttta 12094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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