View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4717_low_2 (Length: 402)

Name: NF4717_low_2
Description: NF4717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4717_low_2
NF4717_low_2
[»] chr5 (15 HSPs)
chr5 (16-384)||(17383961-17384328)
chr5 (104-384)||(17392671-17392941)
chr5 (223-375)||(13711792-13711944)
chr5 (222-375)||(17380184-17380343)
chr5 (183-375)||(19969176-19969368)
chr5 (289-384)||(17377593-17377688)
chr5 (220-262)||(17377685-17377727)
chr5 (314-384)||(20112204-20112274)
chr5 (314-375)||(27358069-27358130)
chr5 (315-371)||(9619197-9619253)
chr5 (220-384)||(19653554-19653718)
chr5 (234-375)||(1347601-1347742)
chr5 (314-375)||(26536253-26536314)
chr5 (314-370)||(14308587-14308643)
chr5 (333-361)||(32429441-32429469)
[»] chr2 (1 HSPs)
chr2 (220-372)||(15784913-15785065)
[»] chr1 (2 HSPs)
chr1 (334-384)||(26052742-26052792)
chr1 (103-164)||(26052612-26052673)
[»] chr6 (2 HSPs)
chr6 (215-287)||(16258080-16258152)
chr6 (314-362)||(14438256-14438304)
[»] chr3 (8 HSPs)
chr3 (327-375)||(32224417-32224465)
chr3 (215-287)||(32226912-32226984)
chr3 (313-375)||(24890631-24890692)
chr3 (224-270)||(32241577-32241623)
chr3 (314-372)||(45763906-45763964)
chr3 (215-283)||(32224305-32224373)
chr3 (326-370)||(32241772-32241816)
chr3 (214-273)||(45763806-45763866)
[»] scaffold1377 (1 HSPs)
scaffold1377 (314-365)||(1347-1398)


Alignment Details
Target: chr5 (Bit Score: 312; Significance: 1e-176; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 16 - 384
Target Start/End: Complemental strand, 17384328 - 17383961
Alignment:
Q  16 attcattgtcacatatgcaagaagcgggaatgtaagatacggaaatgataagtacatatagttatgaagagagtacaagaatttttagaccattgatttg 115  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  17384328 attcattgtcacatatgcaagaagcgtgaatgtaagatacggaaatgataagtacatatagttatgaagagagtccaagaattggtagaccattgatttg 17384229  T
Q  116 aataagcctatattgttcgaaccatcaaatccagtagtagtcaatattgtaagtaacnnnnnnnccgggtatacatctgggaactattgagattcaaaca 215  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||       || |||||||||||||||||||||||||||||||||    
T  17384228 aataagcctatattgttcgaaccatcaaatccagtagtagtaaatattgtaagtaacaaaaatacccggtatacatctgggaactattgagattcaaaca 17384129  T
Q  216 atgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17384128 atgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggt 17384029  T
Q  316 catatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17384028 catat-ctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcccaagcttc 17383961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 104 - 384
Target Start/End: Complemental strand, 17392941 - 17392671
Alignment:
Q  104 accattgatttgaataagcctatattgttcgaaccatcaaatccagtagtagtcaatattgtaagtaacnnnnnnnccgggtatacatctgggaactatt 203  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||||| | || ||||       || ||||||||||| ||||||  |    
T  17392941 accattgacttgaataagcctatattgttcaaaccatcaaattcagtagtagtgaatatcgaaactaacaaaaacaccaggtatacatctaggaactgct 17392842  T
Q  204 gagattcaaacaatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagt 303  Q
    ||||||||          ||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17392841 gagattca----------gcttacatgtgggagacattcttggacaggaggataaattttctaaaaattgagggctctccattggatttgggtgaagagt 17392752  T
Q  304 atggcaaatggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
    |||   |||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17392751 atgatgaatggtcataacttgtaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 17392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 375
Target Start/End: Original strand, 13711792 - 13711944
Alignment:
Q  223 cttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcatatcc 322  Q
    ||||||||  ||||||||  ||||||| ||||||||||  ||||||||||| |  ||||||||||| |||||| |||||||||   |||||||||||  |    
T  13711792 cttacatgtaggagagattgttggacaggaggataaatcatctaaaaattgggttctctccattggttttgggcgaagagtataaaaaatggtcataatc 13711891  T
Q  323 tgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
     | ||||||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  13711892 cgtaaaagtctctcattctgcaaaatatatgctgcaaatcggaaatcagcttc 13711944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 17380343 - 17380184
Alignment:
Q  222 gcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtga--agagtatggcaaatggtcata 319  Q
    ||||||||| | | |||||||||||  | | |||||||||||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  17380343 gcttacatgcgagggagatccttgggtagggggataaattttctaaagattgagggctcttcattggatttgggtgacgagagaatgacaaatggtcata 17380244  T
Q  320 tcctgcaaaagtc----tcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
      ||| |||||||    || ||||||||||||||||||| | || |||||||||||||||    
T  17380243 atctgtaaaagtcacaatcacattctgcaaaatatatgtcgtgattcgaaaatcagcttc 17380184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 375
Target Start/End: Original strand, 19969176 - 19969368
Alignment:
Q  183 ggtatacatctgggaactattgagattcaaacaatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctc 282  Q
    |||||||||||  |||||| | ||||||| | |||||||||||||||| ||||||||| |||| ||| || ||||| | |||||||||||| || |||||    
T  19969176 ggtatacatctaagaactagtaagattcagataatgacagcttacatgcgggagagatacttgaacaggaagataagtcttctaaaaattggggactctc 19969275  T
Q  283 cattggatttgggtgaagagtatggcaaatggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
    || |||||||| |  |  |||||||   ||  ||||| |||  ||| |||| || |||||||||||||| ||||| |||||||||||||||||    
T  19969276 caatggatttgagaaactagtatggaggattttcataacctttaaatgtctagcgttctgcaaaatatacgttgcaaatcgaaaatcagcttc 19969368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 17377688 - 17377593
Alignment:
Q  289 atttgggtgaagagtatggcaaatggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
    ||||| ||||||| |||||  ||||| |||| | || ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  17377688 atttgcgtgaagactatggtgaatggacataacttgtaaaagtctcgcatttcgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 17377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 17377727 - 17377685
Alignment:
Q  220 cagcttacatgagggagagatccttggacaagaggataaattt 262  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  17377727 cagcttacatgtgggagagatccttggacaggaggataaattt 17377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 384
Target Start/End: Complemental strand, 20112274 - 20112204
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
    |||||| |||| | |||||| ||||||||||||||||||||||| ||| ||||||||  |||| |||||||    
T  20112274 gtcataacctgtagaagtcttgcattctgcaaaatatatgttgcaaattgaaaatcatgttcgaaagcttc 20112204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 27358069 - 27358130
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
    ||||||||||| |||||||| ||||||| ||| |||||| |||| ||| |||||||||||||    
T  27358069 gtcatatcctgtaaaagtcttgcattcttcaagatatatattgcaaatagaaaatcagcttc 27358130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 9619253 - 9619197
Alignment:
Q  315 tcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcag 371  Q
    |||||||||| | ||||||||||||||| ||||||||  |||| |||||||||||||    
T  9619253 tcatatcctgtagaagtctcgcattctgaaaaatataccttgcaaatcgaaaatcag 9619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 384
Target Start/End: Original strand, 19653554 - 19653718
Alignment:
Q  220 cagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcata 319  Q
    ||||||||| | ||| |||||  | ||||| ||||||||||  | | |||| || |||||| || |||| ||  ||| ||||||| || |||||||||||    
T  19653554 cagcttacacgtgggcgagattgtaggacaggaggataaatcctttgaaaaatgggggctccccgttggtttcaggtcaagagtacggaaaatggtcata 19653653  T
Q  320 tcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
     | || || |||||||||||| ||||||| |||||||  ||  |||||||||||||  |||||||    
T  19653654 acttgtaagagtctcgcattcagcaaaatgtatgttgaaaaaagaaaatcagcttcagaagcttc 19653718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 1347601 - 1347742
Alignment:
Q  234 gagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcatatcctgcaaaagtct 333  Q
    |||||||||| ||||| || ||||||| ||||||||| || | ||||||| ||| |  || || |  ||||||| ||||  ||||| |||| || ||| |    
T  1347601 gagagatcctaggacaggaagataaatcttctaaaaaatgggagctctccgttgaagctgagtaactagtatgggaaatattcataacctgtaacagttt 1347700  T
Q  334 cgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
     ||||||| ||| ||||| ||||| ||||| |||||||||||    
T  1347701 tgcattcttcaatatataggttgcaaatcggaaatcagcttc 1347742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 26536314 - 26536253
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
    ||||||||||| | |||||| ||||||| ||| |||||| |||| ||||||||||| |||||    
T  26536314 gtcatatcctgtacaagtctagcattcttcaagatatatattgcaaatcgaaaatccgcttc 26536253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 14308643 - 14308587
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatca 370  Q
    ||||| || |||||| |||| || |||||||||||||||||||| ||||||| ||||    
T  14308643 gtcatgtcttgcaaacgtcttgcgttctgcaaaatatatgttgcaaatcgaagatca 14308587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 361
Target Start/End: Original strand, 32429441 - 32429469
Alignment:
Q  333 tcgcattctgcaaaatatatgttgcgaat 361  Q
    |||||||||||||||||||||||||||||    
T  32429441 tcgcattctgcaaaatatatgttgcgaat 32429469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 15785065 - 15784913
Alignment:
Q  220 cagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattggatttgggtgaagagtatggcaaatggtcata 319  Q
    ||||||||||| |||||||||  ||||||| |||||||| | |||||||  ||  |||||||| ||||| ||||||  ||||||| ||||||||||||||    
T  15785065 cagcttacatgtgggagagatttttggacaggaggataagtcttctaaattttttgggctctcaattggttttggggtaagagtacggcaaatggtcata 15784966  T
Q  320 tcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagc 372  Q
     |||| |||||||| |||||||  ||||| || | ||||||||||||||||||    
T  15784965 acctgtaaaagtcttgcattctttaaaatgtaagatgcgaatcgaaaatcagc 15784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 26052742 - 26052792
Alignment:
Q  334 cgcattctgcaaaatatatgttgcgaatcgaaaatcagcttcgcaagcttc 384  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  26052742 cgcattctgcaaaatatatgttgcgaatcgaatatcagtttcacaagcttc 26052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 26052612 - 26052673
Alignment:
Q  103 gaccattgatttgaataagcctatattgttcgaaccatcaaatccagtagtagtcaatattg 164  Q
    ||||||||||| | |||| |||||||||||| ||||||||||| |||||||||  |||||||    
T  26052612 gaccattgattagtataaacctatattgttcaaaccatcaaattcagtagtagcaaatattg 26052673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 16258080 - 16258152
Alignment:
Q  215 aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattg 287  Q
    |||||||| ||||||| |||||||||||||||| | ||| |||||| |||||||||||| || || |||||||    
T  16258080 aatgacaggttacatgcgggagagatccttggataggagaataaatcttctaaaaattggggactttccattg 16258152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 14438256 - 14438304
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatc 362  Q
    |||||||| || ||||| |||||||||||||||||||||| ||| ||||    
T  14438256 gtcatatcttgtaaaagcctcgcattctgcaaaatatatgatgcaaatc 14438304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 32224417 - 32224465
Alignment:
Q  327 aaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  32224417 aaagtcttgcattctgcaaaatatatgttacaaatcgaaaatcagcttc 32224465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 32226984 - 32226912
Alignment:
Q  215 aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctccattg 287  Q
    |||||||| |||||||  |||||||||||||||||  |||||||||  ||||||||||  || ||||||||||    
T  32226984 aatgacaggttacatgtcggagagatccttggacagaaggataaatcgtctaaaaatttgggactctccattg 32226912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 24890692 - 24890631
Alignment:
Q  313 ggtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagcttc 375  Q
    ||||||| |||| |||||||| ||||| | |||||||||||||||||||||||| ||| ||||    
T  24890692 ggtcataacctgtaaaagtctagcatttt-caaaatatatgttgcgaatcgaaagtcaacttc 24890631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 32241577 - 32241623
Alignment:
Q  224 ttacatgagggagagatccttggacaagaggataaattttctaaaaa 270  Q
    |||||||  ||||||||||||||||| |||||||||| |||||||||    
T  32241577 ttacatgccggagagatccttggacaggaggataaatcttctaaaaa 32241623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 45763906 - 45763964
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatcagc 372  Q
    |||||||||||||||||||| ||||||| ||||||||| |||   ||| ||||||||||    
T  45763906 gtcatatcctgcaaaagtctagcattcttcaaaatatacgttttaaattgaaaatcagc 45763964  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 32224305 - 32224373
Alignment:
Q  215 aatgacagcttacatgagggagagatccttggacaagaggataaattttctaaaaattgagggctctcc 283  Q
    |||||||| |||||||  ||||||||||||  ||| ||||||||||  ||||||||||| || ||||||    
T  32224305 aatgacaggttacatgttggagagatccttccacatgaggataaatcatctaaaaattggggactctcc 32224373  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 32241772 - 32241816
Alignment:
Q  326 aaaagtctcgcattctgcaaaatatatgttgcgaatcgaaaatca 370  Q
    |||| ||| ||||||||||||||||||||| | ||||||||||||    
T  32241772 aaaaatcttgcattctgcaaaatatatgttacaaatcgaaaatca 32241816  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 45763806 - 45763866
Alignment:
Q  214 caatgacagcttacatgagggagagatccttgga-caagaggataaattttctaaaaattg 273  Q
    |||||| |||||||||| | |||||||||||||| || |||||||||| ||||||| ||||    
T  45763806 caatgaaagcttacatgcgagagagatccttggaccaggaggataaatcttctaaagattg 45763866  T

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Target: scaffold1377 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1377
Description:

Target: scaffold1377; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 1347 - 1398
Alignment:
Q  314 gtcatatcctgcaaaagtctcgcattctgcaaaatatatgttgcgaatcgaa 365  Q
    |||||||| || ||||| |||||||||||||||||||||||||| |||||||    
T  1347 gtcatatcttgtaaaagcctcgcattctgcaaaatatatgttgcaaatcgaa 1398  T

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