View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4718-Insertion-1 (Length: 1040)

Name: NF4718-Insertion-1
Description: NF4718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4718-Insertion-1
NF4718-Insertion-1
[»] chr3 (39 HSPs)
chr3 (639-1027)||(49296485-49296874)
chr3 (640-1040)||(53836317-53836704)
chr3 (639-840)||(8599515-8599716)
chr3 (643-850)||(22488419-22488618)
chr3 (641-815)||(7436859-7437034)
chr3 (638-854)||(33693856-33694071)
chr3 (639-783)||(9817992-9818136)
chr3 (639-815)||(49458990-49459169)
chr3 (639-783)||(47466818-47466962)
chr3 (638-783)||(27261896-27262042)
chr3 (639-815)||(43173518-43173682)
chr3 (653-816)||(30237912-30238076)
chr3 (639-815)||(4962024-4962186)
chr3 (653-753)||(32766605-32766705)
chr3 (697-931)||(1666392-1666624)
chr3 (697-804)||(24063932-24064039)
chr3 (639-807)||(25932038-25932206)
chr3 (639-705)||(53644751-53644817)
chr3 (353-420)||(1156156-1156223)
chr3 (697-783)||(40064798-40064884)
chr3 (640-697)||(25050295-25050352)
chr3 (652-705)||(37833410-37833463)
chr3 (640-705)||(45731341-45731406)
chr3 (703-783)||(53644802-53644882)
chr3 (697-761)||(27163028-27163092)
chr3 (697-783)||(37833345-37833431)
chr3 (697-783)||(49294253-49294339)
chr3 (640-697)||(7667463-7667520)
chr3 (656-697)||(24064026-24064067)
chr3 (639-705)||(40064863-40064925)
chr3 (638-697)||(21385806-21385865)
chr3 (697-748)||(45731311-45731362)
chr3 (734-799)||(1545261-1545327)
chr3 (674-748)||(29650840-29650914)
chr3 (720-815)||(25050189-25050285)
chr3 (656-703)||(49294320-49294367)
chr3 (734-787)||(9030500-9030554)
chr3 (866-931)||(21386012-21386077)
chr3 (866-931)||(49458877-49458942)
[»] chr7 (43 HSPs)
chr7 (8-622)||(22632524-22633124)
chr7 (639-1040)||(4639219-4639616)
chr7 (8-467)||(22626046-22626517)
chr7 (639-994)||(37915398-37915754)
chr7 (684-1040)||(14741810-14742166)
chr7 (638-783)||(21024590-21024736)
chr7 (640-854)||(5771484-5771695)
chr7 (643-761)||(35314076-35314194)
chr7 (494-626)||(22626569-22626701)
chr7 (639-794)||(43172721-43172877)
chr7 (266-419)||(23366875-23367028)
chr7 (697-815)||(1253887-1254006)
chr7 (642-783)||(37391892-37392033)
chr7 (639-783)||(38910998-38911142)
chr7 (639-815)||(42611142-42611306)
chr7 (643-718)||(14742184-14742259)
chr7 (697-783)||(14731756-14731843)
chr7 (639-761)||(34657174-34657295)
chr7 (643-761)||(6269107-6269224)
chr7 (697-815)||(21486761-21486880)
chr7 (638-815)||(23017608-23017773)
chr7 (697-815)||(33496775-33496894)
chr7 (522-615)||(23326045-23326138)
chr7 (713-815)||(27149309-27149412)
chr7 (533-617)||(23367147-23367231)
chr7 (725-807)||(16710154-16710237)
chr7 (639-682)||(16710230-16710273)
chr7 (725-807)||(17684390-17684473)
chr7 (639-682)||(17684466-17684509)
chr7 (684-718)||(14742158-14742192)
chr7 (362-419)||(23250431-23250488)
chr7 (698-794)||(26201210-26201307)
chr7 (697-785)||(31175167-31175256)
chr7 (353-409)||(23234021-23234077)
chr7 (353-409)||(23243682-23243738)
chr7 (353-417)||(23341458-23341522)
chr7 (653-701)||(31175239-31175287)
chr7 (372-419)||(23284414-23284461)
chr7 (873-931)||(21486648-21486706)
chr7 (866-931)||(23017495-23017560)
chr7 (362-419)||(23354185-23354242)
chr7 (640-697)||(27149415-27149472)
chr7 (750-806)||(31445976-31446033)
[»] chr8 (26 HSPs)
chr8 (639-1040)||(19484572-19484973)
chr8 (639-815)||(6387200-6387377)
chr8 (638-815)||(8029165-8029330)
chr8 (639-784)||(26619927-26620072)
chr8 (640-780)||(27869074-27869215)
chr8 (640-815)||(27974266-27974442)
chr8 (640-815)||(28031535-28031711)
chr8 (637-816)||(42423829-42423996)
chr8 (639-812)||(18984958-18985119)
chr8 (639-815)||(41394488-41394652)
chr8 (697-815)||(4870523-4870642)
chr8 (643-815)||(24082814-24082972)
chr8 (640-815)||(12737396-12737560)
chr8 (710-785)||(33177259-33177335)
chr8 (640-697)||(44977472-44977529)
chr8 (697-804)||(12521764-12521871)
chr8 (726-848)||(27876479-27876600)
chr8 (726-848)||(28016660-28016781)
chr8 (639-693)||(3007131-3007185)
chr8 (643-743)||(7761210-7761310)
chr8 (697-779)||(41252687-41252763)
chr8 (639-692)||(33177214-33177267)
chr8 (713-807)||(35879996-35880091)
chr8 (651-693)||(12521731-12521773)
chr8 (866-931)||(8029377-8029442)
chr8 (866-931)||(12737607-12737672)
[»] chr1 (49 HSPs)
chr1 (639-1040)||(41353800-41354201)
chr1 (639-1040)||(8147721-8148110)
chr1 (637-1040)||(11578452-11578842)
chr1 (639-1040)||(1242637-1243023)
chr1 (638-926)||(5208612-5208899)
chr1 (710-1040)||(26757994-26758325)
chr1 (638-840)||(4005927-4006129)
chr1 (639-840)||(9174450-9174651)
chr1 (637-840)||(18246880-18247083)
chr1 (638-840)||(51107762-51107964)
chr1 (639-815)||(49452359-49452536)
chr1 (638-783)||(33886291-33886437)
chr1 (638-783)||(33957815-33957961)
chr1 (638-794)||(3593882-3594039)
chr1 (639-783)||(30176888-30177032)
chr1 (638-738)||(7799102-7799202)
chr1 (638-815)||(19863516-19863693)
chr1 (639-787)||(50037953-50038101)
chr1 (638-815)||(47370881-47371045)
chr1 (639-815)||(25254166-25254329)
chr1 (650-927)||(32759389-32759665)
chr1 (710-815)||(28403319-28403426)
chr1 (639-692)||(26758317-26758370)
chr1 (697-816)||(42637520-42637639)
chr1 (697-783)||(34751036-34751123)
chr1 (697-761)||(34019651-34019715)
chr1 (639-815)||(48965829-48965992)
chr1 (713-815)||(42303768-42303873)
chr1 (639-705)||(49236319-49236385)
chr1 (639-697)||(27257570-27257628)
chr1 (637-705)||(34019694-34019762)
chr1 (697-787)||(15928244-15928335)
chr1 (651-697)||(15928322-15928368)
chr1 (698-756)||(43855084-43855142)
chr1 (639-705)||(43855122-43855188)
chr1 (697-794)||(49971048-49971146)
chr1 (644-697)||(2292585-2292638)
chr1 (644-697)||(3583311-3583364)
chr1 (639-678)||(34750991-34751030)
chr1 (655-697)||(51903579-51903621)
chr1 (697-794)||(52182665-52182763)
chr1 (639-692)||(1109014-1109067)
chr1 (712-760)||(49236379-49236427)
chr1 (710-761)||(1108972-1109022)
chr1 (697-748)||(2292625-2292676)
chr1 (734-815)||(226512-226594)
chr1 (722-815)||(35176657-35176751)
chr1 (866-931)||(28403502-28403567)
chr1 (866-931)||(49452584-49452649)
[»] chr4 (49 HSPs)
chr4 (640-1040)||(8084550-8084950)
chr4 (697-1040)||(29469522-29469865)
chr4 (639-994)||(42936922-42937277)
chr4 (639-910)||(23670917-23671175)
chr4 (643-815)||(53573644-53573817)
chr4 (639-761)||(54561780-54561901)
chr4 (639-794)||(41206719-41206874)
chr4 (644-815)||(872117-872289)
chr4 (643-760)||(29965839-29965956)
chr4 (637-815)||(24965802-24965967)
chr4 (639-765)||(4511358-4511484)
chr4 (639-816)||(29509374-29509539)
chr4 (637-816)||(32890500-32890667)
chr4 (639-761)||(40487063-40487172)
chr4 (638-815)||(50517718-50517883)
chr4 (697-761)||(8562549-8562613)
chr4 (636-783)||(25013988-25014123)
chr4 (637-705)||(56423414-56423482)
chr4 (638-848)||(12754900-12755098)
chr4 (639-705)||(40163339-40163405)
chr4 (643-705)||(41469640-41469702)
chr4 (639-705)||(6486757-6486823)
chr4 (697-793)||(26490634-26490731)
chr4 (697-765)||(33140999-33141067)
chr4 (638-705)||(26449221-26449288)
chr4 (637-699)||(2326370-2326432)
chr4 (639-693)||(46862257-46862311)
chr4 (697-757)||(23170160-23170220)
chr4 (697-783)||(9973378-9973466)
chr4 (639-705)||(22480350-22480416)
chr4 (640-697)||(17503227-17503284)
chr4 (639-692)||(51967765-51967818)
chr4 (697-738)||(56423461-56423502)
chr4 (697-757)||(26449183-26449242)
chr4 (643-705)||(9973445-9973507)
chr4 (697-795)||(17503271-17503369)
chr4 (643-705)||(23170119-23170181)
chr4 (636-787)||(21305713-21305866)
chr4 (713-807)||(24454197-24454292)
chr4 (638-677)||(33141074-33141113)
chr4 (720-794)||(46862325-46862400)
chr4 (766-816)||(40317107-40317157)
chr4 (766-816)||(40327181-40327231)
chr4 (873-931)||(46862476-46862534)
chr4 (697-785)||(22480283-22480371)
chr4 (866-931)||(32890388-32890453)
chr4 (866-931)||(33139307-33139372)
chr4 (722-782)||(41469706-41469767)
chr4 (660-701)||(49418739-49418780)
[»] chr5 (26 HSPs)
chr5 (639-994)||(37797459-37797814)
chr5 (643-1040)||(28622512-28622910)
chr5 (639-994)||(5650129-5650469)
chr5 (639-840)||(7124228-7124416)
chr5 (643-783)||(25869313-25869454)
chr5 (639-740)||(32236888-32236989)
chr5 (640-931)||(29716216-29716490)
chr5 (636-815)||(35701848-35702015)
chr5 (644-815)||(31913993-31914152)
chr5 (639-782)||(33892262-33892393)
chr5 (707-815)||(4840873-4840982)
chr5 (643-739)||(16497276-16497372)
chr5 (697-761)||(34910160-34910224)
chr5 (711-785)||(3032758-3032833)
chr5 (701-843)||(16801173-16801314)
chr5 (650-761)||(36195679-36195790)
chr5 (639-783)||(21238203-21238334)
chr5 (698-761)||(2674555-2674618)
chr5 (649-703)||(36180222-36180276)
chr5 (641-705)||(34910203-34910267)
chr5 (697-815)||(29759238-29759356)
chr5 (639-697)||(29759343-29759401)
chr5 (713-815)||(16548588-16548691)
chr5 (697-844)||(36180094-36180241)
chr5 (360-419)||(9164515-9164574)
chr5 (639-705)||(19226272-19226338)
[»] chr2 (38 HSPs)
chr2 (643-1040)||(18899248-18899645)
chr2 (722-910)||(15224527-15224714)
chr2 (641-815)||(18726919-18727094)
chr2 (639-761)||(13908629-13908751)
chr2 (638-762)||(35403911-35404036)
chr2 (638-930)||(31846478-31846755)
chr2 (643-815)||(42242423-42242583)
chr2 (640-755)||(30851383-30851498)
chr2 (723-842)||(43304659-43304777)
chr2 (697-783)||(45160654-45160740)
chr2 (697-848)||(9731537-9731694)
chr2 (639-815)||(28546305-28546481)
chr2 (639-704)||(33263482-33263547)
chr2 (644-705)||(38411938-38411999)
chr2 (713-813)||(40830258-40830359)
chr2 (695-794)||(24026417-24026517)
chr2 (700-794)||(38295070-38295165)
chr2 (697-815)||(2307913-2308030)
chr2 (638-692)||(12520314-12520368)
chr2 (655-697)||(32241815-32241857)
chr2 (698-783)||(41979360-41979448)
chr2 (651-815)||(34342869-34343020)
chr2 (697-740)||(38411978-38412021)
chr2 (644-697)||(9731681-9731734)
chr2 (640-705)||(32643924-32643989)
chr2 (644-695)||(40830364-40830415)
chr2 (690-794)||(37790332-37790435)
chr2 (697-761)||(13327677-13327741)
chr2 (660-703)||(10438655-10438698)
chr2 (697-740)||(33263459-33263502)
chr2 (639-682)||(41979451-41979494)
chr2 (708-785)||(2104286-2104364)
chr2 (639-697)||(2307868-2307926)
chr2 (873-931)||(34342755-34342813)
chr2 (734-815)||(37810304-37810386)
chr2 (697-743)||(43618146-43618192)
chr2 (866-931)||(30850868-30850933)
chr2 (640-697)||(43618179-43618236)
[»] chr6 (19 HSPs)
chr6 (639-840)||(6788940-6789141)
chr6 (639-840)||(1462728-1462932)
chr6 (638-765)||(10110657-10110784)
chr6 (643-761)||(3000915-3001033)
chr6 (643-761)||(31995655-31995773)
chr6 (639-815)||(16439316-16439480)
chr6 (639-815)||(31975066-31975230)
chr6 (697-854)||(24202691-24202847)
chr6 (715-815)||(28900208-28900308)
chr6 (638-794)||(31534418-31534562)
chr6 (640-765)||(32567610-32567727)
chr6 (713-814)||(2607556-2607658)
chr6 (643-705)||(7834997-7835059)
chr6 (866-931)||(2607419-2607484)
chr6 (866-931)||(31975278-31975343)
chr6 (639-695)||(24202836-24202892)
chr6 (639-673)||(28900169-28900203)
chr6 (639-688)||(2607670-2607719)
chr6 (697-787)||(28042039-28042127)
[»] scaffold0002 (1 HSPs)
scaffold0002 (639-840)||(16137-16338)
[»] scaffold0246 (2 HSPs)
scaffold0246 (639-761)||(25002-25111)
scaffold0246 (638-693)||(1971-2026)
[»] scaffold0573 (2 HSPs)
scaffold0573 (715-815)||(9486-9586)
scaffold0573 (639-673)||(9591-9625)
[»] scaffold0024 (1 HSPs)
scaffold0024 (698-806)||(136156-136265)
[»] scaffold0013 (1 HSPs)
scaffold0013 (745-815)||(89909-89980)
[»] scaffold0118 (1 HSPs)
scaffold0118 (650-748)||(38486-38584)
[»] scaffold0037 (1 HSPs)
scaffold0037 (640-700)||(36903-36963)
[»] scaffold0012 (1 HSPs)
scaffold0012 (644-724)||(174517-174597)
[»] scaffold0116 (1 HSPs)
scaffold0116 (713-759)||(4962-5008)


Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-157; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 639 - 1027
Target Start/End: Complemental strand, 49296874 - 49296485
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49296874 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaatta 49296775  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  49296774 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaataatgaaaaatatagacttac-ttataaatgcaaag 49296676  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    |||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  49296675 tataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 49296577  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctt 1027  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||| ||||||| | ||||||||||  |||||||| |||||||    
T  49296576 ccatcccaaaaataaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaagtaatttcttcgaaaggtcaatctt 49296485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 640 - 1040
Target Start/End: Complemental strand, 53836704 - 53836317
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||| |||||||             |||||||||||||| ||||||    
T  53836704 aaggttttgcaacttgagagtttacctcgactcgttttatctagataaactcgactcgaaaactcg-------------tacgagtttacctaaaattaa 53836618  T
Q  740 aattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagt 839  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  53836617 aattttatacaatttattatatgcatacatatctaagctaatataatactgtaaaaatatcaatagtgaaaaatatagacttac-ttataaatgcaaagt 53836519  T
Q  840 ataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaac 939  Q
    ||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |    
T  53836518 ataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctacc 53836420  T
Q  940 catcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggtt 1036  Q
    |||||||||||  ||||||||| ||||||| || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| |||    
T  53836419 catcccaaaaaggaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagtt 53836321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 639 - 840
Target Start/End: Complemental strand, 8599716 - 8599515
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||     
T  8599716 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgcacgagtttacctaaaattg 8599617  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  8599616 aaattttatacaatttattatatgcatgatatatgtaagctaatataatactgtaaaaagatcaataatgaaaaatatagactta-attataaatgcaaa 8599518  T
Q  838 gta 840  Q
    |||    
T  8599517 gta 8599515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 643 - 850
Target Start/End: Original strand, 22488419 - 22488618
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||        ||| ||||||||||||||||||||||| |||| ||||    
T  22488419 gttttacaactcgagagtttacctcaactcgttttacctagttaaactcgactcg--------aattgtaaactcgtacgagtttacctaaaattgaaat 22488510  T
Q  743 tttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtat 841  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  22488511 tttatacaatttattatatgcatgacatatgtaagctaatataatattgtaaaaagatcaaaagtgaaaaatatagactta-attataaatgcaaagtat 22488609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 641 - 815
Target Start/End: Original strand, 7436859 - 7437034
Alignment:
Q  641 aggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaa 740  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||    
T  7436859 aggttttgcaactcgagagtttacctcaactcgttttgcttaggtaaactcgactcgtaaactcgactcgagaactcgtacgagtttacctaaaattaaa 7436958  T
Q  741 attttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||| |||| |||||||||||||||| |||||| ||||||||||||||| |||||| |  ||||||||| |||||||    
T  7436959 attatataaaatttattatatgcatgacatatataagctaatataatattgtaaataagtcaatagtgcaaaatat 7437034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 638 - 854
Target Start/End: Complemental strand, 33694071 - 33693856
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||||||||||||| |||||||||| |  | ||||||||||||||||||||| | |||  |||||||||||||||||| | ||||    
T  33694071 gcaaggttttgcaactcgagagtttaccttaactcgttttgctaatgtaaactcgactcgtaaactcaactcgagaactcgtacgagtttaccaaaaatt 33693972  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
    |||||| |||| |||||||||||||||| |||||| ||||||||||||||| |||||| ||  |||||||| ||||||| ||||||  ||| ||| ||||    
T  33693971 aaaattatataaaatttattatatgcatgacatatataagctaatataatattgtaaatagggcaatagtgcaaaatat-gactta-attacaaaggcaa 33693874  T
Q  837 agtataccaaaccatcat 854  Q
    | |||||||||| |||||    
T  33693873 attataccaaactatcat 33693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 639 - 783
Target Start/End: Original strand, 9817992 - 9818136
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||    
T  9817992 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgactcgtaaactcgtacgag-ttacctaaaatta 9818090  T
Q  739 aaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    ||||| |||| ||||||||||||  ||| |||||||||||||||||    
T  9818091 aaattatataaaatttattatatatatagcatatgtaagctaatat 9818136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 49459169 - 49458990
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||| | |||||||||||| || |||  || ||||||||||||||||| |||||    
T  49459169 caaggttttgcaactcgagagtttacctcaactcgtttcgtctaggtaaatttgactcgtaaacttgactcgagaattcgtacgagtttacctaaaatta 49459070  T
Q  739 aaattttatacaatttattatatgca---tacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||    | |||| ||||||||||||||| |||||| || ||||||||| |||||||    
T  49459069 aaattatataaaatttattatatgcaagccatatatataagctaatataatattgtaaataggtcaatagtgcaaaatat 49458990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 639 - 783
Target Start/End: Original strand, 47466818 - 47466962
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||| |||||||||||| | ||||||||||||||||||||||| |||||    
T  47466818 caaggttttacaactcgagagtttatctcaactcgttttagctatgtaaactcgaatcgtaaactcgacttgtaaactcgtacgagtttacctaaaatta 47466917  T
Q  739 aaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    ||||| | || ||||||||||||  ||| |||||||||||||||||    
T  47466918 aaattat-taaaatttattatatatatagcatatgtaagctaatat 47466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 638 - 783
Target Start/End: Complemental strand, 27262042 - 27261896
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatc-gtaaactcgtacgagtttacctagaat 736  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||| || ||||||||||||||||||||||| |||    
T  27262042 gcaaggttttacaactcgagagtttacctcaactcgttttagctatgtaaacttgaatcgtaaactcgactcagtaaactcgtacgagtttacctaaaat 27261943  T
Q  737 taaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    | ||||| |||| ||||||| ||||  || ||||||||||||||||||    
T  27261942 t-aaattatataaaatttatgatatatataacatatgtaagctaatat 27261896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 43173682 - 43173518
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||| ||             |||||||| || |||||    
T  43173682 caaggttttgcaactcgagagtttacctcaactcgttttatttaggtaaactcgactcgagaactcgtat-------------gagtttacataaaatta 43173596  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||  ||| |||||||||||||||| |||| | ||||||||||||||| |||||| || ||||||||| |||||||    
T  43173595 aaattacataaaatttattatatgcatgacatgtataagctaatataatattgtaaataggtcaatagtgcaaaatat 43173518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 653 - 816
Target Start/End: Original strand, 30237912 - 30238076
Alignment:
Q  653 tcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaat 752  Q
    ||||||||| | ||||||| |||||||||| ||||| ||||    ||||||||| | ||||| | ||||||||||||||| |||||||| | |||| |||    
T  30237912 tcgagagttcagctcaacttgttttacctatgtaaattcgaactataaactcgacttgtaaatttgtacgagtttacctaaaattaaaagtatataaaat 30238011  T
Q  753 ttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    ||||||||| | | |||||||| ||||||||||||| || ||| || ||||||||| ||||||||    
T  30238012 ttattatatacaagacatatgttagctaatataatattgcaaataggtcaatagtgcaaaatata 30238076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 639 - 815
Target Start/End: Original strand, 4962024 - 4962186
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||  |||| ||              |||||||||||| |||||    
T  4962024 caaggttttgcaactctagagtttacctcaacttgtttg-cctaggtaaactcgactcgagaacttga--------------cgagtttacctaaaatta 4962108  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||| |||||| ||||||||||||||| |||||| || |||||| || |||||||    
T  4962109 aaattatataaaatttattatatgcatgacatatataagctaatataatattgtaaataggtcaataatgcaaaatat 4962186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 653 - 753
Target Start/End: Complemental strand, 32766705 - 32766605
Alignment:
Q  653 tcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaat 752  Q
    ||||||||||||||||| |||||||  ||| ||| ||||||||||||||||||| | |  |||||||||||||||||||| |||||||||| |||| |||    
T  32766705 tcgagagtttacctcaattcgttttgtctatgtatactcgactcgtaaactcgacttgagaactcgtacgagtttacctaaaattaaaattatataaaat 32766606  T
Q  753 t 753  Q
    |    
T  32766605 t 32766605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 697 - 931
Target Start/End: Complemental strand, 1666624 - 1666392
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    ||||| |||| ||| ||||||||||||||||| ||| ||| |||||| | || |||||||||||||||| | |||| ||| ||||||||||| ||||||     
T  1666624 gtaaattcgactcgaaaactcgtacgagtttatctaaaatgaaaattatgtaaaatttattatatgcatgaaatatataacctaatataatattgtaaat 1666525  T
Q  796 agatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaat 895  Q
    || |||||| || ||||||| ||| ||| ||| ||| | ||| |||| ||||| |||||        |  |||||||||||||| ||||||||| ||||     
T  1666524 aggtcaataatgtaaaatat-gacatac-ttacaaaggtaaattataacaaactatcattataaaa-tattatgcttaacttagcatcaaaatacaaaaa 1666428  T
Q  896 ttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    ||||| ||||||| | || |||||||||||||||||    
T  1666427 ttaacgcacaaaatcataagtttcataagtctctaa 1666392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 697 - 804
Target Start/End: Complemental strand, 24064039 - 24063932
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| |||  |||||||| ||||||||||| |||||||||| |||| |||||||||||||||  |||||| ||||||||||||||| ||||||     
T  24064039 gtaaactcgactcgagaactcgtatgagtttaccta-aattaaaattatataaaatttattatatgcacgacatatataagctaatataatattgtaaac 24063941  T
Q  796 agatcaata 804  Q
    | |||||||    
T  24063940 atatcaata 24063932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 639 - 807
Target Start/End: Complemental strand, 25932206 - 25932038
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||||| |||||||||| ||||||||||||  || ||||||||||||| ||||  || |||||  ||||||||||||||||| || |   |    
T  25932206 caaggttttacaacttgagagtttacttcaactcgttttgtctgggtaaactcgacttgtaatttcaaatcgagaactcgtacgagtttacttaaa---a 25932110  T
Q  739 aaattttatacaatttattatatgc---atacatatgtaagctaatataatactgtaaaaagatcaatagtg 807  Q
    | ||| |||| |||||||||||| |   ||| |||| ||||||||||||||| |||||| |  |||||||||    
T  25932109 atattatataaaatttattatatacatgatatatatataagctaatataatattgtaaatatgtcaatagtg 25932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 639 - 705
Target Start/End: Original strand, 53644751 - 53644817
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  53644751 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaattcgaatcgtaaactcg 53644817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 420
Target Start/End: Complemental strand, 1156223 - 1156156
Alignment:
Q  353 aaccgattgaaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaaa 420  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||    
T  1156223 aaccgtttcaaaactcctcttgatgatttggaggaaaaagttgtcactattggcaccgaagaggtaaa 1156156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 697 - 783
Target Start/End: Complemental strand, 40064884 - 40064798
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    |||||||||||||||||||||||||||||||| | | |||| ||||| |||| ||||||||||||  || ||||||||||||||||||    
T  40064884 gtaaactcgaatcgtaaactcgtacgagtttatccaaaatt-aaattatataaaatttattatatatataacatatgtaagctaatat 40064798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 640 - 697
Target Start/End: Complemental strand, 25050352 - 25050295
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||    
T  25050352 aaggttttacaactcgagagtttacctcaactcgttttgcccaagtaaactcgactcg 25050295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 652 - 705
Target Start/End: Complemental strand, 37833463 - 37833410
Alignment:
Q  652 ctcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  37833463 ctcgagagtttacctcaactcgttttaactatgtaaactcgaatcgtaaactcg 37833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 45731406 - 45731341
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||  ||||||||||||||||||||||||||||| ||| |||||||||| | |||||||||    
T  45731406 aaggttttataactcgagagtttacctcaactcgttttagctatgtaaactcgaattgtaaactcg 45731341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 703 - 783
Target Start/End: Original strand, 53644802 - 53644882
Alignment:
Q  703 tcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||| |||||||||||   || ||||||||||||||||||    
T  53644802 tcgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaatttattatacatataacatatgtaagctaatat 53644882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 697 - 761
Target Start/End: Complemental strand, 27163092 - 27163028
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    ||||| |||| |||||||||||||| |||||||||| |||||||||| |||| ||||||||||||    
T  27163092 gtaaattcgactcgtaaactcgtacaagtttacctaaaattaaaattatataaaatttattatat 27163028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 783
Target Start/End: Complemental strand, 37833431 - 37833345
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    ||||||||||||||||||||||||| | || ||||| |||| ||||| |||| ||||||||||||  || ||||||||||||||||||    
T  37833431 gtaaactcgaatcgtaaactcgtacaaattaacctaaaatt-aaattatataaaatttattatatatataacatatgtaagctaatat 37833345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 783
Target Start/End: Complemental strand, 49294339 - 49294253
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    |||||||||||||||||||| ||||||||||| ||| |||| ||||| |||| ||||||| ||||  || ||||||||||||||||||    
T  49294339 gtaaactcgaatcgtaaacttgtacgagtttatctaaaatt-aaattatataaaatttatcatatatataacatatgtaagctaatat 49294253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 640 - 697
Target Start/End: Complemental strand, 7667520 - 7667463
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||| ||||| ||||||||||||||||||||||| | || ||||||||||||||    
T  7667520 aaggttttacaacttgagagtttacctcaactcgttttgcttaagtaaactcgactcg 7667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 656 - 697
Target Start/End: Complemental strand, 24064067 - 24064026
Alignment:
Q  656 agagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  24064067 agagtttacctcaactcgttttgcctaggtaaactcgactcg 24064026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 705
Target Start/End: Complemental strand, 40064925 - 40064863
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||| |||| ||||||||||||||||||||||||||||    ||||||||||||| |||||||||||    
T  40064925 caagcttttacaactcgagagtttacctcaactcgttt----taggtaaactcgaatcgtaaactcg 40064863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 638 - 697
Target Start/End: Original strand, 21385806 - 21385865
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||| |||| |||| ||||||||||||||||||||||||| | ||| |||||||||||||    
T  21385806 gcaaagtttcgcaattcgagagtttacctcaactcgttttgcttagataaactcgactcg 21385865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 697 - 748
Target Start/End: Complemental strand, 45731362 - 45731311
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttata 748  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||| ||||    
T  45731362 gtaaactcgaattgtaaactcgtatgagtttacctaaaattaaaattatata 45731311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 734 - 799
Target Start/End: Complemental strand, 1545327 - 1545261
Alignment:
Q  734 aattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagat 799  Q
    ||||||||||  ||| |||||||||||||||| ||||||||||| |||||||||| |||||| ||||    
T  1545327 aattaaaattacatataatttattatatgcatgacatatgtaagttaatataatattgtaaacagat 1545261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 674 - 748
Target Start/End: Complemental strand, 29650914 - 29650840
Alignment:
Q  674 ttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttata 748  Q
    ||||| ||| |||||||||| | |||||||||| | |||||||||||||| | |||||| |||||||||| ||||    
T  29650914 ttttatctatgtaaactcgaattgtaaactcgatttgtaaactcgtacgaatgtacctaaaattaaaattatata 29650840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 720 - 815
Target Start/End: Complemental strand, 25050285 - 25050189
Alignment:
Q  720 acgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||||||||||| |||||| |||  ||| |||||||||| | ||| |||||||||| ||||||||||| |||||| ||  ||||| || |||||||    
T  25050285 acgagtttacctaaaattaatattaaataaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtccaatactgtaaaatat 25050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 703
Target Start/End: Complemental strand, 49294367 - 49294320
Alignment:
Q  656 agagtttacctcaactcgttttacctaggtaaactcgactcgtaaact 703  Q
    |||||||||||||||||||||||  || |||||||||| |||||||||    
T  49294367 agagtttacctcaactcgttttagttatgtaaactcgaatcgtaaact 49294320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 787
Target Start/End: Original strand, 9030500 - 9030554
Alignment:
Q  734 aattaaaattttatacaatttattatatgcat-acatatgtaagctaatataata 787  Q
    |||||||||| |||| |||||||||||| ||| ||||| ||||||||||||||||    
T  9030500 aattaaaattatataaaatttattatatccatgacataagtaagctaatataata 9030554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 21386012 - 21386077
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| |||||||   || |||||||||||||||||    
T  21386012 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaataataagtttcataagtctctaa 21386077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 49458942 - 49458877
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||||||| | ||  ||||||||||||||||    
T  49458942 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataaatttcataagtctctaa 49458877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 272; Significance: 1e-151; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 8 - 622
Target Start/End: Complemental strand, 22633124 - 22632524
Alignment:
Q  8 agtatagatgagttgaatgtaaataaatatttgatatcaatagaggctaagaacaggcttgttgatccttgcattgccccacagttgaagttaagcaagc 107  Q
    ||||||| ||| ||| ||| |||  ||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  22633124 agtatagttgatttggatgaaaaccaatatttgacatcaatggaagctaagaacaggcttgttgatccttgcatttccccacagttgaagttaagcaagt 22633025  T
Q  108 cggtattaccaattcttgaacctggtgttcatgaatattatggttatgttgaaagtaataggactattcatgttcaaattttcaaacctgatgttgatat 207  Q
    || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||     
T  22633024 cgatattaccaattcttaaacctggtgttcataaatattatggttatgttgaaagtaatagtattattcatgttcaaattttcaaaactgatgtagataa 22632925  T
Q  208 gag---ttatgctggaaattttcagaaaatgaatttatctactgaggtgattcctggtgatggttatgtcaagggtccagctatgtattttgctacagat 304  Q
    ||    || |||||||| | ||  | || ||||||||  |  || ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  22632924 gaccatttgtgctggaagtattacggaactgaatttacgttatggggtgaatcctggtgaggattatgtcaagggtccagctatgtattttgctacagat 22632825  T
Q  305 gatttggtt---gtagcacccttaactcctatttcagctttgggtttattaaaccgattgaaaactcctcttgatgatttgaaggaaaaagttgtcacta 401  Q
    |||||||||   |||||||| || ||||| |||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||| |    
T  22632824 gatttggttaatgtagcaccattgactccaatttcagctttgggtttacttaaccgactgaaaactcctcttaatgatttgaaggaaaaagttgtcacca 22632725  T
Q  402 ttggcatcaaggaggtaaaccatag--taaaatttatattagatttttaatcttcacattatttaaatcttttactatgagctaatttctctattgctta 499  Q
    |||||| ||||||||||||||||||  || ||||||||||| ||||||||| ||||||||||| | ||||                     |||||||||    
T  22632724 ttggcaccaaggaggtaaaccatagtatataatttatattaaatttttaattttcacattattcatatct---------------------tattgctta 22632646  T
Q  500 tgtttcactttttgtcttgatgtagtgtcttagcatattgaaggctgctttgacttcaacttctgccctaacaactggtttggctcacatgttacatgaa 599  Q
    |||||  ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |  ||||    
T  22632645 tgtttaccttattgtcttg-tgcagtgtcttagcatattgaaggctgctttgacttcaacttctgctctaacaaatggtttggctcacatgtgaactgaa 22632547  T
Q  600 gttaaggaagagaaatgaaaaga 622  Q
    |||||||| ||||||||||||||    
T  22632546 gttaaggaggagaaatgaaaaga 22632524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 639 - 1040
Target Start/End: Original strand, 4639219 - 4639616
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  4639219 caaggttttgcaactcgagagtttacctcaactcgttttaactaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 4639318  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||| ||||||||    
T  4639319 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagac-----ttatatatgcaaag 4639413  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    || ||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  4639414 taaaccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 4639512  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggt 1035  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||    
T  4639513 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagt 4639611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 467
Target Start/End: Original strand, 22626046 - 22626517
Alignment:
Q  8 agtatagatgagttgaatgtaaataaatatttgatatcaatagaggctaagaacaggcttgttgatccttgcattgccccacagttgaagttaagcaagc 107  Q
    ||||||| ||| ||| ||| |||  ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22626046 agtatagttgatttggatgaaaaccaatatttgacatcaatggaagctaagaacaggcttgttgatccttgcattgccccacagttgaagttaagcaagc 22626145  T
Q  108 cggtattaccaattcttgaacctggtgttcatgaatattatggttatgttgaa------------agtaataggactattcatgttcaaattttcaaacc 195  Q
     | | |||||||||||||| |||||||||| |||||| ||||||||| |||||            |||||||  | ||| || |||||||||||||||||    
T  22626146 agattttaccaattcttgatcctggtgttcttgaatactatggttattttgaaggcgttgttaccagtaataatattatccaggttcaaattttcaaacc 22626245  T
Q  196 tgatgttgatatgagttatgctggaaattttcagaaaatgaatttatctactgaggtgattcctggtgatggttatgtcaagggtccagctatgtatttt 295  Q
    || ||| |||| ||| ||||||||||||||| ||||| |||||| ||| | ||   ||| ||||| ||| |||||||| ||||||||||||||||||||     
T  22626246 tggtgtagataagagctatgctggaaattttaagaaactgaattcatcgaatgtcatgaatcctgttgacggttatgttaagggtccagctatgtatttc 22626345  T
Q  296 gctacagatgatttggttgtagcacccttaactcctatttcagctttgggtttattaaaccgattgaaaactcctcttgatgatttgaaggaaaaagttg 395  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||||| | ||||| ||||| ||||||||| |||| |||||||||||||||     
T  22626346 gctacagatgatctggttgtagcacccttaactccaatctcagctttgggtttacttaaccgtttgaatactcctcttaatgaattgaaggaaaaagtta 22626445  T
Q  396 tcactattggcatcaaggaggtaaaccatagtaaaatttatattagatttttaatcttcacattatttaaat 467  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||    
T  22626446 tcacaattggcatcaaggaggtaaagcatagtaaaatttatattagattttaaatcttcagtttatttaaat 22626517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 639 - 994
Target Start/End: Original strand, 37915398 - 37915754
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||     
T  37915398 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaacttgaatcgtaaactcgtacgaatttacctaaaattg 37915497  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||    
T  37915498 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgt-aaaagatcaatagttaaaaatatagactta-attataaatgcaaa 37915595  T
Q  838 gtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtct- 936  Q
    ||||||||||| | |||        |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||     
T  37915596 gtataccaaactaccataaaaaaa-tggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcatagatttcataagtctttaaagtctg 37915694  T
Q  937 aaccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatccaaaaa 994  Q
      |||||||||||| |||||||||| ||||| | || |||||||||||||||||||||||    
T  37915695 gcccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaa 37915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 684 - 1040
Target Start/End: Complemental strand, 14742166 - 14741810
Alignment:
Q  684 gtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagctaatat 783  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  14742166 gtaaactcgaatcgtaaactcgaatcgtaaactcgtacgagtttacttaaaattgaaattttatacaatttattatatgtatacatatgtaaactaatat 14742067  T
Q  784 aatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatc 883  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||       ||||||||||||||||||||||    
T  14742066 aatactgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaagtataccaaaccaccat-aaaaaagtggtatgcttaacttagtatc 14741969  T
Q  884 aaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaaccatcccaaaaacaaagtttcac-agtttat-aatttgagaataa 981  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| | || ||||||||||    
T  14741968 aaaatagaaaaattaacacacaaaaacataggtttcataagtctctaaagtctacccatcccaaaaagaaagtttcacaagtttctaaacttgagaataa 14741869  T
Q  982 aactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggttccat 1040  Q
    |||||||| ||||||| | || |||||||  |||||||| ||||| |||||| |||||||    
T  14741868 aactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagttccat 14741810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 638 - 783
Target Start/End: Complemental strand, 21024736 - 21024590
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  21024736 gcaaggttttacaactcgagagtttacctcaactagttttagctatgtaaactcgaatcgtaaactcgactcgtaaactcgtacgagtttacctaaaatt 21024637  T
Q  738 aaaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    |||||| |||| ||||||||||||  ||| |||||||||||||||||    
T  21024636 aaaattatataaaatttattatatatatagcatatgtaagctaatat 21024590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 640 - 854
Target Start/End: Original strand, 5771484 - 5771695
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||| ||||||||||||||||| |||| |    
T  5771484 aaggttttgcaactcaagaatttacctcaactcgttttgcctaggtaaacttgactcgtaaactcgactcgaaaattcgtacgagtttacctaaaattga 5771583  T
Q  740 aattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||| |||| || ||||||||||||| |||||| ||||||||||| |||  ||||| || ||||||||||||||||| ||||||  ||| ||| |||||     
T  5771584 aattatata-aaattattatatgcatgacatatataagctaatat-atatggtaaataggtcaatagtgaaaaatat-gactta-attacaaaggcaaat 5771679  T
Q  839 tataccaaaccatcat 854  Q
    |||||||||| |||||    
T  5771680 tataccaaactatcat 5771695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 643 - 761
Target Start/End: Complemental strand, 35314194 - 35314076
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| ||||| |||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  35314194 gttttacaacttgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgactcgtaaactcgtatgagtttacctaaaattaaaat 35314095  T
Q  743 tttatacaatttattatat 761  Q
    | |||| ||||||||||||    
T  35314094 tatataaaatttattatat 35314076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 494 - 626
Target Start/End: Original strand, 22626569 - 22626701
Alignment:
Q  494 tgcttatgtttcactttttgtcttgatgtagtgtcttagcatattgaaggctgctttgacttcaacttctgccctaacaactggtttggctcacatgtta 593  Q
    |||||||||||  ||| ||  |||| || ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  22626569 tgcttatgtttaccttatttacttgctgcagtgtcttagcatattgaaggcttctttgacatcaacatctgccctaacaaatggtttggctcacatgtta 22626668  T
Q  594 catgaagttaaggaagagaaatgaaaagagttt 626  Q
      |||||||||||| ||||||||||||||||||    
T  22626669 actgaagttaaggaggagaaatgaaaagagttt 22626701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 639 - 794
Target Start/End: Complemental strand, 43172877 - 43172721
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| |||||||| || |||  |||||||||||| ||| ||| ||| |    
T  43172877 caaggttttacaactcgagagtttacctcaactcattttgcctaggtaaactcgacccgtaaacttgagtcgagaactcgtacgagattatctaaaataa 43172778  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    ||||| |||| || ||||||||||||| |||||| |||||||| |||||| ||||||    
T  43172777 aaattatataaaaattattatatgcatgacatatataagctaaaataatattgtaaa 43172721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 266 - 419
Target Start/End: Original strand, 23366875 - 23367028
Alignment:
Q  266 ggttatgtcaagggtccagctatgtattttgctacagatgatttggttgtagcacccttaactcctatttcagctttgggtttattaaaccgattgaaaa 365  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||   ||||||||||  |||| ||||| || || |||||| | |||||||||||||    
T  23366875 ggttatgtcaagggtccagctatgtatgttgctactgatgatttggccatagcacccttgtctccaatttctgcattaggtttacttaaccgattgaaaa 23366974  T
Q  366 ctcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaa 419  Q
    |||||||| | ||||||||||||||   |||||| |||||| ||||||||||||    
T  23366975 ctcctcttaaggatttgaaggaaaagcatgtcaccattggcgtcaaggaggtaa 23367028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 697 - 815
Target Start/End: Original strand, 1253887 - 1254006
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||| | |||||||||||||||||||| ||| ||     
T  1253887 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatatacataagatatgtaagctaatataatattgtcaat 1253986  T
Q  796 agatcaatagtgaaaaatat 815  Q
    || ||||||||| |||||||    
T  1253987 aggtcaatagtgcaaaatat 1254006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 642 - 783
Target Start/End: Original strand, 37391892 - 37392033
Alignment:
Q  642 ggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaa 741  Q
    |||||| |||||||||||||||||||||||| |||||  || |||||||||| |||||||||||| |  |||||||||||||||||||||| |||| |||    
T  37391892 ggttttacaactcgagagtttacctcaactcattttatttatgtaaactcgaatcgtaaactcgacttataaactcgtacgagtttacctaaaatt-aaa 37391990  T
Q  742 ttttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    || |||| ||||||||||||  || ||||||||||||||||||    
T  37391991 ttatataaaatttattatatatataacatatgtaagctaatat 37392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 639 - 783
Target Start/End: Complemental strand, 38911142 - 38910998
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||| |||| |||||||||||||||||| ||||| |||||  || |||||||||| || ||||||||| ||||||||||||||||||||||||| ||||     
T  38911142 caagattttacaactcgagagtttacctaaactcattttagttatgtaaactcgaatcataaactcgactcgtaaactcgtacgagtttacctaaaatt- 38911044  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    ||||| |||| ||||||||||||  || ||||||||||||||||||    
T  38911043 aaattatataaaatttattatatatataacatatgtaagctaatat 38910998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 42611306 - 42611142
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||             |||||||||||||| |||||    
T  42611306 caaggttttacaactcgagagtttacctcaactcgttttgcctaggtaaactcgactcgagaactcg-------------tacgagtttacctaaaatta 42611220  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| | |||||||||||||| |||||| ||||||||||| ||| |||||| || ||||||||| |||||||    
T  42611219 aaattatataaagtttattatatgcatgacatatataagctaatatgatattgtaaataggtcaatagtgcaaaatat 42611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 643 - 718
Target Start/End: Complemental strand, 14742259 - 14742184
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcg 718  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14742259 gttttgcaactcaagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgactcgtaaactcg 14742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 697 - 783
Target Start/End: Original strand, 14731756 - 14731843
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||  ||| |||||||||||||||||    
T  14731756 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 14731843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 761
Target Start/End: Complemental strand, 34657295 - 34657174
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||| | ||||||||| |||||||| ||||| ||| |||||||||| |||||||||||| ||||||| |||||||| |||| ||| ||||     
T  34657295 caaggttttgcaatttgagagtttatctcaactcattttagctatgtaaactcgaatcgtaaactcgactcgtaaattcgtacgaatttatctaaaatt- 34657197  T
Q  739 aaattttatacaatttattatat 761  Q
    ||||| |||| ||||||||||||    
T  34657196 aaattatataaaatttattatat 34657174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 761
Target Start/End: Complemental strand, 6269224 - 6269107
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| ||||||||||||||  ||||||| ||||||  || |||||||| | || |||||| || | ||||||||||||||||||||||| |||||||||    
T  6269224 gttttacaactcgagagtttttctcaacttgttttat-tatgtaaactcaaatcataaacttgacttgtaaactcgtacgagtttacctaaaattaaaat 6269126  T
Q  743 tttatacaatttattatat 761  Q
    | |||| ||||||||||||    
T  6269125 tatataaaatttattatat 6269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 697 - 815
Target Start/End: Complemental strand, 21486880 - 21486761
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| |||  |||||||| ||||||| ||| |||||||||| | || |||||||||||||||| |||||| ||||||||||||||| ||||||     
T  21486880 gtaaactcgactcgagaactcgtatgagtttagctaaaattaaaattatgtagaatttattatatgcatgacatatataagctaatataatattgtaaat 21486781  T
Q  796 agatcaatagtgaaaaatat 815  Q
    |  || |||||| |||||||    
T  21486780 acgtcgatagtgcaaaatat 21486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 638 - 815
Target Start/End: Complemental strand, 23017773 - 23017608
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||| |  |||||| ||              |||||||||| ||||    
T  23017773 gcaaggttttacaactcgagagtttacctcaactcgttttgactagataaactcgacttgagaactcgtata-------------agtttacctaaaatt 23017687  T
Q  738 aaaattttatacaatttattatatgca-tacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||| |||| ||||||||||||||| |||| || |||| |||||||||| |||||| || || |||||| |||||||    
T  23017686 aaaattatataaaatttattatatgcattacagatataagttaatataatattgtaaataggtcgatagtgtaaaatat 23017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 697 - 815
Target Start/End: Original strand, 33496775 - 33496894
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    ||||| |||| || |||||||||||||||||| ||| ||||||||||  ||| |||||||||| | ||| |||||||||| ||||||||||| ||||||     
T  33496775 gtaaattcgactcataaactcgtacgagtttatctaaaattaaaattaaataaaatttattatttacatgacatatgtaaactaatataatattgtaaat 33496874  T
Q  796 agatcaatagtgaaaaatat 815  Q
    ||   ||||||| |||||||    
T  33496875 agtataatagtgcaaaatat 33496894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 522 - 615
Target Start/End: Complemental strand, 23326138 - 23326045
Alignment:
Q  522 tagtgtcttagcatattgaaggctgctttgacttcaacttctgccctaacaactggtttggctcacatgttacatgaagttaaggaagagaaat 615  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||| |||  | |||||  |||||   ||||||||||| |||||||    
T  23326138 tagtgttttagcatattgaaggctgctttgacttcaacatctgctctaacaaatggacttgctcatctgttaaccgaagttaaggaggagaaat 23326045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 713 - 815
Target Start/End: Complemental strand, 27149412 - 27149309
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaa 811  Q
    |||||||||||||||||||| |||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| |||||| ||  |||||||| |||    
T  27149412 aactcgtacgagtttacctaaaatttaaattaaattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtccaatagtgcaaa 27149313  T
Q  812 atat 815  Q
    ||||    
T  27149312 atat 27149309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 533 - 617
Target Start/End: Original strand, 23367147 - 23367231
Alignment:
Q  533 catattgaaggctgctttgacttcaacttctgccctaacaactggtttggctcacatgttacatgaagttaaggaagagaaatga 617  Q
    |||||||||||||||||| |||||||| ||||| || |||| |||| | |||||| | |||  |||||||||||| |||||||||    
T  23367147 catattgaaggctgctttaacttcaacatctgcacttacaaatggtctagctcaccttttaactgaagttaaggaggagaaatga 23367231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 725 - 807
Target Start/End: Complemental strand, 16710237 - 16710154
Alignment:
Q  725 tttacctagaattaaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtg 807  Q
    |||||||| |||||||||| |||| |||||||||||||| | |||||| |||||||||| |||| |||||| |  |||||||||    
T  16710237 tttacctaaaattaaaattatataaaatttattatatgcaagacatatataagctaataaaatattgtaaataagtcaatagtg 16710154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 639 - 682
Target Start/End: Complemental strand, 16710273 - 16710230
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttaccta 682  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  16710273 caaggttttgcaactcgagagtttacttcaacttgttttaccta 16710230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 725 - 807
Target Start/End: Complemental strand, 17684473 - 17684390
Alignment:
Q  725 tttacctagaattaaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtg 807  Q
    |||||||| |||||||||| |||| |||||||||||||| | |||||| |||||||||| |||| |||||| |  |||||||||    
T  17684473 tttacctaaaattaaaattatataaaatttattatatgcaagacatatataagctaataaaatattgtaaataagtcaatagtg 17684390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 639 - 682
Target Start/End: Complemental strand, 17684509 - 17684466
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttaccta 682  Q
    |||||||||||||||||||||||||| |||||| ||||||||||    
T  17684509 caaggttttgcaactcgagagtttacttcaacttgttttaccta 17684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 684 - 718
Target Start/End: Complemental strand, 14742192 - 14742158
Alignment:
Q  684 gtaaactcgactcgtaaactcgaatcgtaaactcg 718  Q
    |||||||||||||||||||||||||||||||||||    
T  14742192 gtaaactcgactcgtaaactcgaatcgtaaactcg 14742158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 23250488 - 23250431
Alignment:
Q  362 aaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaa 419  Q
    ||||| ||| ||||||||||| |||||||||||||||| || |||||||| |||||||    
T  23250488 aaaacacctattgatgatttggaggaaaaagttgtcaccatcggcatcaaagaggtaa 23250431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 698 - 794
Target Start/End: Original strand, 26201210 - 26201307
Alignment:
Q  698 taaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    ||||||||| |||  ||||||||| ||||||  || ||||||||||  ||| |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  26201210 taaactcgactcgagaactcgtacaagtttaggtaaaattaaaattaaataaaatttattatttacatgacatatgtaatctaatataatattgtaaa 26201307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 697 - 785
Target Start/End: Complemental strand, 31175256 - 31175167
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataa 785  Q
    ||||| |||| ||||||| ||||| ||||| |  || ||| |||||| |||| |||||||||||| ||| ||||||||||||||||||||    
T  31175256 gtaaaatcgattcgtaaattcgtaggagttaatataaaatgaaaattatataaaatttattatatacatcacatatgtaagctaatataa 31175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 23234077 - 23234021
Alignment:
Q  353 aaccgattgaaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatc 409  Q
    ||||| ||| |||||||||||  |||| |||||||||||||||||||| ||||||||    
T  23234077 aaccgtttggaaactcctcttactgatgtgaaggaaaaagttgtcactgttggcatc 23234021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 23243738 - 23243682
Alignment:
Q  353 aaccgattgaaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatc 409  Q
    ||||| ||| |||||||||||  |||| |||||||||||||||||||| ||||||||    
T  23243738 aaccgtttggaaactcctcttactgatgtgaaggaaaaagttgtcactgttggcatc 23243682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 23341522 - 23341458
Alignment:
Q  353 aaccgattgaaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggt 417  Q
    ||||| || |||||| || ||| |||| |||||||||| |||||||||||||||||||| |||||    
T  23341522 aaccgttttaaaacttctgttggtgatctgaaggaaaaggttgtcactattggcatcaaagaggt 23341458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 653 - 701
Target Start/End: Complemental strand, 31175287 - 31175239
Alignment:
Q  653 tcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaa 701  Q
    ||||||||||||||||||||||||||  |||||||| |||| |||||||    
T  31175287 tcgagagtttacctcaactcgttttatttaggtaaaatcgattcgtaaa 31175239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 23284461 - 23284414
Alignment:
Q  372 ttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaa 419  Q
    ||||| ||||| |||||||||||||||| ||||||||||| |||||||    
T  23284461 ttgataatttggaggaaaaagttgtcaccattggcatcaaagaggtaa 23284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 873 - 931
Target Start/End: Complemental strand, 21486706 - 21486648
Alignment:
Q  873 aacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    ||||||| ||||||||| |||| ||||| ||||||| | || |||||||||||||||||    
T  21486706 aacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 21486648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 23017560 - 23017495
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||  ||||||| | || |||||||||||||||||    
T  23017560 tatgctcaacttagcatcaaaatacaaaaattaatgcacaaaatcataagtttcataagtctctaa 23017495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 23354242 - 23354185
Alignment:
Q  362 aaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaa 419  Q
    |||| ||||||||||||| ||||||||||  | ||||| |||||||| ||||||||||    
T  23354242 aaaattcctcttgatgatatgaaggaaaagctcgtcaccattggcattaaggaggtaa 23354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 640 - 697
Target Start/End: Complemental strand, 27149472 - 27149415
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||| |||||  ||||||||||| |||||||||| |||| |||| |||||||||    
T  27149472 aaggttttacaacttaagagtttaccttaactcgttttgcctaagtaagctcgactcg 27149415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 31446033 - 31445976
Alignment:
Q  750 aatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagt 806  Q
    |||||||||||||||| |||||| ||||||||||||||| | |||| || ||||||||    
T  31446033 aatttattatatgcatgacatatataagctaatataatattataaatagttcaatagt 31445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 267; Significance: 1e-148; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 639 - 1040
Target Start/End: Complemental strand, 19484973 - 19484572
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  19484973 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 19484874  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  19484873 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttac-ttatatatgcaaag 19484775  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    || ||||||| | |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  19484774 taaaccaaactaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 19484676  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggt 1035  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||    
T  19484675 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagt 19484577  T
Q  1036 tccat 1040  Q
    |||||    
T  19484576 tccat 19484572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 639 - 815
Target Start/End: Original strand, 6387200 - 6387377
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||| |||||||||||||||||||||| | ||||||||||| |||| ||||||||| |||  || ||||||||||||||||| |||||    
T  6387200 caaggttttacaactcaagagtttacctcaactcgttttgcttaggtaaactccactcttaaactcgattcgagaattcgtacgagtttacctaaaatta 6387299  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||| |||||| |||| |||||||||| |||||| || | ||||||| |||||||    
T  6387300 aaattatataaaatttattatatgcatgacatatataagttaatataatattgtaaataggttaatagtgcaaaatat 6387377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 638 - 815
Target Start/End: Original strand, 8029165 - 8029330
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||             |||||||||||||||| ||||    
T  8029165 gcaaggttttgcaactcgagagtttacctcaactcgtttcgcctaggtaaactcgactcgagaact-------------cgtacgagtttacctaaaatt 8029251  T
Q  738 aaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||| |||| |||||| ||||||| | |||||| ||||||||||||||| |||||| || ||||||||| |||||||    
T  8029252 aaaattatataaaatttactatatgcaagacatatataagctaatataatattgtaaataggtcaatagtgcaaaatat 8029330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 639 - 784
Target Start/End: Original strand, 26619927 - 26620072
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||| ||||||||||||  |||||||||||   |||||||| ||||||||||||||||| |||  |||||||||||||||||||| |||||    
T  26619927 caaggttttacaattcgagagtttactacaactcgttttgtttaggtaaa-tcgactcgtaaactcgactcgagaactcgtacgagtttacctaaaatta 26620025  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatata 784  Q
    ||||| |||| ||||||||||||| || |||||| ||||||||||||    
T  26620026 aaattatataaaatttattatatggatgacatatataagctaatata 26620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 640 - 780
Target Start/End: Original strand, 27869074 - 27869215
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||||||| ||||||||||||||||| ||||||| | |||||||| |||| ||||||| |||| |||  |||||| ||||||||||||| || |||    
T  27869074 aaggttttgcaattcgagagtttacctcaattcgttttgcttaggtaaattcgattcgtaaattcgactcgagaactcgaacgagtttacctaaaaataa 27869173  T
Q  740 aattttatacaatttattatatgcat-acatatgtaagctaa 780  Q
    |||| |||| |||||||||||||||| |||||| ||||||||    
T  27869174 aattatataaaatttattatatgcatgacatatataagctaa 27869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 815
Target Start/End: Original strand, 27974266 - 27974442
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    ||||||||| |||||||||||||||||||| |  ||||  |||||||||||||||| |||||||||| |||  ||||||||  |||||||||| ||||||    
T  27974266 aaggttttgtaactcgagagtttacctcaatttattttgtctaggtaaactcgacttgtaaactcgactcgagaactcgtataagtttacctaaaattaa 27974365  T
Q  740 aattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||| |||| ||   ||||||||||| |||||| |||||||| |||||| |||||| || | ||||||| |||||||    
T  27974366 aattatataaaaaaaattatatgcatgacatatataagctaacataatattgtaaataggttaatagtgtaaaatat 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 815
Target Start/End: Original strand, 28031535 - 28031711
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    ||||||||| |||||||||||||||||||| |  ||||  |||||||||||||||| |||||||||| |||  ||||||||  |||||||||| ||||||    
T  28031535 aaggttttgtaactcgagagtttacctcaatttattttgtctaggtaaactcgacttgtaaactcgactcgagaactcgtataagtttacctaaaattaa 28031634  T
Q  740 aattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||| |||| ||   ||||||||||| |||||| |||||||| |||||| |||||| || | ||||||| |||||||    
T  28031635 aattatataaaaaaaattatatgcatgacatatataagctaacataatattgtaaataggttaatagtgtaaaatat 28031711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 637 - 816
Target Start/End: Complemental strand, 42423996 - 42423829
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaat 736  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||  ||||||             |||||||||||||| |||    
T  42423996 tgcaaggttttgcaacttgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaactcg-------------tacgagtttacctaaaat 42423910  T
Q  737 taaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    ||||||| |||  |||||||||||||| | ||| ||||||||||||||| || |||||| || |||||| || ||||||||    
T  42423909 taaaattatattaaatttattatatgcaagacacatgtaagctaatatattattgtaaataggtcaataatgcaaaatata 42423829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 639 - 812
Target Start/End: Complemental strand, 18985119 - 18984958
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||  |||||| |             |||||||||||| |||||    
T  18985119 caaggttttgcaactcgagagtttacctcaacttgttttgtctaggtaaacttgactcgagaactcgca-------------cgagtttacctaaaatta 18985033  T
Q  739 aaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaa 812  Q
    ||||| |||| |||||||||| ||| | |||||| ||||||||||||||| |||||| || ||||||||| ||||    
T  18985032 aaattatataaaatttattatgtgcaagacatatataagctaatataatattgtaaataggtcaatagtgtaaaa 18984958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 41394652 - 41394488
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||             |||||||||||  | ||||     
T  41394652 caaggttttacaactcgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaactcg-------------tacgagtttacaaaaaattt 41394566  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||| |||| | ||| ||||||||||| |||||| || ||||||||| |||||||    
T  41394565 aaattatataaaatttattatatgcatgacatgtataacctaatataatattgtaaataggtcaatagtgcaaaatat 41394488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 697 - 815
Target Start/End: Original strand, 4870523 - 4870642
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||| | | |||||||||||| || |||||| || ||||    
T  4870523 gtaaacttgaatcgtaaactcgtacgagtttacctaaaattaatattatataaaatttattatatacgtgacatatgtaagccaacataatattgcaaaa 4870622  T
Q  796 agatcaatagtgaaaaatat 815  Q
    || || || ||| |||||||    
T  4870623 aggtcgattgtgcaaaatat 4870642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 815
Target Start/End: Complemental strand, 24082972 - 24082814
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||             | |  |||||||||||||||||||| |||||| ||    
T  24082972 gttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgac-------------tagagaactcgtacgagtttacctaaaattaatat 24082886  T
Q  743 tttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    | |||| |||||||||||||||| |||||  |||| |||||||||| |||||| ||  ||||| || |||||||    
T  24082885 tatataaaatttattatatgcatgacata--taagttaatataatattgtaaataggccaataatgcaaaatat 24082814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 640 - 815
Target Start/End: Original strand, 12737396 - 12737560
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||  || |||             |||||||| ||||| ||| ||    
T  12737396 aaggttttacaattcgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaagtcg-------------tacgagttaacctaaaatgaa 12737482  T
Q  740 aattttatacaa-tttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||| |||| || |||||||||||||| |||||| ||||||||||||||| |||||| | |||||||||| |||||||    
T  12737483 aattatataaaaatttattatatgcatgacatatataagctaatataatattgtaaatatatcaatagtgcaaaatat 12737560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 33177259 - 33177335
Alignment:
Q  710 gtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataa 785  Q
    |||||||||||| |||||||||| |||||||||| |||| |||||||||||| ||| |||||||||| |||||||||    
T  33177259 gtaaactcgtaccagtttacctaaaattaaaattatataaaatttattatatacatgacatatgtaaactaatataa 33177335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 640 - 697
Target Start/End: Complemental strand, 44977529 - 44977472
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||| ||||||||    
T  44977529 aaggttttgcaactcgagagtttacttcaactcgttttgcttaggtaaattcgactcg 44977472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 697 - 804
Target Start/End: Original strand, 12521764 - 12521871
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| |||  ||||||| |||||||||||| |||||||||| |||| |||||||| ||| |||  ||||| ||||||||||| ||| ||||||     
T  12521764 gtaaactcgattcgagaactcgtgcgagtttacctaaaattaaaattatata-aatttattttattcatggcatatataagctaatatgatattgtaaat 12521862  T
Q  796 agatcaata 804  Q
    |||||||||    
T  12521863 agatcaata 12521871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 848
Target Start/End: Original strand, 27876479 - 27876600
Alignment:
Q  726 ttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttact 824  Q
    ||||||| ||| |||||| |||| |||||||||||||||| |||||| ||||||||||||||| | |||  || ||||||||| ||||||| ||||||      
T  27876479 ttacctaaaataaaaattatataaaatttattatatgcatgacatatataagctaatataatattataagtaggtcaatagtgtaaaatat-gactta-a 27876576  T
Q  825 ttataaatgcaaagtataccaaac 848  Q
    ||| ||| ||||| ||||||||||    
T  27876577 ttacaaaagcaaattataccaaac 27876600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 848
Target Start/End: Original strand, 28016660 - 28016781
Alignment:
Q  726 ttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttact 824  Q
    ||||||| ||| |||||| |||| |||||||||||||||| |||||| ||||||||||||||| | |||  || ||||||||| ||||||| ||||||      
T  28016660 ttacctaaaataaaaattatataaaatttattatatgcatgacatatataagctaatataatattataagtaggtcaatagtgtaaaatat-gactta-a 28016757  T
Q  825 ttataaatgcaaagtataccaaac 848  Q
    ||| ||| ||||| ||||||||||    
T  28016758 ttacaaaagcaaattataccaaac 28016781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 693
Target Start/End: Original strand, 3007131 - 3007185
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcga 693  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||  ||||||||    
T  3007131 caaggttttacaactcgagagtttacctcaactcgttttgcctagcaaaactcga 3007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 743
Target Start/End: Complemental strand, 7761310 - 7761210
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| ||||| ||||| |||||||||||||||||   |  ||||| | ||||||||||||| | |||  |||||||||||||||| ||| |||||||||    
T  7761310 gttttacaacttgagaggttacctcaactcgttttgtttgagtaaatttgactcgtaaactcaactcgagaactcgtacgagtttatctaaaattaaaat 7761211  T
Q  743 t 743  Q
    |    
T  7761210 t 7761210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 697 - 779
Target Start/End: Complemental strand, 41252763 - 41252687
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagcta 779  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||    ||| ||||||||||||  || |||||||||||||    
T  41252763 gtaaactcgaatcttaaacttgtacgagtttacctaaaattaaaa----ataaaatttattatat--atgcatatgtaagcta 41252687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 639 - 692
Target Start/End: Original strand, 33177214 - 33177267
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 692  Q
    ||||||||| |||||||||||||||||  |||| |||||||||| |||||||||    
T  33177214 caaggttttacaactcgagagtttaccgtaacttgttttacctatgtaaactcg 33177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 807
Target Start/End: Complemental strand, 35880091 - 35879996
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtg 807  Q
    |||||||||||||||| ||| ||||||||||  ||| |||||||||| | ||| |||||||||| ||| | ||||| || ||| || |||||||||    
T  35880091 aactcgtacgagtttatctaaaattaaaattaaataaaatttattatttacatgacatatgtaaactactgtaatattgaaaatagttcaatagtg 35879996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 651 - 693
Target Start/End: Original strand, 12521731 - 12521773
Alignment:
Q  651 actcgagagtttacctcaactcgttttacctaggtaaactcga 693  Q
    |||||||||||||||||||||| |||| || ||||||||||||    
T  12521731 actcgagagtttacctcaactcattttgccaaggtaaactcga 12521773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 8029377 - 8029442
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||  ||||| ||||||| | || |||||||||||||||||    
T  8029377 tatgctcaacttagcatcaaaatacaaagattaacgcacaaaatcataagtttcataagtctctaa 8029442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 12737607 - 12737672
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||||||| | ||  ||||||||||||||||    
T  12737607 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataaatttcataagtctctaa 12737672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 267; Significance: 1e-148; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 639 - 1040
Target Start/End: Complemental strand, 41354201 - 41353800
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  41354201 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 41354102  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  41354101 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttac-ttatatatgcaaag 41354003  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    || ||||||| | |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  41354002 taaaccaaactaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 41353904  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggt 1035  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||    
T  41353903 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagt 41353805  T
Q  1036 tccat 1040  Q
    |||||    
T  41353804 tccat 41353800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 639 - 1040
Target Start/End: Complemental strand, 8148110 - 8147721
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||             |||||||||||||||||||||||||| ||||     
T  8148110 caaggttttgcaactcgagagtttacctcaactcgttttagctaggtaaactcga-------------atcgtaaactcgtacgagtttacctaaaattg 8148024  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8148023 aaattttatacaatttattatatgcatacatatgtaagctaatataataccgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaag 8147925  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    |||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  8147924 tataccaaaccaccataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 8147825  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatccaaaaa-cagaataagtaattttctcgaaagggcaatctttctaaggt 1035  Q
    |||||||||||| ||||||| || ||||| | || ||||||||||||||||||||||| || | || |||||||  |||||||| ||||| |||||| ||    
T  8147824 ccatcccaaaaagaaagttttacaagtttctaaacttgagaataaaactatccaaaaaccaaactaggtaatttcttcgaaaggtcaatc-ttctaaagt 8147726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 637 - 1040
Target Start/End: Original strand, 11578452 - 11578842
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaat 736  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||| |||    
T  11578452 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaa-------------actcgaatcgtaaactcgtacgagtttacctaaaat 11578538  T
Q  737 taaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  11578539 tgaaattttatacaatttattatatgcatacatatggaagctaatataatgctggaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaa 11578637  T
Q  837 agtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtct 936  Q
    |||||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  11578638 agtataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtct 11578736  T
Q  937 aaccatcccaaaaacaaagtttca-cagtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaag 1033  Q
    | |||||||||||| |||||||||  ||||||| || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| ||||||     
T  11578737 acccatcccaaaaagaaagtttcataagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaa 11578835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 639 - 1040
Target Start/End: Original strand, 1242637 - 1243023
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||             |||||||||||||||||||||||||||||||  ||||    
T  1242637 caaggttttgcaactcgagagtttacctcaactcgttttacctagataaa-------------ctcgaatcgtaaactcgtacgagtttacctaagatta 1242723  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1242724 aaattttatacaatttattatatgcat--atatgtaagctaatataattctgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaag 1242820  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    |||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  1242821 tataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctac 1242919  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggt 1035  Q
    |||||||||||| |||||||||| ||||| | || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||    
T  1242920 ccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagt 1243018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 638 - 926
Target Start/End: Original strand, 5208612 - 5208899
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  5208612 gcaaggttttacaactcgagagtttacctcaactcgttttacctaggtaaactcgactggtaaactcgaatcgtaaactcgtacgagtttacctaaaatt 5208711  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
     ||||||||||||||||||||| ||||| |||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||  ||||||||||||    
T  5208712 gaaattttatacaatttattatgtgcatgacatatataagctaatataatatcgtaaaaagattaatagtgaaaaatatagactta-attataaatgcaa 5208810  T
Q  837 agtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtc 926  Q
    |||||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  5208811 agtataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataagtttcataagtc 5208899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 710 - 1040
Target Start/End: Complemental strand, 26758325 - 26757994
Alignment:
Q  710 gtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaa 809  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26758325 gtaaactcgtacaagtttacctaaaattgaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaa 26758226  T
Q  810 aaatatagacttactttataaatgcaaagtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaag 909  Q
    |||||||||||||| ||||||||||||||| ||  |||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26758225 aaatatagacttac-ttataaatgcaaagtgtagaaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaag 26758128  T
Q  910 cgtaggtttcataagtctctaaagtctaaccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc--aaaaacagaataagta 1005  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| || ||||||||||||||||||  ||||||| | || |||    
T  26758127 cataggtttcataagtctctaaagtctacccatcccaaaaacaaagtttcacaaatttataaacttgagaataaaactatccataaaaacaaactaggta 26758028  T
Q  1006 attttctcgaaagggcaatctttctaaggttccat 1040  Q
    ||||  |||||||| ||||| |||||| |||||||    
T  26758027 atttcttcgaaaggtcaatc-ttctaaagttccat 26757994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 638 - 840
Target Start/End: Complemental strand, 4006129 - 4005927
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4006129 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaatt 4006030  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  4006029 gaaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgcaa 4005931  T
Q  837 agta 840  Q
    ||||    
T  4005930 agta 4005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 639 - 840
Target Start/End: Complemental strand, 9174651 - 9174450
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||     
T  9174651 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcataaactcgcacgagtttacctaaaattg 9174552  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  9174551 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgcaaa 9174453  T
Q  838 gta 840  Q
    |||    
T  9174452 gta 9174450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 637 - 840
Target Start/End: Original strand, 18246880 - 18247083
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaat 736  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||    
T  18246880 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgcacgaatttacctaaaat 18246979  T
Q  737 taaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgca 835  Q
    | ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  18246980 tgaaattttatacaatttattatatgcatgacatatataagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgca 18247078  T
Q  836 aagta 840  Q
    |||||    
T  18247079 aagta 18247083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 638 - 840
Target Start/End: Complemental strand, 51107964 - 51107762
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  51107964 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgcacgaatttacctaaaatt 51107865  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
     ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  51107864 gaaattttatacaatttattatatgcatgacatatataagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgcaa 51107766  T
Q  837 agta 840  Q
    ||||    
T  51107765 agta 51107762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 639 - 815
Target Start/End: Original strand, 49452359 - 49452536
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||| ||||||||||||   ||||||||| |||||| |||||||||| |||  |||||||||||||||||||| |||||    
T  49452359 caaggttttgcaactcgagagtttatctcaactcgtttcgtctaggtaaattcgacttgtaaactcgactcgagaactcgtacgagtttacctaaaatta 49452458  T
Q  739 aaattttatacaatttattatatgca-tacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||  |||||| |||| |||||||||| |||||| || ||||||||| |||||||    
T  49452459 aaattatataaaatttattatatgcaggacatatataagttaatataatattgtaaataggtcaatagtgcaaaatat 49452536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 638 - 783
Target Start/End: Original strand, 33886291 - 33886437
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||| |||| | ||||||||||||||||||||||| ||||    
T  33886291 gcaaggttttacaactcgagagtttatctcaactcgttttagctatgtaaactcgaatcgtaaattcgacttgtaaactcgtacgagtttacctaaaatt 33886390  T
Q  738 aaaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    |||||| |||| ||||||||||||  ||| |||||||||||||||||    
T  33886391 aaaattatataaaatttattatatatatagcatatgtaagctaatat 33886437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 638 - 783
Target Start/End: Complemental strand, 33957961 - 33957815
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||| |||| | ||||||||||||||||||||||| ||||    
T  33957961 gcaaggttttacaactcgagagtttatctcaactcgttttagctatgtaaactcgaatcgtaaattcgacttgtaaactcgtacgagtttacctaaaatt 33957862  T
Q  738 aaaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    |||||| |||| ||||||||||||  ||| |||||||||||||||||    
T  33957861 aaaattatataaaatttattatatatatagcatatgtaagctaatat 33957815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 638 - 794
Target Start/End: Complemental strand, 3594039 - 3593882
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |  || ||||||||| ||| ||| ||||    
T  3594039 gcaaggttttacaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaacttgacttgagaattcgtacgagattatctaaaatt 3593940  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    |||||| |||| || ||||||||||||| |||||| |||||||| |||||| ||||||    
T  3593939 aaaattatataaaaattattatatgcatgacatatataagctaaaataatattgtaaa 3593882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 639 - 783
Target Start/End: Complemental strand, 30177032 - 30176888
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||| |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||| |  |||||||||||||||||||||| ||||     
T  30177032 caaggttttacaattcgagaatttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgacttataaactcgtacgagtttacctaaaatt- 30176934  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    ||||| || | ||||||||||||  || ||||||||||||||||||    
T  30176933 aaattataaaaaatttattatatatataacatatgtaagctaatat 30176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 7799202 - 7799102
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||| |||||||||||||||||||||||||||||| |||  ||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  7799202 gcaaggttttacaactcgagagtttacctcaactcgttttagctatataaactcgaatcgtaaactcgactcgtaaacttgtacgagtttacctaaaatt 7799103  T
Q  738 a 738  Q
    |    
T  7799102 a 7799102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 638 - 815
Target Start/End: Complemental strand, 19863693 - 19863516
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||||||| || ||||| |||||||   ||| |||| |  ||||||||| | || |||  |||||||||||||||| ||| ||||    
T  19863693 gcaaggttttgcaactcgagagtctatctcaattcgttttgtttagataaatttaactcgtaaatttgattcgagaactcgtacgagtttaactaaaatt 19863594  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||| |||| |||| ||||||||||| |||||  ||||||||||||||| |||||| |||||||||||| |||||||    
T  19863593 aaaattatataaaatt-attatatgcatgacatacataagctaatataatattgtaaatagatcaatagtgtaaaatat 19863516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 639 - 787
Target Start/End: Original strand, 50037953 - 50038101
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| || ||||||||||||||| | ||||||||||||| |||| ||||| |||||||||  | |||||||||| ||| |||||||||| |||||    
T  50037953 caaggttttacagctcgagagtttaccttatctcgttttacctatgtaagctcgaatcgtaaact-tactcgtaaactcttacaagtttacctaaaatta 50038051  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataata 787  Q
    ||||| |||| |||||||||||| ||| |||||||||||||  |||||||    
T  50038052 aaattatataaaatttattatatacatgacatatgtaagctggtataata 50038101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 638 - 815
Target Start/End: Original strand, 47370881 - 47371045
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||             |||  |||||||||||||||||||| ||||    
T  47370881 gcaaggttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgac-------------tcgagaactcgtacgagtttacctaaaatt 47370967  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||| |||| |||||||||||||||| |||||| | || |||||||||| |||||| |  |||||| || |||||||    
T  47370968 aaaattatataaaatttattatatgcatgacatatat-agttaatataatattgtaaatatgtcaataatgcaaaatat 47371045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 25254329 - 25254166
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  |||| |             |||||||||||||| |||||    
T  25254329 caaggttttacaactcgagagtttacttcaactcgttttacctaggtaaactcgactcgagaacttg-------------tacgagtttaccta-aatta 25254244  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||||| |||||| |||||| ||||||||||||||| |  |||||| || |||||||    
T  25254243 aaattatataaaatttattatatgcatgacatatataagctgatataatactgtaaataagtcaatattgcaaaatat 25254166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 650 - 927
Target Start/End: Original strand, 32759389 - 32759665
Alignment:
Q  650 aactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaatt-ttata 748  Q
    ||||||||| ||||||||||||||||||  ||| ||||| |||||||||| |||||| |||  || |||||||| |||||||| ||| ||||||  ||||    
T  32759389 aactcgagaatttacctcaactcgttttgtctaagtaaattcgactcgtacactcgactcgagaattcgtacgaatttacctaaaataaaaattaatata 32759488  T
Q  749 caatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaa 847  Q
     |||||||||||||| | | |||| |||||||||||||||  ||||| || ||||||||  ||||||| ||||||  ||| ||| ||||| |||||||||    
T  32759489 aaatttattatatgcaagatatatataagctaatataatatcgtaaataggtcaatagtacaaaatat-gactta-attacaaaggcaaattataccaaa 32759586  T
Q  848 ccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtct 927  Q
    | | |||         | |||||| ||||||| ||||||||| |||| ||||| ||||||| | || |||||||||||||    
T  32759587 ctaccataataaaa-cgttatgctaaacttagcatcaaaatacaaaaattaacgcacaaaatcatatgtttcataagtct 32759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 710 - 815
Target Start/End: Original strand, 28403319 - 28403426
Alignment:
Q  710 gtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaa-tataatactgtaaaaagatcaatagtg 807  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||| ||||||| |||||| |  |||||||||    
T  28403319 gtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgacatatataagctaattataatattgtaaatatgtcaatagtg 28403418  T
Q  808 aaaaatat 815  Q
     |||||||    
T  28403419 caaaatat 28403426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 692
Target Start/End: Complemental strand, 26758370 - 26758317
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26758370 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 26758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 697 - 816
Target Start/End: Original strand, 42637520 - 42637639
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||| |||| |||||||||||| ||| |||||| ||||||||||||||| |  |||     
T  42637520 gtaaactcgaattgtaaactcgtatgagtttacctaaaattaaaattatata-aatttattatatacatgacatatataagctaatataatattacaaat 42637618  T
Q  796 agatcaatagtgaaaaatata 816  Q
    || ||||||||  ||||||||    
T  42637619 aggtcaatagtataaaatata 42637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 697 - 783
Target Start/End: Original strand, 34751036 - 34751123
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||| |||  ||| |||||||||||||||||    
T  34751036 gtaaactcgaatcgtaaactcgtacgaatttacctaaaattaaaattatataaaatttattttatatatagcatatgtaagctaatat 34751123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 697 - 761
Target Start/End: Complemental strand, 34019715 - 34019651
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  34019715 gtaaacttgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatat 34019651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 639 - 815
Target Start/End: Original strand, 48965829 - 48965992
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| |||||||||        |||||||      ||||| |||||||| ||||| |||||    
T  48965829 caaggttttgcaactcgagaatttacctcaacttgttttgccttggtaaactc--------aactcgag-----aactcctacgagttaacctaaaatta 48965915  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| ||||||  |||||||  |||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  48965916 aaattatataaaatttac-atatgcaagacatatgtaaactaatataatattgtaaatagatcaatagtgcaaaatat 48965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 713 - 815
Target Start/End: Original strand, 42303768 - 42303873
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatat--gcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaa 809  Q
    |||||||| || |||||||| |||||||||| |||| ||||||||||||  |||| ||||||||||| |||||||||| |||||| || ||||||||| |    
T  42303768 aactcgtatgactttacctaaaattaaaattatataaaatttattatatatgcatgacatatgtaagttaatataatattgtaaataggtcaatagtgca 42303867  T
Q  810 aaatat 815  Q
    ||||||    
T  42303868 aaatat 42303873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 639 - 705
Target Start/End: Original strand, 49236319 - 49236385
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  49236319 caagattttacaactcaagagtttacctcaactcgttttgcctaggtaaactcgactcgaaaactcg 49236385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 639 - 697
Target Start/End: Original strand, 27257570 - 27257628
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||    
T  27257570 caaggttttacaactcgagagtttacctcaactcgttttatccaagtaaactcgactcg 27257628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 637 - 705
Target Start/End: Complemental strand, 34019762 - 34019694
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||| ||||||| || |||||||||||    
T  34019762 tgcaaggttttacaactcgagagtttacctcaacttattttagctatgtaaacttgaatcgtaaactcg 34019694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 787
Target Start/End: Complemental strand, 15928335 - 15928244
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgc-atacatatgtaagctaatataata 787  Q
    |||||||||| |||  |||||||||||||||||||| ||||| |||| |||| |||||| ||||||| | ||||||  ||||||||||||||    
T  15928335 gtaaactcgactcgagaactcgtacgagtttacctaaaattagaattatataaaatttaatatatgcaagacatatacaagctaatataata 15928244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 651 - 697
Target Start/End: Complemental strand, 15928368 - 15928322
Alignment:
Q  651 actcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15928368 actcgggagtttacctcaactcgttttgcctaggtaaactcgactcg 15928322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 698 - 756
Target Start/End: Complemental strand, 43855142 - 43855084
Alignment:
Q  698 taaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttat 756  Q
    ||||||||| || |||||||||||||||||||||| |||||||||| |||| |||||||    
T  43855142 taaactcgactcataaactcgtacgagtttacctaaaattaaaattatataaaatttat 43855084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 705
Target Start/End: Complemental strand, 43855188 - 43855122
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||| |||| |||||||||||||||| ||||||||||||||||   |||||||||||| ||||||||    
T  43855188 caagattttacaactcgagagtttacgtcaactcgttttaccttattaaactcgactcataaactcg 43855122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 697 - 794
Target Start/End: Original strand, 49971048 - 49971146
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    |||||||||| |||  |||||||||||||||||||| ||||||||||  ||| | |||||||| | ||| |||||||||| |||||||| || ||||||    
T  49971048 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattaaataaagtttattatttacatgacatatgtaaactaatatagtattgtaaa 49971146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 697
Target Start/End: Original strand, 2292585 - 2292638
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  2292585 ttttgtaactcgagagtttacctcaactcattttgtctaggtaaactcgactcg 2292638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 697
Target Start/End: Original strand, 3583311 - 3583364
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||| |||||||||||||||||||||||| |||| | |||||||||||||||||    
T  3583311 ttttacaactcgagagtttacctcaactcattttgcttaggtaaactcgactcg 3583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 639 - 678
Target Start/End: Original strand, 34750991 - 34751030
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgtttta 678  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  34750991 caaggttttacaactcgagagtttacctcaactcgtttta 34751030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 655 - 697
Target Start/End: Complemental strand, 51903621 - 51903579
Alignment:
Q  655 gagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  51903621 gagagtttacctcaactcgttttgcctaggtaagctcgactcg 51903579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 697 - 794
Target Start/End: Complemental strand, 52182763 - 52182665
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    |||||||||| |||  |||| |||||||||||  || ||||||||||  ||| |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  52182763 gtaaactcgattcgagaacttgtacgagtttatttaaaattaaaattaaataaaatttattatttacatgacatatgtaaactaatataatattgtaaa 52182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 639 - 692
Target Start/End: Complemental strand, 1109067 - 1109014
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 692  Q
    ||||||||| ||| ||||||||||| |||||||||||||| ||| |||||||||    
T  1109067 caaggttttacaattcgagagtttatctcaactcgttttagctatgtaaactcg 1109014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 712 - 760
Target Start/End: Original strand, 49236379 - 49236427
Alignment:
Q  712 aaactcgtacgagtttacctagaattaaaattttatacaatttattata 760  Q
    |||||||||||||||||| || |||||||||| |||| |||||||||||    
T  49236379 aaactcgtacgagtttacataaaattaaaattatataaaatttattata 49236427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 761
Target Start/End: Complemental strand, 1109022 - 1108972
Alignment:
Q  710 gtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||||||||    
T  1109022 gtaaactcgtacgagtttacctaaaatt-aaattatataaaatttattatat 1108972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 748
Target Start/End: Original strand, 2292625 - 2292676
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttata 748  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||| ||||    
T  2292625 gtaaactcgactcgggaactcgtacgagtttacctaaaattaaaattatata 2292676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 815
Target Start/End: Complemental strand, 226594 - 226512
Alignment:
Q  734 aattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||| ||||| |||| |||||||||||| | | |||||| ||||||||||||||| || ||| || ||||||||| |||||||    
T  226594 aatttaaattatataaaatttattatatacgtgacatatataagctaatataatattgcaaataggtcaatagtgcaaaatat 226512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 722 - 815
Target Start/End: Original strand, 35176657 - 35176751
Alignment:
Q  722 gagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||||||||| |||||||||  |  | ||||||| |||||||| |||||| ||||||||||||||| |||||| |  | ||||||| |||||||    
T  35176657 gagtttacctaaaattaaaatgatccaaaatttatgatatgcatgacatatataagctaatataatattgtaaataagttaatagtgcaaaatat 35176751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 28403502 - 28403567
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||||||| | ||  ||||||||||||||||    
T  28403502 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataattttcataagtctctaa 28403567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 49452584 - 49452649
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||| ||| | || |||||||||||||||||    
T  49452584 tatgctcaacttagcatcaaaatacaaaaattaacgcaccaaatcataagtttcataagtctctaa 49452649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 640 - 1040
Target Start/End: Complemental strand, 8084950 - 8084550
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  8084950 aaggttttgcaactcgagagtttacctcaactcgttttatttaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattga 8084851  T
Q  740 aattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagt 839  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8084850 aattttatacaacttattatatgcatacatatgtaagctaatataatactataaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaagt 8084752  T
Q  840 ataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaac 939  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |    
T  8084751 ataccaaaccatcat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctacc 8084653  T
Q  940 catcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcca-aaaacagaataagtaattttctcgaaagggcaatctttctaaggtt 1036  Q
    ||||||||||| |||||||||| ||||||| || ||||||||||||||||||| |||||| | || |||||||  |||||||| ||||| |||||| |||    
T  8084652 catcccaaaaataaagtttcacaagtttataaacttgagaataaaactatccagaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagtt 8084554  T
Q  1037 ccat 1040  Q
    ||||    
T  8084553 ccat 8084550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 697 - 1040
Target Start/End: Complemental strand, 29469865 - 29469522
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaa 796  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29469865 gtaaactcgactcgtaaactcgtacgagtttacctaaaattgaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaa 29469766  T
Q  797 gatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatt 896  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||| |    
T  29469765 gatcaatagtgaaaaatatagacttac-ttataaatgcaaagtataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaat 29469668  T
Q  897 taacacacaaaagcgtaggtttcataagtctctaaagtctaaccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaa 993  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  29469667 taacacacaaaagcataggtttcataagtctctaaagtctacccatcccaaaaacaaagtttcacaagtttataaacttgagaataaaactatccaaaaa 29469568  T
Q  994 acagaataagtaattttctcgaaagggcaatctttctaaggttccat 1040  Q
    ||| | || |||||||  |||||||| ||||| |||||| |||||||    
T  29469567 acaaactaggtaatttcttcgaaaggtcaatc-ttctaaagttccat 29469522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 639 - 994
Target Start/End: Original strand, 42936922 - 42937277
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||     
T  42936922 caaggttttgcaactcgagagtttacctcaattcgttttacttagataaactcgactcgtaaactcgaatcgtaaactcgtacgagtctacctaaaattg 42937021  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  42937022 aaattttatacaatttattatatgcatggcatatgtaaactaatataatactgt-aaaagatcaatagtgaaaaatatagactta-attataaatgcaaa 42937119  T
Q  838 gtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtcta 937  Q
    ||||||||||| | |||          |||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  42937120 gtataccaaactaccataaaaaaa--tgtatgcttcacttagtatcaaaatagaaaaattaacacacaaaagcataggttacataagtctctaaagtcta 42937217  T
Q  938 -accatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatccaaaaa 994  Q
      |||||||||||| |||||||||| ||||| | || |||||||||||||||||||||||    
T  42937218 gcccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaa 42937277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 639 - 910
Target Start/End: Original strand, 23670917 - 23671175
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||              |||||||||||||||||||     
T  23670917 caaggttttacaactcgagagtttacctcaactcattttacctatataaactcgactcgtaaactca-------------tacgagtttacctagaattg 23671003  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||| |||    
T  23671004 aaattttatacaatttattatatccatgacatatgtaagctaatataatattgtaaaaagatcaattgtgaaaaatatagactta-attataaatgtaaa 23671102  T
Q  838 gtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagc 910  Q
    |||||||||||||  ||       ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23671103 gtataccaaaccactataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagc 23671175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 643 - 815
Target Start/End: Original strand, 53573644 - 53573817
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| |||||||||||||||||||||||| |||||| | |  ||||||||||||||||||||| |    ||||||||||||||||||||||| ||||||    
T  53573644 gttttacaactcgagagtttacctcaactcattttacttggacaaactcgactcgtaaactcgacttaagaactcgtacgagtttacctagaaataaaat 53573743  T
Q  743 tttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    | ||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||| |||||||| |||||||    
T  53573744 tatatacaatttattatatgcatgacatatgtaaactaatataatattgtaaatagaacaatagtgcaaaatat 53573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 639 - 761
Target Start/End: Complemental strand, 54561901 - 54561780
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||     
T  54561901 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgactcgtaaactcgtacgagtttacctaaaatt- 54561803  T
Q  739 aaattttatacaatttattatat 761  Q
    ||||| |||| ||||||||||||    
T  54561802 aaattatataaaatttattatat 54561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 639 - 794
Target Start/End: Original strand, 41206719 - 41206874
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||| |||| ||| |||  ||||||||||||||||| ||  ||||    
T  41206719 caaggttttacaactcaagagtttacctcaactcgttttacctaggtaaaatcaactcgaaaac-cgactcgataactcgtacgagtttacttaatatta 41206817  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    ||||| | ||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  41206818 aaattatgtacaatttattatatacatgacatatgtaagctaatataatattgtaaa 41206874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 644 - 815
Target Start/End: Complemental strand, 872289 - 872117
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaatt 743  Q
    |||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||    
T  872289 ttttacaactcaagagtttacctcaactcgttttgtctaggtaaactcgactcgtaaactcgactcgagaactcgtacgagtttacctaaaattaaaatt 872190  T
Q  744 ttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
      | | | |||||||| | ||| | |||||||| ||||||||||| |||||| ||  |||||||| |||||||    
T  872189 aaaaaaattttattatttacatgagatatgtaaactaatataatattgtaaatagtccaatagtgcaaaatat 872117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 643 - 760
Target Start/End: Original strand, 29965839 - 29965956
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| |||||||| ||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  29965839 gttttacaactcgaaagtttacctcaactcgttttagctatgtaaactcaaatcgtaatctcgactcgtaaactagtacgagtttacctaaaattaaaat 29965938  T
Q  743 tttatacaatttattata 760  Q
    | |||| |||||||||||    
T  29965939 tatataaaatttattata 29965956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 637 - 815
Target Start/End: Original strand, 24965802 - 24965967
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaat 736  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||  ||||| |||||||||| ||| |||    
T  24965802 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgac-------------tcgagaactcatacgagtttatctaaaat 24965888  T
Q  737 taaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||||  |||| |||||||||||||||| |||||| | ||||||||||||| |||||| || ||||||||| |||||||    
T  24965889 taaaataatataaaatttattatatgcatgacatatat-agctaatataatattgtaaataggtcaatagtgcaaaatat 24965967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 639 - 765
Target Start/End: Original strand, 4511358 - 4511484
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||| | || |||||||||||  | |  || ||||||||||||||||| |||||    
T  4511358 caaggttttgcaactcgagagtttacctcaactctttttgactaggtaaatttgagtcgtaaactcgtcttgagaaatcgtacgagtttacctaaaatta 4511457  T
Q  739 aaattttatacaatttattatatgcat 765  Q
    ||||| |||| |||||| |||||||||    
T  4511458 aaattatataaaatttactatatgcat 4511484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 639 - 816
Target Start/End: Original strand, 29509374 - 29509539
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||  ||||             |||||||||||||||| |||||    
T  29509374 caaggttttgcaactcgagagtttacctcaactaattttgtctaggtaaactcgactcgagaact-------------cgtacgagtttacctaaaatta 29509460  T
Q  739 aaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    ||||| |||  |||||||||||||| | ||||||||||||||||||| || |||||| || ||||||||| ||||||||    
T  29509461 aaattatattaaatttattatatgcaagacatatgtaagctaatatattattgtaaataggtcaatagtgcaaaatata 29509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 637 - 816
Target Start/End: Complemental strand, 32890667 - 32890500
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaat 736  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |         ||    |||||||||||||||||||| |||    
T  32890667 tgcaaggttttgcaactcgagagtttacctcaactcgttttgtttaggtaaactcgacttg---------at----aactcgtacgagtttacctaaaat 32890581  T
Q  737 taaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    ||||||| | |  |||||||||||||| | | ||||||||||||||||| || |||||| || ||||||||| ||||||||    
T  32890580 taaaattattttaaatttattatatgcaagatatatgtaagctaatatattattgtaaataggtcaatagtgcaaaatata 32890500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 639 - 761
Target Start/End: Original strand, 40487063 - 40487172
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||             |||||||||||||||||||||||||||| ||| |||||    
T  40487063 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaa-------------actcgaatcgtaaactcgtacgagtttatctataatta 40487149  T
Q  739 aaattttatacaatttattatat 761  Q
    |||||||||| ||||||||||||    
T  40487150 aaattttataaaatttattatat 40487172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 638 - 815
Target Start/End: Complemental strand, 50517883 - 50517718
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||  |||||  ||             ||||||| ||| ||||    
T  50517883 gcaaggttttgcaactcgaaagtttacctcaactcattttgcctaggtaaactcgactcgagaactcatat-------------gagtttatctaaaatt 50517797  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||| |||| ||||||| |||||||  |||||| ||||||||||||||| | |||| |||||||||||| |||||||    
T  50517796 aaaattatataaaatttatcatatgcaagacatatataagctaatataatattataaatagatcaatagtgcaaaatat 50517718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 697 - 761
Target Start/End: Original strand, 8562549 - 8562613
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  8562549 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatat 8562613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 636 - 783
Target Start/End: Complemental strand, 25014123 - 25013988
Alignment:
Q  636 ttgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaa 735  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||             || ||||||||||||||||||||||| ||    
T  25014123 ttgcaaggttttacaactcgagagtttacctcaactcgttttagctatgtaaacttga-------------attgtaaactcgtacgagtttacctaaaa 25014037  T
Q  736 ttaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    |||||||| |||| ||||||||||||  || |||||| |||||||||||    
T  25014036 ttaaaattatataaaatttattatatatataacatatttaagctaatat 25013988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 637 - 705
Target Start/End: Original strand, 56423414 - 56423482
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  56423414 tgcaaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcg 56423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 638 - 848
Target Start/End: Complemental strand, 12755098 - 12754900
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||| ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| | ||            |||||||||||||||||| ||||    
T  12755098 gcaatgttttacaactcgagagtttacctcaactcgttttgcttaggtaaactcgactcg-agac------------ctcgtacgagtttacctaaaatt 12755012  T
Q  738 aaaattttatacaatttattatatgcat---acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgc 834  Q
    |||||| |||| |||||||| |||||||   |  ||| |||| |||||||||| |||||| || ||||||||| ||||||| |||||| |||  ||| ||    
T  12755011 aaaattatataaaatttattgtatgcatgccatgtatataaggtaatataatattgtaaataggtcaatagtgcaaaatat-gacttaattt-caaaggc 12754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 705
Target Start/End: Complemental strand, 40163405 - 40163339
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  40163405 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcg 40163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 41469640 - 41469702
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41469640 gttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgactcgtaaactcg 41469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 639 - 705
Target Start/End: Original strand, 6486757 - 6486823
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  6486757 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcataaactcg 6486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 697 - 793
Target Start/End: Original strand, 26490634 - 26490731
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaa 793  Q
    |||||||||| |||  ||||| |||||||||||||| |||||||||| |||| | |||||||||||||| |||||| ||||||||||| ||| |||||    
T  26490634 gtaaactcgattcgagaactcatacgagtttacctaaaattaaaattatataaagtttattatatgcatgacatatataagctaatatgatattgtaa 26490731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 697 - 765
Target Start/End: Complemental strand, 33141067 - 33140999
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat 765  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  33141067 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcat 33140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 638 - 705
Target Start/End: Complemental strand, 26449288 - 26449221
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| || |||||||||||    
T  26449288 gcaaggttttacaactcgatagtttacctcaactcgttttagctatgtaaacttgaatcgtaaactcg 26449221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 637 - 699
Target Start/End: Original strand, 2326370 - 2326432
Alignment:
Q  637 tgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgta 699  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||    
T  2326370 tgcaatgttttgcaactcgcgagtttatctcaactcgttttgcctagataaactcgactcgta 2326432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 639 - 693
Target Start/End: Original strand, 46862257 - 46862311
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcga 693  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  46862257 caaggttttgcaactcgagagtttacctcaactcgttttgtctaggtaaattcga 46862311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 697 - 757
Target Start/End: Original strand, 23170160 - 23170220
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttatt 757  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||| |||| ||||||||    
T  23170160 gtaaactcgaatcggaaactcgtacaagtttacctaaaattaaaattatataaaatttatt 23170220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 783
Target Start/End: Complemental strand, 9973466 - 9973378
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat---acatatgtaagctaatat 783  Q
    |||||||||| || |||||||||||||||||||||| |||| ||||| |||| ||||||||||||  ||   ||||||||||||||||||    
T  9973466 gtaaactcgactcataaactcgtacgagtttacctaaaatt-aaattatataaaatttattatatatataaaacatatgtaagctaatat 9973378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 705
Target Start/End: Complemental strand, 22480416 - 22480350
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||| |||||||||||||||| |||||||   ||||||| ||||| ||||||||||||||||    
T  22480416 caaggttttacaactcgagagtttacttcaactctaattacctaagtaaattcgactcgtaaactcg 22480350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 640 - 697
Target Start/End: Original strand, 17503227 - 17503284
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||| ||||| |||||||||||||||||| |||| | |||||||||||||||||    
T  17503227 aaggttttacaacttgagagtttacctcaactcattttgcttaggtaaactcgactcg 17503284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 692
Target Start/End: Complemental strand, 51967818 - 51967765
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 692  Q
    |||||||||  ||||||||||||||||||||||||||||| ||| |||||||||    
T  51967818 caaggttttataactcgagagtttacctcaactcgttttagctacgtaaactcg 51967765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 697 - 738
Target Start/End: Original strand, 56423461 - 56423502
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  56423461 gtaaactcgaatcgtaaactcgtacgagtttacctaaaatta 56423502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 757
Target Start/End: Complemental strand, 26449242 - 26449183
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttatt 757  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||| |||| ||||||||    
T  26449242 gtaaacttgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaatttatt 26449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 705
Target Start/End: Complemental strand, 9973507 - 9973445
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||| |||||| ||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||    
T  9973507 gttttacaactcaagattttacctcaactcattttagctatgtaaactcgactcataaactcg 9973445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 697 - 795
Target Start/End: Original strand, 17503271 - 17503369
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| |||  |||||||| ||||||||||| ||||||||||  ||| |||||||||| |  | |||| ||||| ||||||| ||| |||||||    
T  17503271 gtaaactcgactcgagaactcgtatgagtttacctaaaattaaaattaaataaaatttattatttatagacatttgtaaactaatatgatattgtaaaa 17503369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 23170119 - 23170181
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||| |||||| |||||||| ||||||||||||||| || |||||||||| ||| |||||||    
T  23170119 gttttacaactcaagagtttatctcaactcgttttacataagtaaactcgaatcggaaactcg 23170181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 636 - 787
Target Start/End: Original strand, 21305713 - 21305866
Alignment:
Q  636 ttgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgac-tcgtaaactcgaatcgtaaactcgtacgagtttacctaga 734  Q
    |||||||||||| | | || || |||||| |||||||||||||| || ||||| |  |  | |||||||||| || |||||||||| ||||||||| | |    
T  21305713 ttgcaaggttttacgattcaagggtttacttcaactcgttttacttatgtaaattttaaattgtaaactcgactcataaactcgtatgagtttacccaaa 21305812  T
Q  735 attaaaattttatacaatttattatatgcat-acatatgtaagctaatataata 787  Q
    ||||  ||| |||| |||||||||||| ||| |||| |||| |||||| |||||    
T  21305813 attatcattatataaaatttattatatacataacatttgtatgctaatgtaata 21305866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 807
Target Start/End: Complemental strand, 24454292 - 24454197
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtg 807  Q
    |||||||||||||||| ||| ||||||||||  ||| |||||||||| | ||| |||||||||| ||| | ||||| || ||| || |||||||||    
T  24454292 aactcgtacgagtttatctaaaattaaaattaaataaaatttattatttacatgacatatgtaaactactgtaatattgaaaatagttcaatagtg 24454197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 677
Target Start/End: Complemental strand, 33141113 - 33141074
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgtttt 677  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  33141113 gcaaggttttgtaactcgagagtttacctcaattcgtttt 33141074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 794
Target Start/End: Original strand, 46862325 - 46862400
Alignment:
Q  720 acgagtttacctagaattaaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaa 794  Q
    ||||||||||||| ||||||||||  | | |||||| ||||||| | |||||| ||||||||||||||| ||||||    
T  46862325 acgagtttacctaaaattaaaattacagaaaatttactatatgcaagacatatataagctaatataatattgtaaa 46862400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 816
Target Start/End: Original strand, 40317107 - 40317157
Alignment:
Q  766 acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    |||||||||||||||||||||| || ||| || ||||||||| ||||||||    
T  40317107 acatatgtaagctaatataatattgcaaataggtcaatagtgcaaaatata 40317157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 816
Target Start/End: Original strand, 40327181 - 40327231
Alignment:
Q  766 acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatata 816  Q
    |||||||||||||||||||||| || ||| || ||||||||| ||||||||    
T  40327181 acatatgtaagctaatataatattgcaaataggtcaatagtgcaaaatata 40327231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 873 - 931
Target Start/End: Original strand, 46862476 - 46862534
Alignment:
Q  873 aacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    ||||||| ||||||||| |||  ||||||||||||| | || |||||||||||||||||    
T  46862476 aacttagcatcaaaatacaaagattaacacacaaaatcataagtttcataagtctctaa 46862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 697 - 785
Target Start/End: Complemental strand, 22480371 - 22480283
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataa 785  Q
    ||||| |||| |||||||||||||  |||||| ||| |||||||||| |||| || ||| ||||| ||| |||||||||||| |||||||    
T  22480371 gtaaattcgactcgtaaactcgtatcagtttatctaaaattaaaattatata-aacttactatatacatgacatatgtaagccaatataa 22480283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 32890453 - 32890388
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| | ||||| | || |||||||||||||||||    
T  32890453 tatgctcaacttagcatcaaaatacaaaaattaacgcccaaaatcataagtttcataagtctctaa 32890388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 33139372 - 33139307
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||| ||| ||||||||| |||| ||||| ||||||| | || |||||||||||||||||    
T  33139372 tatgctcaacgtagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 33139307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 41469706 - 41469767
Alignment:
Q  722 gagtttacctagaattaaaattttatacaatttattatatgcata-catatgtaagctaata 782  Q
    ||||||||||| |||||||||| |||| ||||||||||||  ||| ||||| ||||||||||    
T  41469706 gagtttacctaaaattaaaattatataaaatttattatatatatagcatatttaagctaata 41469767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 49418780 - 49418739
Alignment:
Q  660 tttacctcaactcgttttacctaggtaaactcgactcgtaaa 701  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  49418780 tttacctcaactcattttgcctaggtaaactctactcgtaaa 49418739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 639 - 994
Target Start/End: Original strand, 37797459 - 37797814
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||     
T  37797459 caaggttttgcaactcgagagtttacctcaactcgttttacctagataaactcgactcgtaaactcgaatcataaactcgtacgagtttacctaaaattg 37797558  T
Q  739 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37797559 aaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaag 37797657  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaa 938  Q
    |||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||     
T  37797658 tataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataagtttcataagtctctaaagtctac 37797756  T
Q  939 ccatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatccaaaaa 994  Q
    |||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||    
T  37797757 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaa 37797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 643 - 1040
Target Start/End: Original strand, 28622512 - 28622910
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28622512 gttttgcaactcgagagtttacctcaactcgttttagctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattgaaat 28622611  T
Q  743 tttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtata 842  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28622612 tttatacaatttattatatgcatacatatgtaagctgatataataccgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaagtata 28622710  T
Q  843 ccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaaccat 942  Q
    |||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28622711 ccaaaccaccataaaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagcataggtttcataagtctctaaagtctacccat 28622810  T
Q  943 cccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggttcca 1039  Q
    |||||||| ||||||| || ||||| | || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||||||    
T  28622811 cccaaaaagaaagttttacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagttcca 28622909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 639 - 994
Target Start/End: Original strand, 5650129 - 5650469
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||             |||||||||||||||||| ||||     
T  5650129 caaggttttactactcaagagtttacctcaactcgttttacctaggtaaactcgactcataaa-------------ctcgtacgagtttacctaaaattg 5650215  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||  |||||||||||||    
T  5650216 aaattgtatacaatttattatatgaatgacatatgtaagctaatataatattgtaaaaagatcaataataaaaaatatagactta-attataaatgcaaa 5650314  T
Q  838 gtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtcta 937  Q
    | ||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||||||   | |    
T  5650315 gcataccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaactcacaaaagcataagtttcataagtctctaa---caa 5650410  T
Q  938 accatcccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatccaaaaa 994  Q
     ||||||||||||  ||||||||| ||||| | || ||||||||||||||||| |||||    
T  5650411 cccatcccaaaaagcaagtttcacaagtttctaaacttgagaataaaactatcaaaaaa 5650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 639 - 840
Target Start/End: Original strand, 7124228 - 7124416
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||             |||||||||||||||||| ||||||||||||| ||||     
T  7124228 caaggttttgcaactcgaaagtttacctcaactcgttttacctaggtaa-------------actcgaatcgtaaactcgcacgagtttacctaaaattg 7124314  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7124315 aaattttatacaatttattatatgcatgacatatataagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgcaaa 7124413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 643 - 783
Target Start/End: Complemental strand, 25869454 - 25869313
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  25869454 gttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgactcgtaaattcgtacgagtttacctaaaattaaaat 25869355  T
Q  743 tttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    | |||| ||||||||||||  ||| |||||||||||||||||    
T  25869354 tatataaaatttattatatatatagcatatgtaagctaatat 25869313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 639 - 740
Target Start/End: Original strand, 32236888 - 32236989
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| || ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  32236888 caaggttttacacctcgagagtttacctcaactcgttttaactatgtaaactcgaatcgtaaactcgactcgtaaactcgtacgagtttacctaaaatta 32236987  T
Q  739 aa 740  Q
    ||    
T  32236988 aa 32236989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 931
Target Start/End: Original strand, 29716216 - 29716490
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||             |||  | | |||||||||||||||| ||||||    
T  29716216 aaggttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgac-------------tcgagatcccgtacgagtttacctaaaattaa 29716302  T
Q  740 aattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaag 838  Q
    |||| |||| ||||||||||||| || |||||| ||||||||||||||| |||||| |  ||||||||| ||||||| ||||||  ||| ||| |||||     
T  29716303 aattgtataaaatttattatatggatgacatatataagctaatataatattgtaaatatgtcaatagtgcaaaatat-gactta-attacaaaggcaaat 29716400  T
Q  839 tataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||||||| | |||        || |||||| ||||||| ||||||||| |||| |||  |||||||| | || |||||||||||||||||    
T  29716401 tataccaaactaccataataaaa-tgttatgctcaacttagcatcaaaatataaaaatta--acacaaaatcataagtttcataagtctctaa 29716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 636 - 815
Target Start/End: Complemental strand, 35702015 - 35701848
Alignment:
Q  636 ttgcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaa 735  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||             |||| ||||||||||||||| ||    
T  35702015 ttgcaaggttttacaactcgagagtttacctcaactcgttttacttaggtaaactcaactcgta-------------aacttgtacgagtttacctaaaa 35701929  T
Q  736 ttaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||||| || | || ||||||||| ||| |||||| |||||||||||||||||||||| || | |||| || |||||||    
T  35701928 ttaaaattataaaaaaattattatatacatgacatatataagctaatataatactgtaaataggttaataatgcaaaatat 35701848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 644 - 815
Target Start/End: Complemental strand, 31914152 - 31913993
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaatt 743  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||             ||| ||||||||||||||| |||||| ||||||||||    
T  31914152 ttttacaactcgagagtttacctcaactcgttttacctatgtaaactcga-------------atcataaactcgtacgagtatacctaaaattaaaatt 31914066  T
Q  744 ttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
     |||| |||||||||||| ||| | |||||||||||||||||||| || ||| |  ||||||||| |||||||    
T  31914065 atataaaatttattatatacatgatatatgtaagctaatataatattgcaaataagtcaatagtgcaaaatat 31913993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 639 - 782
Target Start/End: Original strand, 33892262 - 33892393
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||             |||||||||||||||||||||||||||||||| |||||    
T  33892262 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaa-------------actcgaatcgtaaactcgtacgagtttacctaaaatta 33892348  T
Q  739 aaattttatacaatttattatatgcata-catatgtaagctaata 782  Q
    ||||| |||| ||||||||||||  ||| ||||| ||||||||||    
T  33892349 aaattatataaaatttattatatatatagcatatttaagctaata 33892393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 707 - 815
Target Start/End: Original strand, 4840873 - 4840982
Alignment:
Q  707 atcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatag 805  Q
    |||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||||| ||| | |||||| ||||||||||||| |||||| || |||||||    
T  4840873 atcgaaaacttgtacgagtttaactaaaattaaaattatatacaatttattatatacatgatatatgtgagctaatataatattgtaaataggtcaatag 4840972  T
Q  806 tgaaaaatat 815  Q
    || |||||||    
T  4840973 tgcaaaatat 4840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 643 - 739
Target Start/End: Original strand, 16497276 - 16497372
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    ||||| |||||| |||||||  |||||||||||||| ||| |||||||  | |||||||||||| || |||||||||||||||||||||| ||||||    
T  16497276 gttttacaactcaagagtttgtctcaactcgttttatctaagtaaactaaaatcgtaaactcgactcataaactcgtacgagtttacctaaaattaa 16497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 697 - 761
Target Start/End: Complemental strand, 34910224 - 34910160
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||    
T  34910224 gtaaactcgaatcgtaaactcgtacgagtttatctaaaattaaaattatataaaatttattatat 34910160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 3032833 - 3032758
Alignment:
Q  711 taaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataa 785  Q
    |||||||||||||||||||||| ||| |||||| |||| |||||||||||| ||| ||||||||||||||||||||    
T  3032833 taaactcgtacgagtttacctaaaatcaaaattatataaaatttattatatacatgacatatgtaagctaatataa 3032758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 701 - 843
Target Start/End: Complemental strand, 16801314 - 16801173
Alignment:
Q  701 actcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgca-tacatatgtaagctaatataatactgtaaaaagat 799  Q
    ||||||||||| ||||||||| ||| || ||| |||||||||| |||| |||||| |||||||| || |||||||||||||||||||| || ||| || |    
T  16801314 actcgaatcgtgaactcgtacaagtgtatctaaaattaaaattatataaaatttactatatgcattatatatgtaagctaatataatattgcaaataggt 16801215  T
Q  800 caatagtgaaaaatatagacttactttataaatgcaaagtatac 843  Q
    ||||| ||  |||||| || |||  |||||||||||||||||||    
T  16801214 caatattgcgaaatat-gattta-attataaatgcaaagtatac 16801173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 650 - 761
Target Start/End: Original strand, 36195679 - 36195790
Alignment:
Q  650 aactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatac 749  Q
    ||||||| |||||||||||||| ||||||| ||  ||||||||| |||||||||||| | ||||| || ||| |||||  ||| |||||||||| ||||     
T  36195679 aactcgaaagtttacctcaacttgttttacgtatataaactcgaatcgtaaactcgacttgtaaattcatacaagtttgtctaaaattaaaattatataa 36195778  T
Q  750 aatttattatat 761  Q
    ||||||||||||    
T  36195779 aatttattatat 36195790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 783
Target Start/End: Original strand, 21238203 - 21238334
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||             |||||||| ||||||||||||||||| |||||    
T  21238203 caaggttttacaactcgagagtttacctcaactcgttttaactatgtaaacttga-------------atcgtaaaatcgtacgagtttacctaaaatta 21238289  T
Q  739 aaattttatacaatttattatatgcata-catatgtaagctaatat 783  Q
    ||||| |||| ||||||||||||  ||| |||||||||| ||||||    
T  21238290 aaattgtata-aatttattatatatatagcatatgtaagttaatat 21238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 698 - 761
Target Start/End: Original strand, 2674555 - 2674618
Alignment:
Q  698 taaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||    
T  2674555 taaattcgaatcgtaaactcgtacgagtttatctaaaattaaaattatataaaatttattatat 2674618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 649 - 703
Target Start/End: Complemental strand, 36180276 - 36180222
Alignment:
Q  649 caactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaact 703  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  36180276 caactcgagagtttacctcaactcattttacttaggtaaactcaactcgtaaact 36180222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 641 - 705
Target Start/End: Complemental strand, 34910267 - 34910203
Alignment:
Q  641 aggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||| ||| ||||||||||||||||||||||||||  || |||||||||| |||||||||||    
T  34910267 aggttttacaattcgagagtttacctcaactcgttttagttatgtaaactcgaatcgtaaactcg 34910203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 815
Target Start/End: Complemental strand, 29759356 - 29759238
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| |||  || ||||||||||||| ||| ||||||||||  ||| |||||||||| |  || |||||||||| ||||||||||| ||||||     
T  29759356 gtaaactcgactcgagaaatcgtacgagtttatctaaaattaaaattaaata-aatttattatttaaatgacatatgtaaactaatataatattgtaaat 29759258  T
Q  796 agatcaatagtgaaaaatat 815  Q
    || ||||||||| |||||||    
T  29759257 agttcaatagtgcaaaatat 29759238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 697
Target Start/End: Complemental strand, 29759401 - 29759343
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||| |||||||| ||||||||||||||| |||| | |||||||||||||||||    
T  29759401 caaggttttacaactcgatagtttacctcaactcattttgcttaggtaaactcgactcg 29759343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 713 - 815
Target Start/End: Original strand, 16548588 - 16548691
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaa 811  Q
    ||||||||||| |||||||| ||||||||||  ||| |||||||||| | |||  ||||||||| ||||||||||| |||||| ||  |||| ||| |||    
T  16548588 aactcgtacgaatttacctaaaattaaaattaaataaaatttattatttacatggcatatgtaaactaatataatattgtaaatagtccaatcgtgcaaa 16548687  T
Q  812 atat 815  Q
    ||||    
T  16548688 atat 16548691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 697 - 844
Target Start/End: Complemental strand, 36180241 - 36180094
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||| | ||||||||| ||| || |||| ||| |||||||||| |||| ||||||| |||| ||| |  || || ||||||||||||| ||||||     
T  36180241 gtaaactcaactcgtaaacttgtatgattttatctaaaattaaaattatataaaatttatcatatacatgatgtacgtgagctaatataatattgtaaat 36180142  T
Q  796 agatcaatagtgaaaaatatagacttactttataaatgcaaagtatacc 844  Q
    |  ||||||||| ||||||| |||||| ||   ||| ||||||||||||    
T  36180141 atgtcaatagtgcaaaatat-gacttaattataaaaggcaaagtatacc 36180094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 9164574 - 9164515
Alignment:
Q  360 tgaaaactcctcttgatgatttgaaggaaaaagttgtcactattggcatcaaggaggtaa 419  Q
    ||||||| || ||| |||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  9164574 tgaaaacaccacttaatgacttgaaagaaaaggttatcactattggcatcaaggaggtaa 9164515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 705
Target Start/End: Complemental strand, 19226338 - 19226272
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||||||| ||| |  ||||||||||||||||||||||| ||| ||||| |||| | |||||||||    
T  19226338 caaggttttacaatttaagagtttacctcaactcgttttagctatgtaaattcgaattgtaaactcg 19226272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 255; Significance: 1e-141; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 643 - 1040
Target Start/End: Original strand, 18899248 - 18899645
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  18899248 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacttaaaattgaaat 18899347  T
Q  743 tttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtata 842  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18899348 tttatacaatttattatatgtatacatatgtaaactaatataatactgtaaaaagatcaatagtgaaaaatatagacttac-ttataaatgcaaagtata 18899446  T
Q  843 ccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaaagtctaaccat 942  Q
    |||||||| |||       ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| ||||    
T  18899447 ccaaaccaccat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaatcataggtttcataagtctctaaagtctacccat 18899545  T
Q  943 cccaaaaacaaagtttcac-agtttat-aatttgagaataaaactatcc-aaaaacagaataagtaattttctcgaaagggcaatctttctaaggttcca 1039  Q
    |||||||| |||||||||| ||||| | || |||||||||||||||||| ||||||| | || |||||||  |||||||| ||||| |||||| ||||||    
T  18899546 cccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtcaatc-ttctaaagttcca 18899644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 722 - 910
Target Start/End: Complemental strand, 15224714 - 15224527
Alignment:
Q  722 gagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagact 820  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  15224714 gagtttacctaaaattgaaattttatacaatttattatatgcatgacatatgtaagctaatataatattgtaaaaagatcaattgtgaaaaatatagact 15224615  T
Q  821 tactttataaatgcaaagtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagc 910  Q
    || |||||||||||||||||||||||||||  ||       ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15224614 ta-tttataaatgcaaagtataccaaaccactat-aaaaaagtggtatgcttaacttagtatcaaaatagaaaaattaacacacaaaagc 15224527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 641 - 815
Target Start/End: Original strand, 18726919 - 18727094
Alignment:
Q  641 aggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaa 740  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||  |||||||||||||||||||| |||||||    
T  18726919 aggttttgcaacttgagagtttacctcaactcgttttgcttaggtaaactcgattcgtaaactcgactcgagaactcgtacgagtttacctaaaattaaa 18727018  T
Q  741 attttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||| |||| ||||||||||||| || ||| || ||||||||||||||| ||||||    ||||||||| |||||||    
T  18727019 attatataaaatttattatatggatgacaaatataagctaatataatattgtaaattagtcaatagtgcaaaatat 18727094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 639 - 761
Target Start/End: Complemental strand, 13908751 - 13908629
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| ||| ||||||||||||||||||||||||||  || |||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||    
T  13908751 caaggttttacaattcgagagtttacctcaactcgttttaattatgtaaactcgaatcgtaaactcgactcgtaaattcgtacgagtttacctaaaatta 13908652  T
Q  739 aaattttatacaatttattatat 761  Q
    ||||| |||| ||||||||||||    
T  13908651 aaattatataaaatttattatat 13908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 638 - 762
Target Start/End: Original strand, 35403911 - 35404036
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | || |||  ||||||| |||||||||||| ||||    
T  35403911 gcaagattttgcaacttgagagtttacctcaactcgttttacataggtaaactcgactcgtaaatttgactcgagaactcgtgcgagtttacctaaaatt 35404010  T
Q  738 -aaaattttatacaatttattatatg 762  Q
     ||||||  ||| |||||||||||||    
T  35404011 aaaaattacataaaatttattatatg 35404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 638 - 930
Target Start/End: Original strand, 31846478 - 31846755
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |  ||||             |||||||||||||||| | ||    
T  31846478 gcaaggttttgcaactcgagagtttatctcaactcattttgcctaggtaaactcgacttgagaact-------------cgtacgagtttacctaaattt 31846564  T
Q  738 aaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaa 836  Q
    |||||| |||| |||||||||||||||| |||||| ||| ||||||||||| |||||| || ||||||||| ||||||| ||||||  ||||||| | ||    
T  31846565 aaaattatataaaatttattatatgcatgacatatataaactaatataatattgtaaataggtcaatagtgcaaaatat-gactta-attataaaggtaa 31846662  T
Q  837 agtataccaaaccatcatnnnnnnngtggtatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctcta 930  Q
    | |||||||||| | |||         | |||||| |||||||||| |||||| |||| | ||| ||||||| | || ||||||||||||||||    
T  31846663 actataccaaactaccataatgaaa-cgttatgctcaacttagtattaaaatacaaaaatgaacgcacaaaatcataagtttcataagtctcta 31846755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 643 - 815
Target Start/End: Complemental strand, 42242583 - 42242423
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||  ||||||             |||||||| ||||| |||||||||    
T  42242583 gttttgaaactcgagagtttacctcaactcgctttgcctaggtaaactcgactcgagaactcg-------------tacgagttgacctaaaattaaaat 42242497  T
Q  743 tttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    | | || |||||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||    
T  42242496 tatgtaaaatttattatatgcatgacatatataagctaatataatattgtaaataggtcaatagtgcaaaatat 42242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 640 - 755
Target Start/End: Complemental strand, 30851498 - 30851383
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    |||||||||||| |||||| ||||||||||||| |||| | ||||||||||| ||| ||||| |||| |||  |||||||| ||||||||||| ||||||    
T  30851498 aaggttttgcaattcgagaatttacctcaactctttttgcttaggtaaactctactggtaaagtcgactcgagaactcgtatgagtttacctaaaattaa 30851399  T
Q  740 aattttatacaattta 755  Q
    |||| |||| ||||||    
T  30851398 aattatataaaattta 30851383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 723 - 842
Target Start/End: Original strand, 43304659 - 43304777
Alignment:
Q  723 agtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagactt 821  Q
    |||||||||| |||||||||| |||| |||||||||||||||| |||| || || ||||||||||| |||||| ||||||| |||| ||||||| |||||    
T  43304659 agtttacctaaaattaaaattctatataatttattatatgcatgacatttgcaaactaatataatattgtaaatagatcaacagtgcaaaatat-gactt 43304757  T
Q  822 actttataaatgcaaagtata 842  Q
    |  ||||||||||||||||||    
T  43304758 a-attataaatgcaaagtata 43304777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 697 - 783
Target Start/End: Original strand, 45160654 - 45160740
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatat 783  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||  || ||||||||||||||||||    
T  45160654 gtaaactcgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaatttattatatatataacatatgtaagctaatat 45160740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 697 - 848
Target Start/End: Complemental strand, 9731694 - 9731537
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat--------acatatgtaagctaatataatac 788  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||| |||| ||||||||||||||||        |||||| ||||||||||| |||     
T  9731694 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcataatgcatgacatatataagctaatatgatat 9731595  T
Q  789 tgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaac 848  Q
    |||||| || ||||||||| ||||||| ||||||  ||| ||| ||||| ||||||||||    
T  9731594 tgtaaataggtcaatagtgcaaaatat-gactta-attacaaaagcaaattataccaaac 9731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 28546481 - 28546305
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||| ||| ||| |||| |||||||| ||| || ||||| ||| ||||| | || |||||||||||| ||||||| | |||| |||||||||| |||||    
T  28546481 caaggatttacaattcgaaagtttaccgcaaatcattttatctatgtaaatttgaatcgtaaactcgactcgtaaaatagtac-agtttacctaaaatta 28546383  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||| | | |||||  |||||||||| |||| || ||| || |||||| || |||||||    
T  28546382 aaattatataaaatttattatatacctaacatacataagctaatagaatattgcaaataggtcaataatgtaaaatat 28546305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 33263547 - 33263482
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactc 704  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||    
T  33263547 caaggttttacaactcgagagtttacctcaacttgttttagctatgtaaactcgaatcgtaaactc 33263482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 644 - 705
Target Start/End: Original strand, 38411938 - 38411999
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  38411938 ttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcg 38411999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 713 - 813
Target Start/End: Complemental strand, 40830359 - 40830258
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaa 811  Q
    ||||||||||| |||||||| |||||||||| | || ||||||| |||||||| |||||| |||||| |||||||| |||||| || ||||||||| |||    
T  40830359 aactcgtacgaatttacctaaaattaaaattatttaaaatttatgatatgcatgacatatataagctcatataatattgtaaataggtcaatagtgtaaa 40830260  T
Q  812 at 813  Q
    ||    
T  40830259 at 40830258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 695 - 794
Target Start/End: Complemental strand, 24026517 - 24026417
Alignment:
Q  695 tcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaa 793  Q
    |||||||||||| |||||||| | |||||| ||||||| | |||||| | |||| |||||| ||||| ||| ||||||||||||||| ||||||||||||    
T  24026517 tcgtaaactcgactcgtaaacccatacgagattacctaaagttaaaaatatataaaatttactatatacatgacatatgtaagctaacataatactgtaa 24026418  T
Q  794 a 794  Q
    |    
T  24026417 a 24026417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 700 - 794
Target Start/End: Original strand, 38295070 - 38295165
Alignment:
Q  700 aactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 794  Q
    ||||||| |||  |||| ||||||||||||||| |||||||||| |||| |||||||||||||||| | |||| ||||||||| ||||| ||||||    
T  38295070 aactcgactcgagaacttgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgatatatataagctaatttaatattgtaaa 38295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 697 - 815
Target Start/End: Original strand, 2307913 - 2308030
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcatacatatgtaagctaatataatactgtaaaaa 796  Q
    |||||||||| |||  ||||| |||||||||||||| || ||||||| |||| ||||||||||||||   ||| | |||| |||||||||| |||||| |    
T  2307913 gtaaactcgactcgataactcttacgagtttacctacaactaaaattatataaaatttattatatgc-gccatgtataagttaatataatattgtaaata 2308011  T
Q  797 gatcaatagtgaaaaatat 815  Q
    | ||||||||| |||||||    
T  2308012 ggtcaatagtgcaaaatat 2308030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 638 - 692
Target Start/End: Complemental strand, 12520368 - 12520314
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 692  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  12520368 gcaaggttttgcaacttgagagtttacctcaactcgttttgcctaggtaagctcg 12520314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 655 - 697
Target Start/End: Original strand, 32241815 - 32241857
Alignment:
Q  655 gagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32241815 gagagtttacctcaactcgttttacctaggtaaactcgactcg 32241857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 698 - 783
Target Start/End: Complemental strand, 41979448 - 41979360
Alignment:
Q  698 taaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcata---catatgtaagctaatat 783  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||| |||| |||||||| |||  |||   |||||||||||||||||    
T  41979448 taaattcgaatcataaactcgtacgagtttacctaaaattaaaattatataaaatttattttatatatatagcatatgtaagctaatat 41979360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 651 - 815
Target Start/End: Complemental strand, 34343020 - 34342869
Alignment:
Q  651 actcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttataca 750  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||         ||     ||||||||||| |||||||| |||||||||| |||| |    
T  34343020 actcgagagtttacctcaactcgttttgcttaggtaaactcgactc---------aag----aactcgtacgaatttaccta-aattaaaattatataaa 34342935  T
Q  751 atttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||||||||| ||| |||||| ||| ||||||||||| |||||| || | |||| || |||||||    
T  34342934 atttattatatacatgacatatataaactaatataatattgtaaataggtgaatattgtaaaatat 34342869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 697 - 740
Target Start/End: Original strand, 38411978 - 38412021
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaa 740  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  38411978 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaa 38412021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 697
Target Start/End: Complemental strand, 9731734 - 9731681
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    |||| |||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  9731734 ttttacaactcgagagtttaccttaacttgttttgcctaggtaaactcgactcg 9731681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 32643989 - 32643924
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||| || | |||||||||    
T  32643989 aaggtttttcaactcgaaagtttacctcaacttcttttacctaggtaaacttgagttgtaaactcg 32643924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 644 - 695
Target Start/End: Complemental strand, 40830415 - 40830364
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgact 695  Q
    |||| ||||||||||||||||||||||||||||| | || ||||||||||||    
T  40830415 ttttacaactcgagagtttacctcaactcgttttgcttaagtaaactcgact 40830364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 690 - 794
Target Start/End: Complemental strand, 37790435 - 37790332
Alignment:
Q  690 tcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatac 788  Q
    ||||||| ||||||||| ||||||| |||||||||||||| || || ||||||| |||  || |||||||||  || |||||| ||  ||||||||||||    
T  37790435 tcgactcataaactcgactcgtaaaatcgtacgagtttacgtaaaagtaaaattatattaaaattattatatagatgacatatata--ctaatataatac 37790338  T
Q  789 tgtaaa 794  Q
    ||||||    
T  37790337 tgtaaa 37790332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 697 - 761
Target Start/End: Original strand, 13327677 - 13327741
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatat 761  Q
    |||| ||||| ||||||||||||||||||||||||| |||||| ||| |||| || |||| ||||    
T  13327677 gtaatctcgactcgtaaactcgtacgagtttacctaaaattaatattgtataaaaattatcatat 13327741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Complemental strand, 10438698 - 10438655
Alignment:
Q  660 tttacctcaactcgttttacctaggtaaactcgactcgtaaact 703  Q
    |||||||||||||||||| ||||||| || ||||||||||||||    
T  10438698 tttacctcaactcgtttttcctaggtgaaatcgactcgtaaact 10438655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 697 - 740
Target Start/End: Complemental strand, 33263502 - 33263459
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaa 740  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||    
T  33263502 gtaaactcgaatcgtaaactcatacgaatttacctaaaattaaa 33263459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 682
Target Start/End: Complemental strand, 41979494 - 41979451
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttaccta 682  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||    
T  41979494 caaggttttacaacttgagagtttacctcaactcgttttaacta 41979451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 708 - 785
Target Start/End: Complemental strand, 2104364 - 2104286
Alignment:
Q  708 tcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataa 785  Q
    ||||||| ||||||||||||| ||| |||||||||| ||||  |||||||||||   | | ||||||||||||||||||    
T  2104364 tcgtaaattcgtacgagtttatctaaaattaaaattatataatatttattatatatgtgatatatgtaagctaatataa 2104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 697
Target Start/End: Original strand, 2307868 - 2307926
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||| ||||||||||||||| || ||||  |||| | |||||||||||||||||    
T  2307868 caaggttttacaactcgagagtttatcttaacttattttgcttaggtaaactcgactcg 2307926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 873 - 931
Target Start/End: Complemental strand, 34342813 - 34342755
Alignment:
Q  873 aacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    ||||||| ||||||||| |||| ||||||||||||| | ||  ||||||||||||||||    
T  34342813 aacttagcatcaaaatacaaaaattaacacacaaaatcataaatttcataagtctctaa 34342755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 815
Target Start/End: Original strand, 37810304 - 37810386
Alignment:
Q  734 aattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||||||||| |||| |||||||||||  ||| ||||||||| |||||||||||| |||| | || |||||| || |||||||    
T  37810304 aattaaaattatataaaatttattatacacatgacatatgtatgctaatataatattgtatataggtcaatattgtaaaatat 37810386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 697 - 743
Target Start/End: Complemental strand, 43618192 - 43618146
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaatt 743  Q
    |||||||||| |||  |||||||||||||||||||| ||||||||||    
T  43618192 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaatt 43618146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 30850933 - 30850868
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||| | || ||||| ||| |||||||    
T  30850933 tatgctcaacttagcatcaaaatacaaaaattaacacacaaaatcataagtttcgtaaatctctaa 30850868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 640 - 697
Target Start/End: Complemental strand, 43618236 - 43618179
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 697  Q
    ||||||||  |||||||||||||||||||| |  |||| | |||||||||||||||||    
T  43618236 aaggttttataactcgagagtttacctcaatttattttgcttaggtaaactcgactcg 43618179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 1e-93; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 639 - 840
Target Start/End: Complemental strand, 6789141 - 6788940
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  6789141 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 6789042  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  6789041 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgcaaa 6788943  T
Q  838 gta 840  Q
    |||    
T  6788942 gta 6788940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 639 - 840
Target Start/End: Original strand, 1462728 - 1462932
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||     
T  1462728 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactagtacgagtttacctaaaattg 1462827  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagc---taatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgc 834  Q
    ||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  1462828 aaattttatacaatttattatatgcatgacatatgtaagctaataatataatactgtaaaaagatcaatagtgaaaaatatagactta-attataaatgc 1462926  T
Q  835 aaagta 840  Q
    ||||||    
T  1462927 aaagta 1462932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 638 - 765
Target Start/End: Original strand, 10110657 - 10110784
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  10110657 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgcacgagtttacctaaaatt 10110756  T
Q  738 aaaattttatacaatttattatatgcat 765  Q
    ||||||||||||||||||||||||||||    
T  10110757 aaaattttatacaatttattatatgcat 10110784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 643 - 761
Target Start/End: Complemental strand, 3001033 - 3000915
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||  ||| ||||||| || |||| ||||    
T  3001033 gttttacaactcgagagtttacctcaactcgttttatctaggaaaattcgactcgtaaactcgaatcgtgaacttttacaagtttacttaaaattgaaat 3000934  T
Q  743 tttatacaatttattatat 761  Q
    ||||||| |||||||||||    
T  3000933 tttatactatttattatat 3000915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 643 - 761
Target Start/End: Original strand, 31995655 - 31995773
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaat 742  Q
    ||||| ||||||||||||||||| |||||||||||| ||| |||||||  | | |||||||||| ||||||||||||||||||||||||| |||||||||    
T  31995655 gttttacaactcgagagtttaccacaactcgttttagctatgtaaacttaaattgtaaactcgactcgtaaactcgtacgagtttacctaaaattaaaat 31995754  T
Q  743 tttatacaatttattatat 761  Q
    | |||| ||||||||||||    
T  31995755 tatataaaatttattatat 31995773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 639 - 815
Target Start/End: Complemental strand, 16439480 - 16439316
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||             |||||||||||||| |||||    
T  16439480 caaggtttttcaactcgagagtttacctcaactcgttttgtctaggtaaactcgactcgagaactcg-------------tacgagtttacctaaaatta 16439394  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| ||||||||| || ||| |||||| ||||||||||||||| | |||| || ||||||||| |||||||    
T  16439393 aaattatataaaatttattacatacatgacatatataagctaatataataatataaataggtcaatagtgtaaaatat 16439316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 639 - 815
Target Start/End: Original strand, 31975066 - 31975230
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||  ||||             ||||||| |||||||| |||||    
T  31975066 caaggttttgcaactcgagagtttacctcaactcgtttcgcatagataaactcgactcgagaact-------------cgtacgattttacctaaaatta 31975152  T
Q  739 aaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    ||||| |||| |||||||||||||| | |||||| |||| |||||||||| |||||| | ||||||||||||||||||    
T  31975153 aaattatataaaatttattatatgcaagacatatataagataatataatattgtaaatatatcaatagtgaaaaatat 31975230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 697 - 854
Target Start/End: Complemental strand, 24202847 - 24202691
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaa 795  Q
    |||||||||| | || || ||||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||| |||| |||||||||| | ||||     
T  24202847 gtaaactcgacttgtgaattcgtacgagtttacctaaaattaaaattaaataaaatttattatatgcatgacatatataagttaatataatattataaat 24202748  T
Q  796 agatcaatagtgaaaaatatagacttactttataaatgcaaagtataccaaaccatcat 854  Q
    || ||||||||| ||||||| ||||||  ||| ||||| ||| |||||||||| |||||    
T  24202747 aggtcaatagtgtaaaatat-gactta-attagaaatggaaattataccaaactatcat 24202691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 715 - 815
Target Start/End: Original strand, 28900208 - 28900308
Alignment:
Q  715 ctcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaat 813  Q
    |||||||||||||||||| |||||||||| |||| ||||| |||||||||  |||||| ||||||||||||||| |||||| || |||||||||||||||    
T  28900208 ctcgtacgagtttaccta-aattaaaattatataaaatttcttatatgcaagacatatataagctaatataatattgtaaataggtcaatagtgaaaaat 28900306  T
Q  814 at 815  Q
    ||    
T  28900307 at 28900308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 638 - 794
Target Start/End: Original strand, 31534418 - 31534562
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatt 737  Q
    |||||||||||||||| ||||||||||||||| |||||||  || ||||||||||||||         ||     |||||||||||||||||||| ||||    
T  31534418 gcaaggttttgcaacttgagagtttacctcaaatcgttttgtctgggtaaactcgactc---------aag----aactcgtacgagtttacctaaaatt 31534504  T
Q  738 aaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaa 794  Q
    |||||| |||| |||||||||||||| | | |||| ||||||||||||||| ||||||    
T  31534505 aaaattatataaaatttattatatgcaagatatatttaagctaatataatattgtaaa 31534562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 640 - 765
Target Start/End: Original strand, 32567610 - 32567727
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaa 739  Q
    ||||||||| ||||| ||||||||||| ||||| |||| | ||||||||||||||||   |||||||      |||||||||||||||||||| ||||||    
T  32567610 aaggttttggaactcaagagtttaccttaactcattttgcttaggtaaactcgactc---aactcgag-----aactcgtacgagtttacctaaaattaa 32567701  T
Q  740 aattttatacaatttattatatgcat 765  Q
    |||| |||| ||||| ||||||||||    
T  32567702 aattatataaaatttgttatatgcat 32567727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 713 - 814
Target Start/End: Complemental strand, 2607658 - 2607556
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattatatgc-atacatatgtaagctaatataatactgtaaaaagatcaatagtgaaaa 811  Q
    |||||||||||||||||||| |||||||| | |||| |||||||||||| | | |||||| ||||| || |||||| |||||| || |||||||||||||    
T  2607658 aactcgtacgagtttacctaaaattaaaactatataaaatttattatattcaaaacatatataagccaacataatattgtaaataggtcaatagtgaaaa 2607559  T
Q  812 ata 814  Q
    |||    
T  2607558 ata 2607556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 643 - 705
Target Start/End: Original strand, 7834997 - 7835059
Alignment:
Q  643 gttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcg 705  Q
    ||||| ||||| |||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  7834997 gttttacaacttgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcg 7835059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 866 - 931
Target Start/End: Complemental strand, 2607484 - 2607419
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||||||| | || |||||||||||||||||    
T  2607484 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 2607419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 866 - 931
Target Start/End: Original strand, 31975278 - 31975343
Alignment:
Q  866 tatgcttaacttagtatcaaaatagaaaatttaacacacaaaagcgtaggtttcataagtctctaa 931  Q
    |||||| ||||||| ||||||||| |||| ||||| ||||||| | || |||||||||||||||||    
T  31975278 tatgctcaacttagcatcaaaatacaaaaattaacgcacaaaatcataagtttcataagtctctaa 31975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 639 - 695
Target Start/End: Complemental strand, 24202892 - 24202836
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgact 695  Q
    |||||||||  || |||||| |||| || ||||||||||||||||||||||||||||    
T  24202892 caaggttttataattcgagactttatcttaactcgttttacctaggtaaactcgact 24202836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 673
Target Start/End: Original strand, 28900169 - 28900203
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcg 673  Q
    ||||||||||||| |||||||||||||||||||||    
T  28900169 caaggttttgcaagtcgagagtttacctcaactcg 28900203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 639 - 688
Target Start/End: Complemental strand, 2607719 - 2607670
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaa 688  Q
    ||||||||||||| |||||| ||||| |||||||||||  ||||||||||    
T  2607719 caaggttttgcaattcgagaatttacttcaactcgtttcgcctaggtaaa 2607670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 697 - 787
Target Start/End: Complemental strand, 28042127 - 28042039
Alignment:
Q  697 gtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataata 787  Q
    |||||||||| |||  |||| ||||||||||||||| ||||||||   |||| |||||||||| | |||  ||||||||| |||||||||||    
T  28042127 gtaaactcgactcgagaacttgtacgagtttacctaaaattaaaa---tataaaatttattatttacatgtcatatgtaaactaatataata 28042039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 167; Significance: 7e-89; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 639 - 840
Target Start/End: Original strand, 16137 - 16338
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  16137 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 16236  T
Q  739 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatatagacttactttataaatgcaaa 837  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||    
T  16237 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaaaggatcaatagtgaaaaatatagactta-attataaatacaaa 16335  T
Q  838 gta 840  Q
    |||    
T  16336 gta 16338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 55; Significance: 5e-22; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 639 - 761
Target Start/End: Original strand, 25002 - 25111
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaatta 738  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||             |||||||||||||||||||||||||||| ||| |||||    
T  25002 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaa-------------actcgaatcgtaaactcgtacgagtttatctataatta 25088  T
Q  739 aaattttatacaatttattatat 761  Q
    |||||||||| ||||||||||||    
T  25089 aaattttataaaatttattatat 25111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 638 - 693
Target Start/End: Complemental strand, 2026 - 1971
Alignment:
Q  638 gcaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcga 693  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||    
T  2026 gcaaggttttacaactcgggagtttacctcaactcgttttagctatgtaaactcga 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 715 - 815
Target Start/End: Complemental strand, 9586 - 9486
Alignment:
Q  715 ctcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaat 813  Q
    |||||||||||||||||| |||||||||| |||| ||||| |||||||||  |||||| ||||||||||||||| |||||| || |||||||||||||||    
T  9586 ctcgtacgagtttaccta-aattaaaattatataaaatttcttatatgcaagacatatataagctaatataatattgtaaataggtcaatagtgaaaaat 9488  T
Q  814 at 815  Q
    ||    
T  9487 at 9486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 673
Target Start/End: Complemental strand, 9625 - 9591
Alignment:
Q  639 caaggttttgcaactcgagagtttacctcaactcg 673  Q
    ||||||||||||| |||||||||||||||||||||    
T  9625 caaggttttgcaagtcgagagtttacctcaactcg 9591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 698 - 806
Target Start/End: Complemental strand, 136265 - 136156
Alignment:
Q  698 taaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaa 796  Q
    ||||||||| |||  |||||| ||||||||||||| |||||||||| |||| |||||||||||| ||| |||||| ||||||||||||||||| |||| |    
T  136265 taaactcgactcgagaactcgcacgagtttacctaaaattaaaattatataaaatttattatatacatgacatatataagctaatataatactataaata 136166  T
Q  797 gatcaatagt 806  Q
    | ||||||||    
T  136165 ggtcaatagt 136156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 745 - 815
Target Start/End: Complemental strand, 89980 - 89909
Alignment:
Q  745 tatacaatttattatatgcat-acatatgtaagctaatataatactgtaaaaagatcaatagtgaaaaatat 815  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||| |||||||    
T  89980 tataaaatttattatatgcatgacatatgtaagctaatataatactgtaaataggtcagtagtgcaaaatat 89909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 38584 - 38486
Alignment:
Q  650 aactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctagaattaaaattttata 748  Q
    |||| ||||||||||||||||| ||||||| || ||||||| || |||| ||||||| | |||||| |||| |||||||||||  ||||||||| ||||    
T  38584 aacttgagagtttacctcaacttgttttacttatgtaaacttgaatcgtgaactcgatttgtaaacccgtatgagtttacctaacattaaaattatata 38486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 640 - 700
Target Start/End: Original strand, 36903 - 36963
Alignment:
Q  640 aaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaa 700  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||| |||| |||||||||    
T  36903 aaggttttgcaactcgaaagtttacctcaactcattttgcctaggtcaacttgactcgtaa 36963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 644 - 724
Target Start/End: Complemental strand, 174597 - 174517
Alignment:
Q  644 ttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgag 724  Q
    |||| |||||||||||||||  ||||||| |||||| ||  |||||| ||||||||||||||| |||  ||||| ||||||    
T  174597 ttttacaactcgagagtttagttcaactcattttacttaaataaacttgactcgtaaactcgattcgagaactcttacgag 174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 713 - 759
Target Start/End: Original strand, 4962 - 5008
Alignment:
Q  713 aactcgtacgagtttacctagaattaaaattttatacaatttattat 759  Q
    |||||||||||||||||||| ||||||||||  ||| ||||||||||    
T  4962 aactcgtacgagtttacctaaaattaaaattaaataaaatttattat 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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