View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4719-Insertion-12 (Length: 443)

Name: NF4719-Insertion-12
Description: NF4719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4719-Insertion-12
NF4719-Insertion-12
[»] chr7 (61 HSPs)
chr7 (33-212)||(37517710-37517891)
chr7 (28-212)||(43737621-43737807)
chr7 (32-208)||(9152321-9152497)
chr7 (88-212)||(19225102-19225226)
chr7 (88-212)||(36629736-36629860)
chr7 (46-212)||(19818909-19819075)
chr7 (90-212)||(42925144-42925266)
chr7 (78-212)||(24041684-24041818)
chr7 (114-212)||(36468079-36468177)
chr7 (95-212)||(47203017-47203134)
chr7 (32-212)||(3936517-3936697)
chr7 (32-212)||(42864548-42864728)
chr7 (95-212)||(8155428-8155545)
chr7 (95-212)||(31643577-31643694)
chr7 (68-212)||(36408886-36409029)
chr7 (349-432)||(42925414-42925497)
chr7 (352-432)||(9152093-9152173)
chr7 (352-432)||(37518040-37518120)
chr7 (98-212)||(18951380-18951494)
chr7 (349-427)||(19225372-19225450)
chr7 (327-425)||(36468291-36468389)
chr7 (99-212)||(3304261-3304374)
chr7 (78-206)||(24689829-24689958)
chr7 (349-432)||(47202789-47202872)
chr7 (349-427)||(31985291-31985369)
chr7 (118-202)||(6467837-6467921)
chr7 (349-432)||(43737384-43737467)
chr7 (352-425)||(7115046-7115119)
chr7 (349-432)||(19818682-19818764)
chr7 (349-412)||(24041971-24042034)
chr7 (349-432)||(31643342-31643425)
chr7 (349-416)||(33573822-33573889)
chr7 (362-425)||(43186094-43186157)
chr7 (351-422)||(48705775-48705846)
chr7 (353-427)||(8155206-8155280)
chr7 (142-212)||(26554721-26554791)
chr7 (358-423)||(8214377-8214442)
chr7 (352-425)||(16278322-16278395)
chr7 (349-398)||(26554937-26554986)
chr7 (352-432)||(42864878-42864959)
chr7 (352-432)||(3304528-3304608)
chr7 (352-432)||(36629505-36629585)
chr7 (359-425)||(5731063-5731128)
chr7 (349-398)||(28230266-28230315)
chr7 (352-398)||(6466914-6466960)
chr7 (115-212)||(31985072-31985170)
chr7 (353-418)||(30861399-30861464)
chr7 (98-212)||(33573566-33573676)
chr7 (349-425)||(32701034-32701110)
chr7 (352-398)||(1519050-1519096)
chr7 (151-212)||(28230054-28230115)
chr7 (155-212)||(30861603-30861660)
chr7 (327-395)||(36408702-36408776)
chr7 (349-418)||(47239492-47239561)
chr7 (352-383)||(37217509-37217540)
chr7 (327-357)||(1519109-1519139)
chr7 (327-357)||(36629600-36629630)
chr7 (327-357)||(43737476-43737506)
chr7 (327-356)||(19818774-19818803)
chr7 (361-413)||(24690122-24690174)
chr7 (329-357)||(42864835-42864863)
[»] chr1 (70 HSPs)
chr1 (26-212)||(32817247-32817435)
chr1 (65-212)||(44572589-44572736)
chr1 (27-212)||(34162230-34162417)
chr1 (32-208)||(45046309-45046485)
chr1 (65-208)||(40907411-40907554)
chr1 (65-212)||(49677977-49678124)
chr1 (88-212)||(17000843-17000967)
chr1 (32-212)||(40650152-40650333)
chr1 (65-212)||(45567384-45567530)
chr1 (78-212)||(41584093-41584227)
chr1 (32-195)||(42546479-42546643)
chr1 (335-432)||(45046610-45046707)
chr1 (115-212)||(52744387-52744484)
chr1 (65-212)||(38885747-38885892)
chr1 (65-168)||(7011789-7011892)
chr1 (98-212)||(23443263-23443377)
chr1 (78-212)||(34006797-34006931)
chr1 (98-212)||(44937804-44937918)
chr1 (95-212)||(32542744-32542861)
chr1 (327-414)||(49677783-49677870)
chr1 (100-212)||(667190-667303)
chr1 (32-212)||(4615413-4615595)
chr1 (327-417)||(41584332-41584423)
chr1 (349-432)||(42546270-42546352)
chr1 (54-212)||(15069380-15069541)
chr1 (117-211)||(33610935-33611029)
chr1 (349-426)||(28866404-28866481)
chr1 (95-212)||(49786812-49786929)
chr1 (349-425)||(18583318-18583394)
chr1 (88-212)||(6223255-6223381)
chr1 (349-398)||(40650478-40650527)
chr1 (353-425)||(9445967-9446038)
chr1 (349-417)||(27795147-27795215)
chr1 (352-432)||(41584442-41584522)
chr1 (352-427)||(6223530-6223604)
chr1 (129-212)||(18583090-18583173)
chr1 (352-427)||(40907711-40907786)
chr1 (349-432)||(49786570-49786653)
chr1 (349-432)||(52744617-52744700)
chr1 (349-415)||(38885532-38885598)
chr1 (352-425)||(24472605-24472678)
chr1 (98-212)||(24472342-24472457)
chr1 (359-425)||(800677-800742)
chr1 (327-385)||(34162532-34162590)
chr1 (108-161)||(28866175-28866228)
chr1 (352-427)||(34006568-34006642)
chr1 (352-414)||(33611187-33611249)
chr1 (335-384)||(17000670-17000719)
chr1 (349-424)||(23443048-23443123)
chr1 (349-407)||(42929208-42929266)
chr1 (352-417)||(8704295-8704360)
chr1 (135-212)||(9445714-9445791)
chr1 (352-425)||(43319062-43319134)
chr1 (172-208)||(27795346-27795382)
chr1 (360-432)||(44572885-44572957)
chr1 (349-396)||(3561109-3561156)
chr1 (355-398)||(38131221-38131264)
chr1 (352-407)||(44037191-44037246)
chr1 (352-398)||(6099718-6099764)
chr1 (352-398)||(6099898-6099944)
chr1 (363-417)||(27400069-27400123)
chr1 (327-357)||(38885603-38885633)
chr1 (327-357)||(42546362-42546392)
chr1 (327-357)||(45567643-45567673)
chr1 (327-356)||(3561067-3561096)
chr1 (349-390)||(44938073-44938114)
chr1 (327-356)||(52744574-52744603)
chr1 (354-398)||(11384305-11384349)
chr1 (329-357)||(24472562-24472590)
chr1 (329-357)||(40907669-40907697)
[»] chr2 (56 HSPs)
chr2 (65-212)||(4268096-4268243)
chr2 (65-212)||(41509908-41510055)
chr2 (32-212)||(44465194-44465376)
chr2 (29-212)||(32187321-32187506)
chr2 (27-192)||(16749883-16750050)
chr2 (32-212)||(17474236-17474417)
chr2 (65-212)||(33451937-33452084)
chr2 (65-209)||(45153380-45153524)
chr2 (327-432)||(33452189-33452294)
chr2 (31-212)||(8450827-8451010)
chr2 (65-212)||(38308319-38308467)
chr2 (68-207)||(25217254-25217393)
chr2 (108-212)||(36948644-36948748)
chr2 (85-201)||(39447690-39447806)
chr2 (352-432)||(42894679-42894759)
chr2 (349-432)||(25217543-25217626)
chr2 (40-212)||(41854348-41854517)
chr2 (349-432)||(44465509-44465592)
chr2 (135-212)||(42894909-42894986)
chr2 (352-432)||(17474570-17474650)
chr2 (78-160)||(15994636-15994718)
chr2 (327-427)||(38308572-38308679)
chr2 (349-427)||(27670803-27670881)
chr2 (349-427)||(34517410-34517488)
chr2 (349-427)||(41854672-41854750)
chr2 (135-212)||(38065123-38065200)
chr2 (349-425)||(17133034-17133110)
chr2 (349-417)||(39447474-39447542)
chr2 (327-422)||(11457264-11457358)
chr2 (352-403)||(16750216-16750267)
chr2 (351-417)||(15994890-15994956)
chr2 (353-427)||(38065350-38065424)
chr2 (349-427)||(41202958-41203036)
chr2 (349-397)||(5507757-5507805)
chr2 (352-407)||(32187656-32187711)
chr2 (356-417)||(30763967-30764028)
chr2 (334-387)||(41204267-41204320)
chr2 (352-432)||(41510201-41510281)
chr2 (359-425)||(25715770-25715835)
chr2 (352-414)||(33440282-33440344)
chr2 (88-212)||(34517643-34517766)
chr2 (327-372)||(19109768-19109813)
chr2 (155-212)||(27671034-27671091)
chr2 (349-425)||(9847075-9847150)
chr2 (353-397)||(35251269-35251313)
chr2 (327-396)||(8388980-8389056)
chr2 (352-398)||(36948805-36948851)
chr2 (101-201)||(8389180-8389281)
chr2 (349-398)||(42604795-42604844)
chr2 (327-357)||(5507814-5507844)
chr2 (354-404)||(27900387-27900437)
chr2 (327-357)||(34517500-34517530)
chr2 (327-357)||(42894772-42894802)
chr2 (352-425)||(9847286-9847358)
chr2 (349-425)||(12885271-12885347)
chr2 (353-425)||(45293938-45294010)
[»] chr8 (53 HSPs)
chr8 (32-212)||(42280346-42280528)
chr8 (25-212)||(40995190-40995379)
chr8 (32-212)||(9074061-9074243)
chr8 (68-212)||(8884935-8885079)
chr8 (32-212)||(11697764-11697946)
chr8 (65-212)||(44106747-44106894)
chr8 (26-212)||(27927391-27927579)
chr8 (27-212)||(28917311-28917498)
chr8 (31-212)||(14163492-14163677)
chr8 (32-212)||(11698602-11698784)
chr8 (32-201)||(34853861-34854030)
chr8 (107-212)||(3095221-3095326)
chr8 (64-212)||(21594312-21594461)
chr8 (32-201)||(34854245-34854414)
chr8 (120-212)||(21004849-21004941)
chr8 (349-432)||(8885226-8885309)
chr8 (352-424)||(42280668-42280740)
chr8 (95-212)||(31519398-31519515)
chr8 (352-432)||(11698093-11698173)
chr8 (353-425)||(7981825-7981897)
chr8 (98-209)||(17119384-17119496)
chr8 (350-424)||(40994980-40995054)
chr8 (351-432)||(28917077-28917158)
chr8 (353-425)||(36980878-36980950)
chr8 (350-432)||(3094987-3095069)
chr8 (327-432)||(34853630-34853742)
chr8 (349-432)||(31519668-31519749)
chr8 (334-398)||(32504095-32504159)
chr8 (352-425)||(31234598-31234672)
chr8 (353-425)||(33472286-33472358)
chr8 (352-407)||(4259459-4259514)
chr8 (349-427)||(10840527-10840605)
chr8 (352-425)||(10833386-10833458)
chr8 (352-425)||(24627789-24627861)
chr8 (352-425)||(24627998-24628070)
chr8 (349-425)||(36318105-36318181)
chr8 (352-407)||(27927727-27927782)
chr8 (135-212)||(4259236-4259314)
chr8 (352-398)||(9073855-9073901)
chr8 (349-407)||(14163831-14163889)
chr8 (130-212)||(36407249-36407331)
chr8 (352-417)||(6395401-6395466)
chr8 (155-212)||(10840314-10840371)
chr8 (349-386)||(11698445-11698482)
chr8 (350-391)||(17119655-17119696)
chr8 (350-407)||(40328225-40328281)
chr8 (349-413)||(27234597-27234661)
chr8 (349-392)||(28219004-28219047)
chr8 (327-358)||(44106611-44106642)
chr8 (174-212)||(40328437-40328475)
chr8 (352-425)||(41530891-41530963)
chr8 (328-356)||(3095085-3095113)
chr8 (329-357)||(36980963-36980991)
[»] chr3 (80 HSPs)
chr3 (32-212)||(47739383-47739565)
chr3 (32-212)||(33439706-33439890)
chr3 (32-212)||(46622249-46622429)
chr3 (8-212)||(39150312-39150514)
chr3 (65-201)||(3351542-3351678)
chr3 (32-208)||(3902254-3902432)
chr3 (33-212)||(35142610-35142789)
chr3 (32-212)||(50716781-50716963)
chr3 (32-212)||(50795884-50796066)
chr3 (32-212)||(49095657-49095838)
chr3 (95-212)||(2358125-2358242)
chr3 (80-212)||(38977244-38977374)
chr3 (88-212)||(41301434-41301558)
chr3 (98-212)||(500693-500807)
chr3 (108-212)||(26053262-26053366)
chr3 (65-212)||(47130871-47131018)
chr3 (78-168)||(52777792-52777882)
chr3 (327-390)||(39150146-39150209)
chr3 (95-201)||(3938728-3938834)
chr3 (327-409)||(46622547-46622629)
chr3 (95-212)||(8657655-8657772)
chr3 (327-432)||(3902551-3902663)
chr3 (65-165)||(54588226-54588326)
chr3 (349-432)||(34821117-34821200)
chr3 (349-432)||(35142375-35142458)
chr3 (117-212)||(47302534-47302629)
chr3 (349-427)||(28873313-28873391)
chr3 (108-212)||(41485818-41485921)
chr3 (349-427)||(47302326-47302404)
chr3 (353-427)||(51258711-51258785)
chr3 (349-432)||(2358396-2358479)
chr3 (351-432)||(3938484-3938565)
chr3 (353-425)||(29048639-29048711)
chr3 (352-423)||(500963-501034)
chr3 (349-432)||(4394281-4394364)
chr3 (327-417)||(51816531-51816621)
chr3 (352-425)||(45244606-45244678)
chr3 (349-417)||(14828690-14828758)
chr3 (349-417)||(35345683-35345751)
chr3 (352-432)||(51540404-51540484)
chr3 (361-432)||(3351852-3351923)
chr3 (352-427)||(33439494-33439569)
chr3 (349-432)||(50716555-50716638)
chr3 (349-432)||(50796209-50796292)
chr3 (332-390)||(21481395-21481453)
chr3 (359-417)||(43471466-43471524)
chr3 (352-396)||(30721611-30721655)
chr3 (349-417)||(34009868-34009936)
chr3 (156-212)||(51540200-51540256)
chr3 (369-432)||(43472762-43472825)
chr3 (349-426)||(38977521-38977599)
chr3 (349-407)||(41300937-41300995)
chr3 (353-398)||(49095995-49096040)
chr3 (327-398)||(47739679-47739756)
chr3 (67-121)||(4394555-4394609)
chr3 (352-398)||(29036140-29036186)
chr3 (115-212)||(51493330-51493428)
chr3 (135-212)||(28873537-28873614)
chr3 (351-388)||(43419905-43419942)
chr3 (349-390)||(47123328-47123369)
chr3 (349-390)||(47130694-47130735)
chr3 (352-424)||(4300054-4300125)
chr3 (353-397)||(11266573-11266617)
chr3 (349-393)||(47769603-47769647)
chr3 (349-392)||(41486058-41486101)
chr3 (327-357)||(3351795-3351825)
chr3 (327-357)||(8657511-8657541)
chr3 (352-418)||(19419734-19419800)
chr3 (327-357)||(35142467-35142497)
chr3 (327-357)||(47123378-47123408)
chr3 (327-357)||(47130744-47130774)
chr3 (327-357)||(49095952-49095982)
chr3 (327-357)||(50716647-50716677)
chr3 (327-357)||(50796170-50796200)
chr3 (327-357)||(51258799-51258829)
chr3 (328-357)||(35345645-35345674)
chr3 (376-425)||(45711886-45711935)
chr3 (349-425)||(8735402-8735476)
chr3 (349-425)||(9087643-9087717)
chr3 (156-212)||(14828491-14828547)
[»] chr6 (48 HSPs)
chr6 (32-212)||(7423440-7423622)
chr6 (32-212)||(2539983-2540167)
chr6 (86-208)||(17264955-17265077)
chr6 (78-208)||(4507798-4507926)
chr6 (32-212)||(7416315-7416497)
chr6 (335-424)||(21514791-21514880)
chr6 (88-212)||(13096696-13096820)
chr6 (78-190)||(2812732-2812844)
chr6 (88-212)||(3716797-3716921)
chr6 (98-212)||(5639633-5639746)
chr6 (75-212)||(9905593-9905731)
chr6 (27-212)||(14587001-14587187)
chr6 (117-212)||(32044752-32044847)
chr6 (88-212)||(5700135-5700259)
chr6 (65-212)||(1945057-1945202)
chr6 (349-422)||(237110-237183)
chr6 (327-392)||(29630716-29630781)
chr6 (349-432)||(2812996-2813079)
chr6 (349-432)||(4508076-4508159)
chr6 (349-432)||(5639163-5639246)
chr6 (346-432)||(17264711-17264797)
chr6 (349-432)||(2539753-2539836)
chr6 (349-432)||(3717056-3717139)
chr6 (349-407)||(5699925-5699983)
chr6 (349-407)||(9905390-9905448)
chr6 (349-425)||(14587335-14587411)
chr6 (98-212)||(4655371-4655486)
chr6 (352-427)||(24604138-24604213)
chr6 (149-212)||(33413200-33413263)
chr6 (349-395)||(7416125-7416171)
chr6 (352-407)||(1945359-1945414)
chr6 (352-399)||(16450553-16450600)
chr6 (349-395)||(7413106-7413152)
chr6 (142-212)||(23407276-23407346)
chr6 (130-212)||(24603910-24603991)
chr6 (115-212)||(29519813-29519911)
chr6 (349-393)||(7423240-7423284)
chr6 (351-417)||(3365976-3366042)
chr6 (349-398)||(29519611-29519661)
chr6 (352-384)||(29289469-29289501)
chr6 (327-357)||(2539845-2539875)
chr6 (352-394)||(8120153-8120195)
chr6 (327-357)||(17264808-17264838)
chr6 (142-212)||(29289257-29289327)
chr6 (327-357)||(29289430-29289460)
chr6 (155-212)||(13799107-13799164)
chr6 (352-425)||(17501297-17501369)
chr6 (156-212)||(14037542-14037598)
[»] chr5 (71 HSPs)
chr5 (32-212)||(31928571-31928753)
chr5 (32-212)||(38692239-38692421)
chr5 (25-212)||(37183226-37183415)
chr5 (31-212)||(38872151-38872334)
chr5 (27-212)||(40619428-40619612)
chr5 (32-212)||(31220783-31220966)
chr5 (88-212)||(33488104-33488228)
chr5 (32-212)||(15799726-15799908)
chr5 (78-212)||(4064289-4064423)
chr5 (78-212)||(20892106-20892240)
chr5 (88-212)||(29863053-29863177)
chr5 (65-208)||(32841454-32841598)
chr5 (88-212)||(38372800-38372924)
chr5 (78-168)||(6157901-6157991)
chr5 (68-212)||(39525250-39525393)
chr5 (327-432)||(39525040-39525145)
chr5 (65-165)||(14112257-14112357)
chr5 (83-168)||(6157676-6157761)
chr5 (99-212)||(12464620-12464733)
chr5 (31-212)||(24203167-24203348)
chr5 (350-432)||(14112129-14112211)
chr5 (327-432)||(37183528-37183638)
chr5 (352-432)||(6156995-6157075)
chr5 (31-207)||(15958252-15958431)
chr5 (117-212)||(26189849-26189944)
chr5 (349-432)||(26898577-26898660)
chr5 (349-432)||(31928899-31928982)
chr5 (352-427)||(32841748-32841823)
chr5 (135-212)||(26898347-26898424)
chr5 (129-212)||(7884694-7884777)
chr5 (350-432)||(38692557-38692640)
chr5 (349-427)||(26190096-26190174)
chr5 (349-426)||(31221114-31221190)
chr5 (336-425)||(41253577-41253666)
chr5 (349-425)||(11185961-11186037)
chr5 (352-427)||(33487880-33487955)
chr5 (349-395)||(27158385-27158431)
chr5 (353-427)||(27212972-27213046)
chr5 (352-425)||(5456327-5456400)
chr5 (352-416)||(40619762-40619826)
chr5 (349-432)||(7884458-7884541)
chr5 (353-424)||(26093731-26093802)
chr5 (349-427)||(20891881-20891959)
chr5 (327-384)||(4064530-4064587)
chr5 (352-425)||(16429250-16429323)
chr5 (352-425)||(21070636-21070709)
chr5 (360-425)||(28445284-28445348)
chr5 (352-432)||(38372565-38372645)
chr5 (349-432)||(12464892-12464975)
chr5 (352-398)||(15799523-15799569)
chr5 (352-398)||(18515104-18515150)
chr5 (359-417)||(33331420-33331478)
chr5 (95-168)||(38030770-38030843)
chr5 (352-424)||(15958021-15958093)
chr5 (353-420)||(26622394-26622461)
chr5 (360-398)||(6800725-6800763)
chr5 (359-425)||(43387944-43388009)
chr5 (135-212)||(6800498-6800575)
chr5 (372-425)||(8739079-8739132)
chr5 (349-390)||(38640938-38640979)
chr5 (353-393)||(5247276-5247316)
chr5 (356-392)||(28083157-28083193)
chr5 (352-407)||(19027338-19027393)
chr5 (349-395)||(5535204-5535250)
chr5 (327-357)||(20891970-20892000)
chr5 (349-399)||(26095367-26095417)
chr5 (352-398)||(28624357-28624403)
chr5 (327-357)||(33487968-33487998)
chr5 (359-401)||(34530208-34530249)
chr5 (360-398)||(42289754-42289792)
chr5 (350-382)||(12847717-12847749)
[»] chr4 (86 HSPs)
chr4 (33-212)||(25490830-25491011)
chr4 (65-207)||(47874262-47874404)
chr4 (32-201)||(54630937-54631108)
chr4 (32-212)||(25751895-25752076)
chr4 (32-212)||(7932143-7932325)
chr4 (32-212)||(46439730-46439912)
chr4 (78-212)||(8106920-8107054)
chr4 (47-212)||(48318545-48318711)
chr4 (78-212)||(55052181-55052315)
chr4 (88-212)||(17932643-17932766)
chr4 (32-212)||(53893465-53893647)
chr4 (327-432)||(48318816-48318921)
chr4 (66-212)||(2505511-2505657)
chr4 (78-212)||(38536719-38536853)
chr4 (88-212)||(40704471-40704595)
chr4 (95-212)||(6228327-6228444)
chr4 (327-432)||(38417101-38417205)
chr4 (117-212)||(41412748-41412843)
chr4 (108-202)||(32442363-32442457)
chr4 (95-212)||(27631879-27631996)
chr4 (352-432)||(25752220-25752300)
chr4 (108-212)||(34973399-34973503)
chr4 (93-168)||(31581958-31582033)
chr4 (352-432)||(7931966-7932046)
chr4 (99-212)||(27741667-27741780)
chr4 (328-427)||(8106709-8106808)
chr4 (352-427)||(19835835-19835910)
chr4 (352-427)||(25538755-25538830)
chr4 (78-181)||(29823154-29823256)
chr4 (349-424)||(38536489-38536564)
chr4 (350-432)||(46440047-46440129)
chr4 (354-427)||(6228592-6228665)
chr4 (349-432)||(18050963-18051046)
chr4 (349-432)||(25491169-25491252)
chr4 (349-432)||(29822890-29822973)
chr4 (349-432)||(34973174-34973257)
chr4 (349-420)||(37222286-37222357)
chr4 (349-432)||(40703974-40704057)
chr4 (349-424)||(53893800-53893875)
chr4 (349-432)||(54631266-54631349)
chr4 (349-415)||(14473989-14474055)
chr4 (361-427)||(49001341-49001407)
chr4 (135-212)||(3702808-3702885)
chr4 (352-432)||(17932914-17932994)
chr4 (65-212)||(49001038-49001186)
chr4 (352-395)||(31582207-31582250)
chr4 (349-427)||(3703029-3703107)
chr4 (349-395)||(20083317-20083363)
chr4 (88-145)||(19836011-19836068)
chr4 (349-398)||(32601182-32601231)
chr4 (349-418)||(48629340-48629409)
chr4 (327-384)||(55052429-55052486)
chr4 (368-424)||(52089572-52089628)
chr4 (346-432)||(2505801-2505888)
chr4 (95-212)||(23524327-23524440)
chr4 (349-407)||(6003447-6003505)
chr4 (352-425)||(4936499-4936572)
chr4 (349-398)||(5803202-5803251)
chr4 (352-425)||(42497712-42497785)
chr4 (100-212)||(38417298-38417410)
chr4 (349-432)||(23524097-23524180)
chr4 (352-395)||(47072334-47072377)
chr4 (349-392)||(49397361-49397404)
chr4 (67-121)||(18050719-18050773)
chr4 (361-423)||(27741899-27741961)
chr4 (352-417)||(41322870-41322934)
chr4 (352-397)||(47784338-47784383)
chr4 (352-417)||(48095639-48095704)
chr4 (147-195)||(42340188-42340236)
chr4 (352-407)||(5043641-5043696)
chr4 (352-407)||(39118482-39118537)
chr4 (100-212)||(41322615-41322729)
chr4 (327-357)||(3702984-3703014)
chr4 (327-357)||(17932872-17932902)
chr4 (327-357)||(29822982-29823012)
chr4 (327-357)||(31582172-31582202)
chr4 (363-397)||(47456950-47456984)
chr4 (327-357)||(47874119-47874149)
chr4 (327-357)||(54631225-54631255)
chr4 (356-425)||(372238-372307)
chr4 (352-425)||(25140586-25140658)
chr4 (329-357)||(13509463-13509491)
chr4 (327-391)||(20517561-20517624)
chr4 (329-357)||(25491128-25491156)
chr4 (96-124)||(47224535-47224563)
chr4 (363-407)||(53836072-53836116)
[»] scaffold0018 (2 HSPs)
scaffold0018 (38-212)||(173813-173989)
scaffold0018 (350-432)||(174136-174218)
[»] scaffold0508 (2 HSPs)
scaffold0508 (78-212)||(2880-3014)
scaffold0508 (352-432)||(3170-3250)
[»] scaffold0770 (3 HSPs)
scaffold0770 (32-212)||(4319-4501)
scaffold0770 (352-397)||(4122-4167)
scaffold0770 (327-356)||(4185-4214)
[»] scaffold0029 (3 HSPs)
scaffold0029 (32-212)||(102623-102805)
scaffold0029 (352-397)||(102426-102471)
scaffold0029 (327-356)||(102489-102518)
[»] scaffold0027 (3 HSPs)
scaffold0027 (32-212)||(141442-141624)
scaffold0027 (352-398)||(141771-141817)
scaffold0027 (327-355)||(141727-141755)
[»] scaffold0137 (2 HSPs)
scaffold0137 (78-208)||(8996-9126)
scaffold0137 (355-426)||(9278-9348)
[»] scaffold0010 (2 HSPs)
scaffold0010 (65-194)||(141021-141150)
scaffold0010 (360-432)||(140788-140860)
[»] scaffold0182 (1 HSPs)
scaffold0182 (349-407)||(23300-23358)
[»] scaffold0564 (2 HSPs)
scaffold0564 (360-414)||(4691-4745)
scaffold0564 (327-357)||(4774-4804)
[»] scaffold0016 (2 HSPs)
scaffold0016 (352-418)||(205887-205952)
scaffold0016 (348-425)||(205672-205748)
[»] scaffold0003 (1 HSPs)
scaffold0003 (156-212)||(421029-421085)


Alignment Details
Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 37517710 - 37517891
Alignment:
Q  33 ttacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatt 130  Q
    |||||||| ||||||||| | ||| ||||| ||  ||||||| || ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  37517710 ttactttttccatcctatagccttttcccgcgccctgtaaaatttctaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactatt 37517809  T
Q  131 tcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  37517810 tcggattttataatctggacaattcttatgtataatcagcaatcagactctctcacatttcagcagttttgagttttgcttt 37517891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 43737807 - 43737621
Alignment:
Q  28 gacaattacttttcccatcctatggtcttctc--ccgtgctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttta 125  Q
    ||||||||||||||||| ||||||  ||||||   ||  |||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  43737807 gacaattacttttcccaccctatgaccttctcatgcgccctgtaaaatttccaaaaatgcctttgtgcattccggattttaaaatccagattcatgttta 43737708  T
Q  126 ctatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||  ||||||||||| ||||||||||||||||||||||   || |||||||||||||||||| || ||||||||||||||||    
T  43737707 ctatttcatattttataatccggacaattcttatgtataatcagccattagactctctcacatttcaacagttttgagttttgcttt 43737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 9152497 - 9152321
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| ||| ||||||  ||||||||| ||  ||||||| ||| |||| |||| |||||||||||||||||||||||||  |||||||||||||||    
T  9152497 attactttttccaccctatgaccttctcccgcgcgctgtaaaattttcaaaaatgcccttgtgcattccggattttaaaatccgaattcatgtttactat 9152398  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttg 208  Q
    |||| ||||||||||| ||||||||||||||||||||||   |||||||  ||||||||||||||| |||| |||||||    
T  9152397 ttcggattttataatccggacaattcttatgtataatcagccatcagac--tctcacatttcagcagttttaagttttg 9152321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 19225102 - 19225226
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  19225102 ttgtgtattccggattttaaaatccggatttatgtttactatttcggattttataatctggacaattcttatgtataatcagccatcagactctcccaca 19225201  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    |||||||| |||||| |||||||||    
T  19225202 tttcagcagttttgaattttgcttt 19225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 36629860 - 36629736
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||   |||||||| |||||||    
T  36629860 ttgtacattctggattttaaaatccggattcatgtttactatttcggattttataatatggacaattcttatgtataatcagtcatcagactttctcaca 36629761  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    |||||||| ||||||||||||||||    
T  36629760 tttcagcagttttgagttttgcttt 36629736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 19819075 - 19818909
Alignment:
Q  46 cctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataa 143  Q
    ||||||| ||||||||| ||  ||||||| ||| |||| || | |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  19819075 cctatggccttctcccgcgccctgtaaaattttcaaaaatgtccttgtgcattctggattttaaaatccagattcatgtttattatttcggattttataa 19818976  T
Q  144 tctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || ||||||||||||||||||||||   |||||||  |||||||||||| || ||||||||||||||||    
T  19818975 tccggacaattcttatgtataatcacgcatcagac--tctcacatttcaacagttttgagttttgcttt 19818909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 42925144 - 42925266
Alignment:
Q  90 gtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatt 189  Q
    ||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  42925144 gtgcatttcggattttaaaatccggattcatgtttactattttggattttataatccggacaattcttatgtataatcagccatcagactctctcacatt 42925243  T
Q  190 tcagcatttttgagttttgcttt 212  Q
    | | || ||||||||||||||||    
T  42925244 ttaacagttttgagttttgcttt 42925266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 24041684 - 24041818
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||| ||||||||||| | || ||||||||||||||||| |||||||||||  |||||||||||||||||||||   ||||||    
T  24041684 aaaaatgcccttgtgcattccagattttaaaattcggaatcatgtttactatttcggattttataatcctgacaattcttatgtataatcagccatcaga 24041783  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| | || ||||||||||||||||    
T  24041784 ctctctcacattttatcagttttgagttttgcttt 24041818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 114 - 212
Target Start/End: Original strand, 36468079 - 36468177
Alignment:
Q  114 gattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  36468079 gattcatgtttactattttggattttataatccggacaattcttatgtataatcaaccatcagactctctcacatttcagcagttttgagttttgcttt 36468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 47203134 - 47203017
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||||    
T  47203134 ttccggatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagc 47203035  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  47203034 agttttgagttttgcttt 47203017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 3936697 - 3936517
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||| ||| ||  ||||||| ||| |||| |||| ||||| ||||||||||||||||||  ||||||||||||||||    
T  3936697 attacttttcccaccctatggccttcttccgcgccctgtaaaattttcaaaaatgcccttgtgtattccggattttaaaatctggattcatgtttactat 3936598  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||   ||||||||||| ||||||||||||||||||||||   |||||||  |||||||| | |||| ||||||||||| ||||    
T  3936597 tttagattttataatccggacaattcttatgtataatcagccatcagac--tctcacatgtaagcagttttgagttttacttt 3936517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 42864548 - 42864728
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| || | || || ||||||||||||  | ||||| ||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42864548 attacttttctcaccttaaggccttctcccgtgccctctaaaattttcaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactat 42864647  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || | ||||||||||| |||||||||||| ||||| |||   ||||||  |||||||||||||||  |||||| |||||||||    
T  42864648 tttggattttataatccggacaattcttaagtatattcagccatcaga--ctctcacatttcagctgttttgaattttgcttt 42864728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 8155545 - 8155428
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | |||||||| ||||||||||||||| | ||||||||||| ||||||| ||||||||||||||   |||||| ||||||||||||||||    
T  8155545 ttccggatttcataatccagaatcatgtttactattttggattttataatccggacaatacttatgtataatcagccatcagaatctctcacatttcagc 8155446  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  8155445 agttttgagttttgcttt 8155428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 31643694 - 31643577
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||| ||| | ||||| || ||||||||||||||||| ||||||||||| |||||||||||||||||||||||  |||||| ||||||| ||||||||    
T  31643694 ttccggctttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcaaccatcagaatctctcatatttcagc 31643595  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  31643594 agttttgagttttgcttt 31643577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 36409029 - 36408886
Alignment:
Q  68 taaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatc 167  Q
    ||||| || ||||| |||||||||||||| || |||||||||| | |||| ||||||||||||||  |||||| |||| ||| |||||||||||||||||    
T  36409029 taaaatttctaaaaatgcctttgtgcatttcgaattttaaaattcggatt-atgtttactatttcagattttacaatccggataattcttatgtataatc 36408931  T
Q  168 aaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |  ||||||||||| ||||||||||| | ||||||||||||||||    
T  36408930 agttatcagactctttcacatttcagtagttttgagttttgcttt 36408886  T

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Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 42925414 - 42925497
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||| ||||    
T  42925414 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaagggagtcatggtcc 42925497  T

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Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 9152173 - 9152093
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||    
T  9152173 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtcc 9152093  T

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Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 37518040 - 37518120
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||| ||||    
T  37518040 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtctcttctatgggagtcatggtcc 37518120  T

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Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 18951380 - 18951494
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| |||||||||||||  || |    
T  18951380 cggatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttctccagt 18951479  T
Q  198 tttgagttttgcttt 212  Q
    |||||||||| ||||    
T  18951480 tttgagttttacttt 18951494  T

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Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 19225372 - 19225450
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||    
T  19225372 atgaaaaatggatctaaacgatggaattttggattttgaggggcggagtcctgtaagaagttccttctatgggagtcat 19225450  T

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Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 327 - 425
Target Start/End: Original strand, 36468291 - 36468389
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||| || |||||||||||||||  ||||||| ||||||  |||||||||    
T  36468291 tttttcgtatttttatgagaatatgaaaaatgggtctaaacgatgaaattttgaatcttgaggggcggagtcccgtaagaagtccctttaaagggagtc 36468389  T

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Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 3304261 - 3304374
Alignment:
Q  99 ggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcattt 198  Q
    |||||| | |||||||| ||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||   |||||| ||||||| ||||| ||| ||    
T  3304261 ggatttcataatccagaatcatgtttattatttcggattttataatccggataattcttatgtataatcagccatcagaatctctcatatttcggcagtt 3304360  T
Q  199 ttgagttttgcttt 212  Q
    ||||||||||||||    
T  3304361 ttgagttttgcttt 3304374  T

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Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 24689829 - 24689958
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcag 176  Q
    |||| |||||||||| | | |||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||   ||||     
T  24689829 aaaaatgcctttgtgtaattcggattttaaaatccgtattcatgtttcactatttcgaattttataatccggacaattcttatgtataatcagccatcaa 24689928  T
Q  177 actctctcacatttcagcatttttgagttt 206  Q
    ||||||| | ||||||  | ||||||||||    
T  24689929 actctctgatatttcaatagttttgagttt 24689958  T

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Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 47202872 - 47202789
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||| ||||||||| ||||||||| ||||    
T  47202872 atgaaaaatgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagtcccttctatgggagtcatggtcc 47202789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 31985291 - 31985369
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||    
T  31985291 atgaaaaatgggtctaaacgattgaattttggagtttgaggggcagagtcctgtaagaaatcccttctatgagagtcat 31985369  T

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Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 6467837 - 6467921
Alignment:
Q  118 catgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttga 202  Q
    |||||||||| ||||| ||||||||||| | ||||||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  6467837 catgtttactttttcggattttataatccgaacaattcttatgtataatcagtcatcagactctctcacatttcagcagttttga 6467921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 43737467 - 43737384
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    ||||| | ||||||||||||||||| ||||    
T  43737467 atgaaaaatgggtctaaacgatggaattttagattttgaggggcggagtcccacaagaagttccttctaagggagtcatggtcc 43737384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 7115046 - 7115119
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||  ||||||| |||||||||||||||||    
T  7115046 aaaaatgggtctaaacaatggaattttggattttgagggaaggagtcccgtaagaagtcccttctaagggagtc 7115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 19818764 - 19818682
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| ||||||  ||||||| ||||||||| ||||||||| ||||    
T  19818764 atgaaaaataggtctaaacgatggaattttgga-tttgaggggtggagtcccgtaagaagtcccttctacgggagtcatggtcc 19818682  T

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Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 24041971 - 24042034
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccc 412  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||    
T  24041971 atgaaaaatgggtctaaacgatggagttttggattttgaggggcggagtcccgtaagaagtccc 24042034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 31643425 - 31643342
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||||||   |||||| | ||||||||||||||||| ||||    
T  31643425 atgaaaaatgggtctaaataatggaattttggattttgaggggtggagtcccataagaagttccttctaagggagtcatggtcc 31643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 33573822 - 33573889
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttct 416  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||| ||||||||    
T  33573822 atgaaaaatgggtctaaacaatgaaattttggattttgaggggcggagtcccgtaagaagtcccttct 33573889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 43186157 - 43186094
Alignment:
Q  362 ctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||    
T  43186157 ctaaacgatggaattttggatttttaggggcggagtcccgtaagaagtcccttctaagggagtc 43186094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 48705775 - 48705846
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaaggga 422  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||| ||||||||| ||||    
T  48705775 gaaaaatgggtctaaacgatgaaattttggaatttgaggggcggagtcctataagaagtcccttctacggga 48705846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 8155280 - 8155206
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| | |||| || |||||||||    
T  8155280 aaaatgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagttccttgtacgggagtcat 8155206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 26554721 - 26554791
Alignment:
Q  142 aatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||    
T  26554721 aatccggacaatgcttatgtataaccaaccatcagactctctcacatttcagcagttttgagttttgcttt 26554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 423
Target Start/End: Original strand, 8214377 - 8214442
Alignment:
Q  358 gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggag 423  Q
    ||||||||| |||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||||    
T  8214377 gggtctaaaagatggaattttggattgtgaggggcgaagtctcgtaagaagtcccttctaagggag 8214442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 16278395 - 16278322
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||||||  ||||||| |||||||||||||||||    
T  16278395 aaaaaagggtctaaacgatgaaattttggattttgatgtgcggagtcccgtaagaagtcccttctaagggagtc 16278322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 26554937 - 26554986
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26554937 atgaaaaatgggtctaaacgatggaattttggattttgaggggcagagtc 26554986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 42864878 - 42864959
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatc-ccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||   |||||| || | ||||||||||||||| ||||    
T  42864878 aaaaatgggtctaaacgattgaattttggattttgaggggcggagtcccataagaagtctctttctaagggagtcatggtcc 42864959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 3304528 - 3304608
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||  ||||||| |||||||||  |||||||| ||||    
T  3304528 aaaaataggtctaaacaatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtcc 3304608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 36629585 - 36629505
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||| |||||||||||||||||||||||||||| ||  ||||||  ||||||| ||||||||| ||||||||| ||||    
T  36629585 aaaaatgagtctaaacgatggaattttggattttgaaggatggagtcccgtaagaagtcccttctacgggagtcatggtcc 36629505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 5731063 - 5731128
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| |||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  5731063 ggtctaaatgatggaattttggattttga-gggtggagtctcgtaagaagtcccttctaagggagtc 5731128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 28230266 - 28230315
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  28230266 atgaaaaatgggtctaaacgatggaattttagattttgaggggtggagtc 28230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 6466914 - 6466960
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  6466914 aaaaatgggtctaaacgatgaaattttagattttgaggggcggagtc 6466960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 31985072 - 31985170
Alignment:
Q  115 attcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||| |||| |||| ||||||||||| | || || ||||||||||||||   |||||| ||||| ||||||||||| |||||| |||||||||    
T  31985072 attcatgtttcactaattcggattttataatccgaactatgcttatgtataatcagcaatcagaatctcttacatttcagcagttttgaattttgcttt 31985170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 30861464 - 30861399
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaa 418  Q
    ||||||||||||||||||| ||||||| |||| |||||| ||| || |||||||| ||||||||||    
T  30861464 aaaatgggtctaaacgatgaaattttgaatttcgaggggaggaatcctgtaagaagtcccttctaa 30861399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 33573566 - 33573676
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||| | ||||| || ||||||||||||||| | ||||||||||| | ||||||||||| ||||  |    |||||| ||||||||||||||||| |    
T  33573566 cggatttcataatccggaatcatgtttactattttggattttataatccgaacaattcttatatatagcc----atcagaatctctcacatttcagcagt 33573661  T
Q  198 tttgagttttgcttt 212  Q
    ||| |||| ||||||    
T  33573662 tttaagttctgcttt 33573676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 32701034 - 32701110
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||| |||||||| ||  |||||||||||  ||| |  ||||||| |||||||||||||||||    
T  32701034 atgaaaaatgggtctaaaagatggaatgttaaattttgaggggaagagccccgtaagaagtcccttctaagggagtc 32701110  T

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Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 1519096 - 1519050
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  1519096 aaaaatggatctaaacgatggaattttagattttgaggagcggagtc 1519050  T

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Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 28230054 - 28230115
Alignment:
Q  151 aattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||   |||||||| |||||||||| |||| ||||||||||| ||||    
T  28230054 aattcttatgtataatcatgcatcagactttctcacattttagcagttttgagttttacttt 28230115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 30861660 - 30861603
Alignment:
Q  155 cttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||  |||||| ||||||||||||||| | |||||| |||||||||    
T  30861660 cttatgtataatcaacaatcagaatctctcacatttcaggagttttgaattttgcttt 30861603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 36408776 - 36408702
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-------gggtctaaacgatggaattttggattttgaggggcgga 395  Q
    |||||||||||||| ||||||||||||||||       || ||||| |||||||||||||||||||||||||||||    
T  36408776 tttttcggatttttttgagaatatgaaaaatttaaaatggatctaa-cgatggaattttggattttgaggggcgga 36408702  T

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Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 418
Target Start/End: Original strand, 47239492 - 47239561
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaa 418  Q
    ||||||||  || |||||||||| |||||||||||||||| |||| ||||  ||||||| ||||||||||    
T  47239492 atgaaaaacaggactaaacgatgaaattttggattttgagaggcgaagtcccgtaagaagtcccttctaa 47239561  T

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Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 37217509 - 37217540
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggatt 383  Q
    ||||||||||||||||||||||||||||||||    
T  37217509 aaaaatgggtctaaacgatggaattttggatt 37217540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 1519139 - 1519109
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  1519139 tttttcggatttttctgagaatatgaaaaat 1519109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 36629630 - 36629600
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  36629630 tttttcggatttttctgagaatatgaaaaat 36629600  T

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Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 43737506 - 43737476
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  43737506 tttttcggatttttctgagaatatgaaaaat 43737476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 19818803 - 19818774
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaa 356  Q
    ||||||||||||||||||||||||||||||    
T  19818803 tttttcggatttttctgagaatatgaaaaa 19818774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 24690122 - 24690174
Alignment:
Q  361 tctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccct 413  Q
    |||||||||| ||||||||||||||||||||   |||| |||||||| |||||    
T  24690122 tctaaacgattgaattttggattttgaggggtaaagtcctgtaagaagtccct 24690174  T

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Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 42864835 - 42864863
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  42864835 tttcggatttttctgagaatatgaaaaat 42864863  T

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Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 32817247 - 32817435
Alignment:
Q  26 atgacaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtt 123  Q
    ||||| ||||||||||||| ||||| | ||||||||| ||  ||||||| ||| |||| |||| ||||||||||||||||||||||||  ||||||||||    
T  32817247 atgactattacttttcccaccctatagccttctcccgcgccctgtaaaattttcaaaaatgcccttgtgcattccggattttaaaatctggattcatgtt 32817346  T
Q  124 tactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  32817347 tactatttcggattttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 32817435  T

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Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 44572589 - 44572736
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||   ||||||||||||| ||||||||||| ||||    
T  44572589 ctgtaaaatttccaaaattgcccttgtgcattccggattttaaaatctagattcatatttactattttagattttataatctgaacaattcttatatata 44572688  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  44572689 atcaaacatcagactctctcacatttcagcagttttgagttttgcttt 44572736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 34162230 - 34162417
Alignment:
Q  27 tgacaattacttttcccatcctatggtcttctcccgtgctgtaaaaatttt--aaaattgcctttgtgcattccggattttaaaatccagattcatgttt 124  Q
    |||| ||||||||||||| ||||||  ||||||||| ||  || || ||||  |||| |||| ||||||||||||||||||||||||| |||||||||||    
T  34162230 tgactattacttttcccaccctatgaccttctcccgcgccctataatttttccaaaaatgcccttgtgcattccggattttaaaatccggattcatgttt 34162329  T
Q  125 actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||   |||||||||||||| |||| | || ||||||||||||||||    
T  34162330 actatttcggattttataatccggacaattattatgtataatcagtcatcagactctctcaaattttaacagttttgagttttgcttt 34162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 45046309 - 45046485
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| |||| |||||||||||| ||  ||||||| ||  |||| |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  45046309 attacttttcccaccctacggtcttctcccgcgccctgtaaaatttccaaaaatgcccttgtgtattccagattttaaaatccagattcatgtttactat 45046408  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttg 208  Q
    ||| |||||||||||| |||||||| |||||||||||||   ||||||  |||||||||||||||| ||||||||||||    
T  45046409 ttcaaattttataatccggacaatttttatgtataatcagccatcaga--ctctcacatttcagcagttttgagttttg 45046485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 40907411 - 40907554
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  40907411 ctgtaaaattttcaaaaatgtcattgtgcattccggattttaaaatccggattcatgtttactatttcagattttataatccggacaatttttatgtata 40907510  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttg 208  Q
    ||||   |||||||||||||||||||||||| ||||||||||||    
T  40907511 atcagtcatcagactctctcacatttcagcaattttgagttttg 40907554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 49678124 - 49677977
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| |||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||     
T  49678124 ctgtaaaatttccaaaaatgcccttgtgcattttggattttaaaattcagattcatgtttactatttcggattttataatccggacaattcttatgtatt 49678025  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   |||||||||||||||||||||||| ||||||||||||||||    
T  49678024 atcagccatcagactctctcacatttcagcaattttgagttttgcttt 49677977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 17000967 - 17000843
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||||    
T  17000967 ttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttatgtataatcagtcatcagactctctcaca 17000868  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||| | || ||||||||||| ||||    
T  17000867 ttttaacagttttgagtttttcttt 17000843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 40650152 - 40650333
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||  ||||||||| ||  ||||||| ||   ||| |||||  ||||||| ||||||||||||||| ||||||||||||||||    
T  40650152 attacttttcccaccctatgaccttctcccgcgccatgtaaaatttccgaaaatgcctg-gtgcatttcggattttaaaatccggattcatgtttactat 40650250  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| |||||||||||  |||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  40650251 ttcggattttataatccagacaattcttatgtttaatcagcaatcagactctctcacatttcagcaattttgagttttgcttt 40650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 45567384 - 45567530
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||| |||| || |||||||||| ||||||||||||||||  ||||||||||||||||| | ||||||||||| ||||||||||||||| ||    
T  45567384 ctgtaaaattttcaaaaatgtctttgtgcat-ccggattttaaaatccgaattcatgtttactattttggattttataatccggacaattcttatgtgta 45567482  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   |||||||||||||||||||||||| ||||||||||||||||    
T  45567483 atcagccatcagactctctcacatttcagcagttttgagttttgcttt 45567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 41584093 - 41584227
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||| | ||||||||||  |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||    
T  41584093 aaaaatgcccttgtgcattccaggttttaaaatctggattcatgattactatttcggattttataatccggacaattcttatgtataatcagtcatcaga 41584192  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| | || ||||||||||||||||    
T  41584193 ctctctcacattttaacagttttgagttttgcttt 41584227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 42546643 - 42546479
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| |||||||||| ||||||||| |  |||||||| ||  |||| || | ||||||||| ||||||||||||||| ||||||||||||||||    
T  42546643 attacttttctcatcctatggccttctcccgcgtcctgtaaaatttccaaaaatgtccttgtgcatttcggattttaaaatccggattcatgtttactat 42546544  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagca 195  Q
    |||  |||| ||||||  |||||||||||||||||||||   ||||||||||||||||||||||||    
T  42546543 ttcagattt-ataatccagacaattcttatgtataatcagccatcagactctctcacatttcagca 42546479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 335 - 432
Target Start/End: Original strand, 45046610 - 45046707
Alignment:
Q  335 atttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||    
T  45046610 atttttctgagaatataaaaaatggatctaaacgatggaattttggattttgaggggcggagtctcataagaagtcccttctaagggagtcatggtcc 45046707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 52744387 - 52744484
Alignment:
Q  115 attcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||    
T  52744387 attcatgtttactatttcgaattttataatccggacaattcttatgtataatcagccatcagactctttcacatttcagcagttttgagttttgcttt 52744484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 38885892 - 38885747
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||||||||||| | ||||||||||  |||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||    
T  38885892 ctgtaaaatttttaaaattgtccttgtgcattctcgattttaaaatccagattcatgtttactatttggggttttataatccggacaattcttatgtata 38885793  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   |||| |  |||||| |||| |||| ||||||||||||||||    
T  38885792 atcagtcatcaaa--ctctcatatttaagcagttttgagttttgcttt 38885747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 7011892 - 7011789
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7011892 ctgtaaaatttccaaaaatgcccttgtgcatttcggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttatgtata 7011793  T
Q  165 atca 168  Q
    ||||    
T  7011792 atca 7011789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 23443377 - 23443263
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||| | ||||||||||||||||| |    
T  23443377 cggatttcataatccagaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcacaatctctcacatttcagcagt 23443278  T
Q  198 tttgagttttgcttt 212  Q
    || ||||||||||||    
T  23443277 ttcgagttttgcttt 23443263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 34006931 - 34006797
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| ||| |||||||| ||||||||||||||| | ||||||  || ||||||||| ||||||||||| ||| |||| |||||||||||||   ||||||    
T  34006931 aaaaatgcatttgtgcaatccggattttaaaattcggattcagtttcactatttcggattttataatccggataatttttatgtataatcagccatcaga 34006832  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||| ||||||||||| ||||    
T  34006831 ctctctcacatttcagcagttttgagttttacttt 34006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 44937804 - 44937918
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||||| |    
T  44937804 cggatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagtcatcagaatctctcacatttcagcagt 44937903  T
Q  198 tttgagttttgcttt 212  Q
     ||||||||||||||    
T  44937904 attgagttttgcttt 44937918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 32542861 - 32542744
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||| | ||||||||||| ||||||||||||||||||||||   |||||| |||||||||||| |||    
T  32542861 ttccggatttcataatccggaatcatgtttactattttggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttaagc 32542762  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  32542761 agttttgagttttgcttt 32542744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 49677870 - 49677783
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccctt 414  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  49677870 tttttcggatttttctaagaatatgaaaaatgagtctaaacgatggaattttgaattttgaggggcggagtcccgtaagaagtccctt 49677783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 667303 - 667190
Alignment:
Q  100 gattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcattt 198  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||  |||||||||||||||||||| |   |||||||||||||||||||||| | ||    
T  667303 gattttaaaatccggattcatgtttcactatttcggattttataattcggacaattcttatgtataattagccatcagactctctcacatttcagtagtt 667204  T
Q  199 ttgagttttgcttt 212  Q
    ||||||||| ||||    
T  667203 ttgagttttacttt 667190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 4615595 - 4615413
Alignment:
Q  32 attacttttcccatcctatggtcttctcccg--tgctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| ||| ||| ||||||||||||  |  ||||||| ||| |||| |||   |||||| |  |||||||||||||  |||| |||||||||||    
T  4615595 attacttttctcattctacggtcttctcccgcatcttgtaaaattttcaaaaatgctcgtgtgcagtttggattttaaaatctggattaatgtttactat 4615496  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  ||||||||||| ||| ||||||| ||||||||||   || |||||||||||||||||| || ||||||||||||||||    
T  4615495 ttcatattttataatccggataattcttgtgtataatcagccattagactctctcacatttcaacagttttgagttttgcttt 4615413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 417
Target Start/End: Original strand, 41584332 - 41584423
Alignment:
Q  327 tttttcggatttttctgagaata-tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||||||||||||| || | |||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  41584332 tttttcggatttttctgaaaaaaatgaaaaatgggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtcccttcta 41584423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 42546352 - 42546270
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||||||||||||||||| ||||    
T  42546352 atgaaaaatgggtctaaacgatggaattttggattttga-gggcggagtcccgtaagaagttccttctaagggagtcatggtcc 42546270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 15069380 - 15069541
Alignment:
Q  54 cttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccaga-ttcatgtttactatttcgaattttataatctggac 150  Q
    ||||||||||||  ||||||| |||||||| |  | ||||| |||||| |||||||||  | || |||||||||||||||||| ||||||||||   |||    
T  15069380 cttctcccgtgccctgtaaaatttttaaaaatatcattgtgtattccgaattttaaaaatctgaattcatgtttactatttcggattttataattcagac 15069479  T
Q  151 aattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||| |   |||||||||| ||||||||||  | ||||||||||||||||    
T  15069480 aattcttatgtataataagcaatcagactctgtcacatttcattagttttgagttttgcttt 15069541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 33610935 - 33611029
Alignment:
Q  117 tcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgctt 211  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||   |||||| |||  ||||||||| || |||||||||||||||    
T  33610935 tcatgtttactatttcgaattttataattcggacaattcttatgtataatcagccatcagaatcttccacatttcaacagttttgagttttgctt 33611029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 28866404 - 28866481
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||| | ||||||||||||||||    
T  28866404 atgaaaaatgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaggaagtgccttctaagggagtca 28866481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 49786929 - 49786812
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||||||| ||||||| |||   |||||| ||| ||| ||||||||    
T  49786929 ttccggatttcataatccggaatcatgtttactatttcggattttataatccggacaattctaatgtatagtcagccatcagaatctttcatatttcagc 49786830  T
Q  195 atttttgagttttgcttt 212  Q
    | |||||| |||||||||    
T  49786829 agttttgaattttgcttt 49786812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 18583318 - 18583394
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| || |||||| |||||||    
T  18583318 atgaaaaatgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtctcttctatgggagtc 18583394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 6223255 - 6223381
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcac 186  Q
    ||||||| | ||||||| | |||||| |||||||||| |||| |||| |||||| ||||||||||||||||||| |||||||   |||||||||||||||    
T  6223255 ttgtgcagttcggatttcataatccaaattcatgtttcactaattcggattttaaaatctggacaattcttatgcataatcagccatcagactctctcac 6223354  T
Q  187 a-tttcagcatttttgagttttgcttt 212  Q
    | |||||||| |||||| |||| ||||    
T  6223355 attttcagcagttttgaatttttcttt 6223381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 40650478 - 40650527
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40650478 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 40650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 9445967 - 9446038
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  9445967 aaaaagggtctaaacgatgaaattttggattttga-gggcggagtcccgtaagaaatcccttctaagggagtc 9446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 27795215 - 27795147
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||    
T  27795215 atgaaaaacgggtctaaacgatgaaattttggattttgaggggcggagtcctgtaagaagtctcttcta 27795147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 41584442 - 41584522
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||  ||||||| ||||||||| ||||||||| ||||    
T  41584442 aaaaatgggtctaaacaatggaattttagattgtgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtcc 41584522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 6223530 - 6223604
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||  ||||||| || ||||||||||||||||    
T  6223530 aaaaatggatctaaacgatggaattttggattttgaggggcggtgtc-cgtaagaagtctcttctaagggagtcat 6223604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 18583090 - 18583173
Alignment:
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||| ||||||||||| | ||||||||||||||||||||   |||||| ||||||||||||||| | ||||||||||||||||    
T  18583090 tttcggattttataatccgaacaattcttatgtataatcagccatcagaatctctcacatttcagtagttttgagttttgcttt 18583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 40907711 - 40907786
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||| || | |||||||    
T  40907711 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttttatgagagtcat 40907786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 49786653 - 49786570
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||||  |||||| || |||||| ||||||||| ||||    
T  49786653 atgaaaaatgggtttgaacaatggaattttggattttgaggggcggagtctcataagaagtctcttctacgggagtcatggtcc 49786570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 52744617 - 52744700
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| ||||||||||||| ||||||| |||||||| || ||||||||||||||| ||||||||| | ||||||| ||||    
T  52744617 atgaaaaataggtctaaacgatgaaattttgaattttgagaggtggagtcttgtaagaagtcccttctatgagagtcatggtcc 52744700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 38885598 - 38885532
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttc 415  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||    
T  38885598 atgaaaaatgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaagtcccttc 38885532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 24472605 - 24472678
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||  | ||||| ||||||||| |||||||    
T  24472605 aaaaatgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctatgggagtc 24472678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 24472342 - 24472457
Alignment:
Q  98 cggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcat 196  Q
    |||||||||||||||  |||||| ||| |||| |||| ||||||||||| | || || |||||||||||||| | |||||| ||||||||||||||||      
T  24472342 cggattttaaaatccgaattcatttttcactaattcggattttataatccgaactatgcttatgtataatcagaaatcagaatctctcacatttcagccg 24472441  T
Q  197 ttttgagttttgcttt 212  Q
    |||| | |||||||||    
T  24472442 ttttaaattttgcttt 24472457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 800677 - 800742
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||||||||||||||||||||||| |||| |||||  ||||||| |||||||||||||||||    
T  800677 ggtctaaacgatggaattttggattttga-gggcagagtcccgtaagaagtcccttctaagggagtc 800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 34162532 - 34162590
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggatttt 385  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  34162532 ttttttggatttttctaagaatatgaaaaatgggtctacacgattgaattttggatttt 34162590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 28866175 - 28866228
Alignment:
Q  108 aatccagattcatgtttactatttcgaattttataatctggacaattcttatgt 161  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  28866175 aatccggattcatgtttactatttcggattttataatccggacaattcttatgt 28866228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 34006642 - 34006568
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||| |||||||| ||||| |||||||||||||||||| |||||||  ||||||| ||||||||| |||||||||    
T  34006642 aaaaacgggtctaa-cgatgaaattttggattttgagggacggagtcccgtaagaagtcccttctacgggagtcat 34006568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 33611187 - 33611249
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccctt 414  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||  ||||||| ||||||    
T  33611187 aaaaatgggtctaaacaatggaattttggattttgagggacgtagtcccgtaagaagtccctt 33611249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 17000719 - 17000670
Alignment:
Q  335 atttttctgagaatatgaaaaatgggtctaaacgatggaattttggattt 384  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  17000719 atttttctaagaatatgaaaaatgggtctagacgattgaattttggattt 17000670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 424
Target Start/End: Complemental strand, 23443123 - 23443048
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||||||| ||||| || |||||||||||||||||| || ||||| || ||||| || |||||| ||||||    
T  23443123 atgaaaaatgggtttaaacaatagaattttggattttgaggagcagagtcgtgcaagaagtctcttctatgggagt 23443048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 42929266 - 42929208
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||||||  ||||||||||||||||||| ||||||| ||| || |||||||||||||    
T  42929266 atgaaaaatatgtctaaacgatggaatttttgattttgggggacgaagtcttgtaagaa 42929208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 8704295 - 8704360
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||| || |||||||| ||||||||||||||||||| | ||||  ||||||| |||||||||    
T  8704295 aaaaatggatcaaaacgatgaaattttggattttgaggggtgtagtcccgtaagaagtcccttcta 8704360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 9445714 - 9445791
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| || ||||||||||||||   |||| | |||||| |||||||||| |||||| |||||||||    
T  9445714 atttcataatctggactatgcttatgtataatcagcaatcataatctctcccatttcagcaattttgaattttgcttt 9445791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 43319062 - 43319134
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||| |||| |||||||||||||||||||| ||||||||||  ||||||| || ||||||||| ||||    
T  43319062 aaaaaagggtgtaaatgatggaattttggattttga-gggcggagtcccgtaagaagtctcttctaaggaagtc 43319134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 27795382 - 27795346
Alignment:
Q  172 atcagactctctcacatttcagcatttttgagttttg 208  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27795382 atcagactctctcacatttcagcagttttgagttttg 27795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 44572885 - 44572957
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||| |||||||| ||||||| ||||||||||   |||||| || |||||| ||||||||| ||||    
T  44572885 gtctaaacgatagaattttgaattttgatgggcggagtcccctaagaagtctcttctatgggagtcatggtcc 44572957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 3561109 - 3561156
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggag 396  Q
    ||||||||| |||||||| |||| ||||||| ||||||||||||||||    
T  3561109 atgaaaaataggtctaaaagatgaaattttgaattttgaggggcggag 3561156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 38131264 - 38131221
Alignment:
Q  355 aatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||| |||||||||||||| |||||||||||||||||| |||||    
T  38131264 aatgagtctaaacgatggagttttggattttgaggggcagagtc 38131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 44037246 - 44037191
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||| || |||||||||||||||||| |||||||||||| || |||| |||||||    
T  44037246 aaaaaaggatctaaacgatggaattttagattttgaggggtggtgtctcgtaagaa 44037191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 6099718 - 6099764
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||| ||||||||||||  |||||||||||||||||||| |||||    
T  6099718 aaaaataggtctaaacgattaaattttggattttgaggggcagagtc 6099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 6099898 - 6099944
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||| ||||||||||||  |||||||||||||||||||| |||||    
T  6099898 aaaaataggtctaaacgattaaattttggattttgaggggcagagtc 6099944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 27400069 - 27400123
Alignment:
Q  363 taaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||  |||||| ||||||||||||||||||| |||||||| | |||||||    
T  27400069 taaacgataaaattttcgattttgaggggcggagtcctgtaagaagttccttcta 27400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 38885633 - 38885603
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  38885633 tttttcggatttttctgagaatatgaaaaat 38885603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 42546392 - 42546362
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  42546392 tttttcggatttttctgagaatatgaaaaat 42546362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 45567643 - 45567673
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  45567643 tttttcggatttttctgagaatatgaaaaat 45567673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 3561067 - 3561096
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaa 356  Q
    ||||||||||||||||||||||||||||||    
T  3561067 tttttcggatttttctgagaatatgaaaaa 3561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 44938073 - 44938114
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||    
T  44938073 atgaaaaatgggtctaaacaatgaaattttgaattttgaggg 44938114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 52744574 - 52744603
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaa 356  Q
    ||||||||||||||||||||||||||||||    
T  52744574 tttttcggatttttctgagaatatgaaaaa 52744603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 11384305 - 11384349
Alignment:
Q  354 aaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||||| ||||||||||||| |||| || |||||||||    
T  11384305 aaatgggtctaaaagatggaattttggttttttagtggcggagtc 11384349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 24472562 - 24472590
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  24472562 tttcggatttttctgagaatatgaaaaat 24472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 40907669 - 40907697
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  40907669 tttcggatttttctgagaatatgaaaaat 40907697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 4268096 - 4268243
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  4268096 ctgtaaaatttttaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactattttgcattttataatctgaacaattcttatgtata 4268195  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||  |||||||||||||||||||||||| ||||||||||||||||    
T  4268196 atcaaccatcagactctctcacatttcagcagttttgagttttgcttt 4268243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 41509908 - 41510055
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  41509908 ctgtaaaatttccaaaattgctcttgtgcattccggattttaaaatccagattcatgtttattatttcggattttataatccggacaattcttatgtata 41510007  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   |||||||||||||||||||||||| |||||| |||||||||    
T  41510008 atcattcatcagactctctcacatttcagcagttttgaattttgcttt 41510055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 44465194 - 44465376
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||| |||||||| | ||||| ||||||||| |  || ||||| ||  |||| |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  44465194 attagttttcccaccttatggccttctcccgcgacctttaaaatttccaaaaatgcccttgtgcattccggattttaaaattcggattcatgtttactat 44465293  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||| ||||||||||||||||||||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  44465294 ttcgaattttataatccggacaattcttatgtataatcagccatcaaactctctcacatttcagcagttttgagttttgcttt 44465376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 32187321 - 32187506
Alignment:
Q  29 acaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttac 126  Q
    ||||||||||||||||  |||||  ||||||||| ||  ||||||| ||| |||| |||  ||||||||||||||||||||||||| |||||||||||||    
T  32187321 acaattacttttcccactctatgaccttctcccgcgccctgtaaaattttcaaaaatgctcttgtgcattccggattttaaaatccggattcatgtttac 32187420  T
Q  127 tatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||   ||||||||||  ||||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||||    
T  32187421 tattttagattttataattcggacaattcttatgtataatcagccatcagactctctcacatttcaacagttttgagttttgcttt 32187506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 16749883 - 16750050
Alignment:
Q  27 tgacaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt 124  Q
    |||| ||||| ||||||| ||||||  ||||||||| ||  ||||||| ||| ||||||||  || |||||||||||||||||||||| |||||||||||    
T  16749883 tgactattacctttcccaccctatgaccttctcccgcgccctgtaaaattttcaaaattgctattttgcattccggattttaaaatccggattcatgttt 16749982  T
Q  125 actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttca 192  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  16749983 actattttgaattttataatccggacaattcttatgtataatcagctatcagactttctcacatttca 16750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 17474236 - 17474417
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||| ||  ||||||| ||  |||| |||| ||| | ||||||||||||||||||| ||||||||||||||||    
T  17474236 attacttttcccaccctatggccttctcccgcgccctgtaaaa-ttccaaaaatgcccttgggtattccggattttaaaatccggattcatgtttactat 17474334  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  ||||||||||| | ||||||||| ||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  17474335 ttcagattttataatccgaacaattcttgtgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 17474417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 33451937 - 33452084
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| |||| ||||| ||||||||||||   |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  33451937 ctgtaaaatttccaaaaatgcccttgtacattctggattttaaaatttggattcatgtttactatttcggattttataatccggacaattcttatgtata 33452036  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   |||||||||||||||||||||||| ||||||||||||||||    
T  33452037 atcagccatcagactctctcacatttcagcagttttgagttttgcttt 33452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 45153380 - 45153524
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||| |||| |||| ||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||||| | ||||||||||||||||    
T  45153380 ctgtaaaattttcaaaaatgcccttgtgcattccagattttaaaatccggattcatgtttgctattttggattttataatccgaacaattcttatgtata 45153479  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgc 209  Q
    ||||   |||||||||||||||||||||| | |||||||||||||    
T  45153480 atcagccatcagactctctcacatttcagtagttttgagttttgc 45153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 33452189 - 33452294
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||| || ||||||||    
T  33452189 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcgcttttatgggagtca 33452288  T
Q  427 tagtcc 432  Q
    | ||||    
T  33452289 tggtcc 33452294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 212
Target Start/End: Complemental strand, 8451010 - 8450827
Alignment:
Q  31 aattacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttacta 128  Q
    |||||||||| ||| |||||  |||||||||| |  |||||||| ||  |||| |||| ||||| |||| ||||||||||||   |||||||||||||||    
T  8451010 aattacttttaccaccctataatcttctcccgcgtcctgtaaaatttccaaaaatgcccttgtgtattctggattttaaaatttggattcatgtttacta 8450911  T
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||| | ||||||||||   |||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  8450910 ttttggattttataattcagacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 8450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 38308319 - 38308467
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtat 163  Q
    |||||||| ||| |||| |||| ||||| | | |||||||||||||||| |||||||||| ||||||||| |||||||| || |||||||||||||||||    
T  38308319 ctgtaaaattttcaaaaatgcccttgtgtaattcggattttaaaatccaaattcatgtttcactatttcggattttatactccggacaattcttatgtat 38308418  T
Q  164 aatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||   |||| ||||||||||||||||||| ||||||||||| ||||    
T  38308419 aatcagtcatcaaactctctcacatttcagcagttttgagtttttcttt 38308467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 25217254 - 25217393
Alignment:
Q  68 taaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatc 167  Q
    ||||| ||| |||| |||| || |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| | ||||||||||||| |||||    
T  25217254 taaaattttcaaaaatgcccttctgcattccggattttaaaatctggattcatgtttactatttcggattttataatccgaacaattcttatgtgtaatc 25217353  T
Q  168 aaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    |   |||||| ||||||||||||||||| |||| ||||||    
T  25217354 agccatcagattctctcacatttcagcagttttaagtttt 25217393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 36948644 - 36948748
Alignment:
Q  108 aatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| |||||||||||||| || |||||||||||    
T  36948644 aatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcaacagttttgagtttt 36948743  T
Q  208 gcttt 212  Q
    |||||    
T  36948744 gcttt 36948748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 39447806 - 39447690
Alignment:
Q  85 cctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctc 184  Q
    |||||||| ||| ||||||||||||||| ||||||| |||||||||||| ||||||||||| | ||||||||||||||||||||   |||||| ||||||    
T  39447806 cctttgtgtatttcggattttaaaatccggattcatatttactatttcggattttataatccgaacaattcttatgtataatcagtcatcagagtctctc 39447707  T
Q  185 acatttcagcatttttg 201  Q
    |||||||| || |||||    
T  39447706 acatttcaacagttttg 39447690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 42894759 - 42894679
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||| ||||    
T  42894759 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagttccttctaagggagtcatggtcc 42894679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 25217543 - 25217626
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||    
T  25217543 atgaaaaatgggtctaaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtcc 25217626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 212
Target Start/End: Original strand, 41854348 - 41854517
Alignment:
Q  40 tcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaatt 137  Q
    ||||||||||||||||||||||| ||  ||||||| ||  |||| || | |||||||||  ||||||||||||   |||||||||||||||||||| |||    
T  41854348 tcccatcctatggtcttctcccgcgccatgtaaaatttccaaaaatgtccttgtgcattatggattttaaaatttggattcatgtttactatttcggatt 41854447  T
Q  138 ttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||   ||||||||||||||||||||||   ||      |||||||||||||||| ||||||||||||||||    
T  41854448 ttataactcggacaattcttatgtataatcagccat-----actctcacatttcagcagttttgagttttgcttt 41854517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 44465509 - 44465592
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||    
T  44465509 atgaaaaatgggtctaaaagatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtcc 44465592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 42894986 - 42894909
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  42894986 attttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 42894909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 17474570 - 17474650
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |  |||||||||||||||| ||||    
T  17474570 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtttcttctaagggagtcatggtcc 17474650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 15994636 - 15994718
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatg 160  Q
    ||||||| | |||||||||| |||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  15994636 aaaattgtccttgtgcattctggattttaaaattcagattcatgtttactattttggattttataatccggacaattcttatg 15994718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 38308572 - 38308679
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-------gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaag 419  Q
    ||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||   ||| || |||||||||||    
T  38308572 tttttcggatttttcggagaatatgaaaaatcaaaaaagggtctaaacaatggaattttggattttgaggggcggagtccaataaaaattcccttctaag 38308671  T
Q  420 ggagtcat 427  Q
    ||||||||    
T  38308672 ggagtcat 38308679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 27670881 - 27670803
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||  || ||||||||||||||||    
T  27670881 atgaaaaatgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaggtctcttctaagggagtcat 27670803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 34517488 - 34517410
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||  ||||||| ||||||||| |||||||||    
T  34517488 atgaaaaattggtctaaacgatggaattttggattttgaggtgcggaatcccgtaagaagtcccttctatgggagtcat 34517410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 41854672 - 41854750
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| | |||||||| || |||||    
T  41854672 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagttccttctaatggtgtcat 41854750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 38065123 - 38065200
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||  ||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||    
T  38065123 atttcataatccagacaattcttatgtataatctgctatcagactctctcacatttcagcagttttgagttttgcttt 38065200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 17133110 - 17133034
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||  |||| || || ||||||||||||||    
T  17133110 atgaaaaatgggtctaaacgatgaaattttggattttgagggtcggagtcccgtaaaaagtctcttctaagggagtc 17133034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 39447542 - 39447474
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  39447542 atgaaaaatcggtctaaacgatgtaattttggattttgaggggcggagtcccgtaagaagtcccttcta 39447474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 11457358 - 11457264
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaaggga 422  Q
    ||||||| |||||| ||||| || ||||||| ||||||||||||||||||||  |||||||||| |||||||| ||||||| ||||||||| ||||    
T  11457358 tttttcgaatttttatgaga-taagaaaaattggtctaaacgatggaattttaaattttgagggacggagtctcgtaagaagtcccttctatggga 11457264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 403
Target Start/End: Original strand, 16750216 - 16750267
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgta 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16750216 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcctgta 16750267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 417
Target Start/End: Original strand, 15994890 - 15994956
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||| |||||    
T  15994890 gaaaaatgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtccattcta 15994956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 38065350 - 38065424
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| || ||||||  ||||||||    
T  38065350 aaaatgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtctcttctacaggagtcat 38065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 41202958 - 41203036
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| | || |||||| | |||||||    
T  41202958 atgaaaaatgggtctaaacgatgaaattttggattttgatgggcggagtcctgtaaggagtctcttctacgagagtcat 41203036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 5507805 - 5507757
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5507805 atgaaaaatgagtctaaacgatggaattttggattttgaggggcggagt 5507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 32187656 - 32187711
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  32187656 aaaaatgggtctaaacgatggaattttggattttgaggggtggagtcccgtaagaa 32187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 30764028 - 30763967
Alignment:
Q  356 atgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  30764028 atgggtctagacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttcta 30763967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 41204320 - 41204267
Alignment:
Q  334 gatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttga 387  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||    
T  41204320 gatttttatgagaatatgaaaaatgagtctaaacgatgaaattttggattttga 41204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 41510201 - 41510281
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||   |||||| | ||||||||| ||||||| ||||    
T  41510201 aaaaaggggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagttccttctaagagagtcatggtcc 41510281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 25715835 - 25715770
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| |||||||||||||||||||| ||||||||||   ||||||||| ||||||||||||||    
T  25715835 ggtctaaatgatggaattttggattttga-gggcggagtcccataagaaatctcttctaagggagtc 25715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 33440282 - 33440344
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccctt 414  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||  ||||||| ||||||    
T  33440282 aaaaatggatctaaacgatggaattttgaattttgagaggcggagtcccgtaagaagtccctt 33440344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 34517766 - 34517643
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcac 186  Q
    ||||||| | ||||||| | |||||  |||||||||| |||| |||| ||| || |||| ||||||| ||||||||||||||   || |||  |||||||    
T  34517766 ttgtgcaattcggatttcataatccgaattcatgtttcactaattcggattctaaaatccggacaatgcttatgtataatcagtcattaga--ctctcac 34517669  T
Q  187 atttcagcatttttgagttttgcttt 212  Q
    ||||||||| ||||||||||||||||    
T  34517668 atttcagcagttttgagttttgcttt 34517643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 19109768 - 19109813
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatgg 372  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  19109768 tttttcggatttttctaaaaatatgaaaaatgggtctaaacgatgg 19109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 27671091 - 27671034
Alignment:
Q  155 cttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||| |||||   |||||||||||||||||||||||| ||||||||||||||||    
T  27671091 cttatgtaaaatcagtcatcagactctctcacatttcagcagttttgagttttgcttt 27671034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 9847075 - 9847150
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| ||||||||| ||||| |||||||||||||| | ||||||||  ||||||| || ||||||||||||||    
T  9847075 atgaaaaaagggtctaaatgatgggattttggattttga-gagcggagtcccgtaagaagtctcttctaagggagtc 9847150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 35251313 - 35251269
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  35251313 aaaatgggtctaaacgatgaaattttggattttaaggggcggagt 35251269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 8389056 - 8388980
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-------gggtctaaacgatggaattttggattttgaggggcggag 396  Q
    |||||||||||||| |||| |||||||||||       |||||||||||||||||||||||||||||| ||| ||||    
T  8389056 tttttcggatttttttgagtatatgaaaaataaaaattgggtctaaacgatggaattttggattttgaagggtggag 8388980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 36948805 - 36948851
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  36948805 aaaaatgggtctaaacaatggaatttaggattttgaagggcggagtc 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 8389281 - 8389180
Alignment:
Q  101 attttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttt 199  Q
    |||||||||| |  |||||||||| |||| |||| ||||||||||||| || ||  |||||||||||||   |||| | ||||||||||||||||| |||    
T  8389281 attttaaaattcgaattcatgtttcactaattcggattttataatctgaactatgtttatgtataatcagcaatcataatctctcacatttcagcagttt 8389182  T
Q  200 tg 201  Q
    ||    
T  8389181 tg 8389180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 42604795 - 42604844
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  42604795 atgaaaagtgggtctaaacgatgaaattttggattttaaggggcgaagtc 42604844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 5507844 - 5507814
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  5507844 tttttcggatttttctgagaatatgaaaaat 5507814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 27900387 - 27900437
Alignment:
Q  354 aaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaa 404  Q
    |||| ||| ||||||||||||||||||||| ||||||| ||||||| ||||    
T  27900387 aaataggtttaaacgatggaattttggattatgaggggaggagtctcgtaa 27900437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 34517530 - 34517500
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  34517530 tttttcggatttttctgagaatatgaaaaat 34517500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 42894802 - 42894772
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  42894802 tttttcggatttttctgagaatatgaaaaat 42894772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 9847286 - 9847358
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||| |||| |||||||||||||||||||| |||| |||||  ||||||| || ||||||||| ||||    
T  9847286 aaaaaagggtgtaaatgatggaattttggattttga-gggcagagtcccgtaagaagtctcttctaaggaagtc 9847358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 12885271 - 12885347
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||| |||||| | | || |||||||| |||||||||||||||||  ||||||| |  |||||| |||||||    
T  12885271 atgaaaaatcggtctatatgttgaaattttgggttttgaggggcggagtcgcgtaagaagtttcttctacgggagtc 12885347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 45294010 - 45293938
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| ||| ||||||||| ||||||||||||||||||| | ||||    ||||| ||||||||| |||||||    
T  45294010 aaaattggtttaaacgatgaaattttggattttgaggggtgaagtccaacaagaagtcccttctaggggagtc 45293938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 42280346 - 42280528
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||| ||  |||| |||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  42280346 attacttttcccatcctatggccttctcccgcgccctgtaaaatttccaaaaatgcccttgtgtattccggattttaaaatccggattcttgtttactat 42280445  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || | ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  42280446 tttggattttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 42280528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 40995379 - 40995190
Alignment:
Q  25 tatgacaattacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgt 122  Q
    |||||| ||||||||||||||||||||| ||||||||| |  |||||||| ||| |||| |||| || |||||||| |||||||||||||  ||||||||    
T  40995379 tatgactattacttttcccatcctatggccttctcccgcgtcctgtaaaattttcaaaaatgcccttatgcattcctgattttaaaatccgaattcatgt 40995280  T
Q  123 ttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  40995279 ttactatttcggattttataattcggacaattcttatgtgtaatcagccatcagactctctcacatttcagcaattttgagttttgcttt 40995190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 9074243 - 9074061
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| | ||||| ||||||||| |  |||||||| ||| |||| || | |||||||||  |||||||||||||| ||||||||||||||||    
T  9074243 attacttttcccaccatatggccttctcccgcgtcctgtaaaattttcaaaaatgtccttgtgcattttggattttaaaatccggattcatgtttactat 9074144  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| |||||| |||||||||    
T  9074143 ttcggattttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgaattttgcttt 9074061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 8884935 - 8885079
Alignment:
Q  68 taaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatc 167  Q
    ||||| ||| |||| |||| ||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8884935 taaaattttcaaaaatgcccttgtgcagtctggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttatgtataatc 8885034  T
Q  168 aaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |   |||||||||||||||||||||||| ||||||||||||||||    
T  8885035 agccatcagactctctcacatttcagcagttttgagttttgcttt 8885079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 11697764 - 11697946
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| |||||| |||| ||||| ||| ||  ||||||  ||| | || |||| |||||||||| |||||||||||||| ||||||||||||||||    
T  11697764 attactttttccatcccatggccttcttccgcgccctgtaaatttttcataaatgcccttgtgcattctggattttaaaatccggattcatgtttactat 11697863  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| ||||| ||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  11697864 ttcggattttataatccggacagttcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 11697946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 44106894 - 44106747
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  44106894 ctgtaaaatttccaaaaatgcccttgtgtattccggattttaaaatccagattcatgtttactatttcggattttataatccggacaattcttatgtata 44106795  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   ||||||| ||||||||||| |||| ||||||||||||||||    
T  44106794 atcagtcatcagacactctcacattttagcagttttgagttttgcttt 44106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 27927391 - 27927579
Alignment:
Q  26 atgacaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtt 123  Q
    ||||| ||||||||||||| ||||||| |||||| || ||  ||||||| ||  |||| | || ||||||||||||||||||||||||  ||||||||||    
T  27927391 atgactattacttttcccaccctatggccttctctcgcgcactgtaaaatttccaaaaatacccttgtgcattccggattttaaaatctggattcatgtt 27927490  T
Q  124 tactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||  |||||||||||  |||||||||||||||||||||   |||||||||||||||||||||| | ||||||||||||||||    
T  27927491 tactatttcagattttataatccagacaattcttatgtataatcagcaatcagactctctcacatttcagaagttttgagttttgcttt 27927579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 28917498 - 28917311
Alignment:
Q  27 tgacaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt 124  Q
    ||||||||||||||| || ||||||  ||||| ||| ||  ||||||| ||| |||| ||| ||||||||||||||| |||||||| |||||||||||||    
T  28917498 tgacaattacttttctcaccctatgaccttcttccgcgccctgtaaaattttcaaaaatgcatttgtgcattccggaatttaaaattcagattcatgttt 28917399  T
Q  125 actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||| | |||||||||||   ||||||||||||||||||||   |||||||||||||| ||||||||| ||||||||||||||||    
T  28917398 actattttggattttataatccaaacaattcttatgtataatcagtcatcagactctctcaaatttcagcagttttgagttttgcttt 28917311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 31 - 212
Target Start/End: Original strand, 14163492 - 14163677
Alignment:
Q  31 aattacttttcccatcctat--ggtcttctcccgtgct--gtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttac 126  Q
    |||||||||||||| |||||  |  ||||||||||||   |||||| ||  |||| || |||||| |||||||||||||||||||| |||||||||||||    
T  14163492 aattacttttcccaccctatatgaccttctcccgtgccccgtaaaatttcaaaaaatgtctttgtccattccggattttaaaatccggattcatgtttac 14163591  T
Q  127 tatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||  |||||||||||||||||||| |   |||||||||||||||||||||||| |||||| |||||||||    
T  14163592 tatttcgaattttataattcggacaattcttatgtataattagccatcagactctctcacatttcagcagttttgaattttgcttt 14163677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 11698784 - 11698602
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||  ||||||||||||| ||||||  ||||||  ||| | || |||| |||| |||||||||||||||||| | ||||||||||||||||    
T  11698784 attacttttccctacctatggtcttcttccgtgccctgtaaagttttcataaatgcccttgtacattccggattttaaaattcggattcatgtttactat 11698685  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| ||| | ||||||||||||||||   |||||||| |||| |||||||||| ||||||||||||||||    
T  11698684 ttcggattttataatccggatagttcttatgtataatcagccatcagactatctcgcatttcagcaattttgagttttgcttt 11698602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 34854030 - 34853861
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||| ||  ||||||| ||| | || |||| |||||||||||| |||||||||||| |||||| |||||||||    
T  34854030 attacttttcccaccctatggccttctcccgcgccctgtaaaattttcagaaatgcccttgtgcattccgaattttaaaatccggattcacgtttactat 34853931  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttg 201  Q
    || | ||||||||||| ||||||||||||||||||| ||   |||||||  ||||||||||||||| |||||    
T  34853930 tttggattttataatccggacaattcttatgtataaccagccatcagac--tctcacatttcagcagttttg 34853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 3095326 - 3095221
Alignment:
Q  107 aaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttt 206  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||| | || ||||||||||    
T  3095326 aaatccggattcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagactctctcacattttaacagttttgagttt 3095227  T
Q  207 tgcttt 212  Q
    ||||||    
T  3095226 tgcttt 3095221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 21594461 - 21594312
Alignment:
Q  64 gctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgta 162  Q
    ||||||||| ||| |||| |||| ||||||| | |||||||||||||||  |||||||||| ||||||||| ||||||||||| | | |||||||| |||    
T  21594461 gctgtaaaattttcaaaaatgcccttgtgcaattcggattttaaaatccgaattcatgtttcactatttcggattttataatccgaaaaattcttacgta 21594362  T
Q  163 taatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  21594361 taatcagcaatcaaactctctcacatttcagcagttttgagttttgcttt 21594312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 34854414 - 34854245
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||| | ||||||| ||||||||| ||  ||||||| ||| | || |||| |||||||||||| |||||||||| | ||||||||||||||||    
T  34854414 attacttttcctaccctatggccttctcccgcgccctgtaaaattttcagaaatgcccttgtgcattccgaattttaaaattcggattcatgtttactat 34854315  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttg 201  Q
    || | ||||||||||| ||||||||||||||||||||||   |||| |  |||||||||||||||| |||||    
T  34854314 tttggattttataatccggacaattcttatgtataatcagtcatcaaa--ctctcacatttcagcagttttg 34854245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 21004941 - 21004849
Alignment:
Q  120 tgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||| ||||    
T  21004941 tgtttactatttcgaattttataatccggacaattcttatgtataatcaaccatcagaatctctcacatttcagcagttttgagttttacttt 21004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 8885226 - 8885309
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  8885226 atgaaaaatgggtctaaatgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctacgggagtcatggtcc 8885309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 42280668 - 42280740
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  42280668 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctaggggagt 42280740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 31519398 - 31519515
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||||| ||||||||||  |||||||||||||  |||||||   ||| || ||||||||||||||||    
T  31519398 ttccggatttcataatccggaatcatgtttactatttcggattttataattcggacaattcttataaataatcagccatctgaatctctcacatttcagc 31519497  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  31519498 agttttgagttttgcttt 31519515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 11698093 - 11698173
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||| ||||||||| ||||    
T  11698093 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagacgtcccttctatgggagtcatggtcc 11698173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 7981897 - 7981825
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||    
T  7981897 aaaatgagtctaaacgatggaattttggattttgaggggcgaagtcctataacaaatcccttctaagggagtc 7981825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 17119384 - 17119496
Alignment:
Q  98 cggattttaaaatccagattcatgttta-ctatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcat 196  Q
    |||||||||||||||  ||||||||||  |||||||| ||||||||||  | ||||||| ||||||||||||   |||||||||||||||||||| |||     
T  17119384 cggattttaaaatccgaattcatgtttctctatttcggattttataattcgaacaattcatatgtataatcagccatcagactctctcacatttctgcaa 17119483  T
Q  197 ttttgagttttgc 209  Q
    |||||||||||||    
T  17119484 ttttgagttttgc 17119496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 40995054 - 40994980
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||  |||| |||||||||||| ||||||    
T  40995054 tgaaaaatgtgtctaaacgatggaattttggattttgagaggcggagtcccgtaataaatcccttctacgggagt 40994980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 432
Target Start/End: Complemental strand, 28917158 - 28917077
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||   |||||| | ||||||||||||||||| ||||    
T  28917158 gaaaaatgagtctaaacaatggaattttggattttgaggggcggagtcccataagaagttccttctaagggagtcatggtcc 28917077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 36980950 - 36980878
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||| |||||||| ||||||||| |||||||    
T  36980950 aaaatgggtctaaacgatgggattttgaattttgaggagcggagtcctgtaagaagtcccttctaggggagtc 36980878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 3095069 - 3094987
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||| | ||||| ||| ||||||||| ||||    
T  3095069 tgaaaaatgggtctaaacgatgaaattttggattttgaggggtggagtcgcgtaagtagtccctcctatgggagtcatggtcc 3094987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 432
Target Start/End: Complemental strand, 34853742 - 34853630
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-------gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaag 419  Q
    |||||| ||||||||||||||||||||||||       |||||||||||||||||||||  ||||||||||||||||||    ||||| ||| |||||||    
T  34853742 tttttcagatttttctgagaatatgaaaaattaaaaatgggtctaaacgatggaattttttattttgaggggcggagtcccagaagaagtcctttctaag 34853643  T
Q  420 ggagtcatagtcc 432  Q
    |||||||| ||||    
T  34853642 ggagtcatggtcc 34853630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 31519668 - 31519749
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||||  ||||||  ||||||||||||| ||||| ||||    
T  31519668 atgaaaaatgggtctaaacaatggaattttggattttgaggg--ggagtcccgtaagacgtcccttctaagggtgtcatggtcc 31519749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 32504095 - 32504159
Alignment:
Q  334 gatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||| ||||||    
T  32504095 gatttttctgagaatatgaaaaatgggtttcaacaatgaaattttggattttgaggggtggagtc 32504159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 31234598 - 31234672
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagt--cttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||  |  ||||||| |||||||||||||||||    
T  31234598 aaaaaggggtctaaacgatggaattttggattttga-gggcggagtcccgcgtaagaagtcccttctaagggagtc 31234672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 33472358 - 33472286
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||| |||||||||||||| ||||||| ||||||||||||| ||||  ||||||| || ||||||||||||||    
T  33472358 aaaaagggtctaaacgatgaaattttgaattttgaggggcgtagtcccgtaagaagtctcttctaagggagtc 33472286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 4259459 - 4259514
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||    
T  4259459 aaaaatgggtctaaaggatagaattttggattttgaggggcggagtcccgtaagaa 4259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 10840527 - 10840605
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||||| ||||| |||||| ||||||||||| ||||||  |||||||   ||||||| |||||||||    
T  10840527 atgaaaaatgggtctaaaagatgggattttgaattttgaggggtggagtcccgtaagaatatccttctacgggagtcat 10840605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 10833386 - 10833458
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||| ||||||||| |||||||||||||||  ||||||||| ||||| || |||||||||||||||||    
T  10833386 aaaaaagggtgtaaacgatgaaattttggattttga-tggcggagtcctgtaaaaagtcccttctaagggagtc 10833458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 24627861 - 24627789
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| ||||||||| ||| |||||||||||||||| |||||||||  |||||||| || ||||||||||||||    
T  24627861 aaaaaagggtctaaatgatagaattttggattttga-gggcggagttctgtaagaagtctcttctaagggagtc 24627789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 24628070 - 24627998
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| ||| ||||| ||| ||||||||||||||||||| |||||||| ||||||| || ||||||||||||||    
T  24628070 aaaaaagggcctaaatgatagaattttggattttgaggg-cggagtctcgtaagaagtctcttctaagggagtc 24627998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 36318181 - 36318105
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||| |||||||||||||||||||  ||||||||||| |||||||  |||||| ||  |||||||| ||||    
T  36318181 atgaaaaatgagtctaaacgatggaattttaaattttgaggggtggagtctcataagaagtcatttctaaggtagtc 36318105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 27927727 - 27927782
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||  |||||||    
T  27927727 aaaaatgggtctaaacgatgaaattttggatttggaggggtggagtcccgtaagaa 27927782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 4259236 - 4259314
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcaca-tttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| || || |||||||||||||||  |||||| | ||||||| |||||||| |||||| |||||||||    
T  4259236 attttataatctgaactatgcttatgtataatcaacaatcagaatatctcacattttcagcagttttgaattttgcttt 4259314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 9073901 - 9073855
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||    
T  9073901 aaaaatggttctaaacgatagaattttggattttgaggggctgagtc 9073855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 14163831 - 14163889
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||| |||||||| |||||||||||  ||||||||||||||||||  |||||||    
T  14163831 atgaaaaataggtctaaatgatggaattttttattttgaggggcggagtcccgtaagaa 14163889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 36407249 - 36407331
Alignment:
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||   |  || ||||||||||||||   |||||| |||||| ||||||||||||||||| |||||||||    
T  36407249 ttcgaattttataatcctaaatatgcttatgtataatcagcaatcagaatctctcccatttcagcatttttgaattttgcttt 36407331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 6395466 - 6395401
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||| |||||||| ||| ||||||||||||||||||||| | |||  |||||||||| ||||||    
T  6395466 aaaaataggtctaaatgattgaattttggattttgaggggcagcgtcacgtaagaaatctcttcta 6395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 10840314 - 10840371
Alignment:
Q  155 cttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||  |||||| ||||||||||||||||| |||||| |||| ||||    
T  10840314 cttatgtataatcaacaatcagagtctctcacatttcagcagttttgaattttccttt 10840371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 11698482 - 11698445
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttg 386  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11698482 atgaaaaatgggtctaaacgatggaatttttgattttg 11698445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 17119655 - 17119696
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgagggg 391  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  17119655 tgaaagatgggtctaaacgatgaaattttggattttgagggg 17119696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 40328281 - 40328225
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||||||  |||||||    
T  40328281 tgaaaaatgggacttaacgatggaattt-ggattttgaggggcggagtcccgtaagaa 40328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 27234597 - 27234661
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccct 413  Q
    |||||||||||||||||| |||| ||||||| |||||||| |||  ||||||||| ||| |||||    
T  27234597 atgaaaaatgggtctaaatgatgaaattttgaattttgagtggcaaagtcttgtaggaagtccct 27234661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 28219004 - 28219047
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggc 392  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  28219004 atgaaaaataggtctaaacgataaaattttggattttgaggggc 28219047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 44106642 - 44106611
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatg 358  Q
    ||||||||||||||||||||||||||||||||    
T  44106642 tttttcggatttttctgagaatatgaaaaatg 44106611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 40328475 - 40328437
Alignment:
Q  174 cagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  40328475 cagactctctcacatttcagcagttttaagttttgcttt 40328437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 41530963 - 41530891
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| || ||||||  ||| |||||||||||||||||| |||||||  ||||||| || ||||||||||||||    
T  41530963 aaaaaaggatctaaataatgcaattttggattttgaggg-cggagtcccgtaagaagtctcttctaagggagtc 41530891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 3095113 - 3095085
Alignment:
Q  328 ttttcggatttttctgagaatatgaaaaa 356  Q
    |||||||||||||||||||||||||||||    
T  3095113 ttttcggatttttctgagaatatgaaaaa 3095085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 36980991 - 36980963
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  36980991 tttcggatttttctgagaatatgaaaaat 36980963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 47739383 - 47739565
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgct--gtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||||||||||||| |||  |||||| ||| |||| |||| ||||||||||||||||||||||||   |||||||| ||||||    
T  47739383 attacttttcccaccctatggtcttctcccgcgctctgtaaaattttcaaaaatgcccttgtgcattccggattttaaaatctgaattcatgtctactat 47739482  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || | ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  47739483 tttggattttataatccggacaattcttatgtataatcagcaatcagactctctcacatttcagcagttttgagttttgcttt 47739565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 33439890 - 33439706
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgct--gtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||| ||| ||   |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  33439890 attacttttcccaccctatggccttcttccgcgcctagtaaaattttcaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactat 33439791  T
Q  130 ttcgaattttataatctggacaattcttatg--tataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||||||||||||| ||||  |||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  33439790 ttcggattttataatctggacaattcatatgtatataatcaaccatcagactctctcacatttcagcagttttgagttttgcttt 33439706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 46622249 - 46622429
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||| ||  ||||||| ||| |||| ||||  |||||||||||||||||||||||| ||||||||||||||||    
T  46622249 attacttttcccaacctatggccttctcccgcgccctgtaaaattttcaaaaatgcccatgtgcattccggattttaaaatccggattcatgtttactat 46622348  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||  ||||||||||||||||||||||   ||||||  |||||||||||||||| ||||||||||||||||    
T  46622349 ttcggattttataattcggacaattcttatgtataatcagccatcaga--ctctcacatttcagcagttttgagttttgcttt 46622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 39150514 - 39150312
Alignment:
Q  8 aattgaatattaggacgtatgacaattacttttcccatcctatggtcttctcccgtgct--gtaaaaattttaaaattgcctttgtgcattccggatttt 105  Q
    ||||||||||||||||  |  |||||||||||| ||||||||| | ||||||  |||||  |||||| ||| ||||||||  | |||||||||| |||||    
T  39150514 aattgaatattaggac--aatacaattactttttccatcctatagccttctcttgtgctctgtaaaattttcaaaattgc--tcgtgcattccgaatttt 39150419  T
Q  106 aaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagtt 205  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||   |||||||||  ||||||||||||| |||||||||    
T  39150418 aaaatccggattcatgtttactattttggattttataatccggacaattcttatgtataatcatccatcagactccttcacatttcagcagttttgagtt 39150319  T
Q  206 ttgcttt 212  Q
    |||||||    
T  39150318 ttgcttt 39150312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 3351542 - 3351678
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3351542 ctgtaaaatttccaaaaatgcccttgtgcattctggattttaaaatccggattcatgtttactatttcggattttataatctggacaattcttatgtata 3351641  T
Q  165 atcaaatatcagactctctcacatttcagcatttttg 201  Q
    |||||  |||||||||||||||| ||||||| |||||    
T  3351642 atcaaccatcagactctctcacaattcagcagttttg 3351678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 3902254 - 3902432
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgctgtaaaaatttt--aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||| ||  |  || ||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  3902254 attacttttcccaccctatggccttctcccgcgccctgtaatttttcaaaaaatgcccttgtgcattccggattttaaaatccagattcatgtttactat 3902353  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttg 208  Q
    |||| ||||||||||| | ||||||||||||||||||||   |||||||||||||| |||| | || ||||||||||||    
T  3902354 ttcggattttataatccgaacaattcttatgtataatcagccatcagactctctcaaattttaacagttttgagttttg 3902432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 35142789 - 35142610
Alignment:
Q  33 ttacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatt 130  Q
    |||||||||||| ||||||| ||||||||| ||  ||||||| ||| ||||||| | ||||||||||| |||||||||||||| ||||||||||||||||    
T  35142789 ttacttttcccaccctatggccttctcccgcgccctgtaaaattttcaaaattgtccttgtgcattcctgattttaaaatccatattcatgtttactatt 35142690  T
Q  131 tcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||| ||||||||||  |||||||||||||| |||||||   |||||||  ||||||||||||||| |||||| |||||||||    
T  35142689 tcggattttataattcggacaattcttatgcataatcagccatcagac--tctcacatttcagcagttttgaattttgcttt 35142610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 50716963 - 50716781
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| ||| ||||||| ||||||||| ||  |||||   ||| |||| |||| |||||||||  |||||||||||||| | ||||||||||||||    
T  50716963 attactttttccaccctatggccttctcccgcgccctgtaattttttcaaaaatgcccttgtgcattttggattttaaaatccggcttcatgtttactat 50716864  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| | || |||| |||||||||||    
T  50716863 ttcggattttataatccggacaattcttatgtataatcaaccatcagactctctcacattttaacagttttaagttttgcttt 50716781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 50795884 - 50796066
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| ||| ||||||| ||||||||| ||  |||||   ||| |||| |||| |||||||||  |||||||||||||| | ||||||||||||||    
T  50795884 attactttttccaccctatggccttctcccgcgccctgtaattttttcaaaaatgcccttgtgcattttggattttaaaatccggcttcatgtttactat 50795983  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| | || |||| |||||||||||    
T  50795984 ttcggattttataatccggacaattcttatgtataatcaaccatcagactctctcacattttaacagttttaagttttgcttt 50796066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 49095657 - 49095838
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| |||||||||  |  ||||||| ||  |||| |||| |||| || | | ||||||||||||| ||||||||||||| ||    
T  49095657 attacttttcccaccctatggccttctcccgcaccctgtaaaatttccaaaaatgcccttgt-cagttcagattttaaaatccggattcatgtttaccat 49095755  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||| |||| ||||||||||||||||    
T  49095756 ttcagattttataatccggacaattcttatgtataatcagtcatcagactctctcacatttaagcagttttgagttttgcttt 49095838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 2358125 - 2358242
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||||    
T  2358125 ttccggatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagc 2358224  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  2358225 agttttgagttttgcttt 2358242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 38977244 - 38977374
Alignment:
Q  80 aattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagact 179  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||  |||  ||     
T  38977244 aattgcccttgtgcattccggattttaaaatccggattcatgtttaatattttggattttataatccggacaattcttatgtataatcaaccatc--aca 38977341  T
Q  180 ctctcacatttcagcatttttgagttttgcttt 212  Q
    || || |||||||||| ||||||||||||||||    
T  38977342 ctttcgcatttcagcagttttgagttttgcttt 38977374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 41301558 - 41301434
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    |||||||||||  |||||||||| | |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||   ||||||||||||||||    
T  41301558 ttgtgcattccaaattttaaaattcggattcatgtttactatttcagattttataatccggacaattcttatgtataatcatccatcagactctctcaca 41301459  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
     |||| || ||||||||||||||||    
T  41301458 attcaacagttttgagttttgcttt 41301434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 500693 - 500807
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||| |||||||| | || |    
T  500693 cggattttaaaatccggattgatgtttactatttcggattttataatctggacaattcttatgtataatcagccatcagactctatcacattttaacagt 500792  T
Q  198 tttgagttttgcttt 212  Q
    ||| |||||||||||    
T  500793 tttaagttttgcttt 500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 26053262 - 26053366
Alignment:
Q  108 aatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||   |||||||||| |||||||||| || |||||||||||    
T  26053262 aatccggattcatgtttactatttcgaattttataatccggacaattcttatttataatcagtcatcagactctatcacatttcaacagttttgagtttt 26053361  T
Q  208 gcttt 212  Q
    |||||    
T  26053362 gcttt 26053366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 47131018 - 47130871
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||  ||| |||| |||| ||||| ||| || |||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  47131018 ctgtaaagttttcaaaaatgcccttgtgaatttcgaattttaaaatccggattcatgtttactatttcggattttataatccagacaattcttatgtata 47130919  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||    || ||||| |||||||||||||| ||||||||||| ||||    
T  47130918 atcagtcttcggactccctcacatttcagcagttttgagtttttcttt 47130871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 52777882 - 52777792
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatca 168  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  52777882 aaaaatgcccttgtgcagtccggattttaaaatccagattcatgtttactatttcggattttataattcggacaattcttatgtataatca 52777792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 39150209 - 39150146
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39150209 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggg 39150146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 3938834 - 3938728
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||||    
T  3938834 ttccggatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagc 3938735  T
Q  195 atttttg 201  Q
    | |||||    
T  3938734 agttttg 3938728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 46622547 - 46622629
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaat 409  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  46622547 tttttcagatttttctaagaatatgaaaaatgggtctaaacgatggaattttggattctgaggggcggagtcccgtaagaaat 46622629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 8657772 - 8657655
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | ||||| || ||||||||||||||| | ||||||||||| |||||||||| |||||||||||   |||||| ||||||||||||||||    
T  8657772 ttccggatttcataatccggaatcatgtttactattttggattttataatccggacaattctcatgtataatcagccatcagaatctctcacatttcagc 8657673  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||| ||||    
T  8657672 agttttgagttttacttt 8657655  T

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Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 3902551 - 3902663
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-------gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaag 419  Q
    |||||||||||||||||||||||||||||||       || |||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||    
T  3902551 tttttcggatttttctgagaatatgaaaaattaaaaatggatctaaacgattgaattttggattttgaggggcggagtcccgtaagaaattccttctaag 3902650  T
Q  420 ggagtcatagtcc 432  Q
    || ||||| ||||    
T  3902651 ggtgtcatggtcc 3902663  T

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Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 54588226 - 54588326
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| |||||||| |||  |||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||  || ||||||||||||||    
T  54588226 ctgtaaaatttttaaaaatgctattgtgcattttggattttaaaatccggattcatgtttactatttcggattttataatccagaaaattcttatgtata 54588325  T
Q  165 a 165  Q
    |    
T  54588326 a 54588326  T

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Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 34821117 - 34821200
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||| | ||||||| ||||    
T  34821117 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggactcccgtaagaagtcccttctatgagagtcatggtcc 34821200  T

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Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 35142458 - 35142375
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||| ||||||||| ||||||||| ||||    
T  35142458 atgaaaaatgggtctaaacgatggaattttggatttttaggggcggagccccgtaagaagtcccttctacgggagtcatggtcc 35142375  T

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Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 47302629 - 47302534
Alignment:
Q  117 tcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||   ||| || ||||||| |||||| || ||||||||||||||||    
T  47302629 tcatgtttactatttcgaattttataatccggacaattcttatatataatcagtcatcggaatctctcatatttcaacagttttgagttttgcttt 47302534  T

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Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 28873391 - 28873313
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| || |||||| |||||||||    
T  28873391 atgaaaaatggatctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagtcat 28873313  T

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Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 41485818 - 41485921
Alignment:
Q  108 aatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttt 206  Q
    ||||| ||||||||||| || |||||| ||||||||||| ||||||||||||| |||||||||  ||||||  |||||||||||||||| ||||||||||    
T  41485818 aatccggattcatgtttcacaatttcggattttataatccggacaattcttatatataatcaaccatcaga--ctctcacatttcagcagttttgagttt 41485915  T
Q  207 tgcttt 212  Q
    ||||||    
T  41485916 tgcttt 41485921  T

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Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 47302404 - 47302326
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||| ||||||||| |||||||||    
T  47302404 atgaaaaatgggtctaaacaatggaattttggattttgaggggcagagtcccgtaagaagtcccttctatgggagtcat 47302326  T

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Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 51258785 - 51258711
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  51258785 aaaatgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctacgggagtcat 51258711  T

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Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 2358396 - 2358479
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||  ||||||| ||||||||| ||||||||| ||||    
T  2358396 atgaaaaatgggtctaaacaatggaattttagattttgaggggcgtagtcccgtaagaagtcccttctaggggagtcatggtcc 2358479  T

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Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 432
Target Start/End: Complemental strand, 3938565 - 3938484
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||| ||| |||||  |||||||||||||||||||||||||||| | |||| |||||||||||| ||||    
T  3938565 gaaaaatgggtctaaacaatgaaatttaagattttgaggggcggagtcttgtaagaagttccttataagggagtcatggtcc 3938484  T

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Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 353 - 425
Target Start/End: Complemental strand, 29048711 - 29048639
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||| ||||| |||||||    
T  29048711 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaataagtcctttctacgggagtc 29048639  T

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Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 500963 - 501034
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggag 423  Q
    |||||| |||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||| |||||    
T  500963 aaaaattggtctaaacgatggaattttggattttgaggggcggagtgccgtaagaagtcccttctatgggag 501034  T

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Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 4394364 - 4394281
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||  |||| || | ||||||| ||||||||| ||||    
T  4394364 atgaaaaaagggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtcc 4394281  T

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Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 51816621 - 51816531
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| || |||| |||||||||||| |||||  ||||||| ||| |||||    
T  51816621 tttttcggatttttcttagaacatgaaaaatggatctaaacgatgaaaatttgaattttgaggggcagagtcccgtaagaagtccattcta 51816531  T

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Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 45244678 - 45244606
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||    
T  45244678 aaaaaagggtctaaatgatggaattttggattttga-gggcggagtctcgtaagaagtcctttctaagggagtc 45244606  T

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Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 14828690 - 14828758
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||| || ||||||    
T  14828690 atgaaaaataggtctaaacgatggaattttggattttgaaaggcggagtcctgtaagaagtctcttcta 14828758  T

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Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 35345683 - 35345751
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||  || |||| |||||||||    
T  35345683 atgaaaaatgggtttaaacggtggaattttggattttgaggggcggagtcccgttagaagtcccttcta 35345751  T

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Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 51540404 - 51540484
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||   | |||| ||||||||||||||||||| ||||    
T  51540404 aaaaatgggtctaaacgatggagttttggattttgaggggcagaatcccatgagaagtcccttctaagggagtcatggtcc 51540484  T

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Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 432
Target Start/End: Original strand, 3351852 - 3351923
Alignment:
Q  361 tctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||| |||||||||||||||||||   |||||| ||||||||| ||||||||| ||||    
T  3351852 tctaaacgatggaattttagattttgaggggcggagtcccataagaagtcccttctacgggagtcattgtcc 3351923  T

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Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 33439569 - 33439494
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||   |||| || |||||| || |||||||||    
T  33439569 aaaaatgggtctaaacgatggaattttggattttgtggggcggagttccgtaacaagtcccttttatgggagtcat 33439494  T

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Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 50716638 - 50716555
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| ||  ||||||| || ||||||  |||||||| ||||    
T  50716638 atgaaaaataggtctaaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtcc 50716555  T

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Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 50796209 - 50796292
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| ||  ||||||| || ||||||  |||||||| ||||    
T  50796209 atgaaaaataggtctaaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtcc 50796292  T

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Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 390
Target Start/End: Complemental strand, 21481453 - 21481395
Alignment:
Q  332 cggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  21481453 cggatttttcagagaatatgaaaaattggtctaaacaatggaattttggattttaaggg 21481395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 43471466 - 43471524
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||    
T  43471466 ggtctaaacgatgaaattttggattttgaggggtggagtcttgtaagaagttccttcta 43471524  T

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Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 30721611 - 30721655
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggag 396  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  30721611 aaaaatgggtctaaacgatgaaattttggattttgaggggcggag 30721655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 34009868 - 34009936
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||||||  ||||||| |||||||||    
T  34009868 atgaaaaatgagtataaatgatggaattttggattttggggggcggagtcacgtaagaagtcccttcta 34009936  T

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Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 51540200 - 51540256
Alignment:
Q  156 ttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  51540200 ttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 51540256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 43472762 - 43472825
Alignment:
Q  369 atggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||  |||||||| ||||    
T  43472762 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtcc 43472825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 38977521 - 38977599
Alignment:
Q  349 atgaaaaatgggtctaaa-cgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||    ||||| ||||||||| ||||||||    
T  38977521 atgaaaaatgggtttaaaacgatgaaattttggattttgaggggcggagtcccacaagaagtcccttctacgggagtca 38977599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 41300995 - 41300937
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||  |||||||    
T  41300995 atgaaaaataggtctaaacgatggaatttttgattttgatgggcggagtcccgtaagaa 41300937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 49095995 - 49096040
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||    
T  49095995 aaaatgggtcttaacgatggaattttggattttgagggacggagtc 49096040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 47739679 - 47739756
Alignment:
Q  327 tttttcggatttttctgagaatatg-------aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||||||||       |||||||||||||||| | ||||||||| ||||||||||||||||||    
T  47739679 tttttcggatttttctgagaatatgaaaaattaaaaatgggtctaaac-acggaattttgaattttgaggggcggagtc 47739756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 4394609 - 4394555
Alignment:
Q  67 gtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatg 121  Q
    |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||||||    
T  4394609 gtaaaattttcaaaaatgcccttgtgcattccggattttaaaatccggattcatg 4394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 29036186 - 29036140
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||    
T  29036186 aaaaatgggtctaaacgatgaaattttagattttgaggggcagagtc 29036140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 51493428 - 51493330
Alignment:
Q  115 attcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||| |||| |||| ||||||||||| | || || ||||||||||||||   |||||  |||||||||||| |||| |||||| |||||||||    
T  51493428 attcatgtttcactaattcggattttataatccgaactatgcttatgtataatcatcaatcaggatctctcacattttagcagttttgaattttgcttt 51493330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 28873614 - 28873537
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||| |||| |||||||| ||||||||| ||    ||||||||||||||||||| | || ||||||||||||||||    
T  28873614 attttaaaatccggacaatttttatgtatagtcggtcatcagactctctcacattttaacagttttgagttttgcttt 28873537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 43419905 - 43419942
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgag 388  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  43419905 gaaaaatgggtataaacgatggaattttggattttgag 43419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 47123369 - 47123328
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  47123369 atgaaaaatgggtcaaaacgatgaaattttggattttgaggg 47123328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 47130735 - 47130694
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  47130735 atgaaaaatgggtcaaaacgatgaaattttggattttgaggg 47130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 4300054 - 4300125
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||| ||| |||||||| ||||||||||||||| ||| |||||| |||||||| |||||| || ||||||    
T  4300054 aaaaatgcgtccaaacgatgaaattttggattttga-gggtggagtcctgtaagaagtcccttatatgggagt 4300125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 11266617 - 11266573
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  11266617 aaaatggatctaaacgatggaattttagattttgagggacggagt 11266573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 47769647 - 47769603
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcg 393  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  47769647 atgaaaaatgggtttaaacaatgaaattttggattttgaggggcg 47769603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 41486058 - 41486101
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggc 392  Q
    ||||||||||| ||||||||||||||||||| || |||||||||    
T  41486058 atgaaaaatggatctaaacgatggaattttgaatattgaggggc 41486101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 3351795 - 3351825
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  3351795 tttttcggatttttctgagaatatgaaaaat 3351825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 8657541 - 8657511
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  8657541 tttttcggatttttctgagaatatgaaaaat 8657511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 19419800 - 19419734
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaa 418  Q
    ||||| ||| |||||||| ||| ||||||||||||||||||||| || | |||||| || |||||||    
T  19419800 aaaaacgggcctaaacgaaggagttttggattttgaggggcggaatcctataagaagtctcttctaa 19419734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 35142497 - 35142467
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  35142497 tttttcggatttttctgagaatatgaaaaat 35142467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 47123408 - 47123378
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  47123408 tttttcggatttttctgagaatatgaaaaat 47123378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 47130774 - 47130744
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  47130774 tttttcggatttttctgagaatatgaaaaat 47130744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 49095952 - 49095982
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  49095952 tttttcggatttttctgagaatatgaaaaat 49095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 50716677 - 50716647
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  50716677 tttttcggatttttctgagaatatgaaaaat 50716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 50796170 - 50796200
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  50796170 tttttcggatttttctgagaatatgaaaaat 50796200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 51258829 - 51258799
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  51258829 tttttcggatttttctgagaatatgaaaaat 51258799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 35345645 - 35345674
Alignment:
Q  328 ttttcggatttttctgagaatatgaaaaat 357  Q
    ||||||||||||||||||||||||||||||    
T  35345645 ttttcggatttttctgagaatatgaaaaat 35345674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 45711886 - 45711935
Alignment:
Q  376 tttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||| |||||    
T  45711886 tttggattttgaggggtggagtcccgtaagaagtcccttctaagagagtc 45711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 8735476 - 8735402
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| |||||||||  ||| ||||||||||||||| |||||||||||  |||||| | |||||||||| ||||    
T  8735476 atgaaaaaagggtctaaat-atgaaattttggattttga-gggcggagtctcctaagaagttccttctaaggtagtc 8735402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 9087717 - 9087643
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| |||||||||  ||| ||||||||||||||| |||||||||||  |||||| | |||||||||| ||||    
T  9087717 atgaaaaaagggtctaaat-atgaaattttggattttga-gggcggagtctcctaagaagttccttctaaggtagtc 9087643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 14828491 - 14828547
Alignment:
Q  156 ttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||   |||||| |||||| |||||||||| |||||| |||||||||    
T  14828491 ttatgtataatcagcaatcagaatctctcccatttcagcagttttgaattttgcttt 14828547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 7423622 - 7423440
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| |||  |||||||||||||||| ||  | ||||| ||| |||| |||  | ||||||||||||||||||||||| ||||||||||||||||    
T  7423622 attactttttccactctatggtcttctcccgcgccctataaaattttcaaaaatgctctagtgcattccggattttaaaatccggattcatgtttactat 7423523  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||    
T  7423522 ttcggattttataatccggacaattcttatgtataatcaaccatcagactctctcacatttcaacagttttgagttttgcttt 7423440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 2540167 - 2539983
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||| ||  ||||||| ||| |||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  2540167 attacttttcccaccctatggccttctcccgcgccctgtaaaattttcaaaaatgtctttgtgcattccggattttaaaatccggattcatgtttactat 2540068  T
Q  130 ttcgaattttataatctggacaattctta--tgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| ||||||||||||  ||||||||||   || | ||||||||||||||||||| ||||||||||||||||    
T  2540067 ttcggattttataatccggacaattcttatgtgtataatcatccattacactctctcacatttcagcagttttgagttttgcttt 2539983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 17265077 - 17264955
Alignment:
Q  86 ctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctca 185  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  17265077 ctttgtgcattccggattttaaaatccagattcatgtttaatatttcggattttataatccggacaattcttatgtataatcagccatcagactctctca 17264978  T
Q  186 catttcagcatttttgagttttg 208  Q
    |||||||||| ||||||||||||    
T  17264977 catttcagcagttttgagttttg 17264955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 78 - 208
Target Start/End: Original strand, 4507798 - 4507926
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  4507798 aaaaatgcccttgtgtattccggattttaaaatccggattcatgtttactatttcgaattttataatccggacaattcttatgtataatcagccatcaga 4507897  T
Q  178 ctctctcacatttcagcatttttgagttttg 208  Q
      |||||||||||||||| ||||||||||||    
T  4507898 --ctctcacatttcagcaattttgagttttg 4507926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 7416497 - 7416315
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| ||| | ||||||||||||||| |  || ||||| ||| |||| || | ||||| ||||||||| |||| |||| ||||||||||||||||    
T  7416497 attactttttccaccttatggtcttctcccgcgtcctataaaattttcaaaaatgtccttgtgtattccggatgttaatatccggattcatgtttactat 7416398  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  ||||||||||| |||||||| |||||||||||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  7416397 ttcagattttataatccggacaatttttatgtataatcagccatcatactctctcacatttcagcagttttgagttttgcttt 7416315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 21514791 - 21514880
Alignment:
Q  335 atttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  21514791 atttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaagggagt 21514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 13096820 - 13096696
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||| | || |||||||||||| |||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||   ||||||||||||||||    
T  13096820 ttgtgcagttcgaattttaaaatccggattcatgtttactatttcagattttataatccggataattcttatgtataatcagccatcagactctctcaca 13096721  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    |||||||| ||||||||||||||||    
T  13096720 tttcagcagttttgagttttgcttt 13096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 2812732 - 2812844
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||   ||||||    
T  2812732 aaaaatgcccttgtgcatttcggattttaaaatccagattcatgtttactattacggattttattatccggacaattcttatgtataatcagtcatcaga 2812831  T
Q  178 ctctctcacattt 190  Q
    |||||||||||||    
T  2812832 ctctctcacattt 2812844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 3716797 - 3716921
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    |||| |||||| |||| |||||| |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||   |||||||||| |||||    
T  3716797 ttgtacattcctgattgtaaaattcagattcatgtttattatttcgaattttataattcggacaattcttatgtataatcagccatcagactctttcaca 3716896  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||| | || ||||||||||||||||    
T  3716897 ttttaacaattttgagttttgcttt 3716921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 5639746 - 5639633
Alignment:
Q  98 cggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatt 197  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||  |||||||| |||||||||||||   ||||||||||||||||||| |||| |    
T  5639746 cggattttaaaatcc-gattcacgtttactatttcggattttataattcggacaatttttatgtataatcagccatcagactctctcacatttgagcagt 5639648  T
Q  198 tttgagttttgcttt 212  Q
    |||||||||||||||    
T  5639647 tttgagttttgcttt 5639633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 212
Target Start/End: Complemental strand, 9905731 - 9905593
Alignment:
Q  75 tttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatat 173  Q
    ||||||| |||| | ||||| || |||||||||||||| ||||||||||| |||||||   ||||||||||| | ||||||||||||||||||||   ||    
T  9905731 tttaaaaatgccctggtgcaatctggattttaaaatccggattcatgtttcactattttcgattttataatccgaacaattcttatgtataatcagccat 9905632  T
Q  174 cagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  9905631 cagactctttcacatttcagcagttttgagttttgcttt 9905593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 14587001 - 14587187
Alignment:
Q  27 tgacaattacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt 124  Q
    |||| ||||||||||| |  |||||| ||||||||| |  |||||||| || ||||| || | || |||||||||||||||||||||| |||||||||||    
T  14587001 tgactattacttttccaactctatggccttctcccgcgtcctgtaaaatttctaaaaatgaccttatgcattccggattttaaaatccggattcatgttt 14587100  T
Q  125 actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |   ||||| ||||||||||  ||| ||||||||| ||||||||   |||||||||| ||||||||||||| |||||| |||||||||    
T  14587101 agattttcggattttataattcggaaaattcttat-tataatcagccatcagactctttcacatttcagcagttttgaattttgcttt 14587187  T

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Target: chr6; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 32044847 - 32044752
Alignment:
Q  117 tcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||| | ||||||||||||||||    
T  32044847 tcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagtagttttgagttttgcttt 32044752  T

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Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 5700259 - 5700135
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||| | |||||||| || |||||||||||||||| |||||   |||||||||||||| |    
T  5700259 ttgtgcattccgggttttaaaatccgaattcatgtttattattttggattttatagtccggacaattcttatgtacaatcagccatcagactctctcaaa 5700160  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||| | || ||||||||||||||||    
T  5700159 ttttaacagttttgagttttgcttt 5700135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 1945057 - 1945202
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||| |||| |||| ||||| | | |||||||||||||||  |||||| |||||||||||| ||||||||||  ||| ||||||||||||||    
T  1945057 ctgtaaaattttcaaaaatgcccttgtggagttcggattttaaaatccgaattcatttttactatttcggattttataattcggaaaattcttatgtata 1945156  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||   ||||||  |||||||||||| ||| |||||| |||||||||    
T  1945157 atcagtcatcaga--ctctcacatttcggcagttttgacttttgcttt 1945202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 237183 - 237110
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaaggga 422  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||    
T  237183 atgaaaaataggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagacccttctaaggga 237110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 29630716 - 29630781
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggc 392  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  29630716 ttttttggatttttctgagaatatgaaaaatgagtctaaacgatgaaattttggattttgaggggc 29630781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 2812996 - 2813079
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||   |||||| ||| ||||||||||||||| ||||    
T  2812996 atgaaaaatgggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagtccattctaagggagtcatggtcc 2813079  T

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Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 4508076 - 4508159
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| || |||||  ||||||||| ||||    
T  4508076 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccttaagaagtctcttctgtgggagtcatggtcc 4508159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 5639246 - 5639163
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||| || ||||||| |||||||| ||||    
T  5639246 atgaaaaatggatataaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaaaggagtcatggtcc 5639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 17264797 - 17264711
Alignment:
Q  346 aatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| || ||||  ||||||| ||||||||| ||||||||| ||||    
T  17264797 aatatgaaaaatggatctaaacgatgaaattttggattttgagggacgaagtcccgtaagaagtcccttctaggggagtcatggtcc 17264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 2539836 - 2539753
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||| || |||||| | ||||||| ||||    
T  2539836 atgaaaaatgagtctaaacgattgaattttggattttgaggggcggagtcccgtaagaagtcacttctatgagagtcatggtcc 2539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 3717056 - 3717139
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||| || |||||| ||||| ||| ||||    
T  3717056 atgaaaaatgggtctaaacagtggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagccatggtcc 3717139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 5699983 - 5699925
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  5699983 atgaaaaataggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaa 5699925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 9905448 - 9905390
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  9905448 atgaaaaataggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaa 9905390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 14587335 - 14587411
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||| || ||||| |||||||||||||||||||| |||||||||  ||||||| | |||||||||||||||    
T  14587335 atgaaaaatgagtttaaacaatggaattttggattttgagtggcggagtcccgtaagaagttccttctaagggagtc 14587411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 4655371 - 4655486
Alignment:
Q  98 cggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcat 196  Q
    |||||||||||||||  |||||| ||| |||| || ||||||||||||||| |  || ||||||||||||||  ||||||| ||||||  |||||||||     
T  4655371 cggattttaaaatccgaattcattttttactaatttgaattttataatctgaaatatgcttatgtataatcagctatcagaatctctcctatttcagcag 4655470  T
Q  197 ttttgagttttgcttt 212  Q
    |||||| |||||||||    
T  4655471 ttttgaattttgcttt 4655486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 24604138 - 24604213
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||   | ||||| |||||||||||||||||||    
T  24604138 aaaaaagggtctaaacggtggaattttggattttgagaggcggagttccgcaagaagtcccttctaagggagtcat 24604213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 33413200 - 33413263
Alignment:
Q  149 acaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  33413200 acaattcttatgtgtaatcagccatcagactctctcacatttcagcagttttgagttttgcttt 33413263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 7416171 - 7416125
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7416171 atgaaaaatgggtctaaacgattgaattttggattttgaggggcgga 7416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 1945359 - 1945414
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  1945359 aaaaaggggtctaaacgttggaattttggattttgaggggcggagtcccgtaagaa 1945414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 16450600 - 16450553
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtct 399  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16450600 aaaaataggtctaaacgatggaattttggattttgatgggcggagtct 16450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 7413152 - 7413106
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  7413152 atgaataatgggtctaaacgatgaaattttggattttgaggggcgga 7413106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23407346 - 23407276
Alignment:
Q  142 aatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||||||||||||||   |||||||||||||| |||| | || ||||||||||||||||    
T  23407346 aatccggacaattcttatgtataatcagccatcagactctctcatattttaacaattttgagttttgcttt 23407276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 24603910 - 24603991
Alignment:
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| |||| |||||| ||| |||||||||| ||||| |   |||||||||||||||||||||||| ||||||||||||||||    
T  24603910 ttcggatttcataatccggataattcttatg-ataattagccatcagactctctcacatttcagcagttttgagttttgcttt 24603991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 212
Target Start/End: Complemental strand, 29519911 - 29519813
Alignment:
Q  115 attcatgttt-actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||| |||| |||| ||| || |||| |||||||||||||||||||| |   ||||||| |||||| |||||| || ||||||||||||||||    
T  29519911 attcatgtttcactaattcggattctaaaatccggacaattcttatgtataataagtcatcagaccctctcatatttcaacagttttgagttttgcttt 29519813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 7423284 - 7423240
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcg 393  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  7423284 atgaaaaatgggtctaaacggttgaattttggattttgaggggcg 7423240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 3366042 - 3365976
Alignment:
Q  351 gaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||| |||||||||||| |||||| ||||||||| | |||||||| ||||||| || ||||||    
T  3366042 gaaaaatgagtctaaacgatgaaattttagattttgagcgacggagtctcgtaagaagtctcttcta 3365976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 29519661 - 29519611
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaa-ttttggattttgaggggcggagtc 398  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  29519661 atgaaaaatgggtctaaacgatggaatttttggattttgagaggaggagtc 29519611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 384
Target Start/End: Original strand, 29289469 - 29289501
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattt 384  Q
    |||||||||||||||||||||||||||||||||    
T  29289469 aaaaatgggtctaaacgatggaattttggattt 29289501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 2539875 - 2539845
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  2539875 tttttcggatttttctgagaatatgaaaaat 2539845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 394
Target Start/End: Original strand, 8120153 - 8120195
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcgg 394  Q
    |||||| |||||||| ||| |||||||||||||||||||||||    
T  8120153 aaaaataggtctaaatgatagaattttggattttgaggggcgg 8120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 17264838 - 17264808
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  17264838 tttttcggatttttctgagaatatgaaaaat 17264808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 29289257 - 29289327
Alignment:
Q  142 aatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||| |||||||||||| |   |||||||||||||| ||||||  | ||||||||||||||||    
T  29289257 aatccggacaatgcttatgtataataagccatcagactctctcatatttcattagttttgagttttgcttt 29289327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 29289430 - 29289460
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  29289430 tttttcggatttttctgagaatatgaaaaat 29289460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 13799107 - 13799164
Alignment:
Q  155 cttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||   |||||| ||||| ||||||||||| |||||| |||||||||    
T  13799107 cttatgtataatcagcaatcagaatctcttacatttcagcagttttgaattttgcttt 13799164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 17501369 - 17501297
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||| ||||||||| |||||||||||||||  |||||||||  |||| || |||||||||| ||||||    
T  17501369 aaaaaagggtgtaaacgatgaaattttggattttga-tggcggagtcccgtaaaaagtcccttctaaaggagtc 17501297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 14037542 - 14037598
Alignment:
Q  156 ttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||   |||||| ||||||| ||||||||| |||||| |||||||||    
T  14037542 ttatgtataatcagcaatcagaatctctcatatttcagcagttttgaattttgcttt 14037598  T

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Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 31928571 - 31928753
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||| ||||||||||| ||||||||| ||  ||||||| || |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||    
T  31928571 attactttttccatcctatggccttctcccgcgccctgtaaaatttctaaaattgctcttgtgcatttcggattttaaaatccggattcatgtttactat 31928670  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || | ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||||| |||||| |||||||||    
T  31928671 ttaggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagcagttttgaattttgcttt 31928753  T

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Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 38692239 - 38692421
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| | ||||| ||||||||| ||  ||||||| ||| |||| || | ||||||||||||||||||||||||  ||||||||||||||||    
T  38692239 attacttttcccaccatatggccttctcccgcgccctgtaaaattttcaaaaatgtccttgtgcattccggattttaaaatctggattcatgtttactat 38692338  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  ||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  38692339 ttcagattttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 38692421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 37183226 - 37183415
Alignment:
Q  25 tatgacaattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgt 122  Q
    |||||| ||||||||| ||| ||||||  ||||||||| ||  ||||||| ||| |||| |||| |||||||||||||||||| |||||| |||||||||    
T  37183226 tatgactattactttttccaccctatgaccttctcccgcgccctgtaaaattttcaaaaatgccattgtgcattccggattttcaaatccggattcatgt 37183325  T
Q  123 ttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||   |||| ||||||||||||||||| | ||||||||||||||||    
T  37183326 ttactatttcggattttataatccggacaattcttatgtataatcagccatcaaactctctcacatttcagtagttttgagttttgcttt 37183415  T

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Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 31 - 212
Target Start/End: Complemental strand, 38872334 - 38872151
Alignment:
Q  31 aattacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttacta 128  Q
    |||||||||||||| | ||||| ||||||||| ||  ||||||| ||  |||| |||| | |||||||||| |||||||||||| |||||||||||||||    
T  38872334 aattacttttcccaccttatggccttctcccgcgccctgtaaaatttcaaaaaatgccctagtgcattccgaattttaaaatccggattcatgtttacta 38872235  T
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||  ||||||||||| |||||||||||||||||||| |   |||||||||||||||||||||||| ||||||||||||||||    
T  38872234 tttcagattttataatccggacaattcttatgtataattagccatcagactctctcacatttcagcagttttgagttttgcttt 38872151  T

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Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 40619428 - 40619612
Alignment:
Q  27 tgacaattacttttcccatcctatggtcttctcccg--tgctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt 124  Q
    |||| |||||||||| ||||||||||||||||||||  |||||||||| |||||||| || ||||||||||||| ||||||||||||   ||||||||||    
T  40619428 tgactattacttttctcatcctatggtcttctcccgcgtgctgtaaaatttttaaaaatgtctttgtgcattccagattttaaaatcagaattcatgttt 40619527  T
Q  125 actatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||  ||||||||||| | |||||||||||||   ||||   |||||||||||||||||||||| | ||||||||||||||||    
T  40619528 actatttcagattttataatccgaacaattcttatgt---atcagtcatcagactctctcacatttcagtagttttgagttttgcttt 40619612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 31220783 - 31220966
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg---ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttacta 128  Q
    ||||||||||||| |||||||| |||| ||| |   |||||||| ||  |||| |||| ||||| ||| ||||||||||||| | |||||||||||||||    
T  31220783 attacttttcccaccctatggttttctgccgcgaatctgtaaaatttccaaaaatgcccttgtgtattacggattttaaaattcggattcatgtttacta 31220882  T
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||| ||||||||||| ||||||||||||||||||||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  31220883 tttcggattttataatccggacaattcttatgtataatcagcaatcaaactctctcacatttcagcagttttgagttttgcttt 31220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 33488228 - 33488104
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||||    
T  33488228 ttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagactctctcaca 33488129  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||| | || ||||||||||||||||    
T  33488128 ttttaacagttttgagttttgcttt 33488104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 15799908 - 15799726
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgctgtaaaaatttt--aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||||| ||| | ||||||| | ||  || || ||||  |||| |||| |||||||||| |||||||||||||| |||||||||||| |||    
T  15799908 attacttttcccatcttatcgccttctcctgcgccctataattttttcaaaaatgcccttgtgcattctggattttaaaatccggattcatgtttattat 15799809  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| | || ||||||||||||||||    
T  15799808 ttcggattttataatccggacaattcttatgtataatcagacatcagactctctcacattttaacagttttgagttttgcttt 15799726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 4064289 - 4064423
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||   ||||||    
T  4064289 aaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactattttggattttataatccggacaattcttatgtataatcagtcatcaga 4064388  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| | || ||||||||||||||||    
T  4064389 ctctctcacattttaacagttttgagttttgcttt 4064423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 20892240 - 20892106
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||   |||| |    
T  20892240 aaaaatgcccttgtgcatttcggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttaggtataatcagccatcaaa 20892141  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||  |||||||||||||||    
T  20892140 ctctctcacatttcagcagctttgagttttgcttt 20892106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 29863177 - 29863053
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   |||||||||||||| |    
T  29863177 ttgtgcattccatattttaaaatccggattcatgtttactatttcgaattatataatccggacaattcttatgtataatcagccatcagactctctcata 29863078  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||| | || ||||||||||||||||    
T  29863077 ttttaacagttttgagttttgcttt 29863053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 32841454 - 32841598
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtat 163  Q
    |||||||  ||| |||| |||| ||||||| |||||||||||||||   ||||||||||| ||||||||| ||||||||||| ||||||||||||| |||    
T  32841454 ctgtaaatttttcaaaaatgcccttgtgcaatccggattttaaaatttggattcatgtttcactatttcggattttataatccggacaattcttatatat 32841553  T
Q  164 aatcaaatatcagactctctcacatttcagcatttttgagttttg 208  Q
    |||||  |||||||||||||||||||||| || ||||||||||||    
T  32841554 aatcagctatcagactctctcacatttcaacaattttgagttttg 32841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 38372924 - 38372800
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||| ||| |||||||| |||||||||   ||||||||||||||||    
T  38372924 ttgtgcattccggattttaaaatccggattcatatttactatttcagattttataatccggataattcttacgtataatcagccatcagactctctcaca 38372825  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||||| || |||||| |||||||||    
T  38372824 tttcaacagttttgaattttgcttt 38372800  T

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Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 6157991 - 6157901
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatca 168  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  6157991 aaaaatgcctttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataattcggacaattcttatgtataatca 6157901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 39525393 - 39525250
Alignment:
Q  68 taaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatc 167  Q
    ||||| |||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||||| | ||||||||||| ||||||||| |||||||||||    
T  39525393 taaaatttttaaaaatgcctttatgcattccggattttaaaattcggattcatatttactattttggattttataatccggacaattc-tatgtataatc 39525295  T
Q  168 aaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |   |||||| ||||| | ||||||| | ||||||||||||||||    
T  39525294 agccatcagattctcttatatttcagtagttttgagttttgcttt 39525250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 327 - 432
Target Start/End: Complemental strand, 39525145 - 39525040
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    ||||| | ||||||||||||||||    
T  39525145 tttttcggatttttatgagaatatgaaaaattggtctaaacgatggaattttggattttgaggggcagagtcccacaagaagttccttctaagggagtca 39525046  T
Q  427 tagtcc 432  Q
    | ||||    
T  39525045 tggtcc 39525040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 14112357 - 14112257
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||  |||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  14112357 ctgtaaaatttgcaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataatccggacaattcttatttata 14112258  T
Q  165 a 165  Q
    |    
T  14112257 a 14112257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 6157761 - 6157676
Alignment:
Q  83 tgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatca 168  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||||||||||| |||||||||    
T  6157761 tgcccttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataatccagacaattcttacgtataatca 6157676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 12464620 - 12464733
Alignment:
Q  99 ggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcattt 198  Q
    |||||||| ||||| || ||||||||||||||||| ||||||| || |||| ||||||||||||||||||   |||||| ||||||||||||||||| ||    
T  12464620 ggattttataatccggaatcatgtttactatttcggattttattatttggagaattcttatgtataatcagtcatcagaatctctcacatttcagcagtt 12464719  T
Q  199 ttgagttttgcttt 212  Q
    ||||||||| ||||    
T  12464720 ttgagttttccttt 12464733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 212
Target Start/End: Original strand, 24203167 - 24203348
Alignment:
Q  31 aattacttttcccatcctatggtcttctcccgtgctgtaaaaatttt--aaaattgcctttgtgcattccggattttaaaatccagattcatgtttacta 128  Q
    |||||||||||||| ||| ||  ||||||||| ||  || ||| |||  |||| |||| | ||| ||| ||||||||||||| | ||||||||||||||     
T  24203167 aattacttttcccaccctgtgaccttctcccgcgccctacaaaatttccaaaaatgccatggtgtatttcggattttaaaattcggattcatgtttactt 24203266  T
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||| ||||||||||| ||||||||||||| ||||||||  |||||||  ||||||||||||| |  ||||||||||||||||    
T  24203267 tttcggattttataatccggacaattcttatatataatcatctatcaga--ctctcacatttcaactgttttgagttttgcttt 24203348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 14112211 - 14112129
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||| |||| ||||    
T  14112211 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggattcatggtcc 14112129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 37183528 - 37183638
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat-----gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaaggg 421  Q
    ||||||| |||||||||||||||||||||||     ||||||||| |||||||||||||||||||||||||||||||  ||||||  ||||||||| |||    
T  37183528 tttttcgaatttttctgagaatatgaaaaatcaaatgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagatgtcccttctacggg 37183627  T
Q  422 agtcatagtcc 432  Q
    |||||| ||||    
T  37183628 agtcatggtcc 37183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 6157075 - 6156995
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||||| ||||    
T  6157075 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtccctactacgggagtcatggtcc 6156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 15958431 - 15958252
Alignment:
Q  31 aattacttttccca-tcctatggtcttctccc--gtgctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttact 127  Q
    |||||||||||||| ||||||| |||| | ||  || |||||||| |||||||| || |||||||||||  ||||||||||||    |||||||||||||    
T  15958431 aattacttttcccaatcctatgatcttgttccacgttctgtaaaatttttaaaaatgtctttgtgcattttggattttaaaatttgaattcatgtttact 15958332  T
Q  128 atttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    |||| | ||||||||||| | | |||||||||| ||||| |   |||| ||||||||||||||||| | |||||||||||    
T  15958331 attttggattttataatccgaataattcttatgcataattagccatcaaactctctcacatttcagtagttttgagtttt 15958252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 26189849 - 26189944
Alignment:
Q  117 tcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||| ||||||   |||||| ||||||||||||||||| ||||||||||||||||    
T  26189849 tcatgtttactatttcagattttataattcggacaattcttatgtttaatcagccatcagaatctctcacatttcagcagttttgagttttgcttt 26189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 26898577 - 26898660
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||  |||||||| ||||    
T  26898577 atgaaaaatgagtctaaacgatgaaattttggattttgaggggcggagtcctgtaagaagtcccttctacaggagtcatggtcc 26898660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 31928899 - 31928982
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||  | ||||| ||||||||||||||||||| ||||    
T  31928899 atgaaaaatgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctaagggagtcatggtcc 31928982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 32841748 - 32841823
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||| |||||||||    
T  32841748 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaggggagtcat 32841823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 26898347 - 26898424
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||| | || ||||||||||||||||    
T  26898347 attttataatctggacaattcttatgtataatcagccatcagactctctcacattttaacagttttgagttttgcttt 26898424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 7884777 - 7884694
Alignment:
Q  129 tttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||| ||||||||||| |  |||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  7884777 tttcggattttataatccgatcaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 7884694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 38692557 - 38692640
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccctt-ctaagggagtcatagtcc 432  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||| ||||    
T  38692557 tgaaaaatgtgtctaaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttcctaagggagtcatggtcc 38692640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 26190096 - 26190174
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||| | ||||||| |||||||||    
T  26190096 atgaaaaatgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagttccttctaggggagtcat 26190174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 31221114 - 31221190
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| || |||||    
T  31221114 atgaaaaatgg-tctaaacgatgaaattttggattttgaggggcggagtctcgtaagaagtcccttctatggaagtca 31221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 425
Target Start/End: Complemental strand, 41253666 - 41253577
Alignment:
Q  336 tttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||| || ||||||||   ||||| || ||||||||||||||    
T  41253666 tttttctgagtatatgaaaaatgggtctaaacgatgaaattttagattttgaaggtcggagtctctaaagaagtctcttctaagggagtc 41253577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Original strand, 11185961 - 11186037
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||| ||||||| | |||||||    
T  11185961 atgaaaaatgggtctaaacgattgaattttgaattttgaggggcggagtatcgtaagaagtcccttcaacgggagtc 11186037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 33487955 - 33487880
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||    ||||| |||||||||||||||||||    
T  33487955 aaaaatgggtctaaacgatggaattttggatttttaggggcggggtcccaaaagaagtcccttctaagggagtcat 33487880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 27158431 - 27158385
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27158431 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 27158385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 27213046 - 27212972
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  27213046 aaaaagggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtcccttctaggggagtcat 27212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 5456400 - 5456327
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| | ||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| |||||    
T  5456400 aaaaatggatttaaacgatgaaattttggattttgagaggcggagtcccgtaagaaatcccttctaagtgagtc 5456327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 40619762 - 40619826
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttct 416  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| | ||||||    
T  40619762 aaaaatgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagaagttccttct 40619826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 7884541 - 7884458
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||   ||||||| || |||||| ||||||||| ||||    
T  7884541 atgaaaaatgggtctaaacaatgaaattttagattttgaggggcggagttccgtaagaagtctcttctacgggagtcatggtcc 7884458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 424
Target Start/End: Complemental strand, 26093802 - 26093731
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||  ||||||| |||| |||| ||||||    
T  26093802 aaaatgggtctaaatgatggaattttggattttgaggggaggagtcccgtaagaagtcccctctacgggagt 26093731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 20891959 - 20891881
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||| |||||||||||||||||||||||||||| || |||| ||  ||||||| |||||| || |||||||||    
T  20891959 atgaaaaatgtgtctaaacgatggaattttggattttgaaggacggaatcccgtaagaagtcccttgtaggggagtcat 20891881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 4064530 - 4064587
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattt 384  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  4064530 ttttttggatttttctaagaatatgaaaaatgggtctagacgattgaattttggattt 4064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 16429323 - 16429250
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||||||||||||  ||||||| ||||||||||||||||||  ||||||| |||||||||||| ||||    
T  16429323 aaaaaagggtctaaacgataaaattttgaattttgaggggcggagtcccgtaagaagtcccttctaaggtagtc 16429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 21070709 - 21070636
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||   |||||| ||||||||| |||||||    
T  21070709 aaaaatgggtctaaacaatggaattttggattttgaggggcagtgtccaataagaagtcccttctaggggagtc 21070636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 28445284 - 28445348
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||||||||||| ||||||||| |  |||||| |||||||||||||||||    
T  28445284 gtctaaacgatggaattttggattttga-gggcggagtatcataagaagtcccttctaagggagtc 28445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 38372645 - 38372565
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||| |||||||  ||||||||||||||||||||||||| ||||||  ||||||| || ||||||||| |||||| ||||    
T  38372645 aaaaaagggtctaggcgatggaattttggattttgaggggtggagtcccgtaagaagtctcttctaaggaagtcatggtcc 38372565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 12464892 - 12464975
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| ||||||||  |||||||||||||||||||||||| |||||  ||||||| | |||||||  |||||||| ||||    
T  12464892 atgaaaaataggtctaaataatggaattttggattttgaggggcagagtcccgtaagaagttccttctataggagtcatggtcc 12464975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 15799569 - 15799523
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15799569 aaaaattggtctaaacgatggaattttggattttgaggggtggagtc 15799523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 18515150 - 18515104
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18515150 aaaaatgggtctaaatgatggaattttagattttgaggggcggagtc 18515104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 33331478 - 33331420
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||||||| |||||||||||||||||| || ||||| ||||||| |||||||||    
T  33331478 ggtctaaacgatgaaattttggattttgagggacgaagtctggtaagaagtcccttcta 33331420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 38030770 - 38030843
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatca 168  Q
    |||||||||| | ||||| || |  |||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  38030770 ttccggatttcataatccggaatggtgtttactatttcagattttataatccggacaattcttatgtataatca 38030843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 15958093 - 15958021
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    |||||| ||||||||||||| |||||||||||||||| |||| ||||   |||||| || |||||||||||||    
T  15958093 aaaaattggtctaaacgatgaaattttggattttgagaggcgaagtcccataagaagtcgcttctaagggagt 15958021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 420
Target Start/End: Complemental strand, 26622461 - 26622394
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagg 420  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||  |||||| || | |||||||    
T  26622461 aaaatgggtctaaacgataaaattttgaattttgaggggcggagtctcataagaagtctcatctaagg 26622394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 398
Target Start/End: Original strand, 6800725 - 6800763
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  6800725 gtctaaacgatgaaattttggattttgaggggcggagtc 6800763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 425
Target Start/End: Original strand, 43387944 - 43388009
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||| |||||||||||||||||||| || |||||||  ||||||| ||| |||||||||||||    
T  43387944 ggtctaaatgatggaattttggattttga-ggacggagtcccgtaagaagtcctttctaagggagtc 43388009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 6800498 - 6800575
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||| ||  ||  |||||||||||||   |||||| ||||||||||||||||| |||||| |||||||||    
T  6800498 attttataatcttgaatatggttatgtataatcagtaatcagaatctctcacatttcagcagttttgaattttgcttt 6800575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 8739079 - 8739132
Alignment:
Q  372 gaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||||||||||||||||||||||||  |||| || | |||||||||||||||    
T  8739079 gaattttggattttgaggggcggagtcccgtaataagttccttctaagggagtc 8739132  T

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Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 38640979 - 38640938
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggg 390  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  38640979 atgaaaaaagggtctaaatgatggaattttggattttgaggg 38640938  T

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Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 5247276 - 5247316
Alignment:
Q  353 aaaatgggtctaaacgatggaattttggattttgaggggcg 393  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  5247276 aaaatgagtctaaacgatgaaattttggattttgaggggcg 5247316  T

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Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 28083157 - 28083193
Alignment:
Q  356 atgggtctaaacgatggaattttggattttgaggggc 392  Q
    |||||||| ||||||||||||||||||||||||||||    
T  28083157 atgggtctgaacgatggaattttggattttgaggggc 28083193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 19027393 - 19027338
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||||    
T  19027393 aaaaataggtctaaacgatataattttggattttgaggggtgaagtctcgtaagaa 19027338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 395
Target Start/End: Original strand, 5535204 - 5535250
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    ||||||||| |||||||||||||||||||  |||||||| |||||||    
T  5535204 atgaaaaattggtctaaacgatggaatttatgattttgatgggcgga 5535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 20892000 - 20891970
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  20892000 tttttcggatttttctgagaatatgaaaaat 20891970  T

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Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 26095417 - 26095367
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtct 399  Q
    ||||||||||||||||||||||  || |||| ||||||||||||| |||||    
T  26095417 atgaaaaatgggtctaaacgatataactttgaattttgaggggcgaagtct 26095367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 28624357 - 28624403
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||||||||||| ||||||| ||||||||| ||| |||||    
T  28624357 aaaaatgggtctaaacgatagaattttagattttgagtggcagagtc 28624403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 33487998 - 33487968
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  33487998 tttttcggatttttctgagaatatgaaaaat 33487968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 34530249 - 34530208
Alignment:
Q  359 ggtctaaacgatggaattttggattttgaggggcggagtcttg 401  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  34530249 ggtctaaacgatggaattttgaattttga-gggcggagtcttg 34530208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 42289792 - 42289754
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  42289792 gtctaaacgatagaattttggattttgaggggcagagtc 42289754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Complemental strand, 12847749 - 12847717
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggat 382  Q
    |||||||||||||||||||||| ||||||||||    
T  12847749 tgaaaaatgggtctaaacgatgaaattttggat 12847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 25490830 - 25491011
Alignment:
Q  33 ttacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatt 130  Q
    |||||||||||| | |||||||||||  || ||  ||||||| ||  |||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  25490830 ttacttttcccaccttatggtcttctttcgcgccctgtaaaatttccaaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactatt 25490929  T
Q  131 tcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||| ||||||||||| | ||||||||||||||||||||   |||||||||||||||||||||||| |||| |||||||||||    
T  25490930 tcggattttataatccgaacaattcttatgtataatcagccatcagactctctcacatttcagcagttttaagttttgcttt 25491011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 47874404 - 47874262
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  47874404 ctgtaaaatttttaaaaatgcccttgtgcattccggattttaaaatccgcattcatgtttattatttcggattttataatccggacaattcttatgtata 47874305  T
Q  165 atcaaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    ||||  ||||||||||||||| ||||||||| |||||||||||    
T  47874304 atcagctatcagactctctcatatttcagcagttttgagtttt 47874262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 54630937 - 54631108
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtg--ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| |||||| || |  |||||||| ||| |||| |||| | || |||||||||||||||||||||||||||||||||||||    
T  54630937 attacttttcccaccctatggccttctctcgcgtcctgtaaaattttcaaaaatgccctcgtacattccggattttaaaatccagattcatgtttactat 54631036  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttg 201  Q
    | || ||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  54631037 tccggattttataatccggagaattcttatgtataatcaactatcacactctctcacatttcagcagttttg 54631108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 25751895 - 25752076
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||| | ||||||| ||||||||| ||  ||||||| ||| |||| ||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  25751895 attacttttcc-accctatggccttctcccgcgccctgtaaaattttcaaaaatgcttttgtgcattccggattttaaaatccggattcatgtttacaat 25751993  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    || | ||||||||||| | ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||||    
T  25751994 tttggattttataatccgaacaattcttatgtataatcagccatcagactctctcacatttcaacagttttgagttttgcttt 25752076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 7932325 - 7932143
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||| |||| |||  ||||||||| ||  ||||||| ||| |||| |||| || ||||||||  |||||||||||| ||||||||||||||||    
T  7932325 attacttttcctatccaatgaccttctcccgcgccctgtaaaattttcaaaaatgcccttatgcattccaaattttaaaatccggattcatgtttactat 7932226  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| | ||||||||||||||||||||   |||||||||||||||||||||||| |||||| |||||||||    
T  7932225 ttcggattttataatccgaacaattcttatgtataatcagtcatcagactctctcacatttcagcagttttgaattttgcttt 7932143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 46439730 - 46439912
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| || ||||||| |||||||||  |  ||||||| ||| |||| ||||  |||||||| | ||||||||||| | ||||||||||||||||    
T  46439730 attacttttctcaccctatggccttctcccgcaccctgtaaaattttaaaaaatgcccatgtgcatttcagattttaaaattcggattcatgtttactat 46439829  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||| |||||||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  46439830 ttcaaattttataatccggaaaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 46439912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 8107054 - 8106920
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||| | || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||||    
T  8107054 aaaaatgcccttgtgtaatcaggattttaaaattcagattcatgtttactatttcggattttataatctggacaattcttatttataatcagccatcaga 8106955  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||| ||||||||||||||||    
T  8106954 ctctctcacatttcagcagttttgagttttgcttt 8106920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 48318545 - 48318711
Alignment:
Q  47 ctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataat 144  Q
    |||||| ||||||||| ||  ||||||| ||  |||| |||| ||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||    
T  48318545 ctatggccttctcccgcgccctgtaaaatttccaaaaatgcccttgtgcattccagattttaaaattcggattcatgtttactatttcggattttataat 48318644  T
Q  145 ctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    | ||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||    
T  48318645 ccggacaattcttatgtataatcagcc-tcagactctctcacatttcagcagttttgagttttgcttt 48318711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 55052181 - 55052315
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||   ||||||    
T  55052181 aaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactattttggattttataatccggataattcttatgtataatcagtcatcaga 55052280  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| | || ||||||||||||||||    
T  55052281 ctctctcacattttaacagttttgagttttgcttt 55052315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 17932643 - 17932766
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||||    
T  17932643 ttgtgcatttcggattt-aaaatccggattcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagactctctcaca 17932741  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    |||||||| ||||||||||| ||||    
T  17932742 tttcagcagttttgagtttttcttt 17932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 53893465 - 53893647
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    ||||||||||||| ||||||| ||||||||  ||  ||||||| ||| |||| |||  || ||||||||||||||||||||   ||||||||||||||||    
T  53893465 attacttttcccaccctatggccttctcccacgccctgtaaaattttcaaaaatgctcttatgcattccggattttaaaatttggattcatgtttactat 53893564  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  |||||||||||  || ||||||||||||||||||   |||||||||||||||||||||||| ||||||||| ||||||    
T  53893565 ttcagattttataatccagaaaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttctgcttt 53893647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 48318816 - 48318921
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | | ||||||    
T  48318816 tttttcagatttttctgtgaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttccaggagagtca 48318915  T
Q  427 tagtcc 432  Q
    | ||||    
T  48318916 tggtcc 48318921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 2505511 - 2505657
Alignment:
Q  66 tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataa 165  Q
    ||||||| ||| |||| |||| ||||| |||| |||||||||||||| ||||||| |||||||||||| ||||||||||| | | |||||||||||||||    
T  2505511 tgtaaaattttcaaaaatgcccttgtgtattctggattttaaaatccggattcatatttactatttcggattttataatccgaataattcttatgtataa 2505610  T
Q  166 tcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||   |||| ||||||||||||||||||| || ||| |||||||||    
T  2505611 tcagccatcaaactctctcacatttcagcaattgtgaattttgcttt 2505657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 38536853 - 38536719
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||| ||||||||||||||   ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||   ||| ||    
T  38536853 aaaaatgcccttgtgcatttcggattttaaaatctgaattcatgtttactattttggattttataatctggataattcttatgtataatcagtcatcgga 38536754  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||| | || ||||||||||||||||    
T  38536753 ctctctcacattttaacagttttgagttttgcttt 38536719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 40704595 - 40704471
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcaca 187  Q
    |||||||||  |||||||||||||| |||||||||||||||||| | ||||||||||| || ||| |||||||||||||||   ||||||||||| ||||    
T  40704595 ttgtgcattttggattttaaaatccggattcatgtttactattttggattttataatccgggcaactcttatgtataatcagccatcagactctcccaca 40704496  T
Q  188 tttcagcatttttgagttttgcttt 212  Q
    ||||| || ||||||||||||||||    
T  40704495 tttcaacagttttgagttttgcttt 40704471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 6228327 - 6228444
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||||||||| | |||||| | ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||   |||| | ||||||||||||||||    
T  6228327 ttccggatttcataatccataatcatgtttactatctcggattttataatccggacaattcttatgtataatcagccatcataatctctcacatttcagc 6228426  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  6228427 agttttgagttttgcttt 6228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 327 - 432
Target Start/End: Complemental strand, 38417205 - 38417101
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||| | ||||||    
T  38417205 tttttcggatttttatgagaatatgaaaaatgg-tctaaacgatgaaattttggattttgaagggcggagtcctgtaagaagtcccttctacgtgagtca 38417107  T
Q  427 tagtcc 432  Q
    | ||||    
T  38417106 tggtcc 38417101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 41412748 - 41412843
Alignment:
Q  117 tcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||| | ||||||||||||||||    
T  41412748 tcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcagtagttttgagttttgcttt 41412843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 32442457 - 32442363
Alignment:
Q  108 aatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttga 202  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||| ||||||||||||||||| ||||||    
T  32442457 aatccggaatcatgtttactatttcgaattttataatctggacaattcttatgtataaccagccatcagaatctctcacatttcagcagttttga 32442363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 27631879 - 27631996
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||| ||||| | ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||| |||||||||||     
T  27631879 ttccagatttcataatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctttcacatttcagt 27631978  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  27631979 agttttgagttttgcttt 27631996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 25752220 - 25752300
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||||| ||||    
T  25752220 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatggtcc 25752300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 34973503 - 34973399
Alignment:
Q  108 aatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagtttt 207  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||||  | |||||||||||    
T  34973503 aatccggaatcatgtttactatttcggattttataatccggacaattcttatgtataatcagccatcagaatctctcacatttcaatagttttgagtttt 34973404  T
Q  208 gcttt 212  Q
    |||||    
T  34973403 gcttt 34973399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 31581958 - 31582033
Alignment:
Q  93 cattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatca 168  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  31581958 cattccggattttaaaatccggattcatgtttactatttcggattttataatccggaaaattcttatgtataatca 31582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 7932046 - 7931966
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||    
T  7932046 aaaaatgtgtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtcc 7931966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 27741667 - 27741780
Alignment:
Q  99 ggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcattt 198  Q
    ||||||| |||||  |||||||| ||||||||||| ||||||||| | |||||||| ||||||||||||    |||||||||||||||||||||||| ||    
T  27741667 ggattttgaaatctggattcatgattactatttcggattttataacccggacaatttttatgtataatcggtcatcagactctctcacatttcagcagtt 27741766  T
Q  199 ttgagttttgcttt 212  Q
    || |||||| ||||    
T  27741767 tttagtttttcttt 27741780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 8106808 - 8106709
Alignment:
Q  328 ttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||| |||||||| |||||||||||||||||| ||||||||||  |||||| ||||||||| |||||||||  ||||||| | ||||||| |||||||||    
T  8106808 tttttggatttttttgagaatatgaaaaatggatctaaacgatttaatttttgattttgagaggcggagtcccgtaagaagttccttctacgggagtcat 8106709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 19835910 - 19835835
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||| || |||||||||    
T  19835910 aaaaatgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtcccttttaggggagtcat 19835835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 25538755 - 25538830
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||  ||||||| || ||||||||||||||||    
T  25538755 aaaaatgtgtctaaacgatggtattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcat 25538830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 29823256 - 29823154
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| ||||||||||| ||| |||||||||| ||| |||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||  | |||||    
T  29823256 aaaaatgcctttgtgctttctggattttaaa-tccggattcatgtttactattttggattttataatccggacaatccttatgtataatcagttgtcaga 29823158  T
Q  178 ctct 181  Q
    ||||    
T  29823157 ctct 29823154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 424
Target Start/End: Complemental strand, 38536564 - 38536489
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||| |||||| |||||    
T  38536564 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcctttctaaaggagt 38536489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 46440047 - 46440129
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||  ||||||||| ||||    
T  46440047 tgaaaaatgtgtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctttgggagtcatggtcc 46440129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 6228592 - 6228665
Alignment:
Q  354 aaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||||| | ||||||| |||||||||    
T  6228592 aaatgggtctaaacaatggaattttggattttgaggggaggagtcctgtaagaagttccttctacgggagtcat 6228665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 18050963 - 18051046
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||  |||| || | ||||||| ||||||||| ||||    
T  18050963 atgaaaaaagggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtcc 18051046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 25491169 - 25491252
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||   | |||| ||||||||||||||||||| ||||    
T  25491169 atgaaaaattggtctaaacgatggaattttggattttgagggacggaatcccttgagaagtcccttctaagggagtcatggtcc 25491252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 29822973 - 29822890
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||  ||| ||| ||||||||| ||||||||| ||||    
T  29822973 atgaaaaatgagtctaaacgatggaattttgaattttgaggggcagagtcccgtaggaagtcccttctacgggagtcatggtcc 29822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 34973257 - 34973174
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||| |||||| || | ||||||| ||||    
T  34973257 atgaaaaatgggtctaaacaatggaattttggattttgaggggcggagtcccgaaagaagtcccttttaggagagtcatggtcc 34973174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 420
Target Start/End: Complemental strand, 37222357 - 37222286
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagg 420  Q
    |||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  37222357 atgaaaaaagggtctaaacgttggaattttggattttgaggggaggagtctcgtaagaagttccttctaagg 37222286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 40704057 - 40703974
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||| | |||||||| | |||||| ||||    
T  40704057 atgaaaaatgggtttaaacgatggaattttagattttgaggggcggagtcccgtaagaagttccttctaatgaagtcatggtcc 40703974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 424
Target Start/End: Original strand, 53893800 - 53893875
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |   |||||| ||||||||| ||||||    
T  53893800 atgaaaaatgggtctaaacgatgaaattttggattttgaggggcggagacccataagaagtcccttctacgggagt 53893875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 54631266 - 54631349
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||||  ||||||| ||| ||||| ||||||||| ||||    
T  54631266 atgaaaaattggtctaaacgatggaattttgtattttgaggtgcggagtcccgtaagaagtcctttctatgggagtcatggtcc 54631349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 14473989 - 14474055
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttc 415  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||  ||||||| |||||||    
T  14473989 atgaaaaatgggtctaaacgatgaaattttggatcttgaggggcggagtcccgtaagaagtcccttc 14474055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 49001341 - 49001407
Alignment:
Q  361 tctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    ||||||||||| ||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  49001341 tctaaacgatgtaattttggattttgaggagcggagtcccgtaagaagtcccttctaagggagtcat 49001407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 3702808 - 3702885
Alignment:
Q  135 attttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||| |||| |||||||||||||| |||||||   ||||||||||||||||||| |||| ||||||||||||||||    
T  3702808 attttaaaatccggacaattcttatggataatcagccatcagactctctcacatttaagcagttttgagttttgcttt 3702885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 17932914 - 17932994
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||| |||||||||||||||||||| |||||| |||  |||||| | | ||||||||||||||| ||||    
T  17932914 aaaaatgggtctaaactatggaattttggattttgagaggcggaatctcttaagaagttctttctaagggagtcatggtcc 17932994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 49001038 - 49001186
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgttt-actatttcgaattttataatctggacaattcttatgtat 163  Q
    |||||||  ||| |||| |||| ||||||| | ||||||| | |||||  |||||||||| |||| |||| ||||||||||| | || || |||||||||    
T  49001038 ctgtaaatttttcaaaaatgcccttgtgcaattcggatttcataatccgaattcatgtttcactaattcggattttataatccgaactatgcttatgtat 49001137  T
Q  164 aatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||  |||||| |||| ||||||| |||| |||||| |||||||||    
T  49001138 aatcaacaatcagaatctcacacatttgagcagttttgaattttgcttt 49001186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 395
Target Start/End: Original strand, 31582207 - 31582250
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31582207 aaaaatgggtctaaacgatggaattttggattttgaggggcgga 31582250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 427
Target Start/End: Original strand, 3703029 - 3703107
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcat 427  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||   |||||| ||  |||||||||||||||    
T  3703029 atgaaaaatgggtccaaacgatggaattttggattttgaaggacggagtcccataagaagtcatttctaagggagtcat 3703107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 20083363 - 20083317
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20083363 atgaaaaatgggtctaaacgatggaattttggattttgaggagcgga 20083317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 19836068 - 19836011
Alignment:
Q  88 ttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatc 145  Q
    ||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||    
T  19836068 ttgtgcattccggattttaaaattcggattcatgtttactattttggattttataatc 19836011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 32601231 - 32601182
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  32601231 atgaaaaataggtctaaacgatggaattttggattttgagcggcggagtc 32601182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 418
Target Start/End: Original strand, 48629340 - 48629409
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaa 418  Q
    ||||||| |||||||||| |||||||||||  ||||||||||||||| ||| ||||||| ||||||||||    
T  48629340 atgaaaattgggtctaaatgatggaattttaaattttgaggggcggaatctcgtaagaagtcccttctaa 48629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 55052429 - 55052486
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattt 384  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  55052429 ttttttggatttttctaagaatatgaaaaatgggtctagacgattgaattttggattt 55052486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 52089628 - 52089572
Alignment:
Q  368 gatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagt 424  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||    
T  52089628 gatggaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagt 52089572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 2505801 - 2505888
Alignment:
Q  346 aatatgaaaaat-gggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||| || ||  ||||||| ||||||||  ||||||||| ||||    
T  2505801 aatatgaaaaatagggtgtaaacgatagaattttggattttgaggggcagaatcccgtaagaagtcccttcttggggagtcatggtcc 2505888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 23524440 - 23524327
Alignment:
Q  95 ttccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagc 194  Q
    |||| ||||||| ||||| || ||||||||||||||||| ||||||||||  ||||||| |||   ||||||||   |||||| ||||||||||||||      
T  23524440 ttccagattttataatccggaatcatgtttactatttcggattttataattcggacaat-ctt---tataatcagccatcagaatctctcacatttcatt 23524345  T
Q  195 atttttgagttttgcttt 212  Q
    | ||||||||||||||||    
T  23524344 agttttgagttttgcttt 23524327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 6003447 - 6003505
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||||  |||||||    
T  6003447 atgaaaaattggtctaaacaatagaattttggattttgaggggcggagtcccgtaagaa 6003505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 4936499 - 4936572
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||   |||||| |  ||||||||||||||    
T  4936499 aaaaatgggtctaaaagatgaaattttggattttgagggacggagtcccataagaagtatcttctaagggagtc 4936572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 5803202 - 5803251
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  5803202 atgaaaaatgggtctaaacgatggaattttgaattttgtggggtggagtc 5803251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 42497712 - 42497785
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||| ||||||||| ||| |||||| ||||||||||||||||||| ||||||||  |||||| | |||||||    
T  42497712 aaaaataggtctaaacaatgaaattttagattttgaggggcggagtcctgtaagaagccccttccatgggagtc 42497785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 38417410 - 38417298
Alignment:
Q  100 gattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttt 199  Q
    ||||||| |||||  ||||||||||   | |||| ||| || |||| ||||||||||||||||||| ||   |||||||||||| |||||||| || |||    
T  38417410 gattttataatccgaattcatgtttcacaattcggattctaaaatcaggacaattcttatgtataagcagccatcagactctcttacatttcaacagttt 38417311  T
Q  200 tgagttttgcttt 212  Q
    |||||||| ||||    
T  38417310 tgagttttccttt 38417298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 23524180 - 23524097
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||| ||||   ||| || ||||||||  ||||||||| ||||    
T  23524180 atgaaaaatgggtctaaataatgaaattttggattttgaggggcgaagtcccataataagtcccttcttcgggagtcatggtcc 23524097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 395
Target Start/End: Complemental strand, 47072377 - 47072334
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcgga 395  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||    
T  47072377 aaaaaagggtctaaacgatggaattttagattttgaggggcgga 47072334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 392
Target Start/End: Complemental strand, 49397404 - 49397361
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggc 392  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  49397404 atgaaaaatgggtctaaacaatgaaattttggattttgaggggc 49397361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 18050719 - 18050773
Alignment:
Q  67 gtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatg 121  Q
    |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||||||    
T  18050719 gtaaaattttcaaaaatgcccttgtgcattccggattttaaaatccggattcatg 18050773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 27741899 - 27741961
Alignment:
Q  361 tctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggag 423  Q
    ||||||| ||||||||||||||||||||||||||||||   |||||| | ||||||| |||||    
T  27741899 tctaaacaatggaattttggattttgaggggcggagtcccataagaagttccttctacgggag 27741961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 41322870 - 41322934
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||  ||||||| || ||||||    
T  41322870 aaaaatgggtctaaacgatggaa-tatggattttgaggggcggaatcccgtaagaagtctcttcta 41322934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 47784383 - 47784338
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||    
T  47784383 aaaaattggtctaaacgatgaaattttggattttgaggggaggagt 47784338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 48095639 - 48095704
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttcta 417  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||||  | ||||| |||||||||    
T  48095639 aaaaatgggtctaatcgatggaatttcggattttgaaaggcggagtcccgcaagaagtcccttcta 48095704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 42340188 - 42340236
Alignment:
Q  147 ggacaattcttatgtataatcaaatatcagactctctcacatttcagca 195  Q
    ||||||| |||||||||||||||  |||||||||||| |||||||||||    
T  42340188 ggacaatacttatgtataatcaaccatcagactctctaacatttcagca 42340236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 5043696 - 5043641
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||| || ||||||| ||||||||||||||||||||| | ||||||| |||||    
T  5043696 aaaaatgagtttaaacgaaggaattttggattttgaggggtgaagtcttgcaagaa 5043641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 39118537 - 39118482
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||||| ||||||||||| ||||||||||||| ||||| || ||| ||||||||    
T  39118537 aaaaatggttctaaacgatgaaattttggattttaaggggtggtgtcatgtaagaa 39118482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 41322615 - 41322729
Alignment:
Q  100 gattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataat--caaatatcagactctctcacatttcagcatt 197  Q
    |||||||||||||  ||||||||||  || |||| ||||||||||| | || || ||||||||||||  ||   |||||| |||||||||||||| |  |    
T  41322615 gattttaaaatccgaattcatgtttcttaattcggattttataatccgaactatacttatgtataatatcagcaatcagaatctctcacatttcatctgt 41322714  T
Q  198 tttgagttttgcttt 212  Q
    ||||| |||||||||    
T  41322715 tttgaattttgcttt 41322729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 3702984 - 3703014
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  3702984 tttttcggatttttctgagaatatgaaaaat 3703014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 17932872 - 17932902
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  17932872 tttttcggatttttctgagaatatgaaaaat 17932902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 29823012 - 29822982
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  29823012 tttttcggatttttctgagaatatgaaaaat 29822982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 31582172 - 31582202
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  31582172 tttttcggatttttctgagaatatgaaaaat 31582202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 47456984 - 47456950
Alignment:
Q  363 taaacgatggaattttggattttgaggggcggagt 397  Q
    |||||||||||||||||||||||||||| ||||||    
T  47456984 taaacgatggaattttggattttgagggacggagt 47456950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 47874149 - 47874119
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  47874149 tttttcggatttttctgagaatatgaaaaat 47874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Original strand, 54631225 - 54631255
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  54631225 tttttcggatttttctgagaatatgaaaaat 54631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 372307 - 372238
Alignment:
Q  356 atgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    |||||| |||||||||  |||||| ||||||||||| ||||||  ||||||| |||||| ||||| ||||    
T  372307 atgggtttaaacgatgatattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtc 372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 25140586 - 25140658
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||| |||| |||||||||||||||||||||||||  |||||| ||  | ||||| | |||||||||||||||    
T  25140586 aaaaaagggtgtaaacgatggaattttggattttga-tggcggaatcccgcaagaagttccttctaagggagtc 25140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 13509491 - 13509463
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  13509491 tttcggatttttctgagaatatgaaaaat 13509463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 20517561 - 20517624
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaatgggtctaaacgatggaattttggattttgagggg 391  Q
    |||| ||||||| | ||||||||||||||||| || |||||||| ||| ||| ||||||||||||    
T  20517561 ttttccggatttgtatgagaatatgaaaaatgagtttaaacgat-gaaatttagattttgagggg 20517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 25491128 - 25491156
Alignment:
Q  329 tttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||    
T  25491128 tttcggatttttctgagaatatgaaaaat 25491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 47224535 - 47224563
Alignment:
Q  96 tccggattttaaaatccagattcatgttt 124  Q
    |||||||||||||||||||||||||||||    
T  47224535 tccggattttaaaatccagattcatgttt 47224563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 53836072 - 53836116
Alignment:
Q  363 taaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||    
T  53836072 taaacgatagaattttggattttgagggacggagtcccgtaagaa 53836116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 38 - 212
Target Start/End: Original strand, 173813 - 173989
Alignment:
Q  38 tttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaa 135  Q
    ||||||| ||||| | ||||||||| ||  ||||||| ||| |||| |||| ||||||||| | ||||||||||||| |||||||||||||||||| | |    
T  173813 tttcccaccctatagccttctcccgcgccctgtaaaattttcaaaaatgccattgtgcatttcagattttaaaatccggattcatgtttactattttgga 173912  T
Q  136 ttttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  173913 ttttataatccggacaattcttatgtataatcagccatcagactctctcacatttcagcagttttgagttttgcttt 173989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 174136 - 174218
Alignment:
Q  350 tgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||  |||||||| ||||    
T  174136 tgaaaaatgtgtctaaacgatggaattttgaattttgaggggcggagtctcgtaagaagtcccttctacaggagtcatggtcc 174218  T

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Target: scaffold0508 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 2880 - 3014
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||| ||||||||||||| |||||||||||| ||||| | ||||||||||| ||||||||| |||||||||||||  ||||||    
T  2880 aaaaatgcccttgtgcattccagattttaaaatccggattcatgtttaatattttggattttataatccggacaattcctatgtataatcaaccatcaga 2979  T
Q  178 ctctctcacatttcagcatttttgagttttgcttt 212  Q
    |||||||||||||||||| ||||||||||||||||    
T  2980 ctctctcacatttcagcagttttgagttttgcttt 3014  T

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Target: scaffold0508; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 3170 - 3250
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||||| ||||| ||||    
T  3170 aaaaatgggtctaaacgatggaattttggattttgaggggtggggtcccataagaagtcccttctaagggggtcatggtcc 3250  T

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Target: scaffold0770 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 4501 - 4319
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| || ||||||  ||||||||| ||  ||||||| ||| |||| |||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  4501 attacttttctcaccctatgaccttctcccgcgccctgtaaaattttcaaaaatgcccttgtgtattccggattttaaaattccgattcatgtttactat 4402  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  |||||||||||  |||||||||||||||||||||   ||||| ||||||| |||||||||| ||||||||||||||||    
T  4401 ttcagattttataatccagacaattcttatgtataatcagccatcagtctctctcgcatttcagcagttttgagttttgcttt 4319  T

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Target: scaffold0770; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 4167 - 4122
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||    
T  4167 aaaaataggtttaaacaatggaattttggattttgaggggcggagt 4122  T

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Target: scaffold0770; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 4214 - 4185
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaa 356  Q
    ||||||||||||||||||||||||||||||    
T  4214 tttttcggatttttctgagaatatgaaaaa 4185  T

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Target: scaffold0029 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 102805 - 102623
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||| || ||||||  ||||||||| ||  ||||||| ||| |||| |||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  102805 attacttttctcaccctatgaccttctcccgcgccctgtaaaattttcaaaaatgcccttgtgtattccggattttaaaattccgattcatgtttactat 102706  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||  |||||||||||  |||||||||||||||||||||   ||||| ||||||| |||||||||| ||||||||||||||||    
T  102705 ttcagattttataatccagacaattcttatgtataatcagccatcagtctctctcgcatttcagcagttttgagttttgcttt 102623  T

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Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 102471 - 102426
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagt 397  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||    
T  102471 aaaaataggtttaaacaatggaattttggattttgaggggcggagt 102426  T

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Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Complemental strand, 102518 - 102489
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaa 356  Q
    ||||||||||||||||||||||||||||||    
T  102518 tttttcggatttttctgagaatatgaaaaa 102489  T

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Target: scaffold0027 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 141442 - 141624
Alignment:
Q  32 attacttttcccatcctatggtcttctcccgtgc--tgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactat 129  Q
    |||||||||||||  ||||||||||||  ||| |  ||||||| ||  |||| ||| ||||| |||| ||||||||||||| | ||||||||||||||||    
T  141442 attacttttcccactctatggtcttctttcgtaccctgtaaaatttccaaaaatgcttttgtacatttcggattttaaaattcggattcatgtttactat 141541  T
Q  130 ttcgaattttataatctggacaattcttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    |||| ||||||||||| |||||||||||||||||||| |   |||||||||||||| ||||||||| ||||||||||||||||    
T  141542 ttcggattttataatccggacaattcttatgtataattagccatcagactctctcatatttcagcagttttgagttttgcttt 141624  T

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Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 141771 - 141817
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtc 398  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||    
T  141771 aaaattgggtctaaacgatggaattttggattttgaggggcagagtc 141817  T

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Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 141727 - 141755
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaa 355  Q
    |||||||||||||||||||||||||||||    
T  141727 tttttcggatttttctgagaatatgaaaa 141755  T

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Target: scaffold0137 (Bit Score: 79; Significance: 9e-37; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 78 - 208
Target Start/End: Original strand, 8996 - 9126
Alignment:
Q  78 aaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtataatcaaatatcaga 177  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||   ||||||    
T  8996 aaaaatgcccttgtgcattccggattttaaaatccggattcatgtttactattttggattttataatccggacaattcttatgtaaaatcagccatcaga 9095  T
Q  178 ctctctcacatttcagcatttttgagttttg 208  Q
    ||||||||||||| | || ||||||||||||    
T  9096 ctctctcacattttaacagttttgagttttg 9126  T

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Target: scaffold0137; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 426
Target Start/End: Original strand, 9278 - 9348
Alignment:
Q  355 aatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtca 426  Q
    |||||||||||||||||| |||||| ||||||||||||||||||  ||||||| | ||||||||||||||||    
T  9278 aatgggtctaaacgatggtattttgaattttgaggggcggagtcccgtaagaagt-ccttctaagggagtca 9348  T

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Target: scaffold0010 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 141150 - 141021
Alignment:
Q  65 ctgtaaaaattttaaaattgcctttgtgcattccggattttaaaatccagattcatgtttactatttcgaattttataatctggacaattcttatgtata 164  Q
    |||||||| ||| |||| |||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||  ||||||    
T  141150 ctgtaaaattttcaaaaatgctcttgtgcattccggattttaaaatccggattcatgtttactatttcggattttataatccggacaattctggtgtata 141051  T
Q  165 atcaaatatcagactctctcacatttcagc 194  Q
    |||||  |||||||||||||||||| ||||    
T  141050 atcaaccatcagactctctcacattccagc 141021  T

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Target: scaffold0010; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 140860 - 140788
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtcatagtcc 432  Q
    |||||||||||| || |||||||||||||||||| ||||  ||||||| |||||| || ||||||||| ||||    
T  140860 gtctaaacgatgaaactttggattttgaggggcgaagtcccgtaagaagtcccttttatgggagtcatggtcc 140788  T

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Target: scaffold0182 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 23358 - 23300
Alignment:
Q  349 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaa 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23358 atgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaa 23300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 4745 - 4691
Alignment:
Q  360 gtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatccctt 414  Q
    |||||||||||| ||||||||||||||||||| ||||||  ||||||| ||||||    
T  4745 gtctaaacgatgtaattttggattttgaggggtggagtcccgtaagaagtccctt 4691  T

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Target: scaffold0564; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 4804 - 4774
Alignment:
Q  327 tttttcggatttttctgagaatatgaaaaat 357  Q
    |||||||||||||||||||||||||||||||    
T  4804 tttttcggatttttctgagaatatgaaaaat 4774  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 205887 - 205952
Alignment:
Q  352 aaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaa 418  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||||  ||||||| ||| ||||||    
T  205887 aaaaaagggtctaaatgatggaattttggattttga-gggcggagtcccgtaagaagtcctttctaa 205952  T

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Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 205672 - 205748
Alignment:
Q  348 tatgaaaaatgggtctaaacgatggaattttggattttgaggggcggagtcttgtaagaaatcccttctaagggagtc 425  Q
    ||||||||| | ||||||| |||| ||||||||||||||| ||| ||||||  ||||||| || ||||||||||||||    
T  205672 tatgaaaaaagagtctaaatgatgaaattttggattttga-gggtggagtcccgtaagaagtctcttctaagggagtc 205748  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 421029 - 421085
Alignment:
Q  156 ttatgtataatcaaatatcagactctctcacatttcagcatttttgagttttgcttt 212  Q
    ||||||||||||||  |||||| ||||||||||||||| | |||||| |||||||||    
T  421029 ttatgtataatcaacaatcagaatctctcacatttcagtagttttgaattttgcttt 421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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