View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4719_high_7 (Length: 372)

Name: NF4719_high_7
Description: NF4719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4719_high_7
NF4719_high_7
[»] chr3 (45 HSPs)
chr3 (11-234)||(24483696-24483931)
chr3 (11-195)||(31270253-31270437)
chr3 (11-194)||(31462764-31462947)
chr3 (11-194)||(40013290-40013475)
chr3 (11-194)||(14585387-14585573)
chr3 (11-183)||(35174643-35174815)
chr3 (15-161)||(13701994-13702140)
chr3 (12-161)||(48652459-48652608)
chr3 (11-139)||(36691817-36691945)
chr3 (11-161)||(32080772-32080922)
chr3 (12-161)||(48400860-48401009)
chr3 (11-139)||(11819066-11819194)
chr3 (12-158)||(49628106-49628253)
chr3 (16-169)||(53155453-53155603)
chr3 (12-161)||(3456904-3457053)
chr3 (15-112)||(54239040-54239137)
chr3 (18-126)||(22484961-22485069)
chr3 (11-183)||(36624712-36624881)
chr3 (14-128)||(34960879-34960993)
chr3 (11-149)||(38527236-38527374)
chr3 (11-162)||(55090601-55090752)
chr3 (11-161)||(4206529-4206679)
chr3 (11-139)||(40883886-40884015)
chr3 (12-93)||(41868313-41868394)
chr3 (14-180)||(27189414-27189580)
chr3 (11-139)||(30156299-30156427)
chr3 (11-139)||(19645204-19645332)
chr3 (14-195)||(39610131-39610320)
chr3 (12-103)||(33637422-33637513)
chr3 (15-78)||(34103739-34103802)
chr3 (12-161)||(1074913-1075061)
chr3 (12-143)||(19861298-19861427)
chr3 (10-92)||(2147756-2147839)
chr3 (10-96)||(106052-106139)
chr3 (11-183)||(53402568-53402732)
chr3 (30-112)||(4817867-4817949)
chr3 (10-79)||(3312486-3312555)
chr3 (14-72)||(4219229-4219288)
chr3 (306-372)||(24483944-24484010)
chr3 (12-66)||(55454922-55454976)
chr3 (10-125)||(39429516-39429632)
chr3 (14-72)||(5327497-5327556)
chr3 (18-63)||(46732770-46732815)
chr3 (40-77)||(54706715-54706752)
chr3 (16-48)||(47733900-47733932)
[»] chr2 (48 HSPs)
chr2 (11-194)||(12704615-12704798)
chr2 (11-162)||(43474138-43474289)
chr2 (14-183)||(5754227-5754396)
chr2 (14-194)||(31908829-31909009)
chr2 (11-158)||(25067816-25067963)
chr2 (11-161)||(38535315-38535465)
chr2 (11-194)||(36867936-36868119)
chr2 (10-139)||(27095688-27095817)
chr2 (11-139)||(20561142-20561270)
chr2 (11-161)||(33012038-33012188)
chr2 (11-163)||(7072958-7073110)
chr2 (11-183)||(9978679-9978851)
chr2 (11-170)||(35333457-35333616)
chr2 (14-167)||(44942240-44942393)
chr2 (11-161)||(11937868-11938019)
chr2 (13-124)||(13740672-13740783)
chr2 (10-161)||(15919835-15919985)
chr2 (14-128)||(10287019-10287132)
chr2 (11-194)||(22597061-22597246)
chr2 (13-161)||(32015181-32015333)
chr2 (11-161)||(28261898-28262055)
chr2 (11-112)||(28231107-28231208)
chr2 (21-161)||(9689993-9690133)
chr2 (11-103)||(32314461-32314553)
chr2 (14-128)||(34416774-34416888)
chr2 (11-128)||(4604317-4604434)
chr2 (12-102)||(4426669-4426759)
chr2 (11-112)||(4739339-4739440)
chr2 (11-128)||(17268136-17268251)
chr2 (12-149)||(18089407-18089540)
chr2 (14-175)||(34470912-34471074)
chr2 (11-128)||(4732065-4732181)
chr2 (16-139)||(17767566-17767689)
chr2 (11-86)||(13879017-13879091)
chr2 (11-86)||(14019142-14019216)
chr2 (13-69)||(12891131-12891187)
chr2 (40-194)||(34963105-34963261)
chr2 (16-96)||(6431402-6431483)
chr2 (14-67)||(41797649-41797702)
chr2 (18-112)||(17792483-17792578)
chr2 (14-139)||(11581141-11581266)
chr2 (40-161)||(38384481-38384602)
chr2 (21-63)||(20607332-20607374)
chr2 (14-63)||(17116415-17116464)
chr2 (22-128)||(11798537-11798643)
chr2 (14-112)||(15261425-15261524)
chr2 (14-61)||(20598648-20598695)
chr2 (14-63)||(15028323-15028372)
[»] chr7 (55 HSPs)
chr7 (11-194)||(5684293-5684476)
chr7 (11-194)||(5709343-5709526)
chr7 (14-161)||(42603782-42603929)
chr7 (11-194)||(17473733-17473916)
chr7 (11-194)||(17579298-17579481)
chr7 (11-183)||(45457566-45457741)
chr7 (11-183)||(1281147-1281322)
chr7 (11-139)||(28664922-28665050)
chr7 (11-194)||(17509214-17509399)
chr7 (11-194)||(17543815-17544000)
chr7 (11-161)||(46026039-46026189)
chr7 (11-139)||(9785300-9785428)
chr7 (11-194)||(11832943-11833130)
chr7 (14-161)||(10574342-10574489)
chr7 (11-161)||(21603424-21603573)
chr7 (11-161)||(36579322-36579472)
chr7 (14-129)||(2622585-2622700)
chr7 (14-161)||(39532988-39533134)
chr7 (12-183)||(27535395-27535568)
chr7 (14-103)||(10094460-10094549)
chr7 (11-139)||(21990644-21990773)
chr7 (13-161)||(32740714-32740862)
chr7 (20-161)||(42644637-42644778)
chr7 (11-194)||(6667321-6667506)
chr7 (11-101)||(15674622-15674712)
chr7 (14-163)||(48304406-48304557)
chr7 (10-128)||(24320232-24320350)
chr7 (11-109)||(43847083-43847181)
chr7 (11-161)||(41287918-41288069)
chr7 (10-139)||(22747517-22747645)
chr7 (10-142)||(4621376-4621508)
chr7 (11-138)||(45482048-45482175)
chr7 (10-139)||(21954827-21954956)
chr7 (11-86)||(3266424-3266499)
chr7 (11-78)||(32643056-32643123)
chr7 (11-103)||(9719983-9720076)
chr7 (10-112)||(14657830-14657934)
chr7 (11-64)||(26161038-26161091)
chr7 (11-67)||(36719562-36719620)
chr7 (13-139)||(39707273-39707399)
chr7 (13-125)||(37376043-37376160)
chr7 (34-74)||(40761659-40761699)
chr7 (10-100)||(9136979-9137070)
chr7 (21-63)||(6646610-6646652)
chr7 (117-183)||(15674741-15674807)
chr7 (23-92)||(29352275-29352345)
chr7 (14-63)||(39990187-39990236)
chr7 (14-72)||(33476665-33476724)
chr7 (22-63)||(17223163-17223204)
chr7 (13-61)||(10623861-10623909)
chr7 (14-99)||(14810626-14810712)
chr7 (14-99)||(15257621-15257707)
chr7 (32-139)||(17221648-17221754)
chr7 (13-72)||(27705081-27705141)
chr7 (14-42)||(37714558-37714586)
[»] chr5 (42 HSPs)
chr5 (11-194)||(17699481-17699664)
chr5 (11-161)||(17331289-17331439)
chr5 (11-184)||(28040567-28040740)
chr5 (11-161)||(33164478-33164628)
chr5 (11-183)||(32347724-32347899)
chr5 (16-163)||(12439649-12439795)
chr5 (11-195)||(17096249-17096433)
chr5 (12-161)||(6281005-6281154)
chr5 (11-126)||(6635245-6635361)
chr5 (14-194)||(29097717-29097897)
chr5 (14-127)||(27241059-27241172)
chr5 (11-112)||(39179838-39179939)
chr5 (22-186)||(43493808-43493972)
chr5 (10-141)||(178115-178246)
chr5 (14-137)||(34431045-34431168)
chr5 (11-141)||(42609125-42609255)
chr5 (12-161)||(3740319-3740467)
chr5 (14-161)||(20483147-20483294)
chr5 (11-128)||(42396522-42396639)
chr5 (11-161)||(26295067-26295218)
chr5 (11-109)||(3079315-3079413)
chr5 (10-92)||(12891706-12891788)
chr5 (10-112)||(17687215-17687317)
chr5 (11-139)||(23882126-23882254)
chr5 (10-96)||(18653808-18653894)
chr5 (19-128)||(39531422-39531528)
chr5 (11-162)||(981038-981186)
chr5 (12-139)||(6681887-6682012)
chr5 (11-181)||(7771831-7771983)
chr5 (11-70)||(2555360-2555419)
chr5 (11-76)||(11734829-11734892)
chr5 (16-94)||(25961953-25962033)
chr5 (21-62)||(14534959-14535000)
chr5 (14-72)||(25487657-25487716)
chr5 (14-63)||(585867-585916)
chr5 (14-78)||(7150860-7150925)
chr5 (11-138)||(23428226-23428363)
chr5 (15-63)||(26240692-26240740)
chr5 (14-72)||(26905651-26905710)
chr5 (14-57)||(35276001-35276044)
chr5 (13-62)||(12215195-12215244)
chr5 (14-59)||(32309226-32309271)
[»] chr6 (29 HSPs)
chr6 (11-183)||(15590089-15590261)
chr6 (11-194)||(8693667-8693853)
chr6 (12-161)||(12481381-12481530)
chr6 (12-158)||(21507819-21507965)
chr6 (11-161)||(23654211-23654361)
chr6 (11-161)||(6419868-6420018)
chr6 (11-194)||(2304820-2305003)
chr6 (12-139)||(31937431-31937556)
chr6 (11-137)||(14783181-14783307)
chr6 (11-161)||(19402818-19402968)
chr6 (11-163)||(6296259-6296414)
chr6 (11-163)||(6303069-6303224)
chr6 (11-104)||(23638128-23638221)
chr6 (10-93)||(4921890-4921973)
chr6 (16-161)||(35219920-35220063)
chr6 (10-112)||(4393780-4393882)
chr6 (12-70)||(29927105-29927163)
chr6 (11-78)||(31705209-31705276)
chr6 (78-194)||(4084945-4085062)
chr6 (32-99)||(31937563-31937629)
chr6 (14-128)||(15175807-15175920)
chr6 (14-72)||(20028711-20028769)
chr6 (14-64)||(31801243-31801293)
chr6 (29-78)||(15057725-15057774)
chr6 (10-91)||(2488169-2488250)
chr6 (14-63)||(8508202-8508251)
chr6 (14-128)||(15470248-15470361)
chr6 (14-47)||(7870247-7870280)
chr6 (20-72)||(9044099-9044152)
[»] chr8 (36 HSPs)
chr8 (11-183)||(24791186-24791358)
chr8 (11-194)||(9501517-9501701)
chr8 (11-139)||(30026898-30027026)
chr8 (11-163)||(37612612-37612764)
chr8 (11-161)||(31202419-31202569)
chr8 (11-161)||(31407766-31407916)
chr8 (14-161)||(14600719-14600866)
chr8 (14-161)||(39067710-39067857)
chr8 (14-128)||(10338843-10338957)
chr8 (11-139)||(12329609-12329738)
chr8 (12-128)||(41361726-41361842)
chr8 (11-182)||(1810238-1810405)
chr8 (11-125)||(2234488-2234602)
chr8 (11-162)||(2025227-2025378)
chr8 (11-137)||(3204774-3204899)
chr8 (12-102)||(31308168-31308258)
chr8 (13-161)||(11161843-11161991)
chr8 (12-107)||(37128505-37128600)
chr8 (11-83)||(7579873-7579945)
chr8 (20-139)||(13570753-13570872)
chr8 (11-161)||(23971114-23971262)
chr8 (12-161)||(10147907-10148057)
chr8 (11-163)||(1039912-1040062)
chr8 (18-121)||(15288823-15288926)
chr8 (18-121)||(15469192-15469295)
chr8 (11-139)||(24699813-24699943)
chr8 (11-96)||(4757191-4757276)
chr8 (11-86)||(22787528-22787603)
chr8 (16-111)||(32778973-32779069)
chr8 (10-102)||(2968551-2968644)
chr8 (10-128)||(30039354-30039466)
chr8 (11-112)||(28297124-28297227)
chr8 (14-112)||(7281655-7281756)
chr8 (18-143)||(10334153-10334279)
chr8 (13-60)||(13576207-13576254)
chr8 (14-72)||(42260984-42261043)
[»] chr4 (53 HSPs)
chr4 (14-194)||(22757022-22757202)
chr4 (11-183)||(43244391-43244563)
chr4 (11-194)||(20399913-20400099)
chr4 (11-183)||(394284-394450)
chr4 (11-183)||(7083826-7083997)
chr4 (11-194)||(25658092-25658278)
chr4 (14-161)||(26742476-26742623)
chr4 (12-162)||(6911640-6911790)
chr4 (14-128)||(7060318-7060432)
chr4 (11-137)||(13965545-13965671)
chr4 (11-161)||(24568723-24568873)
chr4 (11-128)||(29268787-29268904)
chr4 (18-194)||(39837522-39837699)
chr4 (14-161)||(24825610-24825757)
chr4 (11-182)||(26674309-26674483)
chr4 (11-161)||(8712491-8712641)
chr4 (11-161)||(11210323-11210473)
chr4 (11-161)||(27394791-27394941)
chr4 (10-128)||(44757051-44757169)
chr4 (11-161)||(30201999-30202149)
chr4 (11-195)||(29922761-29922948)
chr4 (11-128)||(38944158-38944274)
chr4 (14-161)||(24100099-24100249)
chr4 (13-163)||(12717129-12717281)
chr4 (19-194)||(478030-478201)
chr4 (10-159)||(5814310-5814459)
chr4 (11-112)||(6881966-6882067)
chr4 (11-108)||(43493297-43493394)
chr4 (11-128)||(51152119-51152235)
chr4 (11-139)||(7861216-7861343)
chr4 (30-194)||(31521910-31522074)
chr4 (18-125)||(626566-626671)
chr4 (11-102)||(50801237-50801328)
chr4 (11-128)||(20887766-20887882)
chr4 (11-128)||(45351080-45351199)
chr4 (11-128)||(45360559-45360678)
chr4 (11-127)||(19745384-19745501)
chr4 (11-127)||(19794305-19794422)
chr4 (11-98)||(39523433-39523520)
chr4 (10-139)||(22049413-22049542)
chr4 (11-78)||(8517466-8517533)
chr4 (11-125)||(36124359-36124471)
chr4 (11-103)||(13586250-13586343)
chr4 (11-86)||(24611809-24611884)
chr4 (14-112)||(2447810-2447908)
chr4 (11-139)||(42197536-42197665)
chr4 (29-112)||(3159052-3159136)
chr4 (10-59)||(28837128-28837177)
chr4 (12-71)||(32616836-32616895)
chr4 (52-161)||(7084167-7084276)
chr4 (10-91)||(27090755-27090836)
chr4 (22-62)||(1551568-1551608)
chr4 (14-42)||(22621513-22621541)
[»] scaffold0312 (1 HSPs)
scaffold0312 (11-161)||(6098-6248)
[»] chr1 (39 HSPs)
chr1 (11-161)||(424301-424451)
chr1 (16-161)||(28678145-28678290)
chr1 (12-161)||(4882370-4882519)
chr1 (11-194)||(29205210-29205396)
chr1 (11-139)||(32784091-32784219)
chr1 (11-161)||(42490854-42491004)
chr1 (14-161)||(33487043-33487190)
chr1 (11-161)||(3232749-3232899)
chr1 (11-161)||(27534660-27534810)
chr1 (14-139)||(12871604-12871729)
chr1 (11-112)||(44517157-44517258)
chr1 (11-127)||(37822355-37822471)
chr1 (11-161)||(7995570-7995721)
chr1 (12-163)||(20411532-20411683)
chr1 (11-139)||(14265267-14265395)
chr1 (11-183)||(42276299-42276466)
chr1 (11-112)||(10627010-10627111)
chr1 (11-162)||(13488546-13488699)
chr1 (10-137)||(17347584-17347709)
chr1 (19-161)||(18343575-18343717)
chr1 (13-95)||(29726608-29726690)
chr1 (11-96)||(51418040-51418124)
chr1 (21-161)||(4871046-4871186)
chr1 (11-78)||(15391262-15391329)
chr1 (14-161)||(45750439-45750586)
chr1 (14-93)||(45193639-45193718)
chr1 (11-70)||(15791285-15791344)
chr1 (16-93)||(28399336-28399414)
chr1 (10-142)||(33125814-33125946)
chr1 (11-179)||(33939023-33939180)
chr1 (21-139)||(9298434-9298551)
chr1 (29-139)||(32878691-32878798)
chr1 (15-99)||(38783090-38783175)
chr1 (13-54)||(50107926-50107967)
chr1 (18-63)||(30678315-30678359)
chr1 (67-127)||(15791554-15791614)
chr1 (10-42)||(47551177-47551209)
chr1 (14-72)||(32301388-32301447)
chr1 (14-72)||(45425485-45425544)
[»] scaffold0536 (1 HSPs)
scaffold0536 (14-195)||(2830-3010)
[»] scaffold0056 (1 HSPs)
scaffold0056 (22-138)||(74148-74264)
[»] scaffold1379 (2 HSPs)
scaffold1379 (10-128)||(1095-1213)
scaffold1379 (11-96)||(1-86)
[»] scaffold0321 (1 HSPs)
scaffold0321 (14-122)||(7137-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-128)||(404269-404385)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-142)||(35062-35194)
[»] scaffold0432 (1 HSPs)
scaffold0432 (21-183)||(2438-2600)
[»] scaffold0121 (1 HSPs)
scaffold0121 (11-161)||(13255-13411)
[»] scaffold1350 (1 HSPs)
scaffold1350 (11-91)||(1605-1685)
[»] scaffold0294 (1 HSPs)
scaffold0294 (14-137)||(4080-4202)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 24483696 - 24483931
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  24483696 cagagacgacaaaatcacaaaaacaaatgtatgaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtgat 24483795  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctca------------aaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaacca 198  Q
    ||||||||||||||||||||||||||||||||||            || || ||||||||||||| ||||||||||||||||||| ||  | ||||||||    
T  24483796 ttgtgtgtcaaaattgactccaaatcacctctcagaaaagaagaagaagaagaagaagaagaaaagggtgacaactagggtttgagaatgatagaaacca 24483895  T
Q  199 attataaaaagttgttggcatacattaatcaaatag 234  Q
    |||||||||| |||||||||| ||||||||||||||    
T  24483896 attataaaaaattgttggcatgcattaatcaaatag 24483931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 31270437 - 31270253
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||| | |||||||    
T  31270437 cagagacgacgaaattacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaataattcgaaggggtgat 31270338  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 195  Q
    || || |||||||||||| | ||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||| |||||||    
T  31270337 ttttgggtcaaaattgaccctaaatcacccatctaaaaagaataagaagaaaatggtgacatctaggatttgaaaaggagagaaa 31270253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 31462764 - 31462947
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| || ||||||||||||| | |||||||    
T  31462764 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgat 31462863  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||| |||  |||| ||||||||||||||||||||| | | ||||||| ||| ||||||    
T  31462864 ttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaatggtgacagccaaggtttgagaaggagagaa 31462947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 40013290 - 40013475
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatt---atgatagaatgaaaaacaattcggaagggt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||| ||||||||||||| | ||||    
T  40013290 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggt 40013389  T
Q  108 gatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||||| || |||||||||||| | ||||||||  ||  |||| |||||||||||||||||||| |||| ||||||| ||| ||||||    
T  40013390 gatttttgggtcaaaattgacactaaatcacc-atctgaaaagaagaagaagaaaatggtgacgactatggtttgagaaggagagaa 40013475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 14585573 - 14585387
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  || | |||||    
T  14585573 cagagacgaggaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgat 14585474  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctc---aaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||||| |||||||| |||   ||| || |||| |||||||| || ||| |||||||||||| ||| ||||||    
T  14585473 ttttgggtcaaaattgactctaaatcacccctctgaaaagaagaagacgaagaaaagggcgacgactagggtttgagaaggagagaa 14585387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 35174815 - 35174643
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||  | |||||||    
T  35174815 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgat 35174716  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || ||| |||||||| |  ||| ||| ||   |||| ||||||||||||| |||||| ||||||||||||    
T  35174715 ttttgggtcgaaattgacccttaataacccctatgaaaagaagaagaagaaaagggtgacgactagggtttga 35174643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 13701994 - 13702140
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgt 114  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |||||| || |    
T  13701994 gacgacgaaatcacaaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtgactttt 13702093  T
Q  115 gtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | |||||||||||| | |||||||| |||  |||| |||||||||||    
T  13702094 gggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 13702140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 48652459 - 48652608
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||    
T  48652459 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatt 48652558  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || |||||| ||||| | |||||||| |||  | || |||||||||||    
T  48652559 tttgggtcaaagttgaccctaaatcacccctctgacaagaagaagaagaa 48652608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 36691817 - 36691945
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||| |||||||    
T  36691817 cagagacgacgaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtgat 36691916  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || |||||||||||| | ||||||||    
T  36691917 ttttgggtcaaaattgaccctaaatcacc 36691945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 32080772 - 32080922
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||| ||||| |||||||    
T  32080772 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgat 32080871  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | ||||||||  ||  | ||||||||||||||    
T  32080872 ttttgggtcaaaattgaccctaaatcacccatctgacaacaagaagaagaa 32080922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 48401009 - 48400860
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || || | ||||| |||||||||||| || | ||||||    
T  48401009 agagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatt 48400910  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || |||||||||||| | |||||||| ||| ||||| |||||||||||    
T  48400909 tttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaagaa 48400860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 11819194 - 11819066
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||| ||||||||| ||||| |||||||    
T  11819194 cagagacgacgaaatcacaaaaacaaatgaaagaaaacataaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgat 11819095  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || |||||||||||| | ||||||||    
T  11819094 ttttgggtcaaaattgaccctaaatcacc 11819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 49628106 - 49628253
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| || ||||||||    
T  49628106 agagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatt 49628205  T
Q  112 tgtgtgtcaaaattgactc-caaatcacctctcaaaaaacaagaagaa 158  Q
    | |  |||||||||||| |  |||||||| ||| ||||| ||||||||    
T  49628206 tttaggtcaaaattgacccaaaaatcacccctctaaaaagaagaagaa 49628253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 53155453 - 53155603
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtg 115  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| || ||||||||||||| | ||||||||| ||    
T  53155453 acgacgaaattacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttg 53155552  T
Q  116 tgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtga 169  Q
     |||||||||||| | |||||||| ||| |||   |||||||||||||||||||    
T  53155553 ggtcaaaattgaccctaaatcacccctctaaa---aagaagaagaaaatggtga 53155603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 3457053 - 3456904
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  3457053 agagacgacgaaatcacaaaaacaaaggaaagaaaacaaaaaatatgttaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatt 3456954  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | ||  |||||||||||   |||||||| |||  |||| |||||||||||    
T  3456953 tttggatcaaaattgaccataaatcacccctctgaaaagaagaagaagaa 3456904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 54239040 - 54239137
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||    
T  54239040 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattt 54239137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 22485069 - 22484961
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||| ||||||| || |    
T  22485069 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttggg 22484970  T
Q  118 tcaaaattg 126  Q
    |||||||||    
T  22484969 tcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 36624712 - 36624881
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||| |||||||    
T  36624712 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtgat 36624811  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || ||||  |||||| |  ||||||| |||  ||   |||||||| |||| |||||||  ||||||||||    
T  36624812 ttttgggtcatgattgaccctgaatcacccctctgaa---aagaagaataaaagggtgacagttagggtttga 36624881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 34960879 - 34960993
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||  ||||||||||| || |||||||||     
T  34960879 agacgatgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttt 34960978  T
Q  114 tgtgtcaaaattgac 128  Q
    || ||||||||||||    
T  34960979 tgggtcaaaattgac 34960993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 38527374 - 38527236
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||| | |||||    
T  38527374 cagagacgacgaaatcataaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgat 38527275  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaa 149  Q
    || ||  |||| |||||  | |||||||| ||| |||||    
T  38527274 ttttggttcaagattgatcctaaatcacccctctaaaaa 38527236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 55090601 - 55090752
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||| ||||| |||||||    
T  55090601 cagagacgacggaatcacaaaaacaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgat 55090700  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaa 162  Q
    || || ||  ||||| || | |||||||| |||  | || ||||||||||||    
T  55090701 ttttgggttgaaattaaccctaaatcacccctctgacaagaagaagaagaaa 55090752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 4206529 - 4206679
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||||||||| |||| |  ||||||||||||||| |||||||    
T  4206529 cagagacgacgaaatcacaaaaacaaacaaaagaaaataaaaaatatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtgat 4206628  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |   |||||||||||   |||||||| ||| ||||| | |||||||||    
T  4206629 tttttgatcaaaattgaccataaatcacccctctaaaaagaggaagaagaa 4206679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 40883886 - 40884015
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | |||||||||||| |  | |||    
T  40883886 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacttattcaattaggataaaaggaaaaaacaattcgaattgatga 40883985  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| || |||||||||||| | ||||||||    
T  40883986 tttttgggtcaaaattgaccctaaatcacc 40884015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 41868313 - 41868394
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaa 93  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41868313 agagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaa 41868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 27189414 - 27189580
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaa-cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||| ||||||||||||||||| |||| |||| |||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||| || ||||    
T  27189414 agacgatgaaatcacaaaaacaaatgaaaaaaaaacagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaattcggaagagtaattt 27189513  T
Q  113 gtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtt 180  Q
     ||  ||||||||||||| |||||||| ||| | |||  |||||||||||  ||||||  ||||||||    
T  27189514 ttggatcaaaattgactctaaatcacccctctacaaa-gagaagaagaaaggggtgacggctagggtt 27189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 30156299 - 30156427
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaa-cgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||| |||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||||||| |||| || | ||||||||||||| ||||||    
T  30156299 cagagaagacgaaatcataaaaacaaaacgaaagaaatcataaaatatgtgaaatcacttattcaattaggata-aaaggaaaacaattcggaggggtga 30156397  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| || |||||||||||| | ||||||||    
T  30156398 tttttgggtcaaaattgaccctaaatcacc 30156427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 19645332 - 19645204
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| || ||||  |||||||||||||| || || |    
T  19645332 cagagacgacgtaatcacaaaaacaaaggaaaaaaaacagaaaatatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatggt 19645233  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || |  |||||||||||| | ||||||||    
T  19645232 ttttaggtcaaaattgaccctaaatcacc 19645204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 39610320 - 39610131
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg--------aaaaacaattcggaagg 105  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |        |||||||| ||||| ||    
T  39610320 agacgacaaaatcacaaaaacaaacgaaaggaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggg 39610221  T
Q  106 gtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 195  Q
    ||||||  || ||||||||||||   |||||||| |||  | || ||||||||||||  ||||||  ||||||||||| ||| |||||||    
T  39610220 gtgattattgggtcaaaattgaccataaatcacccctctgacaagaagaagaagaaaggggtgacgtctagggtttgagaaggagagaaa 39610131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 33637513 - 33637422
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| | ||||| ||||||||| ||||||    
T  33637513 agagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcttttattcaattaaggtagaaggaaaaacaaatcggaa 33637422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 34103739 - 34103802
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34103739 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 34103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 1074913 - 1075061
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  |||||| |||||||||||||||  ||| || ||||||||| ||||| ||||||||    
T  1074913 agagacgacaaaatcacgaaaacaaacgaaagaaaacagaaaacgtgtgaa-tcacttattcaattagaatataaggaaaaacaactcggatgggtgatt 1075011  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || ||||||||||||   |||||||| |||  | || |||||||||||    
T  1075012 tttgggtcaaaattgaccataaatcacccctctgacaagaagaagaagaa 1075061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 19861298 - 19861427
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaa-cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||  ||| || |||||| ||  | |||||||    
T  19861298 agagacgacgaaatcacaaaaacaaacgaaaaaaaaacaggaaatatgtgaaatcacttattcaattatga-ggaaggacaaacaactc--atgggtgat 19861394  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctc 143  Q
    || || |||||||||||| | ||||||||||||    
T  19861395 ttttgagtcaaaattgaccctaaatcacctctc 19861427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 2147839 - 2147756
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaa 92  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||| |||||    
T  2147839 gcagagacgacgaaatcacaaaaacaaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaacgaaaa 2147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 106052 - 106139
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||| | |||||||||||||||    
T  106052 gcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagggtagaatgaaaaacaa 106139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 53402732 - 53402568
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||         |||||||| |||||  |||||| ||||||||||||||| |||||||    
T  53402732 cagagacgatgaaatcacaaaaacaaacgaaagaaagcagaaaat---------cacttattgaattagaatagaaggaaaaacaattcggatgggtgat 53402642  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa-tggtgacaactagggtttga 183  Q
    || || ||||||||||||   |||||||   |  ||||| |||||||||||||  |||||| ||||||||||||    
T  53402641 ttttgggtcaaaattgaccttaaatcactcatttaaaaagaagaagaagaaaaggggtgacgactagggtttga 53402568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 4817867 - 4817949
Alignment:
Q  30 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| |||| || ||||||||||| ||| |||| ||||    
T  4817867 aaaacaaacgaaagaaaatagaaaatatgtgaaatcacctattcaattaggataaaaagaaaaacaatttggaggggtaattt 4817949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 3312555 - 3312486
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattat 79  Q
    ||||||| || ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3312555 gcagagatgatgaaataacaaaaacaaacgaaagaaaacttaaaatatgtgaaatcacttattcaattat 3312486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 4219288 - 4219229
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  4219288 agacgacgaaatcataaaaacaaacgaaagaaaactgaaaatatgtgaaaatcacttatt 4219229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 372
Target Start/End: Original strand, 24483944 - 24484010
Alignment:
Q  306 gtataacatgttactgcctagtctctaatactaactacaaaaggtcaatataacaaaatttccaagc 372  Q
    |||||||| |||||| ||||||||||||| |||||||||||| |||||||||| |||| ||||||||    
T  24483944 gtataacacgttactacctagtctctaatgctaactacaaaatgtcaatataataaaaattccaagc 24484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 55454976 - 55454922
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatca 66  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  55454976 agagacgacgatatcacaaaaacaaacgaaagaaaataaaaaatatgtgaaatca 55454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 39429516 - 39429632
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacag-aaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggt 107  Q
    |||||||||||||||||| ||||||||||||||||| || | |||| |||| |||| ||||| ||||||||  | |||| |||||||||||| || ||||    
T  39429516 gcagagacgacgaaatcaaaaaaacaaacgaaagaagactgaaaaacatgtggaaagcacttgttcaattagaaaagaaggaaaaacaattcagatgggt 39429615  T
Q  108 gatttgtgtgtcaaaatt 125  Q
    ||||| || |||||||||    
T  39429616 gattt-tgggtcaaaatt 39429632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 5327497 - 5327556
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtga-aatcacttatt 72  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  5327497 agacaacgaaatcacaaaaacaaacgaaagaaaactgaaaatttgtgataatcacttatt 5327556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 46732770 - 46732815
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||||||||||| |||| ||||  ||||||||||||||    
T  46732770 gacgaaatcacaaaaacaaaagaaataaaattgaaaatatgtgaaa 46732815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 54706715 - 54706752
Alignment:
Q  40 aaagaaaacagaaaatatgtgaaatcacttattcaatt 77  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  54706715 aaagaaaatagaaaatatgtgaaatcacttattgaatt 54706752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 47733900 - 47733932
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaac 48  Q
    |||| ||||||||||||||||||||||||||||    
T  47733900 acgatgaaatcacaaaaacaaacgaaagaaaac 47733932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 6e-59; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 12704798 - 12704615
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| | |||||||    
T  12704798 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgat 12704699  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||| ||| ||||| ||||||||||||| |||||| |||||||||||| ||| ||||||    
T  12704698 ttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaagaaaagggtgacgactagggtttgagaaggagagaa 12704615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 43474138 - 43474289
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  43474138 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgat 43474237  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaa 162  Q
    || || |||||||||||| | |||||||| ||| ||||| ||||||||||||    
T  43474238 ttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaagaaa 43474289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 5754396 - 5754227
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||| || ||||||| ||||||||||||||| || ||||||     
T  5754396 agacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttt 5754297  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || |||||||||||| | |||||||| ||| ||||| ||||||||||||||| ||||  |||||||||||    
T  5754296 tgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaagaaaatgatgacggctagggtttga 5754227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 31908829 - 31909009
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||  ||||||||||||||||||||||||     
T  31908829 agacgacgaaatcagaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttt 31908928  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||  ||||||||||||| |||||| | ||| ||||| |||||||| |||  ||||||| ||| ||||||| ||| ||||||    
T  31908929 tggatcaaaattgactctaaatcatccctctaaaaagaagaagaataaaggggtgacagctaaggtttgagaaggagagaa 31909009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 158
Target Start/End: Complemental strand, 25067963 - 25067816
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||| |||||||    
T  25067963 cagagacgacgaaatcacaaaaagaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgat 25067864  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 158  Q
    || || |||||||||||| | |||||||||||| || || ||||||||    
T  25067863 ttttgggtcaaaattgaccctaaatcacctctctaacaagaagaagaa 25067816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 38535315 - 38535465
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  | ||||| |    
T  38535315 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgct 38535414  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  |||| |||||||||||    
T  38535415 ttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 38535465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 36868119 - 36867936
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||| |||||  |||||| |||||||||||| || |||||||    
T  36868119 cagagacgacgaaatcgcaaaaacaaacgaaagaaagtagaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgat 36868020  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||| ||| | ||| |||||||||| |||||||||  ||||||||||| ||| ||||||    
T  36868019 ttttgagtcaaaattgaccctaaatcacccctctagaaagaagaagaagagaatggtgacggctagggtttgagaaggagagaa 36867936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 27095817 - 27095688
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||    
T  27095817 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtga 27095718  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| |  |||||||||||| | ||||||||    
T  27095717 tttttaggtcaaaattgaccctaaatcacc 27095688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 20561142 - 20561270
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  ||||||| ||||||||||||||| |||||||    
T  20561142 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgat 20561241  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || |||||||||||| | ||||||||    
T  20561242 ttttgggtcaaaattgaccctaaatcacc 20561270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 33012188 - 33012038
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||| | |||||    
T  33012188 cagagacgacgaaatcacaaaaacaaacgaaacaaaactgaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtgat 33012089  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | ||||||||  ||  |||| |||||||||||    
T  33012088 ttttgggtcaaaattgaccctaaatcacccgtctgaaaagaagaagaagaa 33012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 7072958 - 7073110
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||| ||||| ||||||| ||||| |||    
T  7072958 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgat 7073057  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    || || |||||||||||| | |||||||| |||  |||| |||||||||||||    
T  7073058 ttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaa 7073110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 9978679 - 9978851
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||| | | |||||||    
T  9978679 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgat 9978778  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || ||||||||||||   |||||||| |||   ||| ||||| ||||||  |||||| |||| |||||||    
T  9978779 ttttgggtcaaaattgaccttaaatcacccctctggaaagaagaaaaagaaaggggtgacgactaaggtttga 9978851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 35333616 - 35333457
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||  | |||||||    
T  35333616 cagaaacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaattcttaggggtgat 35333517  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgac 170  Q
    || || |||||||||||  | |||||| || | ||| || |||||||||||| |||||||    
T  35333516 ttttgggtcaaaattgatcctaaatcatctttgaaagaaaaagaagaagaaagtggtgac 35333457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 44942393 - 44942240
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| ||||| |||||||||     
T  44942393 agacgacgaaatcacaaaaacaaacaaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttt 44942294  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggt 167  Q
    || ||||||||||||   ||||||||  ||  |||| |||||||||||| ||||    
T  44942293 tgggtcaaaattgaccataaatcacccatctgaaaagaagaagaagaaagtggt 44942240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 11937868 - 11938019
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatag-aatgaaaaacaattcggaagggtga 109  Q
    ||||||||| ||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  11937868 cagagacgaagaaattacaaaaatcaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtga 11937967  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||| || |||||||||||| | |||||||| |||  |||| |||||||||||    
T  11937968 tttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 11938019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 13740672 - 13740783
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||  ||||||||    
T  13740672 gagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgattt 13740771  T
Q  113 gtgtgtcaaaat 124  Q
     || ||||||||    
T  13740772 ttgggtcaaaat 13740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 15919985 - 15919835
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||    
T  15919985 gcagagatgacgaaatcacaaaaacaaacgaaagaaatt-gaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtga 15919887  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||| || |||||||||||||| |||||||| ||| || || ||| |||||||    
T  15919886 tttttgggtcaaaattgactctaaatcacccctctaataagaaggagaagaa 15919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 10287019 - 10287132
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||  ||||||||| |||||||||     
T  10287019 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggata-aaagaaatgcaattcggaggggtgatttt 10287117  T
Q  114 tgtgtcaaaattgac 128  Q
    | |||||||||||||    
T  10287118 tatgtcaaaattgac 10287132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 22597246 - 22597061
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| || ||||    
T  22597246 cagagacgacaaaatcataaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgat 22597147  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaaga--aaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || ||||||||||||   |||||||| |||  | || || |||||||  ||| |||||| |||||||||||| ||| ||||||    
T  22597146 ttttgggtcaaaattgaccttaaatcacccctctgacaagaaaaagaagaagaaagggtgacgactagggtttgagaaggagagaa 22597061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 32015333 - 32015181
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcact----tattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    |||| |||||||||| || ||||||||| ||||| |||||    
T  32015333 gagacgacgaaatcacaaaaacaaatgaatgaaaacagaaaatatgtgaaatcacttatttattgaattatgatataaggaaaaacaactcggaggggtg 32015234  T
Q  109 atttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    |||| || |||||||||||| | |||||||| ||| || || |||||||||||    
T  32015233 atttttgggtcaaaattgaccctaaatcacccctctaacaaaaagaagaagaa 32015181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 28261898 - 28262055
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattc-----aattatgatagaatgaaaaacaattcggaagg 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||     ||||||||||||| ||||||||||||||| |     
T  28261898 cagagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcacatattcaattaaattatgatagaaggaaaaacaattcggatga 28261997  T
Q  106 gtgatttgtgtgtcaaaattgactccaaatcacc--tctcaaaaaacaagaagaagaa 161  Q
    ||||||| || |||||||||||| | ||||||||  ||| ||| || |||||||||||    
T  28261998 gtgatttttgggtcaaaattgaccctaaatcacccatctgaaagaagaagaagaagaa 28262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 28231107 - 28231208
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||||||| |||||||    
T  28231107 cagagacgatggaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtgat 28231206  T
Q  111 tt 112  Q
    ||    
T  28231207 tt 28231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 9689993 - 9690133
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtca 120  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||||| || ||||    
T  9689993 gaaatcacaaaaacaaacgaaaaaaaacaaaaaatatgtgagatcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtca 9690092  T
Q  121 aaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||   |||||||| |||  |||| |||||||||||    
T  9690093 aatttgaccttaaatcacccctctgaaaagaagaagaagaa 9690133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 32314553 - 32314461
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  32314553 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaattcggaa 32314461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 34416774 - 34416888
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||| || ||||||     
T  34416774 agacgacgaaatcacaaaaacaaacaaaaaaaaactgaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcggagggatgatttt 34416873  T
Q  114 tgtgtcaaaattgac 128  Q
    |  ||||||||||||    
T  34416874 ttggtcaaaattgac 34416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 4604317 - 4604434
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  |||||| ||||||||| ||| | | || ||    
T  4604317 cagagacgacgaaatcacaaaaacaatcgaaagaaagcagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaat 4604416  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||||||||||    
T  4604417 ttttgggtcaaaattgac 4604434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 4426669 - 4426759
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 102  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  4426669 agagacgacgaaatcaaaaaaacaaatgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcgga 4426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 4739440 - 4739339
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||| ||| ||| ||||||||| ||||| |||||||    
T  4739440 cagagacgacgaaatcacaaaaacaaacggaaaaaaacagaaaatatgtgaaattacttatttaattaggatggaaggaaaaacaactcggaggggtgat 4739341  T
Q  111 tt 112  Q
    ||    
T  4739340 tt 4739339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 17268136 - 17268251
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| | || ||||    
T  17268136 cagagacgacgaaatcacaaaa-caaacaaaa-aaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaagggatgat 17268233  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||||||||||    
T  17268234 ttttgggtcaaaattgac 17268251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 18089407 - 18089540
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||| | ||||||    
T  18089407 agagacgacgaaatcacaaaaactaa----agaaaacagaaaatatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtgatt 18089502  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaa 149  Q
    | ||  ||||||||||| | |||||||| ||| |||||    
T  18089503 tttggatcaaaattgaccctaaatcacccctctaaaaa 18089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 34471074 - 34470912
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagg--gtgatt 111  Q
    |||||| || || ||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| || |||||||||||| ||  ||||||    
T  34471074 agacgaagacattacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatt 34470975  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaacta 175  Q
    | || |||||||||||| || || | || ||| ||||| ||||| ||||||| |||||| ||||    
T  34470974 tttgggtcaaaattgac-cctaaacccccctctaaaaagaagaaaaagaaaagggtgacgacta 34470912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 4732181 - 4732065
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||| ||||  ||| |   |||||||||    
T  4732181 cagagacgatgaaatcacaaaaacaaacgaaa-aaaacaaaaagtatgtgaaatcacttattcaattaggatagaaggaaatgcaactaacaagggtgat 4732083  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||||||||||    
T  4732082 ttttgagtcaaaattgac 4732065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 17767566 - 17767689
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgt 114  Q
    ||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||| ||||| |||| || ||||||||| ||| | |||||| || |    
T  17767566 acgacgaaatcacaaaatcaaatgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttct 17767664  T
Q  115 gtgtcaaaattgactccaaatcacc 139  Q
    | |||||||||||||| ||||||||    
T  17767665 gggtcaaaattgactctaaatcacc 17767689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 13879017 - 13879091
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 86  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13879017 cagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaa 13879091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 14019142 - 14019216
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 86  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14019142 cagagacgac-aaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaa 14019216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12891131 - 12891187
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactt 69  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12891131 gagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcactt 12891187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 34963105 - 34963261
Alignment:
Q  40 aaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||| || | |||||||||| |  |||||||||||| | |||| |||    
T  34963105 aaagaaaacagaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaaatcag-agggtgatttttaggtcaaaattgacccaaaattacc 34963203  T
Q  140 tctcaaaaaacaa---gaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
     |||  | |||||   |||||||||| ||||||||  |||||||| | ||| ||||||    
T  34963204 cctctgacaacaagaggaagaagaaagtggtgacagttagggtttcagaaggagagaa 34963261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6431402 - 6431483
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||  ||| || |||||||||    
T  6431402 acgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtggaaatcacttatttaattagaatataaggaaaaacaa 6431483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 41797702 - 41797649
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcac 67  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41797702 agacgacgaaatcacaaaaacaaacgaaagaaaacatataatatgtgaaatcac 41797649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 17792578 - 17792483
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| || ||  | |||| ||||||||||  ||| |||||||||    
T  17792578 gacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaaatcgcttatttaactagaagagaaagaaaaacaatatggaggggtgattt 17792483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 11581141 - 11581266
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| || |||||||||||| ||  |  | |||| ||||||||||||| |  ||| ||||    
T  11581141 agacgacgaaatcacaaaaacaaaccaaagaaaactaaaaatatatgaaaatcacttatttaacaaaaagagaaagaaaaacaattcgaagaggttattt 11581240  T
Q  113 gtgtgtcaaaattgactccaaatcacc 139  Q
     || ||||||||| |||||||||||||    
T  11581241 -tgggtcaaaattaactccaaatcacc 11581266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 38384481 - 38384602
Alignment:
Q  40 aaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacc 139  Q
    |||| ||||| |||| ||||||||||||||||||||||| | || || ||||||||| |||||   ||||||| || |||||||||||| | ||||||||    
T  38384481 aaaggaaacaaaaaaaatgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacc 38384580  T
Q  140 tctcaaaaaacaagaagaagaa 161  Q
     ||| || ||||| || |||||    
T  38384581 cctctaacaacaacaacaagaa 38384602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 20607332 - 20607374
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  20607332 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaa 20607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 17116415 - 17116464
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  17116415 agacgacgaaatcacataaacaaacgaaagaagactgaaaatatgtgaaa 17116464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 11798537 - 11798643
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtca 120  Q
    ||||||||||||||||| |||||||||  ||||||||| ||||| ||||||| ||||| |||| || ||||| |||   ||| ||||||||| || ||||    
T  11798537 aaatcacaaaaacaaacaaaagaaaactaaaaatatgtggaaattacttatttaattaggatataaggaaaagcaacatggaggggtgattt-tgggtca 11798635  T
Q  121 aaattgac 128  Q
    ||||||||    
T  11798636 aaattgac 11798643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 15261425 - 15261524
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa--tcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||| |||||||||||||| ||| ||||||||||| |||| ||||| |||  ||||||||| |  ||  | |||| ||||||||||||||||||||||||    
T  15261425 agacaacgaaatcacaaaatcaa-cgaaagaaaactgaaattatgtaaaaaatcacttatttagctaaaagagaaagaaaaacaattcggaagggtgatt 15261523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20598648 - 20598695
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtga 61  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||    
T  20598648 agacgacgaaaccacaaaaacaaacgtaataaaactgaaaatatgtga 20598695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15028323 - 15028372
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||| ||||||  ||||||||||||||||| || ||||||||||||||    
T  15028323 agacgatgaaatcgaaaaaacaaacgaaagaagactgaaaatatgtgaaa 15028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 5684476 - 5684293
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  5684476 cagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgat 5684377  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||| ||  ||||| || |||||||||| | ||||||||||||||| ||||| ||||||    
T  5684376 ttttgcgtcaaaattgaccctaaatcacccctttaaaaagaataagaagaaaaggatgacaactagggtttaaaaaggagagaa 5684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 5709526 - 5709343
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  5709526 cagagacaacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgat 5709427  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||| ||  ||||| || |||||||||| | ||||||||||||||| ||||| ||||||    
T  5709426 ttttgcgtcaaaattgaccctaaatcacccctttaaaaagaataagaagaaaaggatgacaactagggtttaaaaaggagagaa 5709343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 42603782 - 42603929
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  42603782 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttt 42603881  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||||||||||||   |||||||| ||| ||||| |||||||||||    
T  42603882 tgagtcaaaattgaccataaatcaccgctctaaaaagaagaagaagaa 42603929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 17473733 - 17473916
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  17473733 cagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgat 17473832  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |  |||||||||||| | |||||||| | |  |||| || |||||||||| ||||||||||||||||||| ||| ||||||    
T  17473833 tttttggtcaaaattgaccctaaatcaccccactgaaaagaataagaagaaaagggtgacaactagggtttgagaaggagagaa 17473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 17579481 - 17579298
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  17579481 cagagacgacaaaatcacaaaaacaaatgaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgat 17579382  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |  |||||||||||| | |||||||| | |  |||| || |||||||||| ||||||||||||||||||| ||| ||||||    
T  17579381 tttttggtcaaaattgaccctaaatcaccccactgaaaagaataagaagaaaagggtgacaactagggtttgagaaggagagaa 17579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 45457566 - 45457741
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||    
T  45457566 cagagacgatgaaatcacgaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgat 45457665  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaag---aagaagaaaatggtgacaactagggtttga 183  Q
    || || |||||||||||| | |||||||| ||| ||||| |||   |||||||||  |||||||||||||||||||    
T  45457666 ttttgcgtcaaaattgaccctaaatcacccctctaaaaagaagaaaaagaagaaaggggtgacaactagggtttga 45457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 1281147 - 1281322
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||    
T  1281147 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtgat 1281246  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc--tctcaaaa-aacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || |  |||||||| ||| | ||||||||  ||| |||| || ||| ||||||||| |||||||||||||||||||    
T  1281247 tttttggtcaaaatggaccctaaatcacccatctgaaaagaataagtagaagaaaagggtgacaactagggtttga 1281322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 28664922 - 28665050
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  28664922 cagagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgat 28665021  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||  | |||||||||||| | ||||||||    
T  28665022 tttagggtcaaaattgaccctaaatcacc 28665050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 17509214 - 17509399
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||| || |||||| ||||||| ||||||||    
T  17509214 cagagacgacaaaatcacaaaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgg-agggtgat 17509312  T
Q  111 ttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |  |||||||||||| | ||||||  ||||| |||| || ||||||||||||| ||||||||||||||||||| ||| ||||||    
T  17509313 tttttggtcaaaattgaccctaaatcatccctctgaaaagaagaagaagaagaaaagggtgacaactagggtttgagaaggagagaa 17509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 17544000 - 17543815
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||| || |||||| ||||||| ||||||||    
T  17544000 cagagacgacaaaatcacaaaaacaaattaaaggaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgg-agggtgat 17543902  T
Q  111 ttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |  |||||||||||| | ||||||  ||||| |||| || ||||||||||||| ||||||||||||||||||| ||| ||||||    
T  17543901 tttttggtcaaaattgaccctaaatcatccctctgaaaagaagaagaagaagaaaagggtgacaactagggtttgagaaggagagaa 17543815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 46026039 - 46026189
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||| ||||||| ||||||||||||||| | |||||    
T  46026039 cagagacgacgaaataacaaaaacaaacgaaagaaaacaaaaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgat 46026138  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  |||| |||||||||||    
T  46026139 ttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 46026189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 9785428 - 9785300
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||    
T  9785428 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgat 9785329  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || |||||||||||| | ||||||||    
T  9785328 ttttgggtcaaaattgaccctaaatcacc 9785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 11833130 - 11832943
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga-agggtga 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| |||||||||||||||  ||||||    
T  11833130 cagagacgacgaaatcacaaaaacaaacgaaagaatacagaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggagggggtga 11833031  T
Q  110 tttgtgtgtcaaaattgactccaaatca--cctctcaaaa-aacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||| || ||||||||||||   ||||||  ||||| |||| || ||||||||||||  | ||||  ||||||||||| ||| ||||||    
T  11833030 tttttgggtcaaaattgaccataaatcatccctctgaaaagaagaagaagaagaaagagatgacggctagggtttgagaaggagagaa 11832943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 10574489 - 10574342
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||| || ||||||||||||||| |||||||||     
T  10574489 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttt 10574390  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||||||||| | ||||||||  || ||||| ||||| |||||    
T  10574389 tgagtcaaaattgaccctaaatcacccatctaaaaagaagaaaaagaa 10574342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21603573 - 21603424
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| || ||||| |    
T  21603573 cagagacgacaaaatcacaaaaacaaaggaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgct 21603474  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| ||| ||||  |||||||||||    
T  21603473 ttttg-gtcaaaattgaccctaaatcacccctctaaaacaaagaagaagaa 21603424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 36579322 - 36579472
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||| |||||||    
T  36579322 cagagacgacgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgat 36579421  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||  | |||||||||||| | |||||| | |||  |||| |||||||||||    
T  36579422 tttcgggtcaaaattgaccctaaatcatccctcttaaaagaagaagaagaa 36579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 2622700 - 2622585
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||| | |||||||     
T  2622700 agacgacgaaatcacaaaaacaaacgcaagaaaacagaaaatatctgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtgatttt 2622601  T
Q  114 tgtgtcaaaattgact 129  Q
    || |||||||||||||    
T  2622600 tgggtcaaaattgact 2622585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 39532988 - 39533134
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||  | ||||||     
T  39532988 agacgacgaaatcacgaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcagagagatgatttt 39533087  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||||||||| | |||||||| ||| ||||| ||||| |||||    
T  39533088 tgggtcaaaattgaccctaaatcacc-ctctaaaaagaagaaaaagaa 39533134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 27535568 - 27535395
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat--gtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||  |||||||||||||| ||||||  |||||| ||||||||||||||| ||||||    
T  27535568 agagacgacaaaatcacaaaaacaaatgaaataaaacagaaaatatatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtga 27535469  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    ||| ||  | ||||||||| | |||||||| |||   ||| ||||||||||||| |||||| ||||||||||||    
T  27535468 tttttggataaaaattgaccctaaatcacccctctgtaaaaaagaagaagaaaagggtgacgactagggtttga 27535395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 10094549 - 10094460
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  10094549 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaa 10094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 21990773 - 21990644
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||||||||| ||||||    
T  21990773 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtga 21990674  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| |  |||||||||||| | ||||||||    
T  21990673 tttttcagtcaaaattgaccctaaatcacc 21990644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 32740862 - 32740714
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||   |||||||||    
T  32740862 gagacgacgaaatcacaaaaatcaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgagggggtgattt 32740763  T
Q  113 gtgt-gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
     | | |||||||||||||| |||||||| |||  |||| |||||||||||    
T  32740762 ttttggtcaaaattgactctaaatcacc-ctctgaaaagaagaagaagaa 32740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 42644778 - 42644637
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtc 119  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||  | | ||||||| || |||    
T  42644778 cgaaatcacaaaaacaaacgaaagaaaacagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtc 42644679  T
Q  120 aaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||||||||  | |||||||| |||  |||| |||||||||||    
T  42644678 aaaattgatcctaaatcacccctctgaaaagaagaagaagaa 42644637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 6667506 - 6667321
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaa-ttatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||  ||||||  |||||||||||||  ||||||    
T  6667506 cagagacgacgaaatcacagaaacaaac-aaacaaaacagaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtga 6667408  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaaga--aaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||| || |||||||||||| | |||||||  ||| ||||| ||||||||||  ||| ||||||  ||||||||||| ||| ||||||    
T  6667407 tttttgggtcaaaattgaccctaaatcactcctctaaaaagaagaagaagaagaaagggtgacggctagggtttgagaaggagagaa 6667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 15674622 - 15674712
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgg 101  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  15674622 cagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 48304406 - 48304557
Alignment:
Q  14 agacgacgaaatcacaaaaa--caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| | |||||||||||||||||||| ||||| | ||||| ||||||||| ||||||||    
T  48304406 agacgacgaaatcacaaaaaaacaaactaaagaaaacagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatt 48304505  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    | || |||||||||||| | |||||||| |||  |||| ||||| |||||||    
T  48304506 tttgggtcaaaattgaccctaaatcacccctctgaaaagaagaaaaagaaaa 48304557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 24320232 - 24320350
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||| ||| | | ||||    
T  24320232 gcagagacgatgaaatcacaaaaacaaacaaaagaaaacaaaaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaactcgaatgagtga 24320331  T
Q  110 tttgtgtgtcaaaattgac 128  Q
    ||| || ||||||||||||    
T  24320332 tttttgagtcaaaattgac 24320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 43847181 - 43847083
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||  | ||||||||||||||| ||||||    
T  43847181 cagagacgacgaaatcaccaaaacaaacgaaggaaaacagaaaatatgtgaaatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 41288069 - 41287918
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| | |||||  | ||||| ||||||    
T  41288069 cagagacgacaaaatcactaaaacaaacgaaaggaaacagaaaatatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtga 41287970  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||  || |||||||||||| | |||||||| ||| || || |||||||||||    
T  41287969 ttattgggtcaaaattgaccctaaatcacccctctaagaagaagaagaagaa 41287918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 22747517 - 22747645
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||| |||||||||||||| ||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| | ||||||| | ||| ||||||    
T  22747517 gcagagacggcgaaatcacaaaaataaatgaaagaaaacataaaatatgtcaaatcacttattcaattaggatagaa-ggaaaacaacttggaggggtga 22747615  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| || |||||||||||| | ||||||||    
T  22747616 tttttgggtcaaaattgaccctaaatcacc 22747645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 4621376 - 4621508
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||| || | |||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||| ||||| ||||||||| ||| ||| ||||    
T  4621376 gcagagatgatggaatcacaaaaacaaacgaaagaaaactgaaaacatatgaaatcgcttattcaattatggtagaaggaaaaacaactcgaaagagtga 4621475  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctct 142  Q
    ||| |  |||||||||||||| |||| ||||||    
T  4621476 tttttaggtcaaaattgactctaaataacctct 4621508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 45482175 - 45482048
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||| |||||||||||||| ||  || |||||||||||||||||||||| ||||| ||||||| ||||||||  ||||| |||||||    
T  45482175 cagagacgacgaaatcataaaaacaaacgaaacaacgcataaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgat 45482076  T
Q  111 ttgtgtgtcaaaattgactccaaatcac 138  Q
    ||  | |||||||||||| | |||||||    
T  45482075 tttggggtcaaaattgaccctaaatcac 45482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 21954827 - 21954956
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||| | |||    
T  21954827 gcagagacgacgaaatcacaaaaacagacgaaagaaaactgacaatatgtggaaatcatttatttaattaggatagaatgaaaaacaactcggatgagtg 21954926  T
Q  109 atttgtgtgtcaaaattgactccaaatcacc 139  Q
    |||| || || ||||||||| | ||||||||    
T  21954927 attt-tgggttaaaattgaccctaaatcacc 21954956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 3266499 - 3266424
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 86  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  3266499 cagagacgacaaaatcacaaaaataaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaa 3266424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 32643123 - 32643056
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  32643123 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttgttcaatta 32643056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 9719983 - 9720076
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaa-cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 103  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  9719983 cagagatgacgaaatcacaaaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaa 9720076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 14657830 - 14657934
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaa--atatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggt 107  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||| ||||||||||||| ||||||| ||||||||  |||||  |||    
T  14657830 gcagagacgacgaaatcacaaaaacaaacaaaagaaaactgaaaatatatgtgaaataacttattcaattaagatagaaggaaaaacagctcggattggt 14657929  T
Q  108 gattt 112  Q
    |||||    
T  14657930 gattt 14657934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 26161091 - 26161038
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaat 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26161091 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaat 26161038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 36719562 - 36719620
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaa--tatgtgaaatcac 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  36719562 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttatgtgaaatcac 36719620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 39707399 - 39707273
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||||||||| |||||  |||||||  | ||||| ||||||| ||||| ||||||| ||||||||| |||||  | |||||    
T  39707399 gagacgacgaaatcacaaaaacaaacgaatgaaaagtgaaaatacatggaaataacttatttaattaggatagaaagaaaaacaactcggagtgatgatt 39707300  T
Q  112 tgtgtgtcaaaattgactccaaatcacc 139  Q
    | || |||||||||||| | ||||||||    
T  39707299 t-tgggtcaaaattgaccctaaatcacc 39707273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 37376043 - 37376160
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatg------tgaaatcacttattcaattatgatagaatgaaaaacaattcggaaggg 106  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||      ||||| |||||||||||||| ||||||| |||||| |||||| | |||    
T  37376043 gagacgacaaaatcacataaacaaacgaaagaaaatagaaaatatgagaaactgaaaccacttattcaatta-gatagaaggaaaaataattcgaagggg 37376141  T
Q  107 tgatttgtgtgtcaaaatt 125  Q
    |||| | || |||||||||    
T  37376142 tgatctttgagtcaaaatt 37376160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 40761699 - 40761659
Alignment:
Q  34 caaacgaaagaaaacagaaaatatgtgaaatcacttattca 74  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  40761699 caaacgaaagaaaacataaaatatgtgaaatcacttattca 40761659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 9137070 - 9136979
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcg 100  Q
    |||||||||||| ||||||||||| ||||||||||| || | ||||||||| ||||||||| | |||||   | |||| |||||||||||||    
T  9137070 gcagagacgacggaatcacaaaaagaaacgaaagaagacgggaaatatgtgaaaatcacttttccaattgaaaaagaaggaaaaacaattcg 9136979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 6646610 - 6646652
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  6646610 gaaatcacaaaatcaaacgaaagaaaactgaaaatatgtgaaa 6646652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 15674741 - 15674807
Alignment:
Q  117 gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    |||||||||||| | |||||||| |||  |||| ||||||||||||| |||||| ||||||||||||    
T  15674741 gtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaagggtgacgactagggtttga 15674807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 29352345 - 29352275
Alignment:
Q  23 aatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaa 92  Q
    |||||| ||||||||||||||||||| || ||||||| ||||||||||||| ||||| |||| ||| ||||    
T  29352345 aatcacgaaaacaaacgaaagaaaactgagaatatgtggaaatcacttatttaattaggatataataaaaa 29352275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 39990187 - 39990236
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||| |||| ||||| ||||||||||||||||||| ||||||||||||||    
T  39990187 agacaacgatatcacgaaaacaaacgaaagaaaactgaaaatatgtgaaa 39990236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 33476665 - 33476724
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttatt 72  Q
    |||||||||||||| ||||||||||| || ||||  |||||||||| |||||||||||||    
T  33476665 agacgacgaaatcataaaaacaaacggaataaaattgaaaatatgtggaaatcacttatt 33476724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 17223204 - 17223163
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||||| |||||||||| | ||||||||||||||    
T  17223204 aaatcacaaaaacagacgaaagaaacctgaaaatatgtgaaa 17223163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 10623909 - 10623861
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtga 61  Q
    |||| ||| ||| ||||||||||||||||||||||| |||| |||||||    
T  10623909 gagatgactaaaccacaaaaacaaacgaaagaaaaccgaaactatgtga 10623861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 14810712 - 14810626
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg--aaatcacttattcaattatgatagaatgaaaaacaattc 99  Q
    ||||||||||||||| ||||| ||||||||||| | | |||||||||  |||||||||||| || ||  | |||| ||||||||||||    
T  14810712 agacgacgaaatcac-aaaaccaacgaaagaaagctgtaaatatgtgaaaaatcacttatttaactaaaagagaaagaaaaacaattc 14810626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 15257707 - 15257621
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg--aaatcacttattcaattatgatagaatgaaaaacaattc 99  Q
    ||||||||||||||| ||||| ||||||||||| | | |||||||||  |||||||||||| || ||  | |||| ||||||||||||    
T  15257707 agacgacgaaatcac-aaaaccaacgaaagaaagctgtaaatatgtgaaaaatcacttatttaactaaaagagaaagaaaaacaattc 15257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 17221754 - 17221648
Alignment:
Q  32 aacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactc 130  Q
    ||||||||||||||| | ||||||||||| ||||||  ||||||||||   || |||| |||||||||| || ||||||||| || ||||||||| |||     
T  17221754 aacaaacgaaagaaacctgaaaatatgtgaaaatcatatattcaattagagtataatg-aaaacaattcagaggggtgatttttg-gtcaaaattcacta 17221657  T
Q  131 caaatcacc 139  Q
     ||||||||    
T  17221656 taaatcacc 17221648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 27705081 - 27705141
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    |||||||| ||||||||||| ||||||||||| || | ||||||| || ||||||||||||    
T  27705081 gagacgacaaaatcacaaaatcaaacgaaagagaataaaaaatatatgaaaatcacttatt 27705141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 37714586 - 37714558
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaa 42  Q
    |||||||||||||||||||||||||||||    
T  37714586 agacgacgaaatcacaaaaacaaacgaaa 37714558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 17699664 - 17699481
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  17699664 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgat 17699565  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | |||||||   ||  |||| ||||||||||||| |||||| |||||||||||| ||| ||||||    
T  17699564 ttttgggtcaaaattgaccctaaatcactcatctgaaaagaagaagaagaaaagggtgacgactagggtttgagaaggagagaa 17699481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 17331439 - 17331289
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  17331439 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgat 17331340  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  | ||||||||||||||    
T  17331339 ttttgggtcaaaattgaccctaaatcacccctctgacaacaagaagaagaa 17331289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 28040740 - 28040567
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||| ||| |||||||    
T  28040740 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgat 28040641  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaa 184  Q
    || || ||||||||||||   |||||||| |||  |||| |||||||||||| |||||||  |||| |||||||    
T  28040640 ttttgggtcaaaattgaccgtaaatcacccctctgaaaagaagaagaagaaagtggtgacggctagagtttgaa 28040567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 33164478 - 33164628
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| | |||||    
T  33164478 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgat 33164577  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || ||||||||||||   |||||||| |||  | ||||| ||||||||    
T  33164578 ttttgagtcaaaattgaccataaatcacccctctgacaacaacaagaagaa 33164628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 32347724 - 32347899
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||| ||||||    
T  32347724 cagaaacgacgaaatcacaaaaacaaacgaaataaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtga 32347823  T
Q  110 tttgtgtgtcaaaattgactccaaatca--cctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    ||| || |||||| ||||| | ||||||  ||||| |||| | |||||||||| |||||||||  |||||||||||    
T  32347824 tttttgggtcaaagttgaccctaaatcacccctctgaaaagaaaagaagaagagaatggtgacggctagggtttga 32347899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 12439649 - 12439795
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtg 115  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||||| |     
T  12439649 acgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatatgaaatcacttattcaactaggatagaatgaaaaacaattcgg-agggtgattttta 12439747  T
Q  116 tgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
     |||||||||  | | |||||||||||||||||| |||||||| ||||    
T  12439748 ggtcaaaattatccctaaatcacctctcaaaaaagaagaagaaaaaaa 12439795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 17096249 - 17096433
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg---aaaaacaattcggaagggt 107  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |   |||||||| | ||| ||||    
T  17096249 cagagacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggt 17096348  T
Q  108 gatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 195  Q
    ||||  || |||||||||||| | |||||||| |||     ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  17096349 gattattgggtcaaaattgaccctaaatcacccctc---tgacaagaagaagaaatgggtgacaactagggtttgagaagaagagaaa 17096433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 6281154 - 6281005
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| |||||| ||||| || ||||||||    
T  6281154 agagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatt 6281055  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || ||||||||||||   |||||||| ||| ||||| |||||||||||    
T  6281054 tttgggtcaaaattgaccataaatcacccctctaaaaagaagaagaagaa 6281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 6635361 - 6635245
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga-agggtga 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || |||||||    
T  6635361 cagagacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtga 6635262  T
Q  110 tttgtgtgtcaaaattg 126  Q
    ||| || ||||||||||    
T  6635261 tttttgggtcaaaattg 6635245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 29097897 - 29097717
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||| |     
T  29097897 agacgacgaaatcacaaaaacaaactaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctt 29097798  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |||||||||||| | |||||||| ||   | || ||||||||||||  |  ||| |||||||||||| ||| ||||||    
T  29097797 tgggtcaaaattgaccctaaatcacccctaggacaagaagaagaagaaagggtcgacgactagggtttgagaaggagagaa 29097717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 27241172 - 27241059
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| || |||||||||     
T  27241172 agacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttt 27241073  T
Q  114 tgtgtcaaaattga 127  Q
    || |||||||||||    
T  27241072 tgggtcaaaattga 27241059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 39179838 - 39179939
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||| |||||||    
T  39179838 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaataattcggaggggtgat 39179937  T
Q  111 tt 112  Q
    ||    
T  39179938 tt 39179939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 43493972 - 43493808
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaa 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||  |||||||| ||  ||||    
T  43493972 aaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaa 43493873  T
Q  122 aattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaa 186  Q
    ||||||| | |||||||| ||| ||||| ||||| |||| |  |||||| |||  ||||||||||    
T  43493872 aattgaccctaaatcacccctctaaaaagaagaaaaagagaggggtgacgactgaggtttgaaaa 43493808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 178115 - 178246
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || |||| |||| |||||  |||||    
T  178115 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatataaggaaacacaactcggagaggtga 178214  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctc 141  Q
    ||| || ||||||||||||   ||||||||||    
T  178215 tttttgagtcaaaattgaccttaaatcacctc 178246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 34431168 - 34431045
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||| | |||||||||     
T  34431168 agacgacgaaatcacaaaatcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttt 34431069  T
Q  114 tgtgtcaaaattgactccaaatca 137  Q
    || |||||||||||| | ||||||    
T  34431068 tgggtcaaaattgaccctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 42609255 - 42609125
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||| | |||||    
T  42609255 cagagacgacaaaatcacaaaaacaaacaaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtgat 42609156  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctc 141  Q
    || |  |||||||||||| | ||||||||||    
T  42609155 ttttaggtcaaaattgaccctaaatcacctc 42609125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 3740467 - 3740319
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| || || |||||    
T  3740467 agagacgacgaaatcacacaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaa-ggaaaacaattcagatggatgatt 3740369  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || ||||||||| || | |||||||  |||  |||| |||||||||||    
T  3740368 tttgagtcaaaattaaccctaaatcacacctctgaaaagaagaagaagaa 3740319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 20483294 - 20483147
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattc-aattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||  ||| || ||||||||||| || ||||||||||    
T  20483294 agacgacgaaatcacaaaaacaaacaaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttgg-agggtgattt 20483196  T
Q  113 gtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
     || |||||||||||  | |||||||| ||| ||||| |||||||||||    
T  20483195 ttgggtcaaaattgatcctaaatcacccctccaaaaagaagaagaagaa 20483147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 42396522 - 42396639
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||  ||||| |||||| || | ||||    
T  42396522 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcgcttattcaattaagatagaagaaaaaataattcgaaaagatgat 42396621  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||||||||||    
T  42396622 ttttgggtcaaaattgac 42396639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26295067 - 26295218
Alignment:
Q  11 cagagacgacgaaatcac-aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||||||  |||| ||||||||| ||||||||| ||||||| ||| |||||||||||||||| | ||||||| |||||||| |||||| ||||||    
T  26295067 cagagacgacgatctcactaaaaacaaaagaaagaaaatagaaaatttgttaaatcacttattcaataaggatagaaggaaaaacacttcggaggggtga 26295166  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    ||| ||  ||||||||||| | |||||||||||| ||||  |||||||||||    
T  26295167 tttttggatcaaaattgaccctaaatcacctctctaaaatgaagaagaagaa 26295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 3079315 - 3079413
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| || ||||||||| ||||| ||||||    
T  3079315 cagagacgacaaaatcacaaaaacaaacgaaaaaaagcagaaaatatgttaaatcacttattcaattatgatataaggaaaaacaaatcggaggggtga 3079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 12891788 - 12891706
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaa 92  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||    
T  12891788 gcagagacaacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaa 12891706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 17687317 - 17687215
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||| |||||  |||||    
T  17687317 gcagagacaacgaaatcacaaaaacaaacaaaagaaaactgaaaatatgtgaaataacttattcaattaagatagaaggaaaaacaactcggattggtga 17687218  T
Q  110 ttt 112  Q
    |||    
T  17687217 ttt 17687215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 23882126 - 23882254
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||  ||||||| ||||||||||| |||  | ||||    
T  23882126 cagagacgacgaaatcacaaaaacaaacgatagaaaatataaaatatgtcaaatcacttattcaatttggatagaaagaaaaacaatttggattgatgat 23882225  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || ||  ||||||||||| | ||||||||    
T  23882226 ttttgaatcaaaattgaccctaaatcacc 23882254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 18653894 - 18653808
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||| ||  ||||||||    
T  18653894 gcagagacgacgaaatcacaaaaacaaacgaaagaaatcagaaaatatacgaaatcacttattcaattaggatataagaaaaaacaa 18653808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 39531422 - 39531528
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgt 118  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||| ||||| || |||||| || ||    
T  39531422 acgaaatcacaaaaacaaacaaaagaaaacagaaa-tatgtgaaatcacttattcaattacgatagaa-ggaaaacaactcggagggatgattt-tgggt 39531518  T
Q  119 caaaattgac 128  Q
    ||||||||||    
T  39531519 caaaattgac 39531528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 981038 - 981186
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||| |||| ||||| ||||||   ||  |||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||| |||    
T  981038 cagagacgacaaaatcgcaaatacaaatgaaaga---cattaaatatgtgaaatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgat 981134  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaa 162  Q
    |  || |||||||||||  | ||||||||  || ||||| ||||||||||||    
T  981135 tattgggtcaaaattgatcctaaatcacccttctaaaaagaagaagaagaaa 981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 6681887 - 6682012
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||| ||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||  |||| || ||||||||| ||| | | ||||||    
T  6681887 agagacaacgaaattacaaaaacaaacgaaagaatt--gaaaatatgtgaaatcacttattcaattcagataaaaggaaaaacaactcgaatgagtgatt 6681984  T
Q  112 tgtgtgtcaaaattgactccaaatcacc 139  Q
    | || | |||| ||||||| ||||||||    
T  6681985 tttgggccaaatttgactctaaatcacc 6682012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 7771831 - 7771983
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaa-tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||                |||| ||||||||||||||| ||||||    
T  7771831 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaaatatgtgaaatca----------------agaaggaaaaacaattcggaggggtga 7771914  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggttt 181  Q
    ||| || |||||||||||| | |||||||| ||| |||   ||||||||||||| ||||||| |||||||||    
T  7771915 tttttgggtcaaaattgaccctaaatcacccctctaaa---aagaagaagaaaagggtgacagctagggttt 7771983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 2555360 - 2555419
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactta 70  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  2555360 cagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaaaatgtgaaatcactta 2555419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 11734829 - 11734892
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaat 76  Q
    |||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||    
T  11734829 cagagacgacgaaatcacaaaagcaaactaaagaaa--agaaaatatgtgaaatcacttattcaat 11734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 25962033 - 25961953
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacag-aaaatatgt-gaaatcacttattcaattatgatagaatgaaaaac 94  Q
    |||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||| ||||| |||| || |||||||    
T  25962033 acgacgaaatcacaaaaacaaaggaaagaaaactgaaaaatatgtagaaatcacttatttaattaggatataaggaaaaac 25961953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 14535000 - 14534959
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaa 62  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14535000 gaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaa 14534959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 25487716 - 25487657
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||||||||    
T  25487716 agacgacgaaatcacgaaaacaaacgaaagaacaatgaaaatatgtgaaaatcacttatt 25487657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 585916 - 585867
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||||||||| || |  ||||||||||||||    
T  585916 agacgacgaaatcacaaaaacaaacgaaataagattgaaaatatgtgaaa 585867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 7150925 - 7150860
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaatta 78  Q
    ||||| |||| ||||||||||||||||| ||| || |||||||||| ||||| |||||||||||||    
T  7150925 agacgtcgaattcacaaaaacaaacgaaggaagactgaaaatatgtagaaattacttattcaatta 7150860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 23428363 - 23428226
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaag---aaaacagaaaatatgtgaaatcactt-attcaattatgat------agaatgaaaaacaattcg 100  Q
    ||||||||||||||| | ||||| |||| |||    |||||| ||||||||||||||| ||| |||||||||||||      | ||  ||||||||||||    
T  23428363 cagagacgacgaaataaaaaaaaaaaacaaaacgaaaaaacaaaaaatatgtgaaatccctttattcaattatgattaaaaaaaaaaaaaaaacaattcg 23428264  T
Q  101 gaagggtgatttgtgtgtcaaaattgactccaaatcac 138  Q
    ||||| |||||| |  |||||||||||||| |||||||    
T  23428263 gaaggttgatttttcagtcaaaattgactctaaatcac 23428226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26240692 - 26240740
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  26240692 gacgacgaaatcacaataacaaataaaagaaaactgaaaatatgtgaaa 26240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 26905651 - 26905710
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttatt 72  Q
    ||||||||| || | ||||||||||||||||| || |||||||||| |||||||||||||    
T  26905651 agacgacgagattagaaaaacaaacgaaagaagactgaaaatatgtggaaatcacttatt 26905710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 35276001 - 35276044
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat 57  Q
    ||||||| |||||||||||||||||||||||| || ||||||||    
T  35276001 agacgacaaaatcacaaaaacaaacgaaagaagactgaaaatat 35276044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 12215244 - 12215195
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaa 62  Q
    ||||||||||||||||| || |||||||||||| ||  ||||||||||||    
T  12215244 gagacgacgaaatcacataagcaaacgaaagaagactaaaaatatgtgaa 12215195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 32309271 - 32309226
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt 59  Q
    |||||||||||| ||||||||||| ||||||||||  |||||||||    
T  32309271 agacgacgaaattacaaaaacaaaagaaagaaaactaaaaatatgt 32309226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 9e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 15590089 - 15590261
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| || |||||||    
T  15590089 cagagacgacgaaatcacaaaagcaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtgat 15590188  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || |||||||||||| | |||||||| |||  |||| ||||||||||||||||| || ||||||||||||    
T  15590189 ttttgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaatggtaacgactagggtttga 15590261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 8693667 - 8693853
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatt---atgatagaatgaaaaacaattcggaagggt 107  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||| ||||||||||||||| ||||    
T  8693667 cagagacgacaaaatgacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggt 8693766  T
Q  108 gatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||||| || ||||||||||||   |||||||| ||| ||||| ||||||||||||| ||||||  |||| |||||| ||| ||||||    
T  8693767 gatttttgggtcaaaattgaccttaaatcacccctctaaaaagaagaagaagaaaagggtgacggctagagtttgagaaggagagaa 8693853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 12481381 - 12481530
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||    
T  12481381 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatt 12481480  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || |||||||||||  | |||||||| |||  | || |||||||||||    
T  12481481 tttgggtcaaaattgatcctaaatcacccctctgacaagaagaagaagaa 12481530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 21507819 - 21507965
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||| ||| |||||||     
T  21507819 agagacgacaaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatg 21507918  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaa 158  Q
    | || |||||||||||| | |||||||| ||| ||||| ||||||||    
T  21507919 tttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaa 21507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 23654361 - 23654211
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| | ||||| ||||||||| ||||| |||||||    
T  23654361 cagagacgacgaaatcacaaaaacaaacgaaataaaacaaaaaatatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgat 23654262  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | ||||||||||||  | || |||||||||||    
T  23654261 ttttgggtcaaaattgaccctaaatcacctctctgacaagaagaagaagaa 23654211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 6419868 - 6420018
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| || || |||||||    
T  6419868 cagagacgacgaaatcacaaaaacaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtgat 6419967  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||  ||||||||||| | |||||||| |||  | || |||||||||||    
T  6419968 ttttggatcaaaattgaccctaaatcacccctctgacaagaagaagaagaa 6420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 2304820 - 2305003
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| || || || ||||    
T  2304820 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttgat 2304919  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||| ||  | |||||||| ||| || || || |||||||| | | | || |||| ||||||| ||| ||||||    
T  2304920 ttttgggtcaaaatcgatcctaaatcacccctctaacaagaaaaagaagaagaagataacgactaaggtttgagaaggagagaa 2305003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 31937431 - 31937556
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  31937431 agagacgacgaaatcacaaaaacaaacgaaa-aaatcagaaaatatgtgaaatcacttattcaattaggatagaa-gaaaaacaattcggaggggtgatt 31937528  T
Q  112 tgtgtgtcaaaattgactccaaatcacc 139  Q
    | || ||||||| |||| | ||||||||    
T  31937529 tttgggtcaaaactgaccctaaatcacc 31937556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 14783181 - 14783307
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||||| | |||||    
T  14783181 cagagacgacgaaatcacaaaaagaaatgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgat 14783280  T
Q  111 ttgtgtgtcaaaattgactccaaatca 137  Q
    || || |||||||||||| | ||||||    
T  14783281 ttttgggtcaaaattgaccctaaatca 14783307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 19402818 - 19402968
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||  | |||||||    
T  19402818 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgat 19402917  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||  |||||| |||| | |||||||| |||| | ||  ||||||||||    
T  19402918 ttttggatcaaaagtgacccgaaatcacccctcagacaaagagaagaagaa 19402968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 6296259 - 6296414
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| | ||||| | ||||||||||||||||  |||    
T  6296259 cagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatga 6296358  T
Q  110 tttgtgt--gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    ||| | |  ||||||||| |||| |||||||| ||| ||||| |||||||||||||    
T  6296359 tttttttaggtcaaaattaactctaaatcacccctctaaaaagaagaagaagaaaa 6296414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 6303069 - 6303224
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| | ||||| | ||||||||||||||||  |||    
T  6303069 cagagacgacgaaatcacaaaaacaaacgaaagaaactagaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatga 6303168  T
Q  110 tttgtgt--gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    ||| | |  ||||||||| |||| |||||||| ||| ||||| |||||||||||||    
T  6303169 tttttttaggtcaaaattaactctaaatcacccctctaaaaagaagaagaagaaaa 6303224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 23638128 - 23638221
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaag 104  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| | |||||||    
T  23638128 cagagacgacgaaattacaaacacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattattgtagaaggaaaaacgactcggaag 23638221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 4921890 - 4921973
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaa 93  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  4921890 gcagagacgacaaaatcacaaaaacaaacgaaataaaactgaaaatatgtgaaatcacttattcaattaagatagaaggaaaaa 4921973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 35219920 - 35220063
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtg 115  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||  ||||||| | ||||||| | ||| ||||||||| ||    
T  35219920 acgacgaaatcacaaaa-caaacaaaagaaaacagaaaatatgtgatatcacttattcgattcggatagaa-ggaaaacaacttggaggggtgatttttg 35220017  T
Q  116 tgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
     |||||||||||| | |||||||| ||| || || |||||||||||    
T  35220018 agtcaaaattgaccctaaatcacccctccaagaagaagaagaagaa 35220063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 4393882 - 4393780
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||| | ||||||| || || ||||||    
T  4393882 gcagagaccatgaaatcacaaaaacaaacgaaagaaaaaagaaaatatgtgaaatcacttgttctattaggatagaaggtaaaacaactcagaggggtga 4393783  T
Q  110 ttt 112  Q
    |||    
T  4393782 ttt 4393780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 29927105 - 29927163
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactta 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29927105 agagacgacaaaatcacaaaaacaaacgaaagaaaacagaaaatttgtgaaatcactta 29927163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 31705276 - 31705209
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||| | |||||||||||    
T  31705276 cagagacgacgaaatcacaaaagcaaacggaagaaaatagaaaatatgtgaaattatttattcaatta 31705209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 4085062 - 4084945
Alignment:
Q  78 atgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaat-ggtgacaactag 176  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||||||||| | |||||||| |||  | || ||||| |||||| | ||||||||||||    
T  4085062 atgatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctctcagaaaaagaaaaagaaagtgggtgacaactag 4084963  T
Q  177 ggtttgaaaagaagagaa 194  Q
    ||||||| ||| ||||||    
T  4084962 ggtttgagaagcagagaa 4084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 31937563 - 31937629
Alignment:
Q  32 aacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattc 99  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||   |||||||||||    
T  31937563 aacaaacgaaa-aaaacagaaaatatgttaaatcacttattcaattaggatagatgaaaaaacaattc 31937629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 15175920 - 15175807
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa--tcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||  |||||||||||||   |||||||| |||||  ||||||||| || ||  |||||| |||||||| |||||| ||||||||    
T  15175920 agacgacgaaatcacaaa--caaacgaaagaaatttgaaaatatttgaaaaatcacttatttaagtaaaatagaaagaaaaacatttcggaggggtgatt 15175823  T
Q  112 tgtgtgtcaaaattgac 128  Q
    | || ||||||||||||    
T  15175822 t-tgggtcaaaattgac 15175807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 20028711 - 20028769
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttatt 72  Q
    ||||||||||||||||||||||||||||| || || ||||||||||| || ||||||||    
T  20028711 agacgacgaaatcacaaaaacaaacgaaataagacggaaaatatgtgtaaacacttatt 20028769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 31801243 - 31801293
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaat 64  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  31801243 agacgacgaaatcacaacaacaaacaaaagaaaactgaaaatatgtgaaat 31801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 15057774 - 15057725
Alignment:
Q  29 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  15057774 aaaaacagatgaaagaaaacagaaaatatgtgaaatcacgtattcaatta 15057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 2488250 - 2488169
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaa 91  Q
    |||||||| ||||||| |||||| ||||||||||||||  ||||||| ||| ||||||||||||| |||| ||||||| ||||    
T  2488250 gcagagacaacgaaattacaaaa-caaacgaaagaaaaatgaaaatacgtggaaatcacttattcgattaggatagaaggaaa 2488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8508251 - 8508202
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    ||||||||||||||||||||||| ||||||||||   |||||||||||||    
T  8508251 agacgacgaaatcacaaaaacaatcgaaagaaaattaaaaatatgtgaaa 8508202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 15470248 - 15470361
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa--tcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||| |||||||||||  |||||||||||||   |||||||| |||||  ||||||||| || ||  |||||| |||||||| ||| || ||||||||    
T  15470248 agacgatgaaatcacaaa--caaacgaaagaaatttgaaaatatttgaaaaatcacttatttaagtaaaatagaaagaaaaacatttcagaggggtgatt 15470345  T
Q  112 tgtgtgtcaaaattgac 128  Q
    | || ||||||||||||    
T  15470346 t-tgggtcaaaattgac 15470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 7870280 - 7870247
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaa 47  Q
    |||| |||||||||||||||||||||||||||||    
T  7870280 agacaacgaaatcacaaaaacaaacgaaagaaaa 7870247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 9044099 - 9044152
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    |||||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  9044099 cgaaatcacaaaaacaaatgaataaaaactgaaaatatgtgaaaatcacttatt 9044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 24791186 - 24791358
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| || ||||||||||||||| || ||||    
T  24791186 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgat 24791285  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || ||||||||||||   |||||||| ||| ||||| ||||||||||||| ||||||||||||| |||||    
T  24791286 ttttgggtcaaaattgaccataaatcacccctctaaaaagaagaagaagaaaagggtgacaactaggatttga 24791358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 9501701 - 9501517
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg-aaaaacaattcggaagggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| || ||||||    
T  9501701 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtga 9501602  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||| ||  ||||||||||| | |||||||| ||  ||||| ||||||||||||| | ||||  ||||||||||| ||| ||||||    
T  9501601 tttttggatcaaaattgaccctaaatcaccactttaaaaagaagaagaagaaaaggatgacggctagggtttgagaaggagagaa 9501517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 30026898 - 30027026
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||    
T  30026898 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtgat 30026997  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || ||||||| |||| | ||||||||    
T  30026998 ttttgggtcaaaaatgaccctaaatcacc 30027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 37612764 - 37612612
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||| |||||| |||||||| |||||||    
T  37612764 cagagacgacgaaatcacaaaaacaaacgaaagaaaataaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgat 37612665  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    || || |||||||||||| | |||||||| ||| ||||| |||||||| ||||    
T  37612664 ttttgggtcaaaattgaccctaaatcacccctctaaaaagaagaagaaaaaaa 37612612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 31202569 - 31202419
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| || ||||    
T  31202569 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgat 31202470  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || ||||||||||||   ||||||||  || ||||| |||||||||||    
T  31202469 ttttgggtcaaaattgaccttaaatcacccatctaaaaagaagaagaagaa 31202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 31407766 - 31407916
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||||  | ||||    
T  31407766 cagagacgacgaaatcataaaaacaaacgaaagaaaacaaaaaatatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatgat 31407865  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| ||| ||||| |||||||||||    
T  31407866 ttttgggtcaaaattgaccctaaatcacccctctaaaaataagaagaagaa 31407916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 14600719 - 14600866
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||| ||||| || ||||||     
T  14600719 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttt 14600818  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||||||||| | |||||||||||| || || || ||||||||    
T  14600819 tgggtcaaaattgaccctaaatcacctctctaacaagaaaaagaagaa 14600866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 39067710 - 39067857
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||  |||||||     
T  39067710 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttt 39067809  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||||||||||||   |||||||| |||  |||| |||||||||||    
T  39067810 tgggtcaaaattgaccttaaatcacccctcttaaaagaagaagaagaa 39067857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 10338843 - 10338957
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||     
T  10338843 agacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttt 10338942  T
Q  114 tgtgtcaaaattgac 128  Q
    || ||||||||||||    
T  10338943 tgcgtcaaaattgac 10338957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 12329738 - 12329609
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaa-cgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| || |||||    
T  12329738 cagagacgacgaaatcacaaaaacaaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgaaatggtga 12329639  T
Q  110 tttgtgtgtcaaaattgactccaaatcacc 139  Q
    ||| ||  ||||||||||||| ||||||||    
T  12329638 tttttggatcaaaattgactctaaatcacc 12329609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 41361842 - 41361726
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||    
T  41361842 agagacgaccaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatt 41361743  T
Q  112 tgtgtgtcaaaattgac 128  Q
    | || ||||||||||||    
T  41361742 tttgggtcaaaattgac 41361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 1810238 - 1810405
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| |||||| || ||||| |||||||    
T  1810238 cagatacgaggaaatcacaaaaacaaacgaaagaaatcagaaaaaatgtgaaatcacttattgaattaggatagaa-gaaaaaaaaatcggaggggtgat 1810336  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttg 182  Q
    || || |||||||||||| | |||||||| ||| |||   ||||||||||||| |||||| |||||||||||    
T  1810337 ttttgggtcaaaattgaccctaaatcacccctctaaa---aagaagaagaaaagggtgacgactagggtttg 1810405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 2234488 - 2234602
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||| | |||||||    
T  2234488 cagagacgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgat 2234587  T
Q  111 ttgtgtgtcaaaatt 125  Q
    || ||  ||||||||    
T  2234588 ttttggatcaaaatt 2234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 2025227 - 2025378
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||  ||| || ||||||||| | |||||||||||    
T  2025227 cagagacgacgaaatcacaaaaataaacgaaataaaacagaaaacatgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtgat 2025326  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaa 162  Q
    || |  ||||||||||||   |||||||| ||| || || ||||||||||||    
T  2025327 tttttggtcaaaattgaccataaatcacccctctaacaagaagaagaagaaa 2025378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 3204774 - 3204899
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||  |||||  |||||||||||||| ||||| ||    
T  3204774 cagagacgacgaaatcacataaacaaacgaaagaaaacagaaaatatgtgaaatcactcattaaattagaatagatggaaaaacaattcgg-agggtaat 3204872  T
Q  111 ttgtgtgtcaaaattgactccaaatca 137  Q
    || || |||||||||||||| ||||||    
T  3204873 ttttgggtcaaaattgactctaaatca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 31308258 - 31308168
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  31308258 agagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgga 31308168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 11161991 - 11161843
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||| || ||||||||| | | | |||||||||    
T  11161991 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaagatgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtgattt 11161892  T
Q  113 gtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
     || |||||||||||| | |||| ||| ||| || || |||||||||||    
T  11161891 ttgggtcaaaattgaccctaaattacccctctaacaagaagaagaagaa 11161843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 37128505 - 37128600
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggt 107  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  37128505 agagacgacgaaattacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 7579873 - 7579945
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgata 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7579873 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagata 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 13570753 - 13570872
Alignment:
Q  20 cgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtc 119  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |  |||||| |   ||    
T  13570753 cgaaatcacaaaaacaaacgaaaaaaaatagaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatc 13570852  T
Q  120 aaaattgactccaaatcacc 139  Q
    ||||||||||| ||||||||    
T  13570853 aaaattgactctaaatcacc 13570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 23971114 - 23971262
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||| ||||| | |||||    
T  23971114 cagagacgacaaaatcacaaa--caaacgaaagaaaacataaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtgat 23971211  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |  ||||||||| |||  |||||||||||| || || || ||||||||    
T  23971212 tttttggtcaaaatttactttaaatcacctctctaacaagaaaaagaagaa 23971262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 10148057 - 10147907
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa-tgaaaaacaattcggaagggtgat 110  Q
    |||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||   |||||||| ||||| |||||||    
T  10148057 agagacgacataatctcaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgat 10147958  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    |  || |||||||||||| | |||||||| ||| || |  |||||||||||    
T  10147957 tattgggtcaaaattgaccctaaatcacccctctaacatgaagaagaagaa 10147907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 1039912 - 1040062
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||  |||||| ||||| ||||||||| |||||||    
T  1039912 cagagacgacaaaatcacaaaa-caaatgaaagaaagcagaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtgat 1040010  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    || ||  |||||||||||   |||||| | ||| ||||| |||||||||||||    
T  1040011 ttttggatcaaaattgaccttaaatcatc-ctctaaaaagaagaagaagaaaa 1040062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 15288823 - 15288926
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||||||||||||| | || |||||| || |    
T  15288823 gacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgatttttgag 15288922  T
Q  118 tcaa 121  Q
    ||||    
T  15288923 tcaa 15288926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 15469192 - 15469295
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||||||||||||| | || |||||| || |    
T  15469192 gacgaaatcacaaaaacaaacgaaagaaaacagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgatttttgag 15469291  T
Q  118 tcaa 121  Q
    ||||    
T  15469292 tcaa 15469295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 24699943 - 24699813
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgataga--atgaaaaacaattcggaagggtg 108  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||| |  |  |||||||  ||||| |||||    
T  24699943 cagagacgacgaaattacaaaagcaaatgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatataagaaaaaaaacatctcggatgggtg 24699844  T
Q  109 atttgtgtgtcaaaattgactccaaatcacc 139  Q
    |||| || |||||||||||| | ||||||||    
T  24699843 atttttgggtcaaaattgaccctaaatcacc 24699813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 4757276 - 4757191
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  4757276 cagagacgacgaaatcttaaaaagaaatgaaagaaaacagaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaa 4757191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 22787603 - 22787528
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 86  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  22787603 cagaaacgacggaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcacttattcaactaggatagaa 22787528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 32778973 - 32779069
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||| |||||||||| || ||||||||| ||| | ||||||||    
T  32778973 acgacgaaatcacaaaaataaacgaaagaaaactgaaaatatgtggaaatctcttatttaattatgatataaggaaaaacaactcgaaggggtgatt 32779069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 2968644 - 2968551
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcgga 102  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||  ||| || ||||||||| |||||    
T  2968644 gcagagacgacaaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattagaatataaagaaaaacaactcgga 2968551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 30039354 - 30039466
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    |||||||||||||||||||||||||||||||||||      ||||||||| |||||||| ||||||||||  | |||| ||||||||||||||| | |||    
T  30039354 gcagagacgacgaaatcacaaaaacaaacgaaaga------aaaatatgtggaaatcacatattcaattagaaaagaaggaaaaacaattcggatgagtg 30039447  T
Q  109 atttgtgtgtcaaaattgac 128  Q
    |||| || ||||||||||||    
T  30039448 attt-tgggtcaaaattgac 30039466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 28297124 - 28297227
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacag--aaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    ||||||||||||||||||||||||| |||||||||||  |  || |||| |||||||||| |||||||||  | |||| ||||||||| |||||  ||||    
T  28297124 cagagacgacgaaatcacaaaaacagacgaaagaaaatggtaaatatatatgaaatcactaattcaattagaaaagaaggaaaaacaactcggagcggtg 28297223  T
Q  109 attt 112  Q
    ||||    
T  28297224 attt 28297227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 7281756 - 7281655
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaac--agaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||| ||||||||||||||||||||||||| |   | ||||||| || ||||||||||||||| ||  | |||| ||||||||||||||| |||||||    
T  7281756 agacgatgaaatcacaaaaacaaacgaaagaacaataaaaaaatatatggaaatcacttattcaactagaaaagaaagaaaaacaattcggatgggtgat 7281657  T
Q  111 tt 112  Q
    ||    
T  7281656 tt 7281655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 10334279 - 10334153
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaa-tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgt 116  Q
    ||||||||||| ||||||||| ||||||||  ||||| ||| |||| ||||||||| ||||| ||||||| ||||||||| ||  | | ||||||| ||     
T  10334279 gacgaaatcactaaaacaaacaaaagaaaattgaaaaatatatgaactcacttatttaattaggatagaaggaaaaacaactcatatgagtgatttttgg 10334180  T
Q  117 gtcaaaattgactccaaatcacctctc 143  Q
     ||||||||||| | |||||| |||||    
T  10334179 atcaaaattgaccctaaatcatctctc 10334153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 13576207 - 13576254
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg 60  Q
    |||||||| ||||||| |||| |||||||||||||| |||||||||||    
T  13576207 gagacgacaaaatcaccaaaataaacgaaagaaaactgaaaatatgtg 13576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 42261043 - 42260984
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    |||||| |||||||| ||||||||||||||||||   |||||||||| ||||||||||||    
T  42261043 agacgatgaaatcaccaaaacaaacgaaagaaaatcaaaaatatgtgaaaatcacttatt 42260984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 22757202 - 22757022
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||     
T  22757202 agacgacgaaatcacaaaaacaaacgaaaaaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttt 22757103  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || |||||||||||| | |||||||| |||  |||| ||||||||||||| ||||||  ||||||||||| ||| ||||||    
T  22757102 tgagtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaaaagggtgacggctagggtttgagaaggagagaa 22757022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 43244391 - 43244563
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||| || |||||||    
T  43244391 cagagacgacaaaatcacaaaaacaaacgaaagaaaatcgaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgat 43244490  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || |||||||||||| | |||||||| ||| ||||| ||||||||||||| | ||||  |||||||||||    
T  43244491 ttttgggtcaaaattgaccctaaatcacccctctaaaaaaaagaagaagaaaaggatgacggctagggtttga 43244563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 20399913 - 20400099
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||| ||||||||  |||||||    
T  20399913 cagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgat 20400012  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaag---aaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | ||||| ||  || ||||| |||||||||   |||| ||||||||||||||||||| ||| ||||||    
T  20400013 ttttgggtcaaaattgaccctaaatcgcccttctaaaaagaagaagaagaaaaaaaaggtgacaactagggtttgagaaggagagaa 20400099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 394284 - 394450
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  394284 cagagacgacgaaatcatagaaacaaacgaaagaaagcagaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgat 394383  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || || |||||||||||| | |||||||| |||      ||| |||||||||| |||||||||||||||||||    
T  394384 ttttgggtcaaaattgaccctaaatcacccctc------caaaaagaagaaaagggtgacaactagggtttga 394450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 7083826 - 7083997
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  | |||||||    
T  7083826 cagagacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtgat 7083925  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || ||  ||||||||||| | |||| | |  ||  |||| ||||||||| ||| |||||| ||||||||||||    
T  7083926 ttttggatcaaaattgaccctaaattatccatctgaaaagaagaagaag-aaagggtgacgactagggtttga 7083997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 25658278 - 25658092
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||| |||  ||||||    
T  25658278 cagagacgacgaaatcacaaaaacatacgaaagaaaacagaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgat 25658179  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaaga---agaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || ||||||||| || | |||||||| ||| ||||| |||||||   |||||| ||||||  ||||||||||| ||| ||||||    
T  25658178 ttttgagtcaaaattaaccctaaatcacccctctaaaaagaagaagaagaagaaaagggtgacggctagggtttgagaaggagagaa 25658092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 26742476 - 26742623
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||     
T  26742476 agacgacaaaatcacgaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttt 26742575  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||||||||  | ||||||||  || ||||| ||||| |||||    
T  26742576 tgggtcaaaattgatcctaaatcacccatctaaaaagaagaaaaagaa 26742623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 6911790 - 6911640
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||  |||||||    
T  6911790 agagacgaagaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatt 6911691  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaa 162  Q
    | ||  ||||||||||| | |||||||| ||| || || ||||||||||||    
T  6911690 tttggatcaaaattgaccctaaatcacccctctaacaagaagaagaagaaa 6911640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 7060432 - 7060318
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||     
T  7060432 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttt 7060333  T
Q  114 tgtgtcaaaattgac 128  Q
    || || |||||||||    
T  7060332 tgggttaaaattgac 7060318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 13965671 - 13965545
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||    
T  13965671 cagagacgacgaaatcacaaaaacaaacgaaagaaaacatagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgat 13965572  T
Q  111 ttgtgtgtcaaaattgactccaaatca 137  Q
    || || |||||||||||| | ||||||    
T  13965571 ttttgggtcaaaattgaccctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 24568723 - 24568873
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  24568723 cagatacgacgaaatcacaaaaacaaacgaaataaaacagataatatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtgat 24568822  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || ||||||||| || | |||||||| |||  |||| |||||||||||    
T  24568823 ttttgggtcaaaattcaccctaaatcacccctctgaaaagaagaagaagaa 24568873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 29268787 - 29268904
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||| |||||||    
T  29268787 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtgat 29268886  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    ||  | ||||||||||||    
T  29268887 tttagggtcaaaattgac 29268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 39837699 - 39837522
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa-tgaaaaacaattcggaagggtgatttgtgt 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||| || ||| | ||||||||| ||     
T  39837699 gacgaaatcaaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgg 39837600  T
Q  117 gtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    |||||||||||| | |||||||| |||  |||| ||||||||||||| |||||| ||||| |||||| ||| ||||||    
T  39837599 gtcaaaattgacgctaaatcacccctctgaaaagaagaagaagaaaagggtgacgactagtgtttgagaaggagagaa 39837522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 24825757 - 24825610
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| | |||||||     
T  24825757 agacgacgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttt 24825658  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    |  |||||||||||  | |||||||| ||| || || |||||||||||    
T  24825657 taggtcaaaattgatcctaaatcacccctctaacaagaagaagaagaa 24825610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 26674483 - 26674309
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||    
T  26674483 cagagatgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggaggggtgat 26674384  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc--tctcaaaa-aacaagaagaagaaaatggtgacaactagggtttg 182  Q
    || |  |||||||||||  | ||||||||  ||| |||| || ||||||||||||  ||||||| |||| |||||    
T  26674383 ttttaggtcaaaattgatcctaaatcacccatctgaaaagaagaagaagaagaaaggggtgacatctagagtttg 26674309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8712641 - 8712491
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || ||||||| |||||||||||  || |||||||    
T  8712641 cagagatgacgaaatcacaaaaacaaacgaaagaaaacaaaaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtgat 8712542  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| ||  ||||| |||||||||||    
T  8712541 ttttgggtcaaaattgaccctaaatcacccctgtaaaaagaagaagaagaa 8712491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 11210323 - 11210473
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | | |||||| |||||||| |||||||    
T  11210323 cagagacgacgaaatcacaaaaacaaacgaaagaaaagagtaaatatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgat 11210422  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |  | |||||||||| | |||||||| ||| | ||| |||||||||||    
T  11210423 ttttagggcaaaattgaccctaaatcacccctctacaaagaagaagaagaa 11210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 27394941 - 27394791
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||| ||||||| |||||| ||| ||||||||||||    
T  27394941 cagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatattttaaattacttattcaattaggatagaaggaaaaataatccggaagggtgat 27394842  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| ||   |||| |||||||||||    
T  27394841 ttttgggtcaaaattgaccctaaatcacccctgtgaaaagaagaagaagaa 27394791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 44757051 - 44757169
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||| | ||||||    
T  44757051 gcagagacgacgaaatcataaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtga 44757150  T
Q  110 tttgtgtgtcaaaattgac 128  Q
    ||| || ||||||||||||    
T  44757151 tttttgggtcaaaattgac 44757169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 30202149 - 30201999
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| | | | |||||||    
T  30202149 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaagataaaaggaaaaacaactagaaggggtgat 30202050  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||  |||||||||||   |||||||| |||  | || |||||||||||    
T  30202049 ttttggatcaaaattgaccttaaatcacccctctgacaagaagaagaagaa 30201999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 29922948 - 29922761
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaa---caattcggaagggt 107  Q
    |||||||||| |||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||   ||| | ||| ||||    
T  29922948 cagagacgacaaaatcacaaaaacagacgaaaggaaatagaaaatatgtgaaatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggt 29922849  T
Q  108 gatttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 195  Q
    ||||  |  |||||||||||| | ||||||||||||  | || ||||||||||||  ||||||  ||||||||||| |||||||||||    
T  29922848 gattattaggtcaaaattgaccctaaatcacctctctgacaagaagaagaagaaaggggtgacggctagggtttgagaagaagagaaa 29922761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 38944158 - 38944274
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||| ||| |||||||    
T  38944158 cagagacgacgaaatcacaaaaacaaacgaaagaaaaca-aaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggaggggtgat 38944256  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || | ||||||||||    
T  38944257 ttttgggccaaaattgac 38944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 24100249 - 24100099
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacaga--aaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||    
T  24100249 agacgacgaaattgcaaaaacaaacgaaagaaaacagagaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatt 24100150  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctc-aaaaaacaagaagaagaa 161  Q
    | ||  ||||||||||  | |||||||| ||| |||||| |||||||||||    
T  24100149 tttggttcaaaattgatcctaaatcacccctctaaaaaaaaagaagaagaa 24100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 12717129 - 12717281
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||  |||||||| ||||| || |||||    
T  12717129 gagacgaagaaatcacaaaaacaaacgaaagaaaactgaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaagtcggacggatgatt 12717228  T
Q  112 tgtgtgtcaaaattgactccaaatcacctc--tcaaaaaacaagaagaagaaaa 163  Q
    | || |||||||||||||| ||||||||||  |||| | |||||||||||||||    
T  12717229 t-tgggtcaaaattgactctaaatcacctctttcaatagacaagaagaagaaaa 12717281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 478030 - 478201
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgt 118  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||| |||| || |||||||||||||| | |||||||| || ||    
T  478030 acgaaatcacaaaaataaacgaaaggaaacagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgg-atggtgatttttgggt 478128  T
Q  119 caaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    ||||||||||   |||||||| ||| |||   ||||||||||||  ||||||  ||||||||||| ||| ||||||    
T  478129 caaaattgaccataaatcacccctctaaa---aagaagaagaaaggggtgacggctagggtttgagaaggagagaa 478201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 5814459 - 5814310
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| ||||||| | ||||||| | ||| || |||    
T  5814459 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaataacttattcaattaagatagaagggaaaacaacttggagggatga 5814360  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaag 159  Q
    ||| ||  ||||||||||| | |||||||||| | || || |||||||||    
T  5814359 tttttggatcaaaattgaccctaaatcacctccctaacaagaagaagaag 5814310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 6882067 - 6881966
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| || ||| | |||||||    
T  6882067 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataactcgaaggggtgat 6881968  T
Q  111 tt 112  Q
    ||    
T  6881967 tt 6881966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 43493297 - 43493394
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  43493297 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 51152235 - 51152119
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  51152235 cagagatgacgaaatcacaaaa-caaacgaaagaaagcagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtgat 51152137  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||| ||||||    
T  51152136 ttttgggtcaatattgac 51152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 7861216 - 7861343
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||| ||  ||||||    
T  7861216 cagagacgacgaaatcacaaaaacaaatgaaa-aaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataattcagagtggtgat 7861314  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || ||||||||||| || ||||||||    
T  7861315 ttttgggtcaaaattgattctaaatcacc 7861343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 31522074 - 31521910
Alignment:
Q  30 aaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgact 129  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |  ||||||||||||     
T  31522074 aaaacaaactaaagaaaacaaagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgacc 31521975  T
Q  130 ccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    | |||||||| ||   |||| ||||| ||||||| ||  || |||||||||||| ||| ||||||    
T  31521974 ctaaatcacccctttgaaaagaagaacaagaaaagggccacgactagggtttgagaaggagagaa 31521910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 626566 - 626671
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||||| || |    
T  626566 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aatcacttattcaattatgatagaa-gaaaaataattcagatgggtgatttttggg 626663  T
Q  118 tcaaaatt 125  Q
    ||||||||    
T  626664 tcaaaatt 626671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 50801328 - 50801237
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcgga 102  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||    
T  50801328 cagagacgacgaaatcacaaaaataaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga 50801237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 20887766 - 20887882
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||  || || |||||||| |||||||    
T  20887766 cagagacgacgaaatcacaaaaacaaacgaaagaaagcagaaaa-atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgat 20887864  T
Q  111 ttgtgtgtcaaaattgac 128  Q
    || || ||||||||||||    
T  20887865 ttttgggtcaaaattgac 20887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 45351080 - 45351199
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattc-aattatgatagaatg-aaaaacaattcggaagggtg 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||| || | |||||||||||||| |||||    
T  45351080 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtg 45351179  T
Q  109 atttgtgtgtcaaaattgac 128  Q
    |||| ||  |||||||||||    
T  45351180 atttttggatcaaaattgac 45351199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 45360559 - 45360678
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattc-aattatgatagaatg-aaaaacaattcggaagggtg 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||| || | |||||||||||||| |||||    
T  45360559 cagagacgacgaaatcacaaaaacaaacgaaacaaaacagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtg 45360658  T
Q  109 atttgtgtgtcaaaattgac 128  Q
    |||| ||  |||||||||||    
T  45360659 atttttggatcaaaattgac 45360678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 19745501 - 19745384
Alignment:
Q  11 cagagacgacgaaatcacaaaaa-caaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||  |||||||||||||| |  |||    
T  19745501 cagagacgactaaatcacaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatga 19745402  T
Q  110 tttgtgtgtcaaaattga 127  Q
    ||| || |||||||||||    
T  19745401 tttttgggtcaaaattga 19745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 19794305 - 19794422
Alignment:
Q  11 cagagacgacgaaatcacaaaa-acaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||  |||||||||||||| |  |||    
T  19794305 cagagacgactaaatcacaaaaaacaaacgaaagaaaacagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatga 19794404  T
Q  110 tttgtgtgtcaaaattga 127  Q
    ||| || |||||||||||    
T  19794405 tttttgggtcaaaattga 19794422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 39523520 - 39523433
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaatt 98  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||||||||||    
T  39523520 cagagatgacgaaatcataaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 22049413 - 22049542
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    |||||||| |||||| || ||||| ||| |||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  22049413 gcagagacaacgaaaccataaaaataaatgaaagaaaactgaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaattcgaaagggtg 22049512  T
Q  109 atttgtgtgtcaaaattgactccaaatcacc 139  Q
    |||| || ||||||||| || | ||||||||    
T  22049513 attt-tgggtcaaaattaaccctaaatcacc 22049542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8517466 - 8517533
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8517466 cagagacggcgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtaaaatcacttattcaatta 8517533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 36124359 - 36124471
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||| ||||| | ||||||||||| ||| | |||||    
T  36124359 cagagacgacgaaatcacaaaaacaaacgaaagaaaac--aaaatatgtgaaatcaatcattcaattaagataggaggaaaaacaattgggatgagtgat 36124456  T
Q  111 ttgtgtgtcaaaatt 125  Q
    || ||  ||||||||    
T  36124457 ttttggatcaaaatt 36124471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 13586250 - 13586343
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaa-cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaa 103  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  13586250 cagagatgacgaaatcacaaaaacaaacgaaaaaaaaacagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatttggaa 13586343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 24611809 - 24611884
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaa 86  Q
    |||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  24611809 cagagacgtcgaaatcacaaaagcaaacgaaaaaaaatagaaaatatgtgaaatcacttattcaattaggatagaa 24611884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 2447908 - 2447810
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||| |||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||| |||||||  ||||| |||||| | |||||||||    
T  2447908 agacgaagaaatcacaaaaacaaactaatgaaaacataaattatgtgaaatcacttattcaattaggatagaaaaaaaaataattcgaaggggtgattt 2447810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 42197665 - 42197536
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacg--aaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    ||||||||||||||||||||||||||| |  ||| |||||| |||||| ||||| ||||||||| ||||| ||||||| |||||| |||||||||  |||    
T  42197665 cagagacgacgaaatcacaaaaacaaatgaaaaaaaaaacaaaaaatacgtgaagtcacttattaaattaggatagaaggaaaaataattcggaa-agtg 42197567  T
Q  109 atttgtgtgtcaaaattgactccaaatcacc 139  Q
    |||| | |||||||||| || | ||||||||    
T  42197566 atttttttgtcaaaattaaccctaaatcacc 42197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 3159136 - 3159052
Alignment:
Q  29 aaaaacaaacgaaagaaaacagaaaatatgtgaaa-tcacttattcaattatgatagaatgaaaaacaattcggaagggtgattt 112  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||  |||||||    
T  3159136 aaaaacaaacgaaagaaagctgaaaatatgtgaaaatcacttatttaattatgatagaaggaaaaacaactcggaatagtgattt 3159052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 28837177 - 28837128
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28837177 gcagagacgacgaaatcacaaaaacaaacgaaaaaaaacagaaaatatgt 28837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 32616836 - 32616895
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttat 71  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  32616836 agagatgacgaaatcacaaaaataaacgaaataaaacagaaaatatgtgaaatctcttat 32616895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 7084276 - 7084167
Alignment:
Q  52 aaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgactccaaatcacctctcaaaaaaca 151  Q
    ||||||||| ||||||||||||||||| | ||||| ||||||||| |||||||  | |||| || |||||||||||  | |||||||| |||  | ||||    
T  7084276 aaatatgtgcaatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctctgacaaca 7084177  T
Q  152 agaagaagaa 161  Q
    ||||||||||    
T  7084176 agaagaagaa 7084167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 27090836 - 27090755
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaa 91  Q
    |||||||| ||||||| |||||| ||||||||||||||  ||||||| ||| ||||||||||||| |||| ||||||| ||||    
T  27090836 gcagagacaacgaaattacaaaa-caaacgaaagaaaaatgaaaatacgtggaaatcacttattcgattaggatagaaggaaa 27090755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 1551608 - 1551568
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaa 62  Q
    |||||||||||||||| ||||||| || |||||||||||||    
T  1551608 aaatcacaaaaacaaatgaaagaataccgaaaatatgtgaa 1551568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 22621541 - 22621513
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaa 42  Q
    |||||||||||||||||||||||||||||    
T  22621541 agacgacgaaatcacaaaaacaaacgaaa 22621513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6248 - 6098
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  6248 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgat 6149  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  | || |||||||||||    
T  6148 ttttgggtcaaaattgaccctaaatcacccctctgacaagaagaagaagaa 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 424301 - 424451
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  424301 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgat 424400  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  | || |||||||||||    
T  424401 ttttgggtcaaaattgaccctaaatcacccctctgacaagaagaagaagaa 424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 28678145 - 28678290
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtg 115  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||    
T  28678145 acgacgaaatcacaaaaacaaacgaaagaaaatataaaatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttg 28678244  T
Q  116 tgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
     |||||||||||| | |||||||| ||| ||||| |||||||||||    
T  28678245 ggtcaaaattgaccctaaatcacccctctaaaaagaagaagaagaa 28678290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 4882370 - 4882519
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  4882370 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatt 4882469  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    | || ||| |||||||||| ||||| ||  ||  |||| |||||||||||    
T  4882470 tttgggtcgaaattgactctaaatcgcccatctgaaaagaagaagaagaa 4882519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 29205396 - 29205210
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  | |||||||    
T  29205396 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtgat 29205297  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaa---gaagaaaatggtgacaactagggtttgaaaagaagagaa 194  Q
    || || |||||||||||| | ||||||||  || ||||| |||||   |||||||| || |||  ||||||||||| ||| ||||||    
T  29205296 ttttgggtcaaaattgaccctaaatcacccgtctaaaaagaagaagacgaagaaaagggcgacggctagggtttgagaaggagagaa 29205210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 32784219 - 32784091
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||||||    
T  32784219 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaatatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtgat 32784120  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || || |||||||||||| | ||||||||    
T  32784119 ttttgggtcaaaattgaccctaaatcacc 32784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 42491004 - 42490854
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  42491004 cagagacgacgaaatcacaaaaacaaacgaaagaaaactgaagatatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtgat 42490905  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |  |||||| ||||| | ||||||||||||  | || |||||||||||    
T  42490904 ttttaggtcaaacttgaccctaaatcacctctctgacaagaagaagaagaa 42490854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 33487043 - 33487190
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||     
T  33487043 agacgacgaaatcacaaaaacaaacgaaagaaagcataaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttt 33487142  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |||||||||||| | |||||||| |||  |||| |||||||||||    
T  33487143 tgggtcaaaattgaccctaaatcacccctctgaaaagaagaagaagaa 33487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 3232899 - 3232749
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||||||    
T  3232899 cagaaacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtgat 3232800  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || |   ||||||||||| | ||||||||  ||  |||| |||||||||||    
T  3232799 tttttgatcaaaattgaccctaaatcacccatctgaaaagaagaagaagaa 3232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 27534810 - 27534660
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||| || ||||    
T  27534810 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgat 27534711  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||| | |||  | || |||||||||||    
T  27534710 ttttgggtcaaaattgaccctaaatcatccctctgacaagaagaagaagaa 27534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 12871729 - 12871604
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||| ||||| |||||||||     
T  12871729 agacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttt 12871630  T
Q  114 tgtgtcaaaattgactccaaatcacc 139  Q
    || |||||||||||| | ||||||||    
T  12871629 tgggtcaaaattgaccctaaatcacc 12871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 44517258 - 44517157
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  44517258 cagagacgacgaaatcacaaaaacaaacgaaagaaagcagaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtgat 44517159  T
Q  111 tt 112  Q
    ||    
T  44517158 tt 44517157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 37822355 - 37822471
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||    
T  37822355 cagagacgacgaaatcacaaaaacaaatgaaagaaaatagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggtaat 37822454  T
Q  111 ttgtgtgtcaaaattga 127  Q
    || || |||||||||||    
T  37822455 ttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 7995570 - 7995721
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  ||||||    
T  7995570 cagagacgacgatatcacaaaaaaaaaaggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgat 7995669  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctc-aaaaaacaagaagaagaa 161  Q
    || || |||||||||||| | |||||||| |||  ||||| |||||||||||    
T  7995670 ttttgggtcaaaattgaccctaaatcacccctctgaaaaagaagaagaagaa 7995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 20411683 - 20411532
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||| || ||||||||||||||| ||||||||    
T  20411683 agagacgatgaaatcccaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatt 20411584  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaa 163  Q
    | || ||||||||||||   ||||||||  || ||||| |||||||||||||    
T  20411583 tttgggtcaaaattgaccataaatcacccatctaaaaagaagaagaagaaaa 20411532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 14265395 - 14265267
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||  ||||| |||||||    
T  14265395 cagagacgacgaaatcacaaaaacatacgtaagaaaacagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgat 14265296  T
Q  111 ttgtgtgtcaaaattgactccaaatcacc 139  Q
    || | ||||||||||||| | ||||||||    
T  14265295 ttttttgtcaaaattgaccctaaatcacc 14265267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 42276466 - 42276299
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    ||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||  |||||||||||||| |||||||    
T  42276466 cagagacgacgtaatcacaaat-caaacgaaagaaaactgaaaatatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtgat 42276368  T
Q  111 ttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    || |||||||||| | || | |||||||| |||  ||   ||||||||||||| |||||| ||||||||||||    
T  42276367 tt-tgtgtcaaaaataaccctaaatcacccctctgaa---aagaagaagaaaagggtgacgactagggtttga 42276299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 10627111 - 10627010
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||| ||||| || ||||    
T  10627111 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaattacttattcaattaggatataaagaaaaacaactcggagggatgat 10627012  T
Q  111 tt 112  Q
    ||    
T  10627011 tt 10627010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 13488546 - 13488699
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgat 110  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | | ||| ||||||||| ||||| |||||||    
T  13488546 cagagacggcgaaatcacaaaaacaaacgaaagaaaatagaaaatatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgat 13488645  T
Q  111 ttgtgtgtcaaaattgactccaaatca-cctctca-aaaaacaagaagaagaaa 162  Q
    || || |||||||| ||| | |||||| ||||| | || |||||||||||||||    
T  13488646 ttttgggtcaaaatcgaccctaaatcaccctctgacaacaacaagaagaagaaa 13488699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 17347709 - 17347584
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||  |||||||| ||||| ||||||    
T  17347709 gcagagacgacgaaatcacaaaaacaaa-gaaagaaaacagaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtga 17347611  T
Q  110 tttgtgtgtcaaaattgactccaaatca 137  Q
    ||| || |||||||||||| | ||||||    
T  17347610 tttttg-gtcaaaattgaccctaaatca 17347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 18343717 - 18343575
Alignment:
Q  19 acgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||| ||||||||| ||| | ||||||||| || ||    
T  18343717 acgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggt 18343618  T
Q  119 caaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    |||||||||  | |||||||| |||  | ||||| ||||||||    
T  18343617 caaaattgatcctaaatcacccctctgacaacaacaagaagaa 18343575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 29726608 - 29726690
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaaca 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||||||    
T  29726608 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcgattaggatataaggaaaaaca 29726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 51418124 - 51418040
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  51418124 cagagacgacgaaattacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactt-ttcaattaggatagaaggaaaaacaa 51418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 4871046 - 4871186
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtca 120  Q
    ||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||  ||| || |||||||||||||||  |||||||| || ||||    
T  4871046 gaaatcacaaaaacaaacggaaaaaaatagaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtca 4871145  T
Q  121 aaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    |||||||    ||||||||  |||||||| |||||||||||    
T  4871146 aaattgatcttaaatcacccgtcaaaaaagaagaagaagaa 4871186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 15391262 - 15391329
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaatta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15391262 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaacatgtgaaatcacttattcaatta 15391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 45750586 - 45750439
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| |||| || ||||||  | |||||  | ||||||     
T  45750586 agacgacgaaatcacaaaaacaaacgaaagaaaaccaaaaatatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttt 45750487  T
Q  114 tgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaa 161  Q
    || ||||||||||||   |||||||| |||  |||| |||||||||||    
T  45750486 tgggtcaaaattgaccttaaatcacccctctgaaaagaagaagaagaa 45750439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 45193639 - 45193718
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaa 93  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  45193639 agacgacaaaatcacaaaaacaaacgaaaggaaacggaaaatatgtgaaatcacttattcaattaggatagaaggaaaaa 45193718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 15791285 - 15791344
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcactta 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15791285 cagagacgatgaaatcacaaaaacaaacgaaagaaaacagaaaatatgttaaatcactta 15791344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 28399336 - 28399414
Alignment:
Q  16 acgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaa 93  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||| || ||||||    
T  28399336 acgacgaaatcacaaaaacaaacgaaagaaaactaaaaatatgtgaaaatcacttatttaattatgatataaggaaaaa 28399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 33125814 - 33125946
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    |||||||| |||||||||||||||||||  |||||| ||  ||| |||||| ||||||||||||||||||| | |||| |||||||||||  || | |||    
T  33125814 gcagagacaacgaaatcacaaaaacaaagaaaagaatactaaaattatgtggaaatcacttattcaattataaaagaaggaaaaacaatttagatgagtg 33125913  T
Q  109 atttgtgtgtcaaaattgactccaaatcacctct 142  Q
    |||| || |||||||||||| | |||||||||||    
T  33125914 attt-tgggtcaaaattgaccctaaatcacctct 33125946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 33939023 - 33939180
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaa--tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtg 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||             |||||| |||||||||||| || |||||    
T  33939023 cagagatgacgaaatcacaaaaacaaacgaaagaaaacagaaaatttatgtgaaatcac-------------atagaaagaaaaacaattcagaggggtg 33939109  T
Q  109 atttgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggt 179  Q
    |||| || |||||||||||| | |||||||| ||| ||||| ||| | || |||  |||||||| ||||||    
T  33939110 atttttgggtcaaaattgaccctaaatcacccctctaaaaagaaggaaaaaaaaggggtgacaattagggt 33939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 9298434 - 9298551
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtc 119  Q
    ||||||||||||||||||||||||||||  |||||| || ||||||| ||||| || || ||||||| ||||||||| |||| ||||||| || ||  ||    
T  9298434 gaaatcacaaaaacaaacgaaagaaaacttaaaatacgtggaaatcaattatttaactaggatagaaggaaaaacaactcgg-agggtgactt-tggttc 9298531  T
Q  120 aaaattgactccaaatcacc 139  Q
    ||||||||| | ||||||||    
T  9298532 aaaattgaccctaaatcacc 9298551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 32878798 - 32878691
Alignment:
Q  29 aaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattgac 128  Q
    |||||||||||||||||||  | |||||||||||| |||||||| ||||| ||||||  ||||||||| |||||||| |||||| || ||||||||| ||    
T  32878798 aaaaacaaacgaaagaaaattg-aaatatgtgaaa-cacttatttaattaggatagagggaaaaacaactcggaaggatgattt-tgggtcaaaattaac 32878702  T
Q  129 tccaaatcacc 139  Q
     | ||||||||    
T  32878701 cctaaatcacc 32878691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 38783175 - 38783090
Alignment:
Q  15 gacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatg-tgaaatcacttattcaattatgatagaatgaaaaacaattc 99  Q
    |||||||||||||||||||| |||||| |||||| ||||||||| | |||||||||||| || ||  | |||| ||||||||||||    
T  38783175 gacgacgaaatcacaaaaacgaacgaaggaaaactgaaaatatgttaaaatcacttatttaactaaaagagaaagaaaaacaattc 38783090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 50107926 - 50107967
Alignment:
Q  13 gagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaa 54  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  50107926 gagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaa 50107967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30678359 - 30678315
Alignment:
Q  18 gacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaa 63  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  30678359 gacgaaatcacaaaa-caaacgaaagaaaactgaaaatatgtgaaa 30678315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 15791554 - 15791614
Alignment:
Q  67 cttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaaaattga 127  Q
    |||||||||||| |||| || ||||||||| ||||| | ||||||| ||||||||||||||    
T  15791554 cttattcaattaagatataaggaaaaacaactcggatgagtgatttttgtgtcaaaattga 15791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 47551209 - 47551177
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaa 42  Q
    |||||||||||||||||||||||||||||||||    
T  47551209 gcagagacgacgaaatcacaaaaacaaacgaaa 47551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 32301447 - 32301388
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtg-aaatcacttatt 72  Q
    |||||| ||||||||||||||||||||||||| ||  || ||||||| ||||||||||||    
T  32301447 agacgatgaaatcacaaaaacaaacgaaagaatactaaagatatgtgaaaatcacttatt 32301388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 45425485 - 45425544
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgt-gaaatcacttatt 72  Q
    ||||||||||||||||||||| ||||||||||||  ||||||| || || ||||||||||    
T  45425485 agacgacgaaatcacaaaaactaacgaaagaaaattgaaaatacgtggatatcacttatt 45425544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 3010 - 2830
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatg--aaaaacaattcggaagggtgatt 111  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |  |||||||| ||||| ||||||||    
T  3010 agacgacaaaatcacaaaaacaaacgaaaggaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgatt 2911  T
Q  112 tgtgtgtcaaaattgactccaaatcacctctcaaaaaacaagaagaagaaaatggtgacaactagggtttgaaaagaagagaaa 195  Q
      || |||||||||||| | |||||||| |||    |||||||||||||||  |||||| |||||||||||| |||||||||||    
T  2910 attgggtcaaaattgaccctaaatcacccctc---taacaagaagaagaaaggggtgacgactagggtttgagaagaagagaaa 2830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 74264 - 74148
Alignment:
Q  22 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtcaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || |||||    
T  74264 aaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaa 74165  T
Q  122 aattgactccaaatcac 138  Q
    |||||| || |||||||    
T  74164 aattgattctaaatcac 74148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 1095 - 1213
Alignment:
Q  10 gcagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||| | ||||||    
T  1095 gcagagacgacgaaatcacaaaaacaaacgaaagaaaactgaaaatatgtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtga 1194  T
Q  110 tttgtgtgtcaaaattgac 128  Q
    ||| || ||||||||||||    
T  1195 tttttgggtcaaaattgac 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 86 - 1
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaa 96  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  86 cagagacgacgaaatcacaaaaataaacaaaagaaaacaaaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 7137 - 7245
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||     
T  7137 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttt 7236  T
Q  114 tgtgtcaaa 122  Q
    || ||||||    
T  7237 tgggtcaaa 7245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 404269 - 404385
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatt 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||| ||||||| ||||||||    
T  404269 agagacgacgaaatcacaaaaacaaacggaagaaaacagaaaatatgtgaaatcacttattcaattaggatagcaagaaaaactattcggatgggtgatt 404368  T
Q  112 tgtgtgtcaaaattgac 128  Q
    | ||  |||||||||||    
T  404369 tttggatcaaaattgac 404385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 35194 - 35062
Alignment:
Q  12 agagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatat--gtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtga 109  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||    
T  35194 agagatgatgaaatcgcaaaaacaaacgaaagaaaacagaaaatatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtga 35095  T
Q  110 tttgtgtgtcaaaattgactccaaatcacctct 142  Q
    ||| || |||||||||||| | |||||||||||    
T  35094 tttttgggtcaaaattgaccctaaatcacctct 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 2438 - 2600
Alignment:
Q  21 gaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttgtgtgtca 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| || | |||||||||| || ||||    
T  2438 gaaatcacaaaa-caaacgaaagaaaacagaaaatatgtgaaatcacttattcgattatgatagaaggaaaaacaactcag-agggtgatttttgggtca 2535  T
Q  121 aaattgactccaaatcacctctcaa--aaaacaagaagaagaaaatggtgacaactagggtttga 183  Q
    ||| |||| | |||||||| ||  |  | || ||||||||||||| |||||| ||||||||||||    
T  2536 aaaatgaccctaaatcacccctagaggataaaaagaagaagaaaagggtgacgactagggtttga 2600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 13255 - 13411
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgat----agaatgaaaaacaattcggaaggg 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||    | ||  |||||||||||||| |||    
T  13255 cagagacgacgaaatcacaaaaacaaacaaaagaaaacagaaaagatgtgaaatcacttattcaattaggataaaaaaaaaaaaaaacaattcggagggg 13354  T
Q  107 tgatttgtgtgtcaaaattgactccaaatcacctctc--aaaaaacaagaagaagaa 161  Q
    |||||| ||  ||||||||||| | ||||||||||||  |||| | |||||||||||    
T  13355 tgatttttggatcaaaattgaccctaaatcacctctctgaaaagaaaagaagaagaa 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 1685 - 1605
Alignment:
Q  11 cagagacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaa 91  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  1685 cagagacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttattcaattatggtagaaggaaa 1605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 4080 - 4202
Alignment:
Q  14 agacgacgaaatcacaaaaacaaacgaaagaaaacagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaagggtgatttg 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| | || |||| ||  | | |||||||     
T  4080 agacgacgaaatcacaaaaacaaacgaaagaaaacataaaatatgtgaaatcacttatttaattaggatagaa-ggaagacaactcaaaggagtgatttt 4178  T
Q  114 tgtgtcaaaattgactccaaatca 137  Q
    ||||||||||||||| | ||||||    
T  4179 tgtgtcaaaattgaccctaaatca 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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