View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4719-Insertion-7 (Length: 542)

Name: NF4719-Insertion-7
Description: NF4719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4719-Insertion-7
NF4719-Insertion-7
[»] chr1 (48 HSPs)
chr1 (6-542)||(30026890-30027408)
chr1 (77-249)||(29570686-29570853)
chr1 (187-248)||(45682548-45682609)
chr1 (73-317)||(5586569-5586807)
chr1 (97-256)||(9877546-9877699)
chr1 (97-224)||(10296610-10296732)
chr1 (97-224)||(40934592-40934714)
chr1 (70-144)||(17191189-17191263)
chr1 (71-224)||(4695110-4695258)
chr1 (187-256)||(26095632-26095700)
chr1 (74-147)||(40770386-40770459)
chr1 (180-255)||(24234633-24234707)
chr1 (187-256)||(1501622-1501690)
chr1 (78-147)||(8853095-8853163)
chr1 (78-147)||(28554189-28554258)
chr1 (79-140)||(29570550-29570611)
chr1 (78-147)||(31289253-31289322)
chr1 (79-147)||(5618071-5618139)
chr1 (79-147)||(25012894-25012961)
chr1 (79-147)||(34480184-34480252)
chr1 (187-255)||(44344127-44344194)
chr1 (79-147)||(45286232-45286300)
chr1 (273-317)||(45682595-45682639)
chr1 (79-147)||(49021912-49021980)
chr1 (187-254)||(8641048-8641114)
chr1 (81-224)||(12649924-12650062)
chr1 (209-284)||(12752184-12752258)
chr1 (101-224)||(32694482-32694600)
chr1 (97-147)||(5618317-5618367)
chr1 (97-147)||(17504289-17504339)
chr1 (97-147)||(49021685-49021735)
chr1 (79-140)||(6488871-6488932)
chr1 (78-147)||(7349769-7349838)
chr1 (187-224)||(8828682-8828719)
chr1 (187-224)||(17504146-17504183)
chr1 (178-239)||(28552135-28552196)
chr1 (279-324)||(29570731-29570776)
chr1 (187-224)||(33471585-33471622)
chr1 (187-244)||(34704474-34704531)
chr1 (187-224)||(35521324-35521361)
chr1 (78-147)||(39672835-39672904)
chr1 (79-140)||(44344023-44344084)
chr1 (187-224)||(46283576-46283613)
chr1 (79-147)||(730799-730867)
chr1 (79-147)||(5586487-5586555)
chr1 (79-147)||(8853341-8853409)
chr1 (97-145)||(26095506-26095554)
chr1 (187-223)||(27065248-27065284)
[»] chr2 (40 HSPs)
chr2 (178-307)||(474648-474777)
chr2 (187-317)||(22399109-22399239)
chr2 (79-317)||(10714090-10714322)
chr2 (78-224)||(35412051-35412192)
chr2 (79-256)||(44490447-44490618)
chr2 (98-318)||(23926472-23926686)
chr2 (97-224)||(341330-341452)
chr2 (77-147)||(26499657-26499727)
chr2 (187-256)||(9912055-9912123)
chr2 (79-147)||(10192084-10192153)
chr2 (187-256)||(42950662-42950730)
chr2 (79-147)||(30488326-30488394)
chr2 (80-256)||(33274540-33274710)
chr2 (97-164)||(1650521-1650588)
chr2 (80-147)||(28789113-28789180)
chr2 (73-224)||(30488074-30488220)
chr2 (97-144)||(33274413-33274460)
chr2 (96-131)||(41537497-41537532)
chr2 (79-169)||(1479028-1479118)
chr2 (97-147)||(3888889-3888939)
chr2 (97-147)||(29154309-29154359)
chr2 (73-147)||(35411871-35411945)
chr2 (246-292)||(41537636-41537682)
chr2 (187-224)||(1270283-1270320)
chr2 (187-224)||(3322167-3322204)
chr2 (187-224)||(3888974-3889011)
chr2 (187-224)||(9027128-9027165)
chr2 (187-224)||(10192259-10192296)
chr2 (78-147)||(10714007-10714076)
chr2 (187-224)||(11724720-11724757)
chr2 (187-224)||(16350695-16350732)
chr2 (187-224)||(17549243-17549280)
chr2 (187-224)||(22196097-22196134)
chr2 (187-224)||(22486170-22486207)
chr2 (187-224)||(22899122-22899159)
chr2 (187-224)||(26499514-26499551)
chr2 (79-140)||(29154064-29154125)
chr2 (187-224)||(29175098-29175135)
chr2 (79-147)||(1650749-1650817)
chr2 (79-147)||(42950755-42950823)
[»] chr8 (31 HSPs)
chr8 (101-317)||(24566501-24566712)
chr8 (180-317)||(43497303-43497439)
chr8 (79-254)||(148293-148462)
chr8 (180-317)||(26187210-26187346)
chr8 (99-317)||(12649500-12649712)
chr8 (187-252)||(1802691-1802756)
chr8 (97-147)||(26938204-26938254)
chr8 (78-256)||(27712907-27713079)
chr8 (97-155)||(32063484-32063542)
chr8 (78-147)||(33278934-33279003)
chr8 (78-147)||(34199081-34199150)
chr8 (187-256)||(39198720-39198788)
chr8 (187-247)||(32478083-32478142)
chr8 (79-147)||(33279184-33279252)
chr8 (67-147)||(41617036-41617116)
chr8 (266-317)||(2241553-2241604)
chr8 (80-147)||(29596403-29596470)
chr8 (81-256)||(30253628-30253797)
chr8 (97-147)||(17494969-17495019)
chr8 (79-145)||(21660726-21660792)
chr8 (81-147)||(28828218-28828284)
chr8 (97-147)||(33526958-33527008)
chr8 (97-147)||(34632471-34632521)
chr8 (97-147)||(36556781-36556831)
chr8 (187-224)||(8156882-8156919)
chr8 (70-147)||(28828462-28828539)
chr8 (187-224)||(33279110-33279147)
chr8 (187-256)||(41617183-41617251)
chr8 (187-224)||(42684891-42684928)
chr8 (74-130)||(39198610-39198666)
chr8 (99-147)||(41617286-41617334)
[»] chr6 (36 HSPs)
chr6 (178-317)||(34493665-34493804)
chr6 (187-318)||(1368266-1368396)
chr6 (98-256)||(8129676-8129828)
chr6 (79-224)||(2316663-2316803)
chr6 (187-246)||(10384191-10384250)
chr6 (97-224)||(684971-685093)
chr6 (97-224)||(13853160-13853282)
chr6 (97-224)||(17853661-17853783)
chr6 (178-311)||(1375860-1375992)
chr6 (178-311)||(1383608-1383740)
chr6 (101-254)||(3105626-3105773)
chr6 (187-256)||(9546514-9546582)
chr6 (181-286)||(17312275-17312380)
chr6 (187-247)||(3012016-3012075)
chr6 (187-247)||(9515503-9515563)
chr6 (79-147)||(9899195-9899263)
chr6 (79-147)||(9899441-9899509)
chr6 (97-140)||(9546428-9546471)
chr6 (101-256)||(12240623-12240773)
chr6 (97-224)||(22568937-22569059)
chr6 (97-147)||(2882901-2882951)
chr6 (97-147)||(11362026-11362076)
chr6 (97-147)||(22568781-22568831)
chr6 (79-144)||(1925400-1925465)
chr6 (187-224)||(8487965-8488002)
chr6 (187-224)||(13178326-13178363)
chr6 (187-224)||(20027947-20027984)
chr6 (187-224)||(24325095-24325132)
chr6 (187-224)||(25026078-25026115)
chr6 (78-147)||(28852187-28852256)
chr6 (71-147)||(9220095-9220171)
chr6 (79-147)||(9546657-9546725)
chr6 (103-147)||(13853388-13853432)
chr6 (79-147)||(17853889-17853957)
chr6 (101-145)||(20028021-20028065)
chr6 (79-147)||(21926064-21926132)
[»] chr7 (54 HSPs)
chr7 (187-318)||(41316973-41317103)
chr7 (178-308)||(44533586-44533716)
chr7 (70-256)||(42391287-42391467)
chr7 (181-317)||(43268011-43268146)
chr7 (97-224)||(11338066-11338188)
chr7 (189-279)||(37900544-37900634)
chr7 (189-279)||(37907055-37907145)
chr7 (97-254)||(24331397-24331548)
chr7 (70-147)||(41922273-41922350)
chr7 (79-224)||(45055322-45055462)
chr7 (67-147)||(7172919-7172999)
chr7 (78-254)||(20121350-20121520)
chr7 (78-254)||(41857140-41857310)
chr7 (97-256)||(21733086-21733239)
chr7 (187-318)||(41054674-41054805)
chr7 (187-254)||(47221852-47221918)
chr7 (78-164)||(28588316-28588402)
chr7 (187-317)||(32064493-32064621)
chr7 (187-256)||(2699760-2699828)
chr7 (187-256)||(31283257-31283325)
chr7 (78-147)||(44458030-44458099)
chr7 (70-147)||(45055568-45055645)
chr7 (79-147)||(12423845-12423913)
chr7 (79-147)||(38495160-38495228)
chr7 (79-147)||(43575296-43575364)
chr7 (97-140)||(8522565-8522608)
chr7 (187-254)||(41749725-41749791)
chr7 (187-254)||(44457887-44457953)
chr7 (97-147)||(7149309-7149359)
chr7 (97-147)||(8805762-8805812)
chr7 (97-147)||(8805990-8806040)
chr7 (97-147)||(8949310-8949360)
chr7 (187-317)||(8949395-8949524)
chr7 (97-155)||(25436747-25436805)
chr7 (97-147)||(34287763-34287813)
chr7 (97-147)||(38494932-38494982)
chr7 (81-147)||(45062308-45062374)
chr7 (97-147)||(47221725-47221775)
chr7 (79-140)||(8522324-8522385)
chr7 (187-224)||(8805847-8805884)
chr7 (78-147)||(11337891-11337960)
chr7 (187-224)||(17173192-17173229)
chr7 (81-130)||(31115839-31115888)
chr7 (187-224)||(31813904-31813941)
chr7 (97-146)||(43575080-43575129)
chr7 (98-147)||(45867691-45867740)
chr7 (187-224)||(46738438-46738475)
chr7 (78-147)||(47221941-47222010)
chr7 (187-224)||(49114445-49114482)
chr7 (269-317)||(10543595-10543643)
chr7 (76-140)||(24331633-24331697)
chr7 (178-226)||(45533809-45533857)
chr7 (79-147)||(45867445-45867513)
chr7 (71-147)||(46426653-46426729)
[»] chr5 (34 HSPs)
chr5 (181-317)||(12875748-12875884)
chr5 (71-256)||(7601736-7601915)
chr5 (179-249)||(13675812-13675882)
chr5 (78-164)||(14871733-14871819)
chr5 (97-147)||(33381447-33381497)
chr5 (187-256)||(2467202-2467270)
chr5 (187-256)||(13577406-13577474)
chr5 (78-147)||(16737049-16737118)
chr5 (78-147)||(19131116-19131185)
chr5 (78-147)||(33429779-33429848)
chr5 (78-147)||(39589614-39589683)
chr5 (100-224)||(1099066-1099185)
chr5 (79-147)||(1643539-1643607)
chr5 (79-147)||(16736801-16736869)
chr5 (178-222)||(26349238-26349282)
chr5 (97-140)||(30129493-30129536)
chr5 (187-254)||(39589721-39589787)
chr5 (187-254)||(42610884-42610950)
chr5 (97-147)||(7601611-7601661)
chr5 (97-147)||(19130888-19130938)
chr5 (102-224)||(33429556-33429673)
chr5 (78-147)||(2426228-2426297)
chr5 (187-224)||(3279362-3279399)
chr5 (187-224)||(13697492-13697529)
chr5 (187-224)||(14871837-14871874)
chr5 (187-224)||(16736906-16736943)
chr5 (187-224)||(18707373-18707410)
chr5 (187-224)||(31618341-31618378)
chr5 (187-224)||(32772165-32772202)
chr5 (98-147)||(33381674-33381723)
chr5 (79-140)||(40952067-40952128)
chr5 (187-224)||(40952171-40952208)
chr5 (79-147)||(31485957-31486025)
chr5 (79-147)||(32771991-32772059)
[»] chr4 (45 HSPs)
chr4 (470-538)||(12725345-12725413)
chr4 (76-255)||(52538023-52538196)
chr4 (78-256)||(32922066-32922238)
chr4 (178-318)||(33815346-33815486)
chr4 (234-317)||(17040057-17040140)
chr4 (188-278)||(47122541-47122631)
chr4 (187-224)||(8358546-8358583)
chr4 (187-308)||(30534629-30534750)
chr4 (79-256)||(52654075-52654246)
chr4 (79-147)||(10993625-10993693)
chr4 (79-147)||(16530318-16530386)
chr4 (189-317)||(23962952-23963079)
chr4 (330-373)||(12725227-12725270)
chr4 (79-254)||(16019957-16020126)
chr4 (97-255)||(7067386-7067538)
chr4 (99-169)||(46648089-46648159)
chr4 (187-256)||(46689300-46689368)
chr4 (79-147)||(9902653-9902721)
chr4 (79-147)||(17040156-17040224)
chr4 (79-147)||(20984160-20984228)
chr4 (79-147)||(32922313-32922381)
chr4 (79-147)||(39791917-39791985)
chr4 (181-256)||(18635983-18636057)
chr4 (277-324)||(35222021-35222068)
chr4 (97-140)||(39792172-39792215)
chr4 (77-140)||(52653929-52653992)
chr4 (266-317)||(54997038-54997089)
chr4 (81-147)||(44551161-44551227)
chr4 (97-147)||(52537897-52537947)
chr4 (98-147)||(9902902-9902951)
chr4 (187-224)||(17362472-17362509)
chr4 (187-224)||(22539861-22539898)
chr4 (187-256)||(24270505-24270573)
chr4 (187-224)||(25331991-25332028)
chr4 (187-224)||(26842903-26842940)
chr4 (187-256)||(26886753-26886821)
chr4 (71-140)||(35130783-35130852)
chr4 (98-147)||(35131042-35131091)
chr4 (187-224)||(41935596-41935633)
chr4 (200-285)||(49860772-49860856)
chr4 (187-251)||(2272580-2272644)
chr4 (79-127)||(25331815-25331863)
chr4 (180-224)||(30637042-30637086)
chr4 (79-147)||(32488830-32488898)
chr4 (187-255)||(49387327-49387394)
[»] chr3 (43 HSPs)
chr3 (470-538)||(34280094-34280162)
chr3 (79-147)||(25061301-25061369)
chr3 (79-147)||(31574499-31574567)
chr3 (76-147)||(14463369-14463440)
chr3 (80-147)||(32809155-32809222)
chr3 (97-256)||(50710721-50710874)
chr3 (98-224)||(11221166-11221287)
chr3 (330-372)||(34280231-34280273)
chr3 (97-147)||(35415488-35415538)
chr3 (78-224)||(44664620-44664761)
chr3 (178-224)||(48738173-48738219)
chr3 (78-147)||(20209149-20209218)
chr3 (69-130)||(25061541-25061602)
chr3 (79-164)||(32809349-32809433)
chr3 (187-256)||(45214520-45214588)
chr3 (79-224)||(46292582-46292722)
chr3 (180-292)||(2397882-2397993)
chr3 (79-147)||(50711241-50711309)
chr3 (97-224)||(13997091-13997213)
chr3 (187-254)||(25061445-25061511)
chr3 (97-224)||(29434319-29434441)
chr3 (69-147)||(2862692-2862769)
chr3 (178-260)||(11471860-11471941)
chr3 (187-249)||(29560440-29560502)
chr3 (15-77)||(34281175-34281237)
chr3 (78-224)||(38675155-38675296)
chr3 (97-147)||(44920144-44920194)
chr3 (97-147)||(45171596-45171646)
chr3 (98-147)||(2579114-2579163)
chr3 (187-256)||(2773299-2773367)
chr3 (187-224)||(15543102-15543139)
chr3 (187-256)||(18168857-18168925)
chr3 (78-147)||(18169000-18169069)
chr3 (187-256)||(28843835-28843903)
chr3 (187-224)||(44920001-44920038)
chr3 (78-147)||(49002236-49002305)
chr3 (187-224)||(49002409-49002446)
chr3 (79-147)||(50710892-50710961)
chr3 (78-147)||(50711102-50711171)
chr3 (188-260)||(11839287-11839358)
chr3 (79-147)||(28843978-28844046)
chr3 (187-223)||(39778454-39778490)
chr3 (187-255)||(44036789-44036856)
[»] scaffold0009 (2 HSPs)
scaffold0009 (187-254)||(258900-258966)
scaffold0009 (98-147)||(258774-258823)
[»] scaffold0592 (1 HSPs)
scaffold0592 (187-224)||(8562-8599)
[»] scaffold0119 (1 HSPs)
scaffold0119 (187-224)||(41382-41419)
[»] scaffold0029 (1 HSPs)
scaffold0029 (79-224)||(73547-73687)
[»] scaffold0003 (1 HSPs)
scaffold0003 (187-224)||(323587-323624)


Alignment Details
Target: chr1 (Bit Score: 412; Significance: 0; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 6 - 542
Target Start/End: Original strand, 30026890 - 30027408
Alignment:
Q  6 cattaactacagtcaaatttagcttgaggagcatcacaaaatagtttgaccatattgaaatttttaaaataatggcaaaattacacctgcggtcccttaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30026890 cattaactacagtcaaatttagcttgaggagcatcacaaaatagtttgaccatattgaaatttttaaaataatggcaaaattacacccgtggtcccttaa 30026989  T
Q  106 cttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaaatct 205  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30026990 cttaatttcagataacgatttggtctgttatctttatttcattccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaaatct 30027089  T
Q  206 aagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccatatgca 305  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  30027090 aaaattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcatagagaaataaaaccatagatttgaagcttgatactccttatgca 30027189  T
Q  306 aatggaccaaaataacaaagataggtttctttccctttgcaacaagttgataacctaattaacaaaaaccatgattgaattnnnnnnnntagagatttga 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        || ||||||||    
T  30027190 aatggaccaaaataacaaagataggtttctttccctttgcaacaagttgataacctaattaacaaaaaccatgattgaatt-aaaaaaatatagatttga 30027288  T
Q  406 tataaaattatcaaaattttagaacnnnnnnnnnnnnggattatttagtattttggcgaatggcactgacttgaatcaactaccatacggtaggaataat 505  Q
    |||||||||||||||||||||||||                 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30027289 tataaaattatcaaaattttagaac-----------------aattagtattttggcgaatggcactgacttgaatcaactaccatacggtaggaataat 30027371  T
Q  506 cagaagcatcggttccagatggtcttcccaacgttga 542  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30027372 cagaagcatcggttccagatggtcttcccaatgttga 30027408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 249
Target Start/End: Complemental strand, 29570853 - 29570686
Alignment:
Q  77 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat-gccattttgattcttttagtctgtttgc 175  Q
    |||| |||||||||| || ||||||| ||||| ||||||| |||| ||||||||   ||||||| |||||| || |||||| ||||||| |||  |||||    
T  29570853 atggaaaaattacacatgtggtccctaaactttatttcagataacaatttggtcctgtatctttttttcattgcaattttg-ttcttttggtccatttgc 29570755  T
Q  176 aatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 249  Q
    |     |||  |||||||||||||||||| ||||||||||||||||||| | ||||  ||||||||||||||||    
T  29570754 a-----tatgtattttcaagcttcaaatcaaagattcatatgcaaacataggtgaaagaccatagatttgaaga 29570686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 45682548 - 45682609
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaag 248  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  45682548 attttcaagctttaaatataagattcatatgcaaacatggatgaaagaccatagatttgaag 45682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 317
Target Start/End: Complemental strand, 5586807 - 5586569
Alignment:
Q  73 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtt 172  Q
    ||||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||    
T  5586807 aataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt 5586708  T
Q  173 tgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaa 272  Q
         | |||||  ||||||||||||||||| ||| |||| ||||||||||| |   ||| | |||||||||||||||||||||  || |   |||||||    
T  5586707 -----ttcatatacattttcaagcttcaaatttaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaagaccataagaaaataaa 5586614  T
Q  273 accatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    | |||  |||| |||||| ||| | |||||| ||||||| |||||    
T  5586613 atcatgaattttaagcttaataattcatatgtaaatggatcaaaa 5586569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 256
Target Start/End: Complemental strand, 9877699 - 9877546
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||  |||  ||     | |||||  ||||||||||    
T  9877699 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttatgtccatt-----ttcatatacattttcaagc 9877605  T
Q  197 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  9877604 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 9877546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 10296610 - 10296732
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || ||||||  |||| |||  ||     | |||||  ||||||||||    
T  10296610 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcatttttgtccatt-----ttcatatgcattttcaagc 10296704  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  10296705 ttcaaatctaatattcttatgcaaacat 10296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 40934714 - 40934592
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  40934714 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 40934620  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  40934619 ttcaaatctaatattcttatgcaaacat 40934592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 17191189 - 17191263
Alignment:
Q  70 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 144  Q
    |||||| | ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  17191189 taaaattaaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttattt 17191263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 4695258 - 4695110
Alignment:
Q  71 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctg 170  Q
    |||||| |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| ||||     
T  4695258 aaaatattggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcta 4695159  T
Q  171 tttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||     |  ||||  ||||||||| ||||||||||| |||| |||||||||||    
T  4695158 tt-----tttatatacattttcaagtttcaaatctaatattcttatgcaaacat 4695110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 26095700 - 26095632
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||||||||||    
T  26095700 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactgaaag 26095632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 40770459 - 40770386
Alignment:
Q  74 ataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||| |||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  40770459 ataatggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 40770386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 24234633 - 24234707
Alignment:
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
    ||||| |||||||||||||||||||| | |||| ||||||||||| | ||||| |||||| ||||||||| |||||    
T  24234633 catatggattttcaagcttcaaatcttatattcttatgcaaacatagatgaag-accataaatttgaagattgaaa 24234707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 1501622 - 1501690
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  ||| || |||||||||||||| ||||||    
T  1501622 attttcaagcttcaaatctaatattcttatgcaaacatagacgaa-aatcatagatttgaagattgaaag 1501690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 8853095 - 8853163
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  8853095 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtct-ttatctttttttcat 8853163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 28554189 - 28554258
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  28554189 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 28554258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 29570550 - 29570611
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    |||||||||||| ||| ||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  29570550 ggcaaaattacatctgtggtcctttaacttaatttcagataatgatttggtcctttatcttt 29570611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 31289253 - 31289322
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  31289253 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 31289322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 5618071 - 5618139
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  5618071 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 5618139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25012961 - 25012894
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  25012961 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtct-ttatctttttttcat 25012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 34480184 - 34480252
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34480184 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 34480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 44344127 - 44344194
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
    ||||||||||||||||||| | |||| ||||||||||| |  |||| | ||||||||||||||||||||    
T  44344127 attttcaagcttcaaatcttatattcttatgcaaacatagacgaag-atcatagatttgaagactgaaa 44344194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 45286232 - 45286300
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||| ||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  45286232 ggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttatctttttttcat 45286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 45682595 - 45682639
Alignment:
Q  273 accatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    |||||||||||||||||||| | |||||||||| |||||||||||    
T  45682595 accatagatttgaagcttgaaattccatatgcacatggaccaaaa 45682639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 49021980 - 49021912
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  49021980 ggcaaaattacactttttgtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 49021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 8641048 - 8641114
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| |||| |||||| || || | | |||||||||||||||||||    
T  8641048 attttcaagcttcaaatctaatattcttatgaaaacatagccgatg-atcatagatttgaagactgaa 8641114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 12649924 - 12650062
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgc 180  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |      
T  12649924 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttt 12650018  T
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||  ||||||||||||||||||||| |||| |||||||||||    
T  12650019 atatacattttcaagcttcaaatctaatattcttatgcaaacat 12650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 12752184 - 12752258
Alignment:
Q  209 attcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttg 284  Q
    |||||||||||||||| | ||||| |||||| ||| ||||||| | |||||| ||| |||||||||| ||||||||    
T  12752184 attcatatgcaaacatag-tgaaggaccataaattagaagactaagagctcatagaaaaataaaaccttagatttg 12752258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 32694600 - 32694482
Alignment:
Q  101 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 200  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||||||    
T  32694600 cttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagcttca 32694506  T
Q  201 aatctaagattcatatgcaaacat 224  Q
    ||||||| |||| |||||||||||    
T  32694505 aatctaatattcttatgcaaacat 32694482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 5618367 - 5618317
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  5618367 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 5618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 17504339 - 17504289
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  17504339 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 17504289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 49021685 - 49021735
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  49021685 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 49021735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 6488871 - 6488932
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  6488871 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatcttt 6488932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 7349769 - 7349838
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  7349769 tggcaaaattacacttttagtcccttaacttaatttcagataacactttggtcctttatctttttttcat 7349838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 8828682 - 8828719
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8828682 attttcaagcttcaaatctaatattcttatgcaaacat 8828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 17504146 - 17504183
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17504146 attttcaagcttcaaatctaatattcttatgcaaacat 17504183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 28552196 - 28552135
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccata 239  Q
    ||||||| |||||||||||  ||||||||| ||||||||| |||||||  ||||| ||||||    
T  28552196 tgcatatagattttcaagcagcaaatctaaaattcatatgaaaacatgattgaaggaccata 28552135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 29570731 - 29570776
Alignment:
Q  279 gatttgaagcttgatactccatatgcaaatggaccaaaataacaaa 324  Q
    |||||||||||||| | | |||||||||||||||||||| ||||||    
T  29570731 gatttgaagcttgaaaatacatatgcaaatggaccaaaagaacaaa 29570776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 33471622 - 33471585
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  33471622 attttcaagcttcaaatctaatattcttatgcaaacat 33471585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 34704474 - 34704531
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagattt 244  Q
    |||||||||  |||||||||| ||||||||| |||||||  |||||||||||| ||||    
T  34704474 attttcaagtatcaaatctaaaattcatatgaaaacatgaatgaagaaccatacattt 34704531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 35521324 - 35521361
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  35521324 attttcaagcttcaaatctaatattcttatgcaaacat 35521361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 39672835 - 39672904
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  39672835 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcat 39672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 44344023 - 44344084
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||| |   ||||||||||||||||||||||||| | ||||||  ||||||||    
T  44344023 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaaattggtcctttatcttt 44344084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 46283613 - 46283576
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  46283613 attttcaagcttcaaatctaatattcttatgcaaacat 46283576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 730799 - 730867
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||||||| | || |||  |||||||| ||||||    
T  730799 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaacttagtcctttatctttttttcat 730867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 5586487 - 5586555
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  5586487 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 5586555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 8853409 - 8853341
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| ||| ||||||    
T  8853409 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttttttcat 8853341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 26095506 - 26095554
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttc 145  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  26095506 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttc 26095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 27065248 - 27065284
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaaca 223  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  27065248 attttcaagcttcaaatctaatattcttatgcaaaca 27065284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 474777 - 474648
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||  ||||||||||||    
T  474777 tgcatatgaattttcaagcttcaaatttaagattcatatgcaaacatgggtgaaggaccatagatttgaagactgagaactcacaggaaaataaaaccat 474678  T
Q  278 agatttgaagcttgatactccatatgcaaa 307  Q
     |||||||||||||| | | ||||||||||    
T  474677 cgatttgaagcttgaaaattcatatgcaaa 474648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 22399109 - 22399239
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcac-agagaaataaaaccatagatttga 285  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||  |||||| |||| || ||||| || |||| ||| || |||||| ||| ||||||    
T  22399109 attttcaagcttcaaatctaagattcaaatgtaaacataggtgaaagaccataaattttaaaactgagaggtcactaga-aattaaaacaatatatttga 22399207  T
Q  286 agcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||| | | |||||||||||| |||||||    
T  22399208 agcttgaaaattcatatgcaaatgtaccaaaa 22399239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 317
Target Start/End: Complemental strand, 10714322 - 10714090
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  10714322 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----t 10714228  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccata 278  Q
     |||||  ||||||||||||||||| ||| |||| ||||||||||| |   ||| | |||||||||||||||||||||  || |   |||||||| |||     
T  10714227 tcatatacattttcaagcttcaaatttaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaagaccataagaaaataaaatcatg 10714129  T
Q  279 gatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
     |||| |||||| ||| | |||||| ||||||| |||||    
T  10714128 aattttaagcttaataattcatatgtaaatggatcaaaa 10714090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 35412192 - 35412051
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  35412192 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 35412098  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    | |||||  ||||||||||||||||||||| |||| |||||||||||    
T  35412097 ttcatatacattttcaagcttcaaatctaatattcttatgcaaacat 35412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 256
Target Start/End: Complemental strand, 44490618 - 44490447
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   |||||||||| ||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||      
T  44490618 ggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-- 44490521  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
       |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  44490520 ---tatatattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 44490447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 318
Target Start/End: Complemental strand, 23926686 - 23926472
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 197  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||    
T  23926686 tcccttaacttaatttcaggtaacaatttgatcttttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagct 23926592  T
Q  198 tcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactc 297  Q
    |||||||||| |||| ||||||||||| |  | || | |||||||||||||| ||||||  || | | |||||||| |||  |||| |||||| | | |     
T  23926591 tcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagattgaaagaccataaaaaaataaaatcatgaattttaagcttaaaaatt 23926493  T
Q  298 catatgcaaatggaccaaaat 318  Q
    |||||| |||||||| |||||    
T  23926492 catatgaaaatggacaaaaat 23926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 341330 - 341452
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  341330 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 341424  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  341425 ttcaaatctaatattcttatgcaaacat 341452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 26499727 - 26499657
Alignment:
Q  77 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  26499727 atggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 26499657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 9912123 - 9912055
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  9912123 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 9912055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 10192084 - 10192153
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggt-ctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||| || |||||||| ||||||    
T  10192084 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtccttttatctttttttcat 10192153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 42950730 - 42950662
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  42950730 attttcaagcttcaaatctaatattcttatgcaaacatagaag-aggatcatagatttgaagactgaaag 42950662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 30488394 - 30488326
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  30488394 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 30488326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 256
Target Start/End: Complemental strand, 33274710 - 33274540
Alignment:
Q  80 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatg 179  Q
    |||||||||||| |   ||||||||||||||||| ||||||| ||||||||  |||||||  ||||||  || |||| |||||||  ||  ||     |     
T  33274710 gcaaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatcttcttttcatttcaatttggttctttttatccatt-----tt 33274616  T
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    |||||  ||||||||| ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  33274615 catatacattttcaagtttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 33274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 1650521 - 1650588
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 164  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| |||||||    
T  1650521 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttctttt 1650588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 28789180 - 28789113
Alignment:
Q  80 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  28789180 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 28789113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 30488074 - 30488220
Alignment:
Q  73 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtt 172  Q
    ||||| ||||||||||||| |    |||||||||||||||||||||||| ||||| ||  |||||||| ||||||  || |||| | ||||| |||  ||    
T  30488074 aataaaggcaaaattacacttttaatcccttaacttaatttcaggtaacaatttgatcatttatctttttttcatttcaatttggtcctttttgtccatt 30488173  T
Q  173 tgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
         |  ||||  ||||||||||||||||||||| |||| |||||||||||    
T  30488174 -----tttatatacattttcaagcttcaaatctaatattcttatgcaaacat 30488220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 33274413 - 33274460
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 144  Q
    |||||||||||||||||||||||||  ||| |||| ||||||||||||    
T  33274413 gtcccttaacttaatttcaggtaacagtttagtcttttatctttattt 33274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 41537497 - 41537532
Alignment:
Q  96 ggtcccttaacttaatttcaggtaacgatttggtct 131  Q
    |||||||||||||||||||||||||| |||||||||    
T  41537497 ggtcccttaacttaatttcaggtaacaatttggtct 41537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 1479028 - 1479118
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 169  Q
    ||||||||||||| |   || |||||||||||||||||||||  ||||||||  |||||||| ||||||  || |||||| ||||| ||||    
T  1479028 ggcaaaattacacttttagttccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaatttgatactttttgtct 1479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 3888889 - 3888939
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||| ||| |||||||| ||||||    
T  3888889 gtcccttaacttaatttcaggtaacagtttgatcttttatctttttttcat 3888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 29154359 - 29154309
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||| |||||||  |||||||| |||||||| ||||||    
T  29154359 gtcccttaacttaattttaggtaacagtttggtcttttatctttttttcat 29154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 35411871 - 35411945
Alignment:
Q  73 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||| |||||||||||||| |   |||||||||||||||||| ||||||  |||||||  |||||||| ||||||    
T  35411871 aatattggcaaaattacacttttagtcccttaacttaatttctggtaactgtttggtcctttatctttttttcat 35411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 41537636 - 41537682
Alignment:
Q  246 aagactgaaagctcacagagaaataaaaccatagatttgaagcttga 292  Q
    |||||||| ||||||| | |||| |||||||||||||||||||||||    
T  41537636 aagactgagagctcactgcgaaagaaaaccatagatttgaagcttga 41537682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 1270320 - 1270283
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  1270320 attttcaagcttcaaatctaatattcttatgcaaacat 1270283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 3322204 - 3322167
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3322204 attttcaagcttcaaatctaatattcttatgcaaacat 3322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 3888974 - 3889011
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3888974 attttcaagcttcaaatctaatattcttatgcaaacat 3889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 9027128 - 9027165
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  9027128 attttcaagcttcaaatctaatattcttatgcaaacat 9027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 10192296 - 10192259
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  10192296 attttcaagcttcaaatctaatattcttatgcaaacat 10192259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 10714007 - 10714076
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  10714007 tggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 10714076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 11724720 - 11724757
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  11724720 attttcaagcttcaaatctaatattcttatgcaaacat 11724757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 16350695 - 16350732
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  16350695 attttcaagcttcaaatctaatattcttatgcaaacat 16350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 17549280 - 17549243
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17549280 attttcaagcttcaaatctaatattcttatgcaaacat 17549243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 22196134 - 22196097
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22196134 attttcaagcttcaaatctaatattcttatgcaaacat 22196097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 22486207 - 22486170
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22486207 attttcaagcttcaaatctaatattcttatgcaaacat 22486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 22899122 - 22899159
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22899122 attttcaagcttcaaatctaatattcttatgcaaacat 22899159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 26499514 - 26499551
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  26499514 attttcaagcttcaaatctaatattcttatgcaaacat 26499551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 29154064 - 29154125
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||| |   |||||||||||||||||||| |||| ||||||||  ||||||||    
T  29154064 ggcaaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatcttt 29154125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 29175135 - 29175098
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  29175135 attttcaagcttcaaatctaatattcttatgcaaacat 29175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 1650817 - 1650749
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  1650817 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagttttgtcctttatctttttttcat 1650749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 42950823 - 42950755
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||| |||||||||||||||  |||||||  |||||||| ||||||    
T  42950823 ggcaaaattacacttttagtcccttaatttaatttcaggtaacagtttggtcatttatctttttttcat 42950755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 101 - 317
Target Start/End: Complemental strand, 24566712 - 24566501
Alignment:
Q  101 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 200  Q
    |||||||| |||||||||||||||||   || |||||||| | | | | ||||||| | ||||| ||| |||||||     ||| ||| |||||| ||||    
T  24566712 cttaacttgatttcaggtaacgattttaccttttatctttctcttacgtcattttggtccttttggtccgtttgca-----tatggatgttcaagtttca 24566618  T
Q  201 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccat 300  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||| |||| |||||||||  |||||||| ||||||||| |||||| | | |||||    
T  24566617 aatctaatattcatatacaaacatggctgaaggaccataaatttgaaggctgagagctcacaggaaaataaaatcatagatttaaagcttaaaaatccat 24566518  T
Q  301 atgcaaatggaccaaaa 317  Q
    |||||||||||| ||||    
T  24566517 atgcaaatggactaaaa 24566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 43497303 - 43497439
Alignment:
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 279  Q
    ||||| |||||||||||||||||| | | |||| ||||||||||| | |||||| ||||| ||||||||| |||||   || | | ||||||||||||      
T  43497303 catatagattttcaagcttcaaatatgatattcttatgcaaacatagatgaaga-ccataaatttgaagattgaaatgccataaaaaaataaaaccatga 43497401  T
Q  280 atttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||| | | ||||||||||||||||||||    
T  43497402 atttgaagcttgaaaattcatatgcaaatggaccaaaa 43497439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 79 - 254
Target Start/End: Original strand, 148293 - 148462
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |  |||||||||||||||||| ||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  148293 ggcaaaattacacttttggtcccttaacttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 148387  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
     |||||  ||||||||||||||||| ||| |||| ||||||||||| | || || | |||||||||||||||||||    
T  148388 tcatatacattttcaagcttcaaatttaatattcttatgcaaacatagatg-aggatcatagatttgaagactgaa 148462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 26187346 - 26187210
Alignment:
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 279  Q
    ||||| |||||||||||||||  | ||| |||| ||||||||||| |  ||||| ||||||||||||||| || |||  || | | ||||||||||||      
T  26187346 catatggattttcaagcttcatttttaatattcttatgcaaacatagaagaaga-ccatagatttgaagattggaaggccataaaaaaataaaaccatga 26187248  T
Q  280 atttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||| | | |||||| |||||||||||||    
T  26187247 atttgaagcttgaaaattcatatgtaaatggaccaaaa 26187210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 99 - 317
Target Start/End: Original strand, 12649500 - 12649712
Alignment:
Q  99 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagctt 198  Q
    |||||||||| |||| ||||||| ||||||||| |||||||| ||||||   | |||  | ||||| |||| ||| ||     ||| |||||||||||||    
T  12649500 cccttaactttattttaggtaacaatttggtcttttatctttttttcatttaaattttttccttttggtctattttca-----tatggattttcaagctt 12649594  T
Q  199 caaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactcc 298  Q
    ||||||||| |||| ||||||||||| | || || |||| | |||| |||| ||||||  || |   ||||||||||||  |||||||| |||| | | |    
T  12649595 caaatctaatattcttatgcaaacatagatggag-accacatatttaaagattgaaagaccataagaaaataaaaccatgaatttgaagtttgaaaattc 12649693  T
Q  299 atatgcaaatggaccaaaa 317  Q
    ||||| |||||||||||||    
T  12649694 atatgaaaatggaccaaaa 12649712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 1802691 - 1802756
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactg 252  Q
    ||||||||| ||||||| ||||||||||||| ||||||   |||| ||||||||||||||||||||    
T  1802691 attttcaagtttcaaatttaagattcatatgtaaacataagtgaaaaaccatagatttgaagactg 1802756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 26938204 - 26938254
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  26938204 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 26938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 256
Target Start/End: Complemental strand, 27713079 - 27712907
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  27713079 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 27712985  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    | |||||  |||||||||||||||||  || |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  27712984 ttcatatacattttcaagcttcaaattaaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 27712907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 32063484 - 32063542
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccatttt 155  Q
    |||||||||||||||||||| ||||||||| |||| |||||||| ||| ||| ||||||    
T  32063484 gtcccttaacttaatttcagataacgatttcgtcttttatctttgtttaatgtcatttt 32063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 33278934 - 33279003
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   ||| ||||||||||||||||||||| ||||||||| ||| |||| ||||||    
T  33278934 tggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcttttacctttttttcat 33279003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 34199150 - 34199081
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| | | ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  34199150 tggcaaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 34199081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 39198720 - 39198788
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  39198720 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 39198788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 32478083 - 32478142
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 247  Q
    ||||| || |||||| |||||||||||||||||||||| | |||| |||||||||||||||    
T  32478083 attttaaaacttcaattctaagattcatatgcaaacatag-tgaaaaaccatagatttgaa 32478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 33279252 - 33279184
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33279252 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33279184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 41617036 - 41617116
Alignment:
Q  67 ttttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||| |   ||| |||||||||||||||| ||||  ||||||   |||||||| ||||||    
T  41617036 ttttaaaataatggcaaaattacacttttagtctcttaacttaatttcagataacagtttggttctttatctttttttcat 41617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 2241604 - 2241553
Alignment:
Q  266 aaataaaaccatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||  ||||||||||||| | |||||| |||||||||||||||    
T  2241604 aaataaaaccatgaatttgaagcttgaaaatccatacgcaaatggaccaaaa 2241553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 29596403 - 29596470
Alignment:
Q  80 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  29596403 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 29596470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 256
Target Start/End: Original strand, 30253628 - 30253797
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgc 180  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |    
T  30253628 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----ttc 30253722  T
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||  |||||||||||||||||  || |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  30253723 atatacattttcaagcttcaaattaaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 30253797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 17495019 - 17494969
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  17495019 gtcccttaacttaatttcaggtaacattttggtcatttatctttttttcat 17494969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 21660726 - 21660792
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttc 145  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  21660726 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttc 21660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 28828218 - 28828284
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||| |   ||||||||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  28828218 caaaattacacttttagtcccttaacttaatttcaagtaacaatttggtcctttatctttttttcat 28828284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 33526958 - 33527008
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||| ||||  |||||||| |||||||| ||||||    
T  33526958 gtcccttaacttaatttcagataacagtttggtcttttatctttttttcat 33527008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 34632521 - 34632471
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34632521 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 34632471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 36556831 - 36556781
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  36556831 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 36556781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 8156919 - 8156882
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8156919 attttcaagcttcaaatctaatattcttatgcaaacat 8156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 28828539 - 28828462
Alignment:
Q  70 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||| |   |||||||||||| |||| ||||||  |||| |||  |||||||| ||||||    
T  28828539 taaaataatggcaaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatctttttttcat 28828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 33279147 - 33279110
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  33279147 attttcaagcttcaaatctaatattcttatgcaaacat 33279110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 41617251 - 41617183
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  41617251 attttcaagtttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 41617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 42684891 - 42684928
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  42684891 attttcaagcttcaaatctaatattcttatgcaaacat 42684928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 39198610 - 39198666
Alignment:
Q  74 ataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 130  Q
    |||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||    
T  39198610 ataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtc 39198666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 41617334 - 41617286
Alignment:
Q  99 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  41617334 cccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 41617286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 34493804 - 34493665
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    |||||||  |||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||||| || || || ||||||||| |||||||||| ||    
T  34493804 tgcatatgaattttcaaacttcacatcaaagattcatatgcaatcatggatgaagaaccatagatttaaataccgacagctcacagggaaataaaactat 34493705  T
Q  278 agatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||||| | ||||||| |||| |||||||||    
T  34493704 agatttgaagcttgaaaatccatattcaaacggaccaaaa 34493665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 1368266 - 1368396
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    |||||||||||| ||||||||||||||| |  |||||||  ||||  | |||||||||||||| ||  || |||||   |||||||| ||||||||| ||    
T  1368266 attttcaagctttaaatctaagattcatgtcaaaacatgaatgaaagaacatagatttgaagattgtgaggtcacaagaaaataaaatcatagatttaaa 1368365  T
Q  287 gcttgatactccatatgcaaatggaccaaaat 318  Q
    |||||| | ||||||||||||||||| |||||    
T  1368366 gcttga-aatccatatgcaaatggacgaaaat 1368396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 8129828 - 8129676
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 197  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  |||||||||||    
T  8129828 tcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagct 8129734  T
Q  198 tcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    |||||||||| |||| ||||||||||| |  | |||| |||||||||||||||||||||    
T  8129733 tcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactgaaag 8129676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 2316803 - 2316663
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||     |    
T  2316803 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccttt-----t 2316709  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
     |||||  ||||||||||||||||||||| |||| |||||||||||    
T  2316708 tcatatacattttcaagcttcaaatctaatattcttatgcaaacat 2316663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 10384191 - 10384250
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttga 246  Q
    ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  10384191 attttcaagtttcaaatctaatattcatatgaaaacatgggtgaagaaccatacatttga 10384250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 684971 - 685093
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||| |||| ||||||||  |||||||| ||||||  || |||| ||||||| |||  ||     |  ||||  ||||||||||    
T  684971 gtcccttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggttctttttgtccatt-----tttatatacattttcaagc 685065  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  685066 ttcaaatctaatattcttatgcaaacat 685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 13853160 - 13853282
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  ||||||||||    
T  13853160 gtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagc 13853254  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  13853255 ttcaaatctaatattcttatgcaaacat 13853282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 17853661 - 17853783
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||| |||||||||||||||  |||||||| |||||||| ||||||  || |||| | ||||| |||  |||  |     |||  ||||||||||    
T  17853661 gtcccttaaattaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccattttta-----tatacattttcaagc 17853755  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| ||||||||||||||||    
T  17853756 ttcaaatctaatattcatatgcaaacat 17853783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 1375860 - 1375992
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    |||||||  ||||||||| || ||||||||| |||||| |||||||||  ||||  | |||||||||||||| ||| || |||||   || |||| ||||    
T  1375860 tgcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattgagaggtcacatgaaagtaaagccat 1375959  T
Q  278 agatttgaagcttgatactccatatgcaaatgga 311  Q
    |||| | |||||||| | ||| ||||||||||||    
T  1375960 agatgtaaagcttga-aatccgtatgcaaatgga 1375992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 311
Target Start/End: Original strand, 1383608 - 1383740
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    |||||||  ||||||||| || ||||||||| |||||| |||||||||  ||||  | |||||||||||||| ||| || |||||   || |||| ||||    
T  1383608 tgcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattgagaggtcacatgaaagtaaagccat 1383707  T
Q  278 agatttgaagcttgatactccatatgcaaatgga 311  Q
    |||| | |||||||| | ||| ||||||||||||    
T  1383708 agatgtaaagcttga-aatccgtatgcaaatgga 1383740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 3105626 - 3105773
Alignment:
Q  101 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 200  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||||||    
T  3105626 cttaacttaatttcaggtaactgtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagcttca 3105720  T
Q  201 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  3105721 aatctaacattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 3105773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 9546514 - 9546582
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  9546514 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 9546582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 17312275 - 17312380
Alignment:
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccataga 280  Q
    |||| ||||||||||| |  ||| ||| | ||||||| |||||||  |||||||||||||||||||| | | | |||||| |  |||||||||||| |||    
T  17312275 atatggattttcaagcattgaatataaaactcatatgaaaacatgagtgaagaaccatagatttgaacattaagagctcaaattgaaataaaaccaaaga 17312374  T
Q  281 tttgaa 286  Q
    ||||||    
T  17312375 tttgaa 17312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 3012016 - 3012075
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 247  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||||| | ||||||||||||    
T  3012016 attttcaagcttcaaatctaatattcttatgcaaacatagatgaag-atcatagatttgaa 3012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 9515563 - 9515503
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 247  Q
    |||||||||| |||||||||| ||||||||| |||||||  ||||| || |||||||||||    
T  9515563 attttcaagcatcaaatctaaaattcatatgaaaacatgagtgaaggacaatagatttgaa 9515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 9899195 - 9899263
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9899195 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9899263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 9899509 - 9899441
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9899509 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9899441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 9546428 - 9546471
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  9546428 gtcccttaacttaatttcaggtaacagtttggtcttttatcttt 9546471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 256
Target Start/End: Complemental strand, 12240773 - 12240623
Alignment:
Q  101 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 200  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || ||||||  |||| |||  ||| ||     |||  ||||||| ||||||    
T  12240773 cttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccattttca-----tatacattttcatgcttca 12240679  T
Q  201 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||| |||| |||| |||||| |  || ||  |||||||||||||||||||||    
T  12240678 aatctaatattcttatgtaaacatagacgaggattcatagatttgaagactgaaag 12240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 22569059 - 22568937
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||| |||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||    
T  22569059 gtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagc 22568965  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  22568964 ttcaaatctaatattcttatgcaaacat 22568937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 2882901 - 2882951
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  2882901 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 2882951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 11362076 - 11362026
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||| |||| ||||||||  |||||||| ||||||    
T  11362076 gtcccttaacttaatttcagataacaatttggtcctttatctttttttcat 11362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 22568781 - 22568831
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  22568781 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 22568831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 1925465 - 1925400
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 144  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| |||||||    
T  1925465 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttattt 1925400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 8487965 - 8488002
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8487965 attttcaagcttcaaatctaatattcttatgcaaacat 8488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 13178326 - 13178363
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  13178326 attttcaagcttcaaatctaatattcttatgcaaacat 13178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 20027984 - 20027947
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  20027984 attttcaagcttcaaatctaatattcttatgcaaacat 20027947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 24325095 - 24325132
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  24325095 attttcaagcttcaaatctaatattcttatgcaaacat 24325132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 25026078 - 25026115
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  25026078 attttcaagcttcaaatctaatatttatatgcaaacat 25026115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 28852187 - 28852256
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  28852187 tggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 28852256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 9220095 - 9220171
Alignment:
Q  71 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||| |||| ||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||    
T  9220095 aaaagaatgacaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcat 9220171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 9546725 - 9546657
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||    
T  9546725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcat 9546657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 13853432 - 13853388
Alignment:
Q  103 taacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||  |||||||| |||||||| ||||||    
T  13853432 taacttaatttcaggtaacagtttggtcttttatctttttttcat 13853388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 17853957 - 17853889
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  17853957 ggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatctttttttcat 17853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 20028065 - 20028021
Alignment:
Q  101 cttaacttaatttcaggtaacgatttggtctgttatctttatttc 145  Q
    |||||||||||||||||||||  |||||||| |||||||| ||||    
T  20028065 cttaacttaatttcaggtaacagtttggtcttttatctttttttc 20028021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 21926064 - 21926132
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| ||| ||||||    
T  21926064 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatatttttttcat 21926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 41317103 - 41316973
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    |||||||||||| |||||||| ||||||| |||||||||  ||||  |||||||||||||||| ||  || |||||   |||||||||||||||||||||    
T  41317103 attttcaagctttaaatctaaaattcataggcaaacatgaatgaaagaccatagatttgaagattgggaggtcacaagaaaataaaaccatagatttgaa 41317004  T
Q  287 gcttgatactccatatgcaaatggaccaaaat 318  Q
    |||||| | |||||||||||||| ||||||||    
T  41317003 gcttga-aatccatatgcaaatgaaccaaaat 41316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 44533716 - 44533586
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    ||||||| ||||||||||| |||||| ||| ||||||||| |||||||  ||||| || | ||||||||| ||| | |||||| |  |||||||||||||    
T  44533716 tgcatatggattttcaagcatcaaatttaaaattcatatgaaaacatgagtgaaggacaaaagatttgaacactaagagctcatatcgaaataaaaccat 44533617  T
Q  278 agatttgaagcttgatactccatatgcaaat 308  Q
    ||||||||| ||||| | |||||||||||||    
T  44533616 agatttgaatcttgaaaatccatatgcaaat 44533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 256
Target Start/End: Original strand, 42391287 - 42391467
Alignment:
Q  70 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 169  Q
    |||| ||||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||     
T  42391287 taaattaatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcc 42391386  T
Q  170 gtttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
     ||     | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  42391387 att-----ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 42391467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 43268146 - 43268011
Alignment:
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccataga 280  Q
    |||||||||||||||||| |||||||| |||| |||||||| || | ||||| | |||||||||||||| |||||   || |   ||||||||||||| |    
T  43268146 atatcgattttcaagctttaaatctaatattcttatgcaaatatagttgaag-atcatagatttgaagattgaaatgccataagaaaataaaaccataaa 43268048  T
Q  281 tttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||| |||||||| | |||||||  ||||| |||||||    
T  43268047 tttaaagcttgaaaatccatataaaaatgaaccaaaa 43268011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 11338188 - 11338066
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||||| ||||| |||  ||     | ||| |  ||||||||||    
T  11338188 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtccatt-----ttcatgtacattttcaagc 11338094  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  11338093 ttcaaatctaatattcttatgcaaacat 11338066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 37900544 - 37900634
Alignment:
Q  189 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 279  Q
    |||||| |||||||||||| ||| |||||||||||||| | | | | |||||||||||||||  |||||||||| ||||| | ||||||||    
T  37900544 tttcaaacttcaaatctaatatttatatgcaaacatggataatggatcatagatttgaagaccaaaagctcacaaagaaacagaaccatag 37900634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 37907055 - 37907145
Alignment:
Q  189 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 279  Q
    |||||| |||||||||||| ||| |||||||||||||| | | | | |||||||||||||||  |||||||||| ||||| | ||||||||    
T  37907055 tttcaaacttcaaatctaatatttatatgcaaacatggataatggatcatagatttgaagaccaaaagctcacaaagaaacagaaccatag 37907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 24331397 - 24331548
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || ||||||  |||| |||  ||     | |||||  ||||||||||    
T  24331397 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccatt-----ttcatatacattttcaagc 24331491  T
Q  197 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  24331492 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 24331548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 41922273 - 41922350
Alignment:
Q  70 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  41922273 taaaataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 41922350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 224
Target Start/End: Original strand, 45055322 - 45055462
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  45055322 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 45055416  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
      ||||  ||||||||||||||||||||| |||| |||||||||||    
T  45055417 ttatatacattttcaagcttcaaatctaatattcttatgcaaacat 45055462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 7172919 - 7172999
Alignment:
Q  67 ttttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||| ||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  7172919 ttttaaaataaaggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 7172999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 254
Target Start/End: Complemental strand, 20121520 - 20121350
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||| |||||||||||||| |||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     
T  20121520 tggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttca- 20121422  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
        |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  20121421 ----tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 20121350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 41857140 - 41857310
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||| |||||||||||||| |||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     
T  41857140 tggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttca- 41857238  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
        |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  41857239 ----tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 41857310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 21733086 - 21733239
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  21733086 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 21733180  T
Q  197 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    || |||| ||| |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  21733181 ttaaaatataatattcttatgcaaacatagacg-agaatcatacatttgaagactgaaag 21733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 41054805 - 41054674
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    |||||| ||||| |||||||| |||| ||||||||||| | | || ||||| | |||| |||| ||||||  || |   ||||||||||||| |||||||    
T  41054805 attttcgagctttaaatctaatattcttatgcaaacattgataaaaaaccacaaatttaaagattgaaaggccataagaaaataaaaccataaatttgaa 41054706  T
Q  287 gcttgatactccatatgcaaatggaccaaaat 318  Q
    |||||| | || ||||  ||||||||||||||    
T  41054705 gcttgaaaatcaatataaaaatggaccaaaat 41054674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 47221918 - 47221852
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||| ||||||| | ||||| | |||||||||||||||||||    
T  47221918 attttcaagcttcaaatctaatattcttatacaaacatagatgaag-atcatagatttgaagactgaa 47221852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 28588316 - 28588402
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 164  Q
    |||||||||||||| |   |||| ||||||||||||||||||||  |||||||| |||||||| ||||||  || |||||| |||||    
T  28588316 tggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcctttt 28588402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 32064493 - 32064621
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    ||||||||||||| ||||||| |||| |||| |||||| | |||| ||||||| ||||||||| |||||   || | | ||||||||||||  |||| ||    
T  32064493 attttcaagcttccaatctaatattcttatgtaaacatagatgaa-aaccataaatttgaagattgaaa-tgcatataaaaataaaaccatgaatttaaa 32064590  T
Q  287 gcttgatactccatatgcaaatggaccaaaa 317  Q
    |||||| | | | ||||||||||||||||||    
T  32064591 gcttgaaaattcttatgcaaatggaccaaaa 32064621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 2699828 - 2699760
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  2699828 attttcaagcttcaaatctaatattcttatgcaaacatagaag-aggatcatagatttgaagactgaaag 2699760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 31283257 - 31283325
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  || ||| |||||||||||||||||||||    
T  31283257 attttcaagtttcaaatctaatattcttatgcaaacatagacgaggaa-catagatttgaagactgaaag 31283325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 44458099 - 44458030
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  44458099 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 44458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 45055645 - 45055568
Alignment:
Q  70 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||  ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45055645 taaaatataggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 45055568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 12423845 - 12423913
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  12423845 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 12423913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 38495228 - 38495160
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  38495228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 38495160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 43575364 - 43575296
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  43575364 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatctttttttcat 43575296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 8522608 - 8522565
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  8522608 gtcccttaacttaatttcaggtaacaatttggtcctttatcttt 8522565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 41749791 - 41749725
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  41749791 attttcaagcttcaaatctaacattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 41749725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 44457887 - 44457953
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  44457887 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 44457953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 7149309 - 7149359
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  7149309 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 7149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 8805762 - 8805812
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8805762 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8805812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 8806040 - 8805990
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8806040 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8805990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 8949310 - 8949360
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8949310 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8949360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 317
Target Start/End: Original strand, 8949395 - 8949524
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||| ||||||  || |   |||||||| |||  |||| ||    
T  8949395 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagattgaaagaccataagaaaataaaatcatgaattttaa 8949493  T
Q  287 gcttgatactccatatgcaaatggaccaaaa 317  Q
    |||| | ||| |||||| |||||||| ||||    
T  8949494 gcttaaaacttcatatgaaaatggacaaaaa 8949524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 25436747 - 25436805
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccatttt 155  Q
    |||||||| ||||||||||| ||||||||| |||| |||||||  ||||||| ||||||    
T  25436747 gtcccttagcttaatttcagataacgatttcgtcttttatcttcttttcatgtcatttt 25436805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 34287813 - 34287763
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34287813 gtcccttaacttaatttcaggtaacactttggtcctttatctttttttcat 34287763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 38494932 - 38494982
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  38494932 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 38494982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 45062374 - 45062308
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 45062308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 47221725 - 47221775
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  47221725 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 47221775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 8522324 - 8522385
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  8522324 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatcttt 8522385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 8805847 - 8805884
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8805847 attttcaagcttcaaatctaatattcttatgcaaacat 8805884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 11337891 - 11337960
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||| |||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  11337891 tggcaaaattacacttttagtcctttaacttaatttcatgtaacaatttggtcctttatctttttttcat 11337960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 17173192 - 17173229
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17173192 attttcaagcttcaaatctaatattcttatgcaaacat 17173229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 31115839 - 31115888
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 130  Q
    ||||||||||| |   ||||||||||||||||||||||||| ||||||||    
T  31115839 caaaattacacttttagtcccttaacttaatttcaggtaacaatttggtc 31115888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 31813941 - 31813904
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31813941 attttcaagcttcaaatctaatattcttatgcaaacat 31813904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 43575080 - 43575129
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttca 146  Q
    |||||||||||||||||||||||||  |||||||  |||||||| |||||    
T  43575080 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttca 43575129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 45867740 - 45867691
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45867740 tcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 45867691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 46738475 - 46738438
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  46738475 attttcaagcttcaaatctaatattcttatgcaaacat 46738438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 47222010 - 47221941
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   || ||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  47222010 tggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 47221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 49114482 - 49114445
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  49114482 attttcaagcttcaaatctaacattcttatgcaaacat 49114445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 10543595 - 10543643
Alignment:
Q  269 taaaaccatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    |||||||||| ||||||||||||| | |||||||  |||||||||||||    
T  10543595 taaaaccataaatttgaagcttgaaaatccatataaaaatggaccaaaa 10543643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 24331697 - 24331633
Alignment:
Q  76 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    |||||||||||||||| |   |||||||||||||||||||| |||  ||||||||  ||||||||    
T  24331697 aatggcaaaattacacttttagtcccttaacttaatttcagataataatttggtcctttatcttt 24331633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 45533857 - 45533809
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatgg 226  Q
    |||||||  ||||||||  ||||||| ||||||||||||||||||||||    
T  45533857 tgcatatgaattttcaaatttcaaatttaagattcatatgcaaacatgg 45533809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 45867445 - 45867513
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||| |||||  |||||||  |||||||| ||||||    
T  45867445 ggcaaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcat 45867513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 46426653 - 46426729
Alignment:
Q  71 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||| ||||||||||| |    ||| |||||||||||| ||||||| ||||||||  |||||||| ||||||    
T  46426653 aaaataatgacaaaattacacttttaatcctttaacttaattttaggtaacaatttggtcctttatctttttttcat 46426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 12875884 - 12875748
Alignment:
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca-cagagaaataaaaccatag 279  Q
    |||| ||||||||||||| |||||||| |||| ||||||||||| | | || ||||||||||||||||| ||||||  || |||| |||||||||||||     
T  12875884 atatggattttcaagctttaaatctaatattcttatgcaaacatagataaaaaaccatagatttgaagattgaaaggccatcaga-aaataaaaccataa 12875786  T
Q  280 atttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||| | |||||||  |||||||||||||    
T  12875785 atttgaagcttgaaaatccatataaaaatggaccaaaa 12875748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 256
Target Start/End: Complemental strand, 7601915 - 7601736
Alignment:
Q  71 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctg 170  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||| ||  || |||| | ||||| |||      
T  7601915 aaaataatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttaatttcaatttggtcctttttgtcca 7601816  T
Q  171 tttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||     | |||||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  7601815 tt-----ttcatatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 7601736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 13675882 - 13675812
Alignment:
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 249  Q
    |||||| | |||| |||||||||| ||||||||||||||||||||| | ||||| |||||| |||||||||    
T  13675882 gcatatggttttttaagcttcaaagctaagattcatatgcaaacataggtgaaggaccatatatttgaaga 13675812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 14871733 - 14871819
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 164  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| |||||||    
T  14871733 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttctttt 14871819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 33381447 - 33381497
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  33381447 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcat 33381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 2467270 - 2467202
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  2467270 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 2467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 13577474 - 13577406
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  |||| | |||||||||||||| ||||||    
T  13577474 attttcaagcttcaaatctaatattcttatgcaaacatagacgaag-atcatagatttgaagattgaaag 13577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 16737118 - 16737049
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   ||||||||||||||||||||||||  ||||||||  |||||||| ||||||    
T  16737118 tggcaaaattacacttttagtcccttaacttaatttcaggtaataatttggtcatttatctttttttcat 16737049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 19131185 - 19131116
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  19131185 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 19131116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 33429848 - 33429779
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33429848 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33429779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 39589614 - 39589683
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  39589614 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 39589683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 1099185 - 1099066
Alignment:
Q  100 ccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttc 199  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||||    
T  1099185 ccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagcttc 1099091  T
Q  200 aaatctaagattcatatgcaaacat 224  Q
    |||||||| |||| |||||||||||    
T  1099090 aaatctaatattcttatgcaaacat 1099066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 1643539 - 1643607
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  1643539 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 1643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 16736801 - 16736869
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  16736801 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 16736869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 26349238 - 26349282
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaac 222  Q
    ||||||| |||||||||||||||||||||| ||||||||| ||||    
T  26349238 tgcatatagattttcaagcttcaaatctaaaattcatatgaaaac 26349282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 30129493 - 30129536
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||    
T  30129493 gtcctttaacttaatttcaggtaacaatttggtcttttatcttt 30129536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 39589787 - 39589721
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  39589787 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 39589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 42610884 - 42610950
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | ||||  ||||||||||||||||||    
T  42610884 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaattatagatttgaagactgaa 42610950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 7601611 - 7601661
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  7601611 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 7601661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 19130888 - 19130938
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  19130888 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 19130938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 33429556 - 33429673
Alignment:
Q  102 ttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaa 201  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||||||    
T  33429556 ttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagcttcaa 33429650  T
Q  202 atctaagattcatatgcaaacat 224  Q
    |||||| |||| |||||||||||    
T  33429651 atctaatattcttatgcaaacat 33429673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 2426228 - 2426297
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  2426228 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcat 2426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 3279399 - 3279362
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3279399 attttcaagcttcaaatctaatattcttatgcaaacat 3279362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 13697529 - 13697492
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  13697529 attttcaagcttcaaatctaatattcttatgcaaacat 13697492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 14871837 - 14871874
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  14871837 attttcaagcttcaaatctaatattcttatgcaaacat 14871874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 16736906 - 16736943
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  16736906 attttcaagcttcaaatctaatattcttatgcaaacat 16736943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 18707373 - 18707410
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  18707373 attttcaagcttcaaatctaatattcttatgcaaacat 18707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 31618378 - 31618341
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31618378 attttcaagcttcaaatctaatattcttatgcaaacat 31618341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 32772202 - 32772165
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  32772202 attttcaagcttcaaatctaatattcttatgcaaacat 32772165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 33381723 - 33381674
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33381723 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33381674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 40952067 - 40952128
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  40952067 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt 40952128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 40952171 - 40952208
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40952171 attttcaagcttcaaatctaatattcttatgcaaacat 40952208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 31485957 - 31486025
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||| |||||||||||||||||||||  |||||||  |||||||| ||||||    
T  31485957 ggcaaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcat 31486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 32771991 - 32772059
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||| ||||||||||||||||||||  |||||||  |||||||| ||||||    
T  32771991 ggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcat 32772059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 12725345 - 12725413
Alignment:
Q  470 actgacttgaatcaactaccatacggtaggaataatcagaagcatcggttccagatggtcttcccaacg 538  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||    
T  12725345 actgacttgaatcaacaaccatacggtaggaataatcagaaccatcggttcctgaaggtcttcccaacg 12725413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 52538196 - 52538023
Alignment:
Q  76 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgc 175  Q
    |||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||       
T  52538196 aatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatt--- 52538100  T
Q  176 aatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
      | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | ||||||||||||||||||||    
T  52538099 --ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaa 52538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 256
Target Start/End: Original strand, 32922066 - 32922238
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||         
T  32922066 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttgatcctttttgtccatt----- 32922160  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  32922161 ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 32922238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 318
Target Start/End: Original strand, 33815346 - 33815486
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 277  Q
    |||||||  ||||||||| || |||||| |  ||||||||||||||||| | ||||| |||| |||||||||| || |  |||||| |||||||||| ||    
T  33815346 tgcatatgaattttcaagtttaaaatctcatgttcatatgcaaacatggataaagaatcataaatttgaagaccgacaagtcacagggaaataaaactat 33815445  T
Q  278 agatttgaagcttgatactccatatgcaaatggaccaaaat 318  Q
    |||||| ||| |||| | |  |||||||||| | |||||||    
T  33815446 agattttaagtttgaaaattgatatgcaaatcggccaaaat 33815486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 17040057 - 17040140
Alignment:
Q  234 accatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    |||||||||||||||| ||| || ||| |   |||||||| |||||||||||||||||| | |||||||||||||| |||||||    
T  17040057 accatagatttgaagaatgagaggtcataagaaaataaaatcatagatttgaagcttgaaaatccatatgcaaatgaaccaaaa 17040140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 47122541 - 47122631
Alignment:
Q  188 ttttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccata 278  Q
    |||||||||||  |||||||||||||||||||||||| | ||||| || |||||||||| || ||| | |||| || ||||||||| ||||    
T  47122541 ttttcaagctttcaatctaagattcatatgcaaacatcggtgaaggactatagatttgacgagtgagaactcatagggaaataaaatcata 47122631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 8358583 - 8358546
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8358583 attttcaagcttcaaatctaagattcatatgcaaacat 8358546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 308
Target Start/End: Original strand, 30534629 - 30534750
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 286  Q
    |||||||||| |||||||||| ||| ||||| |||||||  ||||| || | ||||||||| ||  | |||||| |  ||||||||| ||||||||||||    
T  30534629 attttcaagcatcaaatctaaaatttatatgaaaacatgagtgaaggacaacagatttgaacacgaagagctcaaattgaaataaaatcatagatttgaa 30534728  T
Q  287 gcttgatactccatatgcaaat 308  Q
     ||| | | |||||||||||||    
T  30534729 tctttaaaatccatatgcaaat 30534750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 256
Target Start/End: Complemental strand, 52654246 - 52654075
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| |||     
T  52654246 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcaa- 52654148  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
        ||  ||||||||||||||||||| | |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  52654147 ----atacattttcaagcttcaaatcttatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 52654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 10993625 - 10993693
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  10993625 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 10993693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 16530318 - 16530386
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  16530318 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcat 16530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 23962952 - 23963079
Alignment:
Q  189 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagc 288  Q
    ||||||| |||| |||||| |||  ||||||||||| | |||| ||||||||||||||||| |||||  ||| |   ||||||||||||  ||||||||     
T  23962952 tttcaagtttcagatctaatattgttatgcaaacatagatgaa-aaccatagatttgaagattgaaatgtcataagaaaataaaaccatgaatttgaagt 23963050  T
Q  289 ttgatactccatatgcaaatggaccaaaa 317  Q
    |||| | | |||||||||||| |||||||    
T  23963051 ttgaaaattcatatgcaaatgaaccaaaa 23963079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 373
Target Start/End: Original strand, 12725227 - 12725270
Alignment:
Q  330 gtttctttccctttgcaacaagttgataacctaattaacaaaaa 373  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  12725227 gtttcttcccctttgcaacaagttgataccctaattaacaaaaa 12725270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 254
Target Start/End: Original strand, 16019957 - 16020126
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||  || |||| | ||||| |||  ||| ||      
T  16019957 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttca-- 16020054  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
       |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  16020055 ---tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 16020126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 255
Target Start/End: Complemental strand, 7067538 - 7067386
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||| ||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     ||   ||||||||||    
T  7067538 gtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttgatcctttttgtccattttca-----tacacattttcaagc 7067444  T
Q  197 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
    ||||||||||| |||| ||||||||||| |  | || | ||||||||||||||||||||    
T  7067443 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaa 7067386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 46648089 - 46648159
Alignment:
Q  99 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 169  Q
    ||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||||| ||||| ||||    
T  46648089 cccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtct 46648159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 46689368 - 46689300
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  46689368 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 46689300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 9902653 - 9902721
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9902653 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9902721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 17040224 - 17040156
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||    ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||    
T  17040224 ggcaaaattacactcatggtcccttaacttaatttcagttaacaatttggtcctttatctttttttcat 17040156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 20984228 - 20984160
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  20984228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 20984160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 32922381 - 32922313
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  32922381 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 32922313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 39791917 - 39791985
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||| |||||||||||||||||||| ||||||||  |||||||| ||||||    
T  39791917 ggcaaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcctttatctttttttcat 39791985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 18636057 - 18635983
Alignment:
Q  181 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    |||| |||||||||| ||||||||||| |||| ||| ||||||| | ||||| ||||| |||||||||| ||||||    
T  18636057 atatggattttcaagtttcaaatctaatattcttatacaaacatagatgaag-accatggatttgaagattgaaag 18635983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 35222021 - 35222068
Alignment:
Q  277 tagatttgaagcttgatactccatatgcaaatggaccaaaataacaaa 324  Q
    |||||||||||| ||| | |||||||||||||||||||||| ||||||    
T  35222021 tagatttgaagcatgaaaatccatatgcaaatggaccaaaagaacaaa 35222068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 39792215 - 39792172
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  39792215 gtcccttaacttaatttcaggtaacaatttggtcctttatcttt 39792172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 52653929 - 52653992
Alignment:
Q  77 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  52653929 atggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt 52653992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 54997038 - 54997089
Alignment:
Q  266 aaataaaaccatagatttgaagcttgatactccatatgcaaatggaccaaaa 317  Q
    ||||||||||||| ||||||||||||| | | |||||| |||||||||||||    
T  54997038 aaataaaaccataaatttgaagcttgaaaattcatatgtaaatggaccaaaa 54997089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 44551227 - 44551161
Alignment:
Q  81 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  44551227 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 44551161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 52537897 - 52537947
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  52537897 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 52537947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 9902951 - 9902902
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9902951 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 17362509 - 17362472
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17362509 attttcaagcttcaaatctaatattcttatgcaaacat 17362472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 22539898 - 22539861
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22539898 attttcaagcttcaaatctaatattcttatgcaaacat 22539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 24270573 - 24270505
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||| ||||||| |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  24270573 attttcaagcttcgaatctaatattcttatgcaaacatagaag-agaatcataaatttgaagactgaaag 24270505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 25332028 - 25331991
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  25332028 attttcaagcttcaaatctaatattcttatgcaaacat 25331991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 26842903 - 26842940
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  26842903 attttcaagcttcaaatctaatattcttatgcaaacat 26842940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 26886821 - 26886753
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| |||| |||||| | || || | |||||||||||||| ||||||    
T  26886821 attttcaagcttcaaatctaatattcttatgtaaacatagatg-aggatcatagatttgaagattgaaag 26886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 35130783 - 35130852
Alignment:
Q  71 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 140  Q
    ||||| ||||||||||||||| |    ||||||||||||||||||||||||  |||||||  ||||||||    
T  35130783 aaaattatggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttt 35130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 35131091 - 35131042
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  35131091 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 35131042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 41935596 - 41935633
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  41935596 attttcaagcttcaaatctaatattcttatgcaaacat 41935633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 49860856 - 49860772
Alignment:
Q  200 aaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttga 285  Q
    |||||||| |||||||||||||||||  ||||  | |||| |||| |||| ||||| |||||| |||||| |||||||| ||||||    
T  49860856 aaatctaaaattcatatgcaaacatgagtgaatgatcata-atttaaagattgaaaactcacaaagaaatgaaaccatatatttga 49860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 2272580 - 2272644
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagact 251  Q
    |||||||||  |||||||||| | ||||||| ||||||  ||||| |||||||||||| ||||||    
T  2272580 attttcaagtatcaaatctaaaagtcatatgaaaacatcactgaaaaaccatagatttaaagact 2272644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 25331815 - 25331863
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttg 127  Q
    ||||||||||||| |   ||||||||||||||||||||||||| |||||    
T  25331815 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttg 25331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 30637042 - 30637086
Alignment:
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||| |||||||||||||||||||||| |||| |||| ||||||    
T  30637042 catatggattttcaagcttcaaatctaatattcttatgtaaacat 30637086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 32488898 - 32488830
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||| |||||||||||||||||||   |||||||| |||||||| ||||||    
T  32488898 ggcaaaattacacgtttagtcctttaacttaatttcaggtaatagtttggtcttttatctttttttcat 32488830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 49387394 - 49387327
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
    |||||||| |||||||||||| |||  ||||||||||| |  | |||| ||||||||||||||||||||    
T  49387394 attttcaaacttcaaatctaatattgctatgcaaacatagacg-agaatcatagatttgaagactgaaa 49387327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 470 - 538
Target Start/End: Complemental strand, 34280162 - 34280094
Alignment:
Q  470 actgacttgaatcaactaccatacggtaggaataatcagaagcatcggttccagatggtcttcccaacg 538  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||| || || |||||||||||||    
T  34280162 actgacttgaatcaacgaccatacggtaggaataatcagaaccgtcggtccctgaaggtcttcccaacg 34280094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 25061301 - 25061369
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |  |||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  25061301 ggcaaaattacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 25061369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 31574567 - 31574499
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  31574567 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 31574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 14463440 - 14463369
Alignment:
Q  76 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  14463440 aatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 14463369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 32809155 - 32809222
Alignment:
Q  80 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||| |  |||||||||| ||||||||||||||| ||||||||  |||||||| ||||||    
T  32809155 gcaaaattacacttttggtcccttaatttaatttcaggtaacaatttggtcctttatctttttttcat 32809222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 50710721 - 50710874
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| |  |||| |||  ||| |||     ||  ||||||||||    
T  50710721 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcttttttgtccattttcaa-----atacattttcaagc 50710815  T
Q  197 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||| | |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  50710816 ttcaaatcttatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 50710874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 11221287 - 11221166
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 197  Q
    |||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | | |||  |||||||||||    
T  11221287 tcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcgtatacattttcaagct 11221193  T
Q  198 tcaaatctaagattcatatgcaaacat 224  Q
    |||||||||| |||| |||||||||||    
T  11221192 tcaaatctaatattcttatgcaaacat 11221166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 34280273 - 34280231
Alignment:
Q  330 gtttctttccctttgcaacaagttgataacctaattaacaaaa 372  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  34280273 gtttcttcccctttgcaacaagttgataccctaattaacaaaa 34280231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 35415538 - 35415488
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  35415538 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcat 35415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 44664620 - 44664761
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   ||||||||||||||||||||||||| |||| |||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  44664620 tggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 44664714  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    |  ||||  ||||||||||||||||||||| |||| |||||||||||    
T  44664715 tttatatacattttcaagcttcaaatctaatattcttatgcaaacat 44664761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 48738219 - 48738173
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  48738219 tgcatatagattttcaaacttcaaatctaatattcatatgcaaacat 48738173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 20209149 - 20209218
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  20209149 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 20209218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 25061602 - 25061541
Alignment:
Q  69 ttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 130  Q
    ||||||||| ||||||||||||| |  |||| |||||||||||||||||||||  |||||||    
T  25061602 ttaaaataaaggcaaaattacacttttggtctcttaacttaatttcaggtaacagtttggtc 25061541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 32809433 - 32809349
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 164  Q
    ||||||||||||| |  ||||| ||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| |||||||    
T  32809433 ggcaaaattacacttttggtccattaacttaatttcaggtaacagtttggtct-ttatctttttttcatttcaatttggttctttt 32809349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 45214588 - 45214520
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||||| ||||    
T  45214588 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactcaaag 45214520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 224
Target Start/End: Original strand, 46292582 - 46292722
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   || ||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||     |    
T  46292582 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatt-----t 46292676  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
      ||||  ||||||||||||||||||||| |||| |||||||||||    
T  46292677 ttatatacattttcaagcttcaaatctaatattcttatgcaaacat 46292722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 292
Target Start/End: Original strand, 2397882 - 2397993
Alignment:
Q  180 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 279  Q
    ||||| ||||||||| |||||||||||| |||| |||| ||| || | ||||| |||||| ||||||||| |||||  ||| |   ||||||||||||      
T  2397882 catatggattttcaaacttcaaatctaatattcttatgtaaatatagatgaag-accataaatttgaagattgaaatgtcataagaaaataaaaccatga 2397980  T
Q  280 atttgaagcttga 292  Q
    |||||||||||||    
T  2397981 atttgaagcttga 2397993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 50711309 - 50711241
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  50711309 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 50711241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 13997213 - 13997091
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||| ||||||   | |||| | ||||| |||  ||     | |||||  ||||||||||    
T  13997213 gtcccttgacttaatttcaggtaacaatttggtcctttatctttttttcattttaatttggtcctttttgtcaatt-----ttcatatacattttcaagc 13997119  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  13997118 ttcaaatctaatattcttatgcaaacat 13997091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 25061511 - 25061445
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  25061511 attttcaagcttcaaatctaatattcttatgcaaacatag-aggaggatcatagatttgaagactgaa 25061445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 29434319 - 29434441
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 196  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  ||||||||||    
T  29434319 gtcccttaacttaatttcaggtaacaatttgatcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagc 29434413  T
Q  197 ttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||| |||| |||||||||||    
T  29434414 ttcaaatctaatattcttatgcaaacat 29434441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 2862692 - 2862769
Alignment:
Q  69 ttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||| ||||||||||||| |   ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  2862692 ttaaaataa-ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 2862769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 11471860 - 11471941
Alignment:
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca 260  Q
    |||||||  |||||||||| |||||||||| ||||||||| ||| |||  ||||| | |||||||||||| ||| ||||||||    
T  11471860 tgcatatgcattttcaagcatcaaatctaaaattcatatgaaaa-atgagtgaaggatcatagatttgaacactaaaagctca 11471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 29560440 - 29560502
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 249  Q
    |||||||| |||||||  |||||||||||||||||||| | ||||  |||||| |||||||||    
T  29560440 attttcaatcttcaaagttaagattcatatgcaaacatagatgaaagaccatatatttgaaga 29560502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 34281237 - 34281175
Alignment:
Q  15 cagtcaaatttagcttgaggagcatcacaaaatagtttgaccatattgaaatttttaaaataa 77  Q
    |||| |||| |||||||||||||| ||| ||||||||  ||||||||||| |||||| |||||    
T  34281237 cagttaaatgtagcttgaggagcagcaccaaatagttaaaccatattgaactttttataataa 34281175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 38675296 - 38675155
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 177  Q
    |||||||||||||| |   |||||||||| ||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  38675296 tggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 38675202  T
Q  178 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    | |||||  ||||||||||||||||||||| |||| ||| |||||||    
T  38675201 ttcatatacattttcaagcttcaaatctaatattcttatacaaacat 38675155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 44920194 - 44920144
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||| ||||||    
T  44920194 gtcccttaacttaatttcaggcaacaatttggtcctttatctttttttcat 44920144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 45171596 - 45171646
Alignment:
Q  97 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||||| |||||| ||||||||  |||||||| ||||||    
T  45171596 gtcccttaacttaatttcgggtaacaatttggtcctttatctttttttcat 45171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 2579114 - 2579163
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||||| | ||||||||||||||  |||||||| ||||||    
T  2579114 tcccttaacttaattttaagtaacgatttggtcctttatctttttttcat 2579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 2773367 - 2773299
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||| | |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  2773367 attttcaagcttcaaatcttatattcttatgcaaacatagacg-agaatcataaatttgaagactgaaag 2773299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 15543102 - 15543139
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  15543102 attttcaagcttcaaatctaatattcttatgcaaacat 15543139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 18168857 - 18168925
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    ||||||||||||||||||| | |||| ||||||||||| |  |||| | |||| ||||||||||||||||    
T  18168857 attttcaagcttcaaatcttatattcttatgcaaacatagacgaag-atcatatatttgaagactgaaag 18168925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 18169069 - 18169000
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  18169069 tggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcatttatctttttttcat 18169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 28843835 - 28843903
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 256  Q
    |||||||| |||||||||||| |||| ||||||||||| | || || | |||||||||||||| ||||||    
T  28843835 attttcaaacttcaaatctaatattcttatgcaaacatagatg-aggatcatagatttgaagattgaaag 28843903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 44920001 - 44920038
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  44920001 attttcaagcttcaaatctaatattcttatgcaaacat 44920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 49002236 - 49002305
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||| ||||||||||  |||||||  |||||||| ||||||    
T  49002236 tggcaaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcat 49002305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 49002446 - 49002409
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  49002446 attttcaagcttcaaatctaatattcttatgcaaacat 49002409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 50710892 - 50710961
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggt-ctgttatctttatttcat 147  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||| || |||||||| ||||||    
T  50710892 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttttatctttttttcat 50710961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 50711171 - 50711102
Alignment:
Q  78 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||||| |  |||||||| ||||||    
T  50711171 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggacctttatctttttttcat 50711102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 11839287 - 11839358
Alignment:
Q  188 ttttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca 260  Q
    ||||||||| ||||||| || ||||||| |||||||||  | ||| |||||||||||||| ||| ||||||||    
T  11839287 ttttcaagcatcaaatccaaaattcataggcaaacatgagt-aagtaccatagatttgaacactaaaagctca 11839358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 28844046 - 28843978
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||| |   ||||||||||||||||||||  ||| ||||||||  |||||||| ||||||    
T  28844046 ggcaaaattacacttttagtcccttaacttaatttcagacaacaatttggtcctttatctttttttcat 28843978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 39778490 - 39778454
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaaca 223  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  39778490 attttcaagcttcaaatctaatattcttatgcaaaca 39778454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 44036789 - 44036856
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 255  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| |||||    
T  44036789 attttcaagtttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaa 44036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 258966 - 258900
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 254  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  258966 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 258900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 258774 - 258823
Alignment:
Q  98 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 147  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  258774 tcccttaacttaatttcaggtaacagtttggtccattatctttttttcat 258823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 8599 - 8562
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8599 attttcaagcttcaaatctaatattcttatgcaaacat 8562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 41382 - 41419
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  41382 attttcaagcttcaaatctaatattcttatgcaaacat 41419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 73687 - 73547
Alignment:
Q  79 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 178  Q
    ||||||||||||| |   ||||||||||||||| |||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  73687 ggcaaaattacacttttagtcccttaacttaatatcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 73593  T
Q  179 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 224  Q
     |||||  ||||||||||||||||||||| |||  |||||||||||    
T  73592 tcatatacattttcaagcttcaaatctaatattattatgcaaacat 73547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 323624 - 323587
Alignment:
Q  187 attttcaagcttcaaatctaagattcatatgcaaacat 224  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  323624 attttcaagcttcaaatctaatattcttatgcaaacat 323587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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