View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4718-Insertion-12 (Length: 469)
Name: NF4718-Insertion-12
Description: NF4718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4718-Insertion-12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 8 - 469
Target Start/End: Original strand, 9400198 - 9400659
Alignment:
| Q |
8 |
aaagcaagtaacaaaaactaagacacattgcagtgcacaataaacgtattgtctagagagaaaattgattggtacataacgtgctataacatgcataatc |
107 |
Q |
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| T |
9400198 |
aaagcaagtaacaaaaactaagacacattgcagtgcacaataaacgtattgtctagagagaaaattgattggtacataacgtgctatagcatgcataatc |
9400297 |
T |
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| Q |
108 |
cttgtaaggatatgatttgagtctaacaaatcacctaattaaattgtaattttatccacatgaaaagattgataccttaattgatttgttaacaactggc |
207 |
Q |
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| T |
9400298 |
cttgtgaggatatgatttgagtctaacaaatcacctaattaaattgtaattttatccacatgaaaagattgataccttaattgatttgttaacaactggc |
9400397 |
T |
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| Q |
208 |
aaatgttattgattttacaataaaatagcatgacctacctatatgattaaacatttcttacattatcccaaaagaatttacgtgatttattggattacac |
307 |
Q |
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| T |
9400398 |
aaatgttattgattttacaataaaatagcatgacctacctatatgattaaacatttcttacattatcccaaaagaatttacgtgatttattggattacac |
9400497 |
T |
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| Q |
308 |
catacgaagtacaaaattgcagatgaagcttgtatataataactaagattatgtcgtttggcaattggcacattaacataacatactaacagaatcaacg |
407 |
Q |
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| T |
9400498 |
catacgaagtacaaaattgcagatgaagcttgtatataataactaagattatgtcgtttggtaattggcacattaacataacatactaacagaatcaacg |
9400597 |
T |
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| Q |
408 |
ttaaaaagtaacttaattagttaattatgatatatgtggatggtggtgaatatgtatattat |
469 |
Q |
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| T |
9400598 |
ttaaaaagtaacttaattagttaattatgatatatgtggatggtggtgaatatgtatattat |
9400659 |
T |
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