View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4718_low_14 (Length: 284)
Name: NF4718_low_14
Description: NF4718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4718_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 34558137 - 34558405
Alignment:
| Q |
1 |
attcaagatgagcttttcgctgccatatgttctccattgaacttgctcaaccaacataatgtgattccttttgcttgttagggattttaataatgttaat |
100 |
Q |
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| T |
34558137 |
attcaagatgagcttttcgctgccatatgttctccattgaacttgctcaaccaacataatgtgattccttttgcttgttagggattttaataatgttaat |
34558236 |
T |
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| Q |
101 |
attgttgacatactttcaaagaatgcaatatgggttctgctaaattggcttatgtagacttttatgttgatgggtctatttggcaaaattctaccataga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34558237 |
attgttgacatactttcaaagaatgcaatatgggttctgctaaattggcttatgtagacttttatgttgatgggtctatttggcaaaattctaccataga |
34558336 |
T |
|
| Q |
201 |
ggtcttctttaaagatagatcgaatctttccaattatcgagtttgttaagtttctttgatcagtttggt |
269 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34558337 |
ggtcttctttaaagatagatcaaatctttccaattatcgagtttgttaagtttctttgatcagtttggt |
34558405 |
T |
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