View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4718_low_3 (Length: 478)

Name: NF4718_low_3
Description: NF4718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4718_low_3
NF4718_low_3
[»] chr6 (28 HSPs)
chr6 (102-468)||(24588303-24588666)
chr6 (368-470)||(16625020-16625122)
chr6 (369-459)||(6112148-6112238)
chr6 (371-459)||(19772403-19772491)
chr6 (371-459)||(31477095-31477183)
chr6 (371-465)||(15704302-15704396)
chr6 (376-458)||(22949848-22949930)
chr6 (376-458)||(22953804-22953886)
chr6 (376-458)||(23872292-23872374)
chr6 (376-458)||(23876248-23876330)
chr6 (371-458)||(16760998-16761086)
chr6 (371-470)||(2077416-2077515)
chr6 (371-458)||(22806967-22807054)
chr6 (371-465)||(27324452-27324544)
chr6 (368-470)||(27073589-27073691)
chr6 (368-470)||(26981199-26981301)
chr6 (370-455)||(14073754-14073839)
chr6 (371-442)||(15991086-15991157)
chr6 (368-446)||(2862860-2862938)
chr6 (370-470)||(18387536-18387636)
chr6 (372-446)||(15640938-15641012)
chr6 (321-370)||(28963737-28963786)
chr6 (373-424)||(2759769-2759820)
chr6 (324-369)||(15509448-15509493)
chr6 (371-415)||(14322801-14322845)
chr6 (395-446)||(2882190-2882241)
chr6 (324-373)||(29157067-29157116)
chr6 (386-442)||(15645330-15645386)
[»] chr5 (31 HSPs)
chr5 (369-465)||(557305-557401)
chr5 (369-465)||(36936900-36936996)
chr5 (369-465)||(41997273-41997369)
chr5 (369-465)||(42002042-42002138)
chr5 (369-465)||(562077-562173)
chr5 (369-465)||(36941654-36941750)
chr5 (369-459)||(13300879-13300969)
chr5 (368-470)||(36949389-36949491)
chr5 (369-470)||(31732141-31732242)
chr5 (371-470)||(10754054-10754153)
chr5 (371-465)||(21323367-21323461)
chr5 (369-459)||(23976976-23977066)
chr5 (373-465)||(32460937-32461029)
chr5 (368-470)||(21826827-21826929)
chr5 (372-451)||(3666536-3666615)
chr5 (368-470)||(26869702-26869804)
chr5 (369-465)||(12044519-12044620)
chr5 (385-465)||(8770852-8770932)
chr5 (373-434)||(15395233-15395294)
chr5 (324-369)||(3667038-3667083)
chr5 (368-465)||(24435571-24435668)
chr5 (323-373)||(12044013-12044064)
chr5 (324-373)||(557857-557907)
chr5 (324-373)||(562627-562677)
chr5 (368-434)||(41099170-41099236)
chr5 (324-370)||(42002598-42002645)
chr5 (324-373)||(36936393-36936443)
chr5 (324-373)||(36941147-36941197)
chr5 (324-373)||(41997804-41997854)
chr5 (324-373)||(32460427-32460477)
chr5 (399-439)||(1429584-1429624)
[»] chr3 (48 HSPs)
chr3 (369-465)||(3034252-3034348)
chr3 (369-465)||(3693227-3693323)
chr3 (369-465)||(8888539-8888635)
chr3 (369-465)||(3673195-3673291)
chr3 (369-465)||(8070288-8070384)
chr3 (369-465)||(8883779-8883875)
chr3 (371-470)||(9706982-9707081)
chr3 (371-470)||(16749311-16749410)
chr3 (371-470)||(19776489-19776588)
chr3 (369-465)||(10585579-10585675)
chr3 (368-465)||(6595781-6595878)
chr3 (368-465)||(18350163-18350260)
chr3 (371-459)||(22758571-22758659)
chr3 (368-464)||(51922944-51923040)
chr3 (371-458)||(37438951-37439038)
chr3 (376-458)||(4106722-4106804)
chr3 (376-458)||(4110574-4110656)
chr3 (368-470)||(8223539-8223641)
chr3 (368-470)||(14425231-14425333)
chr3 (376-458)||(15965671-15965753)
chr3 (376-458)||(15969595-15969677)
chr3 (376-458)||(15973519-15973601)
chr3 (373-470)||(45903938-45904035)
chr3 (368-470)||(29832-29934)
chr3 (368-470)||(8197056-8197158)
chr3 (371-470)||(8488782-8488880)
chr3 (368-442)||(35456328-35456401)
chr3 (402-470)||(18699200-18699268)
chr3 (368-446)||(47540907-47540985)
chr3 (368-446)||(11997395-11997472)
chr3 (368-434)||(12899131-12899197)
chr3 (386-446)||(429057-429117)
chr3 (324-373)||(8070838-8070888)
chr3 (375-448)||(53358730-53358805)
chr3 (419-470)||(14671997-14672048)
chr3 (368-415)||(16023191-16023238)
chr3 (324-373)||(3034805-3034855)
chr3 (324-373)||(3673727-3673777)
chr3 (324-373)||(8884332-8884382)
chr3 (324-373)||(8889078-8889128)
chr3 (368-446)||(16043129-16043207)
chr3 (371-424)||(18011990-18012043)
chr3 (368-413)||(49020114-49020159)
chr3 (387-426)||(3166194-3166233)
chr3 (324-370)||(3693784-3693831)
chr3 (368-446)||(16048621-16048699)
chr3 (371-424)||(19340123-19340176)
chr3 (373-422)||(47540522-47540571)
[»] chr1 (31 HSPs)
chr1 (369-465)||(40232777-40232873)
chr1 (369-459)||(41097347-41097437)
chr1 (369-458)||(3094705-3094794)
chr1 (368-468)||(17213832-17213932)
chr1 (371-470)||(39243414-39243513)
chr1 (371-470)||(39246969-39247068)
chr1 (368-465)||(13893925-13894022)
chr1 (371-459)||(41387366-41387454)
chr1 (368-459)||(14819587-14819678)
chr1 (376-458)||(1924450-1924532)
chr1 (368-470)||(14804108-14804210)
chr1 (376-458)||(20923464-20923546)
chr1 (368-470)||(21498255-21498357)
chr1 (368-470)||(22428584-22428685)
chr1 (368-465)||(1067090-1067187)
chr1 (368-470)||(26198962-26199064)
chr1 (368-465)||(52100610-52100706)
chr1 (395-459)||(16836701-16836765)
chr1 (368-470)||(2367647-2367749)
chr1 (368-470)||(2384634-2384736)
chr1 (369-470)||(19725295-19725394)
chr1 (387-459)||(33055651-33055723)
chr1 (368-441)||(23285227-23285300)
chr1 (372-420)||(8267244-8267292)
chr1 (377-441)||(23254584-23254648)
chr1 (372-465)||(19726975-19727067)
chr1 (400-465)||(26319593-26319658)
chr1 (327-373)||(27307360-27307406)
chr1 (372-434)||(27308280-27308342)
chr1 (324-373)||(8273059-8273108)
chr1 (324-370)||(14204447-14204495)
[»] chr8 (29 HSPs)
chr8 (369-459)||(31449254-31449344)
chr8 (369-465)||(4237730-4237826)
chr8 (369-465)||(4242469-4242565)
chr8 (369-468)||(43302073-43302172)
chr8 (369-470)||(8330752-8330853)
chr8 (369-465)||(37772316-37772412)
chr8 (368-465)||(4582684-4582781)
chr8 (371-470)||(21384348-21384447)
chr8 (371-470)||(21387768-21387867)
chr8 (376-458)||(18861966-18862048)
chr8 (369-459)||(25367375-25367465)
chr8 (368-470)||(19393119-19393221)
chr8 (376-458)||(21827335-21827417)
chr8 (368-470)||(22104279-22104381)
chr8 (373-470)||(34818099-34818196)
chr8 (371-459)||(21411638-21411726)
chr8 (371-459)||(21806130-21806218)
chr8 (370-465)||(16066607-16066702)
chr8 (371-470)||(23915096-23915195)
chr8 (368-446)||(14036083-14036161)
chr8 (405-465)||(25733590-25733650)
chr8 (324-373)||(31448747-31448797)
chr8 (322-373)||(4237222-4237274)
chr8 (324-373)||(4241963-4242013)
chr8 (368-414)||(17153198-17153244)
chr8 (368-414)||(17157440-17157486)
chr8 (367-441)||(42972749-42972823)
chr8 (323-366)||(14036609-14036654)
chr8 (381-446)||(15197266-15197331)
[»] scaffold0182 (2 HSPs)
scaffold0182 (373-465)||(9273-9365)
scaffold0182 (324-373)||(8764-8814)
[»] chr2 (26 HSPs)
chr2 (369-465)||(10160109-10160205)
chr2 (368-464)||(25375499-25375595)
chr2 (371-458)||(1284130-1284217)
chr2 (369-468)||(30658783-30658882)
chr2 (371-468)||(28855737-28855833)
chr2 (368-464)||(34070029-34070125)
chr2 (371-470)||(23068144-23068243)
chr2 (376-458)||(30344312-30344394)
chr2 (368-459)||(22845017-22845108)
chr2 (368-470)||(26897231-26897333)
chr2 (371-470)||(42248831-42248930)
chr2 (368-470)||(6856801-6856903)
chr2 (368-470)||(24292850-24292952)
chr2 (368-470)||(24286282-24286384)
chr2 (368-470)||(30635397-30635502)
chr2 (373-465)||(377683-377775)
chr2 (385-465)||(7559756-7559836)
chr2 (371-470)||(9785754-9785851)
chr2 (369-459)||(6297282-6297371)
chr2 (368-426)||(17327708-17327766)
chr2 (368-442)||(17452974-17453053)
chr2 (324-370)||(35602757-35602804)
chr2 (324-373)||(10159601-10159651)
chr2 (319-373)||(30659318-30659373)
chr2 (400-462)||(30637112-30637177)
chr2 (368-446)||(30641499-30641577)
[»] chr7 (43 HSPs)
chr7 (369-459)||(8076665-8076755)
chr7 (369-465)||(9650349-9650445)
chr7 (369-470)||(27256841-27256942)
chr7 (371-458)||(18426543-18426630)
chr7 (369-470)||(40864752-40864853)
chr7 (371-459)||(20488563-20488651)
chr7 (368-459)||(8954655-8954746)
chr7 (371-470)||(16459772-16459871)
chr7 (371-458)||(45169322-45169409)
chr7 (373-459)||(20485202-20485288)
chr7 (371-470)||(14928027-14928126)
chr7 (371-470)||(15351493-15351592)
chr7 (368-442)||(9008789-9008863)
chr7 (371-470)||(14259610-14259709)
chr7 (387-470)||(29727211-29727294)
chr7 (368-470)||(845996-846098)
chr7 (368-470)||(853373-853475)
chr7 (368-470)||(1211377-1211479)
chr7 (368-465)||(838820-838917)
chr7 (368-465)||(1204000-1204097)
chr7 (371-470)||(32302443-32302542)
chr7 (410-465)||(47102148-47102203)
chr7 (368-442)||(10532221-10532295)
chr7 (369-459)||(19640914-19641004)
chr7 (370-465)||(36477586-36477674)
chr7 (370-442)||(10499494-10499566)
chr7 (370-442)||(10504523-10504595)
chr7 (372-456)||(11017473-11017557)
chr7 (372-459)||(19096869-19096957)
chr7 (368-442)||(13343817-13343891)
chr7 (324-373)||(9649844-9649893)
chr7 (371-459)||(16580844-16580932)
chr7 (377-440)||(2629290-2629353)
chr7 (324-373)||(47102692-47102742)
chr7 (371-446)||(1043847-1043922)
chr7 (372-446)||(11297381-11297455)
chr7 (368-439)||(15566012-15566081)
chr7 (324-370)||(43457097-43457143)
chr7 (368-441)||(10488686-10488759)
chr7 (324-369)||(10499011-10499056)
chr7 (324-369)||(10504040-10504085)
chr7 (324-369)||(13343311-13343356)
chr7 (333-373)||(23866884-23866924)
[»] scaffold0205 (1 HSPs)
scaffold0205 (371-470)||(30871-30970)
[»] scaffold0034 (1 HSPs)
scaffold0034 (371-470)||(121170-121269)
[»] scaffold0019 (1 HSPs)
scaffold0019 (368-470)||(30288-30390)
[»] scaffold0009 (1 HSPs)
scaffold0009 (368-465)||(71740-71838)
[»] chr4 (30 HSPs)
chr4 (368-470)||(15225769-15225871)
chr4 (369-470)||(7902500-7902601)
chr4 (369-465)||(13521374-13521470)
chr4 (375-459)||(47575277-47575361)
chr4 (369-459)||(31297884-31297974)
chr4 (369-470)||(34561028-34561129)
chr4 (369-465)||(3997451-3997547)
chr4 (371-458)||(12488414-12488501)
chr4 (368-470)||(14868456-14868558)
chr4 (368-470)||(14877376-14877478)
chr4 (371-470)||(10713544-10713643)
chr4 (371-470)||(10927314-10927413)
chr4 (368-459)||(14899004-14899095)
chr4 (371-470)||(15011207-15011306)
chr4 (376-458)||(14953451-14953533)
chr4 (376-458)||(25690610-25690692)
chr4 (368-470)||(8660791-8660893)
chr4 (368-470)||(9185072-9185174)
chr4 (368-470)||(9190937-9191039)
chr4 (368-463)||(26034799-26034894)
chr4 (401-459)||(41817397-41817455)
chr4 (368-463)||(39320173-39320267)
chr4 (324-373)||(13520869-13520918)
chr4 (372-440)||(52742616-52742684)
chr4 (419-470)||(18023225-18023276)
chr4 (378-424)||(32545533-32545579)
chr4 (368-441)||(26188056-26188129)
chr4 (373-446)||(55073774-55073847)
chr4 (371-415)||(43477408-43477452)
chr4 (324-370)||(39320722-39320768)
[»] scaffold0060 (2 HSPs)
scaffold0060 (369-470)||(47362-47463)
scaffold0060 (369-470)||(52306-52407)
[»] scaffold0572 (1 HSPs)
scaffold0572 (371-470)||(10367-10466)
[»] scaffold0144 (1 HSPs)
scaffold0144 (371-470)||(7481-7580)
[»] scaffold0229 (1 HSPs)
scaffold0229 (371-458)||(10817-10904)
[»] scaffold0157 (1 HSPs)
scaffold0157 (371-458)||(31976-32063)
[»] scaffold0141 (1 HSPs)
scaffold0141 (371-458)||(13403-13490)
[»] scaffold0124 (1 HSPs)
scaffold0124 (371-458)||(21377-21464)
[»] scaffold0011 (1 HSPs)
scaffold0011 (371-470)||(127007-127106)
[»] scaffold0132 (1 HSPs)
scaffold0132 (368-470)||(24684-24786)
[»] scaffold0041 (1 HSPs)
scaffold0041 (369-470)||(35093-35194)
[»] scaffold0452 (1 HSPs)
scaffold0452 (371-459)||(12359-12447)
[»] scaffold0431 (1 HSPs)
scaffold0431 (371-459)||(14868-14956)
[»] scaffold0061 (1 HSPs)
scaffold0061 (369-457)||(49373-49461)
[»] scaffold0020 (1 HSPs)
scaffold0020 (369-465)||(629-725)
[»] scaffold0017 (1 HSPs)
scaffold0017 (369-457)||(149173-149261)
[»] scaffold0415 (1 HSPs)
scaffold0415 (376-458)||(1104-1186)
[»] scaffold0327 (1 HSPs)
scaffold0327 (368-470)||(19610-19712)
[»] scaffold0044 (2 HSPs)
scaffold0044 (368-470)||(81162-81264)
scaffold0044 (368-459)||(64775-64866)
[»] scaffold0015 (2 HSPs)
scaffold0015 (368-470)||(193655-193757)
scaffold0015 (371-470)||(187972-188071)
[»] scaffold0070 (2 HSPs)
scaffold0070 (369-470)||(59030-59131)
scaffold0070 (369-418)||(63284-63333)
[»] scaffold1910 (1 HSPs)
scaffold1910 (370-465)||(475-570)
[»] scaffold0031 (1 HSPs)
scaffold0031 (371-458)||(35402-35489)
[»] scaffold0575 (1 HSPs)
scaffold0575 (372-470)||(5273-5371)
[»] scaffold0357 (1 HSPs)
scaffold0357 (368-470)||(3735-3837)
[»] scaffold0018 (1 HSPs)
scaffold0018 (371-465)||(21916-22010)
[»] scaffold0628 (2 HSPs)
scaffold0628 (371-459)||(7003-7091)
scaffold0628 (324-370)||(5831-5877)
[»] scaffold0292 (1 HSPs)
scaffold0292 (371-465)||(7776-7870)
[»] scaffold0008 (2 HSPs)
scaffold0008 (368-442)||(256444-256518)
scaffold0008 (333-370)||(257801-257838)
[»] scaffold0004 (1 HSPs)
scaffold0004 (370-470)||(199796-199894)
[»] scaffold0932 (1 HSPs)
scaffold0932 (368-446)||(1027-1105)
[»] scaffold0478 (1 HSPs)
scaffold0478 (368-446)||(8215-8293)
[»] scaffold0096 (1 HSPs)
scaffold0096 (411-463)||(22320-22372)
[»] scaffold0720 (1 HSPs)
scaffold0720 (368-446)||(5939-6017)
[»] scaffold0045 (1 HSPs)
scaffold0045 (324-369)||(84074-84120)
[»] scaffold0232 (1 HSPs)
scaffold0232 (380-441)||(22583-22644)
[»] scaffold0155 (1 HSPs)
scaffold0155 (412-465)||(22284-22337)


Alignment Details
Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 102 - 468
Target Start/End: Original strand, 24588303 - 24588666
Alignment:
Q  102 gtctcatatttgaacctgaatttagaaatcaactaaattaaaactcttaattgccgtctatttaggtccaacaagcaggtctgaggtattaatcttcctt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24588303 gtctcatatttgaacctgaatttagaaatcaactaaattaaaactcttaattgccgtctatttagatccaacaagcaggtctgaggtattaatcttcctt 24588402  T
Q  202 actactcnnnnnnnnnnnnnnnnttgatctttatattcttaagttcgtcatgcatataccagctcgagccaagaacaataaggttgaggcatgaacctca 301  Q
    ||||||                 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24588403 actact---tgggaaaaaaaaagttgatctttttattcttaagttcgtcatgcatataccagctcgagccaagaacaataaggttgaggcatgaacctca 24588499  T
Q  302 aactaatagatcacttgggaagtgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattcccaaagtttctcacttattagttttgaattt 401  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24588500 aaccaatagatcacttgggaagtgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattcccaaaggttctcacttattagttttgaattt 24588599  T
Q  402 tctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24588600 tctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatg 24588666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 16625122 - 16625020
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |    
T  16625122 ttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgt 16625023  T
Q  468 gct 470  Q
    |||    
T  16625022 gct 16625020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 6112148 - 6112238
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6112148 tcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattcaacacaccgaaattcacagttgatg 6112238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 19772403 - 19772491
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  19772403 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 19772491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 31477095 - 31477183
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  31477095 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgatg 31477183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 371 - 465
Target Start/End: Original strand, 15704302 - 15704396
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||    
T  15704302 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgagattcacagttgatgcttcct 15704396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 22949930 - 22949848
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 22953886 - 22953804
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22953804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 23872374 - 23872292
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23872292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 23876330 - 23876248
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23876248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 16761086 - 16760998
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctc-tataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  16761086 ccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16760998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 2077515 - 2077416
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||||| |||||| | || | || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  2077515 ccaaagtttctcactttttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 2077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 22807054 - 22806967
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||| ||||||||| | || | ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  22807054 ccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgat 22806967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 465
Target Start/End: Original strand, 27324452 - 27324544
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||| |||||    
T  27324452 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgatgcttcct 27324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 27073691 - 27073589
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||  |||||||   || ||||||| ||||||||||||||||| |    
T  27073691 ttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgtttcctgt 27073592  T
Q  468 gct 470  Q
    |||    
T  27073591 gct 27073589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 26981301 - 26981199
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||  |||||||   || ||||||| ||||||||||| ||||| |    
T  26981301 ttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgcttcctgt 26981202  T
Q  468 gct 470  Q
    |||    
T  26981201 gct 26981199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 455
Target Start/End: Complemental strand, 14073839 - 14073754
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagtt 455  Q
    ||||||||||||||  |||||||| |||| ||||||||||||||||||||||| ||| ||||||||  || |||||||||||||||    
T  14073839 cccaaagtttctcatctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagtt 14073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 442
Target Start/End: Original strand, 15991086 - 15991157
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| | |  | |||||||||||||||||    
T  15991086 ccaaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacacc 15991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 2862860 - 2862938
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||| | ||| || || || |||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  2862860 ttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacaccgaaa 2862938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 470
Target Start/End: Complemental strand, 18387636 - 18387536
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgc 469  Q
    ||||||||||||||| ||||| || |||| ||||| ||||||||||||||||||||| ||||||    || || ||| |||||||||||| ||||| |||    
T  18387636 cccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatgattcctgtgc 18387537  T
Q  470 t 470  Q
    |    
T  18387536 t 18387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 446
Target Start/End: Complemental strand, 15641012 - 15640938
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||| |||| |||||||| |||||| ||||||||||||| ||||||||| | | ||||| |||||||||||    
T  15641012 caaagtttatcacgtattagttgtgaattctctctataaatagtgagctcacataattcattcaacacaccgaaa 15640938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 28963737 - 28963786
Alignment:
Q  321 aagtgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 370  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  28963737 aagtgttggaacatgtgtggaaattgagttaaaagaccaaacacaaattc 28963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 2759769 - 2759820
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcaca 424  Q
    ||||||||| ||||||||||| |||||||||||| |||| ||||||||||||    
T  2759769 aaagtttcttacttattagttgtgaattttctctgtaaacagagagctcaca 2759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 15509493 - 15509448
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 369  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||    
T  15509493 tgttggaacatatgtgaaaattaagttaaaagactaaacacaaatt 15509448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 14322801 - 14322845
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaataga 415  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||    
T  14322801 ccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 2882190 - 2882241
Alignment:
Q  395 tgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||||||||  |||||||||| ||| ||||||| |||||||||    
T  2882190 tgaattttctctataaattcagagctcacatagttcattccatacaccgaaa 2882241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 29157067 - 29157116
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    ||||||||||||  | |||||||||| |||||||| ||||||||||||||    
T  29157067 tgttggaacatgcatagaaattaagttaaaagactgaacacaaattccca 29157116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 15645386 - 15645330
Alignment:
Q  386 tattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    ||||||||  ||||||||| ||||||||||||||||||| | | ||||| |||||||    
T  15645386 tattagttgcgaattttctatataaatagagagctcacataatccattctacacacc 15645330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 557401 - 557305
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  557401 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 557305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 36936900 - 36936996
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36936900 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 36936996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 41997369 - 41997273
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41997369 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 41997273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 42002138 - 42002042
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42002138 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 42002042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 562173 - 562077
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  562173 tcccaaagtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 36941654 - 36941750
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  36941654 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacaccgaaattcacagttgatgcttcct 36941750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 13300879 - 13300969
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13300879 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 13300969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 36949491 - 36949389
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |    
T  36949491 ttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattcaacacaccgaaaatcacaattgatgtttcctgt 36949392  T
Q  468 gct 470  Q
    |||    
T  36949391 gct 36949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 31732242 - 31732141
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  31732242 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 31732143  T
Q  469 ct 470  Q
    ||    
T  31732142 ct 31732141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 10754153 - 10754054
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  10754153 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10754054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 371 - 465
Target Start/End: Original strand, 21323367 - 21323461
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||    
T  21323367 ccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgttttccatacaccgaaattcacagttgatgcttcct 21323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 23976976 - 23977066
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23976976 tcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacactgaaattcacagttgatg 23977066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 373 - 465
Target Start/End: Original strand, 32460937 - 32461029
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  32460937 aaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacaccgaaattcacagttgatgcttcct 32461029  T

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Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 21826929 - 21826827
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||| |    
T  21826929 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgatgattcctgt 21826830  T
Q  468 gct 470  Q
    |||    
T  21826829 gct 21826827  T

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Target: chr5; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 3666615 - 3666536
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcac 451  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  3666615 caaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattctacacaccgaaattcac 3666536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 26869702 - 26869804
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  26869702 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgt 26869801  T
Q  468 gct 470  Q
    |||    
T  26869802 gct 26869804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 12044519 - 12044620
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca-----cagtgcattccacacaccgaaattcacagttgatgtttc 463  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||     |||||||||||||||||||||||||| |||||||| |||    
T  12044519 tcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcacacacagcagtgcattccacacaccgaaattcaaagttgatgcttc 12044618  T
Q  464 ct 465  Q
    ||    
T  12044619 ct 12044620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 8770932 - 8770852
Alignment:
Q  385 ttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| |||||    
T  8770932 ttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacactgaaattcacagttgatgcttcct 8770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 15395233 - 15395294
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 434  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  15395233 aaagttactcacttattagttgtgaattttctctataaatagagagctcactcggtgcattc 15395294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 3667083 - 3667038
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 369  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  3667083 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaatt 3667038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 24435571 - 24435668
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||| ||||| | ||||||||||||   ||| |||||||||||||||||||||| ||||||||||||  ||||||||| | |||||| |||| |||||    
T  24435571 ttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattcttcacaccgaattccacagtcgatgattcct 24435668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 373
Target Start/End: Original strand, 12044013 - 12044064
Alignment:
Q  323 gtgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  12044013 gtgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 12044064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 557907 - 557857
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  557907 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 562677 - 562627
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  562677 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 562627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 434
Target Start/End: Complemental strand, 41099236 - 41099170
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 434  Q
    |||||||||||| |||| ||||||||  ||| ||||||||||||||||| ||||||||| |||||||    
T  41099236 ttcccaaagtttatcacctattagttgggaagtttctctataaatagagggctcacacaatgcattc 41099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 42002645 - 42002598
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 370  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  42002645 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattc 42002598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 36936393 - 36936443
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 36936443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 36941147 - 36941197
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  36941147 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 36941197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 41997854 - 41997804
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  41997854 tgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattccca 41997804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 32460427 - 32460477
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||    
T  32460427 tgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattccca 32460477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 1429584 - 1429624
Alignment:
Q  399 ttttctctataaatagagagctcacacagtgcattccacac 439  Q
    |||| ||||||||||||||||||||| ||||||||| ||||    
T  1429584 ttttttctataaatagagagctcacatagtgcattctacac 1429624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 3e-40; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 3034348 - 3034252
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3034348 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 3034252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 3693323 - 3693227
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3693323 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 3693227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 8888635 - 8888539
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8888635 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 8888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 3673291 - 3673195
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3673291 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacactgaaattcacagttgatgcttcct 3673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 8070384 - 8070288
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  8070384 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacaccgaaattcacagttgatgcttcct 8070288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 8883875 - 8883779
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  8883875 tcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacaccgaaattcacagttgatgcttcct 8883779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 9706982 - 9707081
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  9706982 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 9707081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 16749311 - 16749410
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  16749311 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 16749410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 19776588 - 19776489
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  19776588 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 19776489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 10585579 - 10585675
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||| |||||    
T  10585579 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccaaaattcacagttgatgcttcct 10585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 6595781 - 6595878
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||| | ||||||| |||||||| |||||    
T  6595781 ttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcattttacacatcaaaattcatagttgatgcttcct 6595878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 18350163 - 18350260
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  18350163 ttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcct 18350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 22758571 - 22758659
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||| ||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22758571 ccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 22758659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 51923040 - 51922944
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 464  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||||| ||||    
T  51923040 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcc 51922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 37438951 - 37439038
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||    
T  37438951 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgat 37439038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 4106722 - 4106804
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 4106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 4110574 - 4110656
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 4110656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 8223641 - 8223539
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  8223641 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgt 8223542  T
Q  468 gct 470  Q
    |||    
T  8223541 gct 8223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 14425231 - 14425333
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | |||| |||||||| |||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  14425231 ttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgattcctgt 14425330  T
Q  468 gct 470  Q
    |||    
T  14425331 gct 14425333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 15965753 - 15965671
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15965671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 15969677 - 15969595
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15969595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 15973601 - 15973519
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgat 15973519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 373 - 470
Target Start/End: Original strand, 45903938 - 45904035
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||| ||| | |||||||||||||||||| ||||||||| ||||    
T  45903938 aaagtttctcacttattactttggaactttctctataaatagagagctcacaatgtgctttcaatacaccgaaattcacagttaatgtttcctgtgct 45904035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 29934 - 29832
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||| ||||||||||||| ||||||||| |||||||   |||||||||||||||| ||||| ||||| |    
T  29934 ttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgatgattcctgt 29835  T
Q  468 gct 470  Q
    |||    
T  29834 gct 29832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 8197158 - 8197056
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||    || ||||||||||||||||||| ||||| |    
T  8197158 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgt 8197059  T
Q  468 gct 470  Q
    |||    
T  8197058 gct 8197056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 8488782 - 8488880
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||| ||||| ||||||||||| | |||||||||| ||||| ||||    
T  8488782 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgatgcttcctgtgct 8488880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 35456328 - 35456401
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||||    
T  35456328 ttcccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacacc 35456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 18699200 - 18699268
Alignment:
Q  402 tctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||| ||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgct 18699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 47540907 - 47540985
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||| ||| ||||| ||||| |||||    
T  47540907 ttcccaaagtttctcacatattagttgtgaattttctctataaatagaaagttcacatagttcattctacacatcgaaa 47540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 11997395 - 11997472
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||  ||| ||||| |||||| ||||    
T  11997395 ttcccaaagtttctcaat-attagttgtgaattttctctataaatagagagctcacgtagtacattctacacactgaaa 11997472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 434
Target Start/End: Original strand, 12899131 - 12899197
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 434  Q
    |||||||||||||||||||||||| | |||||||||||||||||||  ||| ||||| |||||||||    
T  12899131 ttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattc 12899197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 429117 - 429057
Alignment:
Q  386 tattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||| || ||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  429117 tattacttgtgaattttctctataaataaagagctcacaaagttcattccacacaccgaaa 429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 8070888 - 8070838
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8070888 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 8070838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 53358805 - 53358730
Alignment:
Q  375 agtttctcacttattagttttgaattttctctataaatagagagctca--cacagtgcattccacacaccgaaatt 448  Q
    ||||| ||||||||||||| |||| ||||| |||||||||||||||||  |||| ||||||| |||||||| ||||    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcacacacaatgcattctacacaccgtaatt 53358730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 419 - 470
Target Start/End: Complemental strand, 14672048 - 14671997
Alignment:
Q  419 ctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||| ||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgct 14671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 415
Target Start/End: Complemental strand, 16023238 - 16023191
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaataga 415  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  16023238 ttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 3034855 - 3034805
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3034855 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 3034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 3673777 - 3673727
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  3673777 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 3673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 8884382 - 8884332
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8884382 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattccca 8884332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 8889128 - 8889078
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattccca 8889078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 16043207 - 16043129
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||||||| ||||||||||||   ||| ||||||||||||||||| |||| || | |||||||  ||||||||||    
T  16043207 ttcccaaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgcattcttcacaccgaaa 16043129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 18012043 - 18011990
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca 424  Q
    ||||||||| |||| |||||||| ||||||||||||||||||| | ||||||||    
T  18012043 ccaaagtttatcacatattagttgtgaattttctctataaataaatagctcaca 18011990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 49020159 - 49020114
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaata 413  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||    
T  49020159 ttcccaaaatttatcacttattagttgtgaattttctctataaata 49020114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 3166194 - 3166233
Alignment:
Q  387 attagttttgaattttctctataaatagagagctcacaca 426  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  3166194 attagttatgaattttttctataaatagagagctcacaca 3166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 3693831 - 3693784
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 370  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||    
T  3693831 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattc 3693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 16048699 - 16048621
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||||||| ||||||||||||   ||| ||||||||||||||||| |||| || | || ||||  ||||||||||    
T  16048699 ttcccaaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgtattcttcacaccgaaa 16048621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 19340176 - 19340123
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcaca 424  Q
    ||||||||||| || ||||| || |||||||||| |||||||||| ||||||||    
T  19340176 ccaaagtttctaacatattatttgtgaattttctttataaatagatagctcaca 19340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 47540522 - 47540571
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctca 422  Q
    |||||||||||| |||||||| ||||||||||||| ||||| || |||||    
T  47540522 aaagtttctcacatattagttgtgaattttctctaaaaataaagggctca 47540571  T

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Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 40232777 - 40232873
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40232777 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 40232873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 41097347 - 41097437
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41097347 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 41097437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 3094794 - 3094705
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3094794 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacaccgaaattcacagttgat 3094705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 368 - 468
Target Start/End: Original strand, 17213832 - 17213932
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| | ||||||||||| | ||||||||||||||||    
T  17213832 ttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtacattcgatacaccgaaatttatagttgatgtttcctat 17213931  T
Q  468 g 468  Q
    |    
T  17213932 g 17213932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 39243414 - 39243513
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  39243414 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 39243513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 39246969 - 39247068
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  39246969 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 39247068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 368 - 465
Target Start/End: Complemental strand, 13894022 - 13893925
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||||| |||| |||||||||||| |||||    
T  13894022 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaatgcattctacacactgaaaatcacagttgatgcttcct 13893925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 41387366 - 41387454
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41387366 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 41387454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 14819678 - 14819587
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||| | || |||||||||||||||||||    
T  14819678 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgatg 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 1924450 - 1924532
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1924532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 14804210 - 14804108
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| || ||||||| | || ||||||||||||||||||| ||||| |    
T  14804210 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgatgattcctgt 14804111  T
Q  468 gct 470  Q
    |||    
T  14804110 gct 14804108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 20923464 - 20923546
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 20923546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 21498357 - 21498255
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||| |    
T  21498357 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcctgt 21498258  T
Q  468 gct 470  Q
    |||    
T  21498257 gct 21498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 22428584 - 22428685
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  22428584 ttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgatgattcctgt 22428682  T
Q  468 gct 470  Q
    |||    
T  22428683 gct 22428685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 465
Target Start/End: Complemental strand, 1067187 - 1067090
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    ||| |||||||||||||||||| |||||    
T  1067187 ttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacacattgcattatggacaacgaaattcacagttgatgcttcct 1067090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 26199064 - 26198962
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||| |||| | |||| | |||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  26199064 ttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgt 26198965  T
Q  468 gct 470  Q
    |||    
T  26198964 gct 26198962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 52100610 - 52100706
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||  ||||||||||| |||||    
T  52100610 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttgatgattcct 52100706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 16836701 - 16836765
Alignment:
Q  395 tgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16836701 tgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatg 16836765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 2367749 - 2367647
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | | ||  |||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| ||||| |    
T  2367749 ttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgt 2367650  T
Q  468 gct 470  Q
    |||    
T  2367649 gct 2367647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 2384634 - 2384736
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | | ||  |||||||||||||||||||||||||| |||||||   |||| ||||||||||||||||| ||||| |    
T  2384634 ttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgt 2384733  T
Q  468 gct 470  Q
    |||    
T  2384734 gct 2384736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 19725295 - 19725394
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||| |||||||    ||||||||||||||||||||| ||||| ||    
T  19725295 tcccaaagtttctcatttattagttgtga--tttctctataaatagagagttcacacattgcattctgggcaccgaaattcacagttgatgcttcctgtg 19725392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 459
Target Start/End: Complemental strand, 33055723 - 33055651
Alignment:
Q  387 attagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatg 33055651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 23285227 - 23285300
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    ||||||||| ||||||| ||||| || ||||||||||||||||||||| ||| |||| | ||||||| ||||||    
T  23285227 ttcccaaaggttctcacatattaattgtgaattttctctataaatagatagcccacaaattgcattctacacac 23285300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 8267244 - 8267292
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagct 420  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  8267244 caaagtttatcacttattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 441
Target Start/End: Original strand, 23254584 - 23254648
Alignment:
Q  377 tttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    |||||||| ||||| || | ||||||||||||||||||||||| |||| ||||||||| ||||||    
T  23254584 tttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacac 23254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 465
Target Start/End: Complemental strand, 19727067 - 19726975
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||| ||||||| ||||||||| ||   |||||| ||||||||||||||||||||  ||||||   | |||||||||||||||||||| |||||    
T  19727067 caaaatttctcatttattagttgtgtgatttctcgataaatagagagctcacaca-agcattctggataccgaaattcacagttgatgcttcct 19726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 26319593 - 26319658
Alignment:
Q  400 tttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||||| |||||||||||| |||||||  |||||| |||  ||||||||||| |||||    
T  26319593 tttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcct 26319658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 27307360 - 27307406
Alignment:
Q  327 tggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||||    
T  27307360 tggaacatgtgtggatattgaggtaaaagactaaacacaaattccca 27307406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 434
Target Start/End: Original strand, 27308280 - 27308342
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattc 434  Q
    |||||||||||   |||||||  |||||||||||||||||||||| ||||||| ||| |||||    
T  27308280 caaagtttctcttatattagtagtgaattttctctataaatagagtgctcacatagttcattc 27308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 8273059 - 8273108
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    ||||| |||||||||||||||| ||| |||| | ||||||||||||||||    
T  8273059 tgttgaaacatgtgtggaaattgagttaaaaaaataaacacaaattccca 8273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 14204447 - 14204495
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagac--taaacacaaattc 370  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  14204447 tgttggaacatgtgtggaaattgagtaaaaagtctataaacacaaattc 14204495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 31449254 - 31449344
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31449254 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 31449344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 4237730 - 4237826
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  4237730 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcct 4237826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 4242469 - 4242565
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  4242469 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatgcttcct 4242565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 369 - 468
Target Start/End: Original strand, 43302073 - 43302172
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  43302073 tcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattccacacatcgaaattcacagttgatgcttcctatg 43302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 8330752 - 8330853
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||    
T  8330752 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacaccgaaattcacagttgatgcttcctgtg 8330851  T
Q  469 ct 470  Q
    ||    
T  8330852 ct 8330853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 369 - 465
Target Start/End: Complemental strand, 37772412 - 37772316
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||    
T  37772412 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcct 37772316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 4582684 - 4582781
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  4582684 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcct 4582781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 21384447 - 21384348
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| ||||    
T  21384447 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 21384348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 21387867 - 21387768
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| ||||    
T  21387867 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 21387768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 18861966 - 18862048
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18862048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 25367375 - 25367465
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  25367375 tcccaaagtttctcacttactagttgtgaactttctctataaatagagagttcacacagtgctttccatacaccgaaattcacaattgatg 25367465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 19393119 - 19393221
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||    || ||||||||||||||||||| ||||| |    
T  19393119 ttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgatgcttcctgt 19393218  T
Q  468 gct 470  Q
    |||    
T  19393219 gct 19393221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 21827335 - 21827417
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21827417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 22104381 - 22104279
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| |||||||   ||||||||||||||| |||||| ||||| |    
T  22104381 ttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgatgattcctgt 22104282  T
Q  468 gct 470  Q
    |||    
T  22104281 gct 22104279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 373 - 470
Target Start/End: Original strand, 34818099 - 34818196
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||| ||||    
T  34818099 aaagtttctcagttattagttgtgaactttctctataaatagagagttcacacagtgctttcggtacaccgaaattcacagttgatgcttcctgtgct 34818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 21411726 - 21411638
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  21411726 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatg 21411638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 21806218 - 21806130
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  21806218 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgatg 21806130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 370 - 465
Target Start/End: Original strand, 16066607 - 16066702
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||| |    |||||||||||||||||||||| |||||    
T  16066607 cccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatgcttcct 16066702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 23915195 - 23915096
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||| ||||||||| | || | || ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  23915195 ccaaagtttctcatttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 23915096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 14036161 - 14036083
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||||||| ||||| |  |||||||| ||||||||||||||||||||| | | |||||||||||||||||    
T  14036161 ttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcacaaaattcattccacacaccgaaa 14036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 25733590 - 25733650
Alignment:
Q  405 ctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  25733590 ctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcct 25733650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 31448747 - 31448797
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 31448797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 4237222 - 4237274
Alignment:
Q  322 agtgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  4237222 agtgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 4237274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 4241963 - 4242013
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  4241963 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattccca 4242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 17153244 - 17153198
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatag 414  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  17153244 ttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 414
Target Start/End: Original strand, 17157440 - 17157486
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatag 414  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  17157440 ttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 42972823 - 42972749
Alignment:
Q  367 attcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    |||||||||||||||||||| |||||    ||||||||||||||||||| |  ||||| ||||||||| ||||||    
T  42972823 attcccaaagtttctcactttttagtgggaaattttctctataaatagatatttcacatagtgcattctacacac 42972749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 14036654 - 14036609
Alignment:
Q  323 gtgttggaacatgtgtggaaatt--aagtaaaaagactaaacacaa 366  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  14036654 gtgttggaacatgtgtggaaattagaagttaaaagactaaacacaa 14036609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 15197331 - 15197266
Alignment:
Q  381 tcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||| |||||||| ||||||| | |||||||||||||| ||| | ||| |||||||| ||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagagagttcagatagttcattccacgcaccgaaa 15197266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 373 - 465
Target Start/End: Original strand, 9273 - 9365
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9273 aaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 8764 - 8814
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 8814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 10160109 - 10160205
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10160109 tcccaaagtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 10160205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 25375595 - 25375499
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 464  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  25375595 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattctacacactgaaattcacagttgatgattcc 25375499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 1284217 - 1284130
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1284217 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 369 - 468
Target Start/End: Complemental strand, 30658882 - 30658783
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||| ||||    
T  30658882 tcccaaagtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattccacatacacaaattcacagttgatgcttcatatg 30658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 371 - 468
Target Start/End: Complemental strand, 28855833 - 28855737
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  28855833 ccaaagtttctcatttattagttgtgaatttcc-ctataaatagagagctcacaaagtgcattcgacacaccgaaattcacagttgatgattcctatg 28855737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 34070125 - 34070029
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcc 464  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||| ||||    
T  34070125 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatgcttcc 34070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 23068144 - 23068243
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||| |||||||||| | || | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  23068144 ccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 23068243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 30344312 - 30344394
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 30344394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 22845108 - 22845017
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |  ||| | ||||||||||| ||||||    
T  22845108 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgcaatgtacagaacgaaattcacaattgatg 22845017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 26897333 - 26897231
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  26897333 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgatgcttcctgt 26897234  T
Q  468 gct 470  Q
    |||    
T  26897233 gct 26897231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 42248930 - 42248831
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| |||| |||||| ||||| ||||    
T  42248930 ccaaagtttctcacctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatgcttcctgtgct 42248831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 6856903 - 6856801
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||     |||||||||||||||||||| ||||| |    
T  6856903 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgatgcttcctgt 6856804  T
Q  468 gct 470  Q
    |||    
T  6856803 gct 6856801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 24292850 - 24292952
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| | |||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24292850 ttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgt 24292949  T
Q  468 gct 470  Q
    |||    
T  24292950 gct 24292952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 24286282 - 24286384
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||||| ||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24286282 ttcccaaagcttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgt 24286381  T
Q  468 gct 470  Q
    |||    
T  24286382 gct 24286384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 30635502 - 30635397
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaata--gagagctcacacagtgcattccacacaccg-aaattcacagttgatgtttcc 464  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||   |||||||||| ||||||||  |||||||| |||||||||||||||| ||||    
T  30635502 ttccccaagtttctcacttattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgcttcc 30635403  T
Q  465 tatgct 470  Q
    | ||||    
T  30635402 tgtgct 30635397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 373 - 465
Target Start/End: Original strand, 377683 - 377775
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||| | |||||| |||| ||| ||||||||||||||||||||| | |||||| |  |||||||||||||||||||||| |||||    
T  377683 aaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatgcttcct 377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 7559756 - 7559836
Alignment:
Q  385 ttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||   ||||  |||||||||||||||| |||||    
T  7559756 ttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacacttaaattcacagttgatgcttcct 7559836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 9785851 - 9785754
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | || ||||||||||||| ||||||  |||||||  |||||||||||||||||||||||| ||||| ||||    
T  9785851 ccaaagtttctcacttattagttgtaaactatccctataaatagagaactcaca--gtgcattttacacaccgaaattcacagttgatgcttcctgtgct 9785754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 6297282 - 6297371
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||| ||||||||||||| | || |||||||| |||||||||||||||||||| | ||| | |||| |||||||||||||||||    
T  6297282 tcccaaagtttatcacttattagttgtcaactttctcta-aaatagagagctcacacagttctttctatacacagaaattcacagttgatg 6297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 17327766 - 17327708
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacaca 426  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17327766 ttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctcacaca 17327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 17452974 - 17453053
Alignment:
Q  368 ttcccaaagtttctcacttattagttttg-----aattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||| || |     ||||||||||||||||||||| |||||| ||| |||||||||||||    
T  17452974 ttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 35602804 - 35602757
Alignment:
Q  324 tgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattc 370  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  35602804 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattc 35602757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 10159601 - 10159651
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  10159601 tgttggaacatctgtggaaattgagttaaaaagactaaacacaaattccca 10159651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 30659373 - 30659318
Alignment:
Q  319 ggaagtgttggaacatgtgtggaaattaag-taaaaagactaaacacaaattccca 373  Q
    |||| |||||||||||||||||||||| || ||||||||||||||| ||| |||||    
T  30659373 ggaattgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactccca 30659318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 30637177 - 30637112
Alignment:
Q  400 tttctctataaatag--agagctcacacagtgcattccacacaccg-aaattcacagttgatgttt 462  Q
    ||||||||||||||   |||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  30637177 tttctctataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgttt 30637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 30641499 - 30641577
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||| |||||||||||| ||||||||  || ||||||||||||||||  || | ||  ||| |||||||||||||||||    
T  30641499 ttccaaaagtttctcacatattagttgagatttttctctataaataggtagattacgtagttcattccacacaccgaaa 30641577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 369 - 459
Target Start/End: Complemental strand, 8076755 - 8076665
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8076755 tcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 8076665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 9650349 - 9650445
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  9650349 tcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcct 9650445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 27256942 - 27256841
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||| ||||| ||    
T  27256942 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 27256843  T
Q  469 ct 470  Q
    ||    
T  27256842 ct 27256841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 18426630 - 18426543
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18426630 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18426543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 40864752 - 40864853
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||| ||||| ||    
T  40864752 tcccaaagttactcacttattagttgtgaactttctctataaatagagagctcacacagtactttcgatacaccgaaattcacagttgatgcttcctgtg 40864851  T
Q  469 ct 470  Q
    ||    
T  40864852 ct 40864853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 20488651 - 20488563
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20488651 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 20488563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 459
Target Start/End: Original strand, 8954655 - 8954746
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  || ||||||||| |||||||||    
T  8954655 ttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgatg 8954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 16459772 - 16459871
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | || ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  16459772 ccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 16459871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 45169322 - 45169409
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  45169322 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgat 45169409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 373 - 459
Target Start/End: Complemental strand, 20485288 - 20485202
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20485288 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 20485202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 14928027 - 14928126
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  14928027 ccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 14928126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 15351493 - 15351592
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  15351493 ccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 15351592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 9008863 - 9008789
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||    
T  9008863 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacacc 9008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 14259709 - 14259610
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||   ||||||||||||||||| ||||| ||||    
T  14259709 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgatgcttcctgtgct 14259610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 29727211 - 29727294
Alignment:
Q  387 attagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||||||||||||| ||||    
T  29727211 attagttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgct 29727294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 845996 - 846098
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| ||||| |    
T  845996 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgt 846095  T
Q  468 gct 470  Q
    |||    
T  846096 gct 846098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 853373 - 853475
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| ||||| |    
T  853373 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgt 853472  T
Q  468 gct 470  Q
    |||    
T  853473 gct 853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 1211377 - 1211479
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||| ||||||| | || ||||||||||  ||||||| ||||| |    
T  1211377 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatgcttcctgt 1211476  T
Q  468 gct 470  Q
    |||    
T  1211477 gct 1211479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 838820 - 838917
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||   || ||||||||||| ||||||| |||||    
T  838820 ttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcct 838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 465
Target Start/End: Original strand, 1204000 - 1204097
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||   || ||||||||||| ||||||| |||||    
T  1204000 ttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatgcttcct 1204097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 32302542 - 32302443
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||| ||||||||||||||||| | || | |||||||||||| ||| || |||  |||||||| |||||||||||||||||||||||||||||| ||||    
T  32302542 ccaaaatttctcacttattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgatgtttcctgtgct 32302443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 47102203 - 47102148
Alignment:
Q  410 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47102203 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 47102148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 10532221 - 10532295
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||  |||||||||||||||||    
T  10532221 ttcccaaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacacc 10532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 459
Target Start/End: Complemental strand, 19641004 - 19640914
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||  || | ||| | ||||||||||||||||||||||    
T  19641004 tcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcacattgttctttcgatacaccgaaattcacagttgatg 19640914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 465
Target Start/End: Complemental strand, 36477674 - 36477586
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||       ||||||||||||||||||||||| |||||    
T  36477674 cccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgatgcttcct 36477586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 10499494 - 10499566
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||    |||||||||||||||||    
T  10499494 cccaaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10499566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 10504523 - 10504595
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||    |||||||||||||||||    
T  10504523 cccaaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 11017473 - 11017557
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttg 456  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| || | |||| ||||| |  ||||||||||||||||||    
T  11017473 caaagtttctcacttattagttgtgaattttctatataaatagagaggtcgcgcagtacattctatccaccgaaattcacagttg 11017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 372 - 459
Target Start/End: Complemental strand, 19096957 - 19096869
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccg-aaattcacagttgatg 459  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||| ||||||||||||||||    
T  19096957 caaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgatg 19096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 13343817 - 13343891
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| || ||||   | |||||||||||||||    
T  13343817 ttcccaaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacacc 13343891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 9649844 - 9649893
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9649844 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattccca 9649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 16580932 - 16580844
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||||||||||||||||| || | || | || | |||||||| || |||||||||||||||  ||||| ||||||||||||||||||    
T  16580932 ccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacacagtgcattgtacacaacgaaattcacagttgatg 16580844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 2629353 - 2629290
Alignment:
Q  377 tttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacaca 440  Q
    |||||||| |||||||| | ||||||||||||||||| |||||||||| ||| |||||||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattccacaca 2629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 47102742 - 47102692
Alignment:
Q  324 tgttggaacatgtgtggaaattaagt-aaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  47102742 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattccca 47102692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 1043922 - 1043847
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||| ||| | | |||||  ||||||||||    
T  1043922 ccaaagtttctcacatattaattgtgaattttctctataaataaagagctgacataattcattctgcacaccgaaa 1043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 446
Target Start/End: Complemental strand, 11297455 - 11297381
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  |||  ||||||||||||||||    
T  11297455 caaagtttctcacatattagttgtgatttttctctataaataggtagatcacgtagtttattccacacaccgaaa 11297381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 15566081 - 15566012
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacac 439  Q
    |||| |||||||||||| |||||||| ||| |||||| |||||||  |||||||| ||||| ||||||||||    
T  15566081 ttccaaaagtttctcacatattagttgtgagttttctatataaat--agagctcatacagttcattccacac 15566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 43457097 - 43457143
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 370  Q
    |||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  43457097 tgttggaacatgcgtgaaaattaagttaaaagaataaacacaaattc 43457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 10488686 - 10488759
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    |||||||||||||||   |||||||| ||| |||| | |||||||| |||||||| | ||| ||||||||||||    
T  10488686 ttcccaaagtttctcctatattagttgtgatttttttttataaatatagagctcatatagttcattccacacac 10488759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 10499011 - 10499056
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 369  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||    
T  10499011 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatt 10499056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 10504040 - 10504085
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 369  Q
    |||||||||||||||||||||| | | ||||||||||||| |||||    
T  10504040 tgttggaacatgtgtggaaattgaattaaaagactaaacataaatt 10504085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 13343311 - 13343356
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaatt 369  Q
    |||||||||||||||||||||| | | ||||||| |||||||||||    
T  13343311 tgttggaacatgtgtggaaattgaattaaaagacaaaacacaaatt 13343356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 23866924 - 23866884
Alignment:
Q  333 atgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    ||||||| ||||| ||| |||||||||||||||||||||||    
T  23866924 atgtgtgaaaattgagttaaaagactaaacacaaattccca 23866884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 30970 - 30871
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||||||    
T  30970 ccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatgcttcctatgct 30871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 121269 - 121170
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  121269 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctatgct 121170  T

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Target: scaffold0019 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 30390 - 30288
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||    
T  30390 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgatgcttcctat 30291  T
Q  468 gct 470  Q
    |||    
T  30290 gct 30288  T

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Target: scaffold0009 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 368 - 465
Target Start/End: Complemental strand, 71838 - 71740
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa-ttcacagttgatgtttcct 465  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  71838 ttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgatgcttcct 71740  T

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Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 15225871 - 15225769
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |    
T  15225871 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgatgcttcctgt 15225772  T
Q  468 gct 470  Q
    |||    
T  15225771 gct 15225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 7902500 - 7902601
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||| ||    
T  7902500 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacacacaccgaaattcacatttgatgcttcctgtg 7902599  T
Q  469 ct 470  Q
    ||    
T  7902600 ct 7902601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 13521374 - 13521470
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  13521374 tcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatgcttcct 13521470  T

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Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 375 - 459
Target Start/End: Complemental strand, 47575361 - 47575277
Alignment:
Q  375 agtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  47575361 agtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacaccgaaattcaaagttgatg 47575277  T

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Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 459
Target Start/End: Original strand, 31297884 - 31297974
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31297884 tcccaaagtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacaccgaaattcacaattgatg 31297974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 34561129 - 34561028
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||| ||||| ||    
T  34561129 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 34561030  T
Q  469 ct 470  Q
    ||    
T  34561029 ct 34561028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 3997451 - 3997547
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||| |||||    
T  3997451 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatattgctttacacacaccgaaattcacagttgatgcttcct 3997547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 12488501 - 12488414
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  12488501 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 14868456 - 14868558
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||| |    
T  14868456 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgt 14868555  T
Q  468 gct 470  Q
    |||    
T  14868556 gct 14868558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 14877478 - 14877376
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||| |    
T  14877478 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgt 14877379  T
Q  468 gct 470  Q
    |||    
T  14877378 gct 14877376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 10713643 - 10713544
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  10713643 ccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10713544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 10927413 - 10927314
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  10927413 ccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10927314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 459
Target Start/End: Original strand, 14899004 - 14899095
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||   || |||||||||||||||||||    
T  14899004 ttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14899095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 15011207 - 15011306
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||| ||||    
T  15011207 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgatgcttcctgtgct 15011306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 14953451 - 14953533
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 14953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 25690692 - 25690610
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 25690610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 8660791 - 8660893
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||  ||||||||||||  |||||||||||| |||||||||||||||||||||||| |  ||||||||| |||||||||||||| ||||| |    
T  8660791 ttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacacagtgcagtatacacaccgagattcacagttgatgcttcctgt 8660890  T
Q  468 gct 470  Q
    |||    
T  8660891 gct 8660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 9185072 - 9185174
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||   || |||||||||| |||||||| ||||| |    
T  9185072 ttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgatgattcctgt 9185171  T
Q  468 gct 470  Q
    |||    
T  9185172 gct 9185174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 9190937 - 9191039
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||    || |||||||||| |||||||| ||||| |    
T  9190937 ttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgatgattcctgt 9191036  T
Q  468 gct 470  Q
    |||    
T  9191037 gct 9191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 26034894 - 26034799
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 463  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || | ||||| |||||| ||||||||    
T  26034894 ttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccctgaaatacacagtcgatgtttc 26034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 401 - 459
Target Start/End: Complemental strand, 41817455 - 41817397
Alignment:
Q  401 ttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41817455 ttctctgtaaatagagagctcacacagtgcattctacacaccgaaattcacagttgatg 41817397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 39320267 - 39320173
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 463  Q
    |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||| | ||||| ||| ||||||||| |  |||||||||||    
T  39320267 ttcccaaa-tttctcacttattagttgtgaactttcactataaatagagagctcacacaattcattcgacaaaccgaaatttaacgttgatgtttc 39320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Original strand, 13520869 - 13520918
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattccca 373  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  13520869 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattccca 13520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 440
Target Start/End: Original strand, 52742616 - 52742684
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacaca 440  Q
    |||| |||||| | |||||||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  52742616 caaaatttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattccacaca 52742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 419 - 470
Target Start/End: Complemental strand, 18023276 - 18023225
Alignment:
Q  419 ctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||| ||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgct 18023225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 32545579 - 32545533
Alignment:
Q  378 ttctcacttattagttttgaattttctctataaatagagagctcaca 424  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctcaca 32545533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 26188056 - 26188129
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    |||| |||||||||||| |||||||| ||||||  || |||||||||||| |||||  ||||||||||| ||||    
T  26188056 ttcctaaagtttctcacatattagttgtgaattaactatataaatagagaactcacgtagtgcattccagacac 26188129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 55073847 - 55073774
Alignment:
Q  373 aaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||||||| ||  |||||||| ||||||||||||||||||||||| |||||  ||| ||||  |||||||||||    
T  55073847 aaagtttcacatatattagttgtgaattttctctataaatagagatctcacgtagttcattatacacaccgaaa 55073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 43477408 - 43477452
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaataga 415  Q
    ||||||||| |||||||||| || |||||||||||||||||||||    
T  43477408 ccaaagtttatcacttattaattgtgaattttctctataaataga 43477452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 39320768 - 39320722
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 370  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||||||    
T  39320768 tgttggaacatgtgtggaaattgagttaaaagattaaatacaaattc 39320722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 47362 - 47463
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  47362 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 47461  T
Q  469 ct 470  Q
    ||    
T  47462 ct 47463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 52306 - 52407
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||    
T  52306 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtg 52405  T
Q  469 ct 470  Q
    ||    
T  52406 ct 52407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 10367 - 10466
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  10367 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 10466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 7580 - 7481
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  7580 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 7481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 10817 - 10904
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  10817 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 31976 - 32063
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  31976 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 32063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 13403 - 13490
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  13403 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 13490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 21377 - 21464
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  21377 ccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 127106 - 127007
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  127106 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgct 127007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 24684 - 24786
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  24684 ttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgattcctgt 24783  T
Q  468 gct 470  Q
    |||    
T  24784 gct 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 35093 - 35194
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    |||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||| ||    
T  35093 tcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcacacagtgctttcgatacaccgaaattcacagttgatgcttcctgtg 35192  T
Q  469 ct 470  Q
    ||    
T  35193 ct 35194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 12359 - 12447
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12359 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 12447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 459
Target Start/End: Original strand, 14868 - 14956
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14868 ccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 14956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 457
Target Start/End: Original strand, 49373 - 49461
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttga 457  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  49373 tcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttga 49461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 465
Target Start/End: Original strand, 629 - 725
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  629 tcccaaagtttctcacttattagttatgaactttctctacatatagagagctcacacagtgctttcaatacaccgaaattcacagttgatgcttcct 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 457
Target Start/End: Complemental strand, 149261 - 149173
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttga 457  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  149261 tcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttga 149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 1186 - 1104
Alignment:
Q  376 gtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 19610 - 19712
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  19610 ttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgt 19709  T
Q  468 gct 470  Q
    |||    
T  19710 gct 19712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 81264 - 81162
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| ||||| |    
T  81264 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatgattcctgt 81165  T
Q  468 gct 470  Q
    |||    
T  81164 gct 81162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 459
Target Start/End: Complemental strand, 64866 - 64775
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||| ||| | | |||| |||||||||||||||||||    
T  64866 ttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 193655 - 193757
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||||| ||||| |    
T  193655 ttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgatgcttcctgt 193754  T
Q  468 gct 470  Q
    |||    
T  193755 gct 193757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 187972 - 188071
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||| ||| |||| |||| |||||||||||||| || | ||||||| |||||||   || ||||||| ||||||||||| ||||| ||||    
T  187972 ccaaagtttctcacctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatgcttcctgtgct 188071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 59131 - 59030
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatg 468  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| | |||||| ||||| ||    
T  59131 tcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacaccgaaattcataattgatgcttcctgtg 59032  T
Q  469 ct 470  Q
    ||    
T  59031 ct 59030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 63333 - 63284
Alignment:
Q  369 tcccaaagtttctcacttattagttttgaattttctctataaatagagag 418  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  63333 tcccaaagtttctcacttattagttgtgaactttctctataaatagagag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 370 - 465
Target Start/End: Complemental strand, 570 - 475
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   | |||||||||||||||||||| |||||    
T  570 cccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatgcttcct 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 35402 - 35489
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgat 458  Q
    ||||||||||||||||||||||| | ||   |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  35402 ccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 35489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 470
Target Start/End: Original strand, 5273 - 5371
Alignment:
Q  372 caaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgct 470  Q
    |||||||||||||||||||||| | || | || ||||||||||||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||    
T  5273 caaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcatcctacacaccgaaattcacagttgatgcttcctgtgct 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 3735 - 3837
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctat 467  Q
    |||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||   || ||||||||||||||||||| ||||| |    
T  3735 ttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatgcttcctgt 3834  T
Q  468 gct 470  Q
    |||    
T  3835 gct 3837  T

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Target: scaffold0018 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 371 - 465
Target Start/End: Complemental strand, 22010 - 21916
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||||||||| |||| | || | |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||    
T  22010 ccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattctacacactgaaattcacagttgatgcttcct 21916  T

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Target: scaffold0628 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 7091 - 7003
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 459  Q
    ||||||||||| ||||||||||| | || | |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  7091 ccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcatagttgatg 7003  T

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Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 5877 - 5831
Alignment:
Q  324 tgttggaacatgtgtggaaattaagtaaaaagactaaacacaaattc 370  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5877 tgttggaacatgtgtggaaattgagttaaaatactaaacacaaattc 5831  T

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Target: scaffold0292 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 465
Target Start/End: Complemental strand, 7870 - 7776
Alignment:
Q  371 ccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    |||||||||||| |||||||||| | || | |||||||||||||||| |||||||||||||||| |||||| |||||||||| || ||| |||||    
T  7870 ccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcct 7776  T

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Target: scaffold0008 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 256518 - 256444
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacacc 442  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||  ||||| |||||||| ||||||||    
T  256518 ttcccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacacc 256444  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 257838 - 257801
Alignment:
Q  333 atgtgtggaaattaagtaaaaagactaaacacaaattc 370  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  257838 atgtgtggaaattgagttaaaagactaaacacaaattc 257801  T

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Target: scaffold0004 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 470
Target Start/End: Complemental strand, 199894 - 199796
Alignment:
Q  370 cccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcctatgc 469  Q
    ||||| ||||||||| ||||||||  ||| ||||||||||||||||||||||||||| |||||||     |||||||||||||||||||| ||||| |||    
T  199894 cccaatgtttctcacctattagttgcgaagtttctctataaatagagagctcacacaatgcattc--tggaccgaaattcacagttgatgattcctgtgc 199797  T

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Target: scaffold0932 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 1027 - 1105
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  ||| |||||||||||||||||    
T  1027 ttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacaccgaaa 1105  T

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Target: scaffold0478 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 8293 - 8215
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||  || ||||  ||| |||||||||||||||||    
T  8293 ttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacctagttcattccacacaccgaaa 8215  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 463
Target Start/End: Complemental strand, 22372 - 22320
Alignment:
Q  411 atagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttc 463  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgatttttc 22320  T

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Target: scaffold0720 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 5939 - 6017
Alignment:
Q  368 ttcccaaagtttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaa 446  Q
    |||| |||||||||||| |||||||| ||  ||||||||||||||||  || | ||  ||| |||||||||||||||||    
T  5939 ttccgaaagtttctcacatattagttgtgctttttctctataaataggtagattacgtagttcattccacacaccgaaa 6017  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 84120 - 84074
Alignment:
Q  324 tgttggaacatgtgtggaaatt-aagtaaaaagactaaacacaaatt 369  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||    
T  84120 tgttggaacatgtgtggaaattggattaaaaagactaaacacaaatt 84074  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 22644 - 22583
Alignment:
Q  380 ctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 441  Q
    |||||||||||||| | || | || ||||||||||||| ||| |||||||||||| ||||||    
T  22644 ctcacttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacac 22583  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 465
Target Start/End: Complemental strand, 22337 - 22284
Alignment:
Q  412 tagagagctcacacagtgcattccacacaccgaaattcacagttgatgtttcct 465  Q
    ||||||||||||||| |||||||   || ||||||||||||||||||| |||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcct 22284  T

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