View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4723-Insertion-2 (Length: 892)

Name: NF4723-Insertion-2
Description: NF4723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4723-Insertion-2
NF4723-Insertion-2
[»] chr7 (40 HSPs)
chr7 (218-649)||(25047471-25047912)
chr7 (8-226)||(25047031-25047252)
chr7 (735-892)||(25047937-25048091)
chr7 (505-550)||(1046582-1046627)
chr7 (505-553)||(7872738-7872786)
chr7 (505-557)||(8261433-8261485)
chr7 (505-553)||(46987109-46987157)
chr7 (514-553)||(19793544-19793583)
chr7 (514-557)||(24839507-24839550)
chr7 (515-553)||(6384874-6384912)
chr7 (506-552)||(9522936-9522982)
chr7 (512-553)||(2916125-2916166)
chr7 (505-550)||(22690026-22690071)
chr7 (505-550)||(26009302-26009347)
chr7 (505-553)||(8084450-8084498)
chr7 (505-553)||(27462426-27462474)
chr7 (513-553)||(27833399-27833439)
chr7 (505-553)||(37624566-37624614)
chr7 (516-552)||(38553842-38553878)
chr7 (513-553)||(40187634-40187674)
chr7 (505-553)||(47155094-47155142)
chr7 (506-553)||(10423984-10424031)
chr7 (505-552)||(31292759-31292806)
chr7 (515-557)||(3231076-3231118)
chr7 (511-553)||(5041362-5041404)
chr7 (513-546)||(7994882-7994915)
chr7 (515-552)||(9139477-9139514)
chr7 (505-550)||(16537526-16537571)
chr7 (505-550)||(16628091-16628136)
chr7 (513-558)||(18773754-18773799)
chr7 (516-553)||(21050223-21050260)
chr7 (505-546)||(23069847-23069888)
chr7 (505-557)||(23639489-23639542)
chr7 (513-558)||(31414116-31414161)
chr7 (516-553)||(35165556-35165593)
chr7 (519-552)||(37864449-37864482)
chr7 (515-552)||(43539104-43539141)
chr7 (513-550)||(45151403-45151440)
chr7 (505-554)||(45425475-45425524)
chr7 (505-550)||(48837893-48837938)
[»] chr6 (29 HSPs)
chr6 (505-554)||(28592677-28592726)
chr6 (505-553)||(2726407-2726455)
chr6 (505-553)||(9333970-9334018)
chr6 (506-553)||(9973241-9973288)
chr6 (518-556)||(10778860-10778898)
chr6 (514-552)||(12808893-12808931)
chr6 (512-553)||(655746-655787)
chr6 (505-554)||(4450284-4450333)
chr6 (516-552)||(8138459-8138495)
chr6 (505-553)||(8569732-8569780)
chr6 (505-553)||(11456366-11456413)
chr6 (513-553)||(20744161-20744201)
chr6 (505-553)||(25165300-25165348)
chr6 (505-553)||(29431482-29431530)
chr6 (506-553)||(34828329-34828377)
chr6 (513-552)||(9111071-9111110)
chr6 (505-552)||(12700411-12700458)
chr6 (506-553)||(16390452-16390499)
chr6 (506-544)||(8917632-8917670)
chr6 (508-558)||(14550541-14550591)
chr6 (512-558)||(15046913-15046959)
chr6 (521-554)||(334162-334195)
chr6 (505-550)||(12306347-12306392)
chr6 (505-554)||(12412299-12412348)
chr6 (505-553)||(12841867-12841916)
chr6 (505-554)||(24373700-24373749)
chr6 (513-558)||(24623315-24623360)
chr6 (505-550)||(27907941-27907986)
chr6 (505-577)||(29740483-29740553)
[»] chr5 (41 HSPs)
chr5 (505-553)||(26655487-26655535)
chr5 (505-553)||(26927072-26927120)
chr5 (505-577)||(32559305-32559375)
chr5 (505-577)||(40715939-40716009)
chr5 (505-553)||(6489030-6489078)
chr5 (505-553)||(6624799-6624847)
chr5 (513-553)||(26409276-26409316)
chr5 (505-552)||(31708136-31708183)
chr5 (515-557)||(37791077-37791119)
chr5 (514-551)||(1257153-1257190)
chr5 (513-553)||(5150080-5150121)
chr5 (517-554)||(25607060-25607097)
chr5 (518-550)||(7215776-7215808)
chr5 (513-557)||(18489074-18489118)
chr5 (505-553)||(22522791-22522839)
chr5 (517-553)||(23118053-23118089)
chr5 (505-553)||(37932353-37932401)
chr5 (505-553)||(42168935-42168983)
chr5 (506-553)||(5846052-5846099)
chr5 (506-553)||(9595575-9595621)
chr5 (506-553)||(16089473-16089520)
chr5 (506-553)||(22498965-22499011)
chr5 (505-552)||(32339759-32339806)
chr5 (506-553)||(42707998-42708045)
chr5 (512-554)||(3222753-3222795)
chr5 (516-554)||(4763187-4763225)
chr5 (522-552)||(36162896-36162926)
chr5 (515-553)||(37614340-37614378)
chr5 (505-557)||(4374931-4374984)
chr5 (505-558)||(9893661-9893714)
chr5 (516-553)||(12611036-12611073)
chr5 (513-550)||(16094083-16094120)
chr5 (505-550)||(17083583-17083628)
chr5 (516-549)||(17465396-17465429)
chr5 (505-558)||(26030441-26030494)
chr5 (512-553)||(26590730-26590771)
chr5 (505-554)||(28604408-28604457)
chr5 (516-553)||(33014245-33014282)
chr5 (505-558)||(35412975-35413027)
chr5 (516-553)||(40175676-40175713)
chr5 (505-554)||(43396876-43396925)
[»] chr2 (47 HSPs)
chr2 (505-553)||(2256994-2257042)
chr2 (513-552)||(25274827-25274866)
chr2 (505-553)||(24393268-24393316)
chr2 (505-553)||(24592836-24592884)
chr2 (506-558)||(41853383-41853435)
chr2 (515-553)||(3904225-3904263)
chr2 (505-555)||(17452652-17452702)
chr2 (505-550)||(2264823-2264868)
chr2 (512-553)||(5028879-5028920)
chr2 (505-577)||(20455892-20455962)
chr2 (505-554)||(21258638-21258687)
chr2 (505-550)||(22607178-22607223)
chr2 (505-550)||(27152379-27152424)
chr2 (505-550)||(42102113-42102158)
chr2 (512-552)||(6579278-6579318)
chr2 (506-558)||(12126887-12126939)
chr2 (513-553)||(12599863-12599903)
chr2 (505-557)||(24548136-24548188)
chr2 (505-553)||(29544650-29544698)
chr2 (505-553)||(34903540-34903588)
chr2 (505-553)||(39384152-39384200)
chr2 (505-553)||(41187447-41187495)
chr2 (505-548)||(27411120-27411163)
chr2 (506-553)||(41859875-41859922)
chr2 (515-557)||(4557771-4557813)
chr2 (515-553)||(23407018-23407056)
chr2 (515-553)||(24593399-24593437)
chr2 (512-545)||(2939780-2939813)
chr2 (512-553)||(4927446-4927487)
chr2 (516-553)||(6765633-6765670)
chr2 (513-558)||(9547407-9547452)
chr2 (505-550)||(10723965-10724010)
chr2 (512-553)||(11810379-11810420)
chr2 (516-553)||(12124568-12124605)
chr2 (519-552)||(18782544-18782577)
chr2 (505-549)||(19595468-19595513)
chr2 (505-558)||(25186232-25186285)
chr2 (505-554)||(26999132-26999181)
chr2 (513-554)||(27412834-27412875)
chr2 (505-550)||(27848184-27848229)
chr2 (505-558)||(33064004-33064057)
chr2 (517-558)||(33830844-33830885)
chr2 (512-553)||(34685961-34686002)
chr2 (512-553)||(34708382-34708423)
chr2 (516-553)||(41526777-41526814)
chr2 (512-553)||(42791318-42791359)
chr2 (508-553)||(43117183-43117228)
[»] chr8 (31 HSPs)
chr8 (515-557)||(44293594-44293636)
chr8 (505-553)||(1244695-1244743)
chr8 (505-557)||(26914061-26914113)
chr8 (513-553)||(30623316-30623356)
chr8 (505-553)||(38763505-38763553)
chr8 (514-553)||(7433163-7433202)
chr8 (505-552)||(9192217-9192264)
chr8 (505-552)||(19260569-19260616)
chr8 (517-558)||(574402-574443)
chr8 (505-558)||(6038265-6038318)
chr8 (516-553)||(15188922-15188959)
chr8 (513-550)||(28439985-28440022)
chr8 (515-552)||(41603085-41603122)
chr8 (505-553)||(12748924-12748972)
chr8 (505-553)||(27044880-27044928)
chr8 (512-552)||(31466242-31466282)
chr8 (505-553)||(32051522-32051570)
chr8 (514-550)||(41625220-41625256)
chr8 (514-553)||(33373751-33373790)
chr8 (514-553)||(34073754-34073793)
chr8 (512-558)||(1877659-1877705)
chr8 (522-552)||(2181152-2181182)
chr8 (520-550)||(19701349-19701379)
chr8 (505-558)||(34997476-34997530)
chr8 (505-558)||(36059351-36059405)
chr8 (515-553)||(39821907-39821945)
chr8 (505-550)||(3650546-3650591)
chr8 (514-559)||(6099979-6100024)
chr8 (517-546)||(6439026-6439055)
chr8 (513-550)||(13958837-13958874)
chr8 (505-550)||(31685242-31685286)
[»] chr4 (64 HSPs)
chr4 (505-554)||(11144655-11144704)
chr4 (505-558)||(49041971-49042024)
chr4 (513-553)||(47806254-47806294)
chr4 (505-553)||(49473668-49473716)
chr4 (505-553)||(56497598-56497646)
chr4 (505-552)||(3936651-3936698)
chr4 (513-552)||(22164267-22164306)
chr4 (506-553)||(37800854-37800901)
chr4 (515-553)||(1657030-1657068)
chr4 (515-553)||(14542760-14542798)
chr4 (515-553)||(37254971-37255009)
chr4 (515-553)||(49308843-49308881)
chr4 (505-550)||(3580740-3580785)
chr4 (505-558)||(9783917-9783970)
chr4 (505-554)||(10006362-10006411)
chr4 (512-553)||(24785459-24785500)
chr4 (512-553)||(24822766-24822807)
chr4 (512-553)||(52132299-52132340)
chr4 (513-577)||(56564981-56565043)
chr4 (505-553)||(20799384-20799432)
chr4 (518-554)||(21266885-21266921)
chr4 (505-553)||(29568609-29568657)
chr4 (513-557)||(32180849-32180893)
chr4 (505-553)||(36071167-36071215)
chr4 (505-553)||(38374980-38375028)
chr4 (505-553)||(39974525-39974573)
chr4 (505-553)||(43034332-43034380)
chr4 (505-553)||(45029595-45029643)
chr4 (521-552)||(160733-160764)
chr4 (514-557)||(6087766-6087809)
chr4 (506-553)||(7371539-7371586)
chr4 (518-553)||(9028075-9028110)
chr4 (518-553)||(12698620-12698655)
chr4 (515-550)||(18903758-18903793)
chr4 (505-552)||(27655755-27655801)
chr4 (516-558)||(6459925-6459967)
chr4 (515-553)||(30420865-30420903)
chr4 (515-553)||(32737735-32737773)
chr4 (517-555)||(34834008-34834046)
chr4 (515-553)||(43722788-43722826)
chr4 (515-553)||(44221470-44221508)
chr4 (515-553)||(56329559-56329597)
chr4 (512-553)||(6474462-6474503)
chr4 (505-546)||(10035295-10035336)
chr4 (512-553)||(10564462-10564503)
chr4 (517-550)||(11198790-11198823)
chr4 (505-553)||(11692674-11692723)
chr4 (513-550)||(14202477-14202514)
chr4 (512-553)||(16431639-16431680)
chr4 (513-577)||(16432955-16433017)
chr4 (512-545)||(19486706-19486739)
chr4 (513-550)||(24664989-24665026)
chr4 (508-553)||(25783442-25783487)
chr4 (513-554)||(26866444-26866485)
chr4 (505-557)||(28116917-28116970)
chr4 (516-553)||(29808269-29808306)
chr4 (505-557)||(32206670-32206723)
chr4 (512-557)||(36662366-36662411)
chr4 (516-553)||(37735812-37735849)
chr4 (505-554)||(42316814-42316863)
chr4 (517-554)||(45343814-45343851)
chr4 (508-553)||(48226491-48226536)
chr4 (505-550)||(54294412-54294457)
chr4 (521-554)||(54500591-54500624)
[»] scaffold0008 (1 HSPs)
scaffold0008 (518-558)||(119201-119241)
[»] chr3 (51 HSPs)
chr3 (505-557)||(16792964-16793016)
chr3 (505-553)||(25441490-25441538)
chr3 (505-553)||(53996322-53996370)
chr3 (514-553)||(13829076-13829115)
chr3 (514-553)||(26610492-26610531)
chr3 (514-553)||(35191816-35191855)
chr3 (515-553)||(25505701-25505739)
chr3 (506-552)||(28965768-28965814)
chr3 (513-558)||(7827526-7827571)
chr3 (505-554)||(8075807-8075856)
chr3 (516-553)||(21245816-21245853)
chr3 (505-550)||(25730428-25730473)
chr3 (512-553)||(54230096-54230137)
chr3 (516-553)||(55494712-55494749)
chr3 (505-553)||(1149059-1149107)
chr3 (513-553)||(2186425-2186465)
chr3 (513-553)||(7464489-7464529)
chr3 (505-553)||(8238587-8238635)
chr3 (505-553)||(14149536-14149584)
chr3 (512-552)||(19939038-19939078)
chr3 (505-553)||(27143069-27143117)
chr3 (505-553)||(28130924-28130972)
chr3 (505-553)||(32843252-32843300)
chr3 (514-577)||(33745100-33745161)
chr3 (505-553)||(38130949-38130997)
chr3 (505-553)||(45096049-45096097)
chr3 (505-553)||(48688137-48688185)
chr3 (505-553)||(48849753-48849801)
chr3 (515-551)||(53207995-53208031)
chr3 (505-552)||(4760131-4760178)
chr3 (518-553)||(8747239-8747274)
chr3 (514-553)||(21914070-21914109)
chr3 (505-552)||(27432258-27432305)
chr3 (505-552)||(28244094-28244141)
chr3 (506-553)||(30200849-30200896)
chr3 (506-553)||(52119399-52119446)
chr3 (525-578)||(6000678-6000729)
chr3 (515-557)||(7859492-7859534)
chr3 (512-550)||(15507268-15507306)
chr3 (505-558)||(39721205-39721259)
chr3 (512-550)||(48376861-48376899)
chr3 (513-550)||(4947824-4947861)
chr3 (513-558)||(7824825-7824870)
chr3 (505-550)||(14771357-14771402)
chr3 (512-553)||(21506755-21506796)
chr3 (505-550)||(22251450-22251495)
chr3 (505-557)||(30269158-30269211)
chr3 (512-553)||(34442444-34442485)
chr3 (507-552)||(42074127-42074172)
chr3 (512-553)||(44579659-44579700)
chr3 (513-554)||(46226023-46226064)
[»] chr1 (35 HSPs)
chr1 (505-553)||(41973278-41973326)
chr1 (514-557)||(29233973-29234016)
chr1 (517-552)||(29798118-29798153)
chr1 (505-552)||(34083361-34083408)
chr1 (514-552)||(9398412-9398450)
chr1 (505-554)||(3136678-3136727)
chr1 (505-550)||(3481587-3481632)
chr1 (513-558)||(3693794-3693839)
chr1 (513-554)||(5280653-5280694)
chr1 (516-553)||(10132445-10132482)
chr1 (505-553)||(24752637-24752686)
chr1 (512-557)||(35337120-35337165)
chr1 (505-550)||(49431983-49432028)
chr1 (514-546)||(4859113-4859145)
chr1 (512-552)||(11681247-11681287)
chr1 (505-553)||(16033440-16033488)
chr1 (505-553)||(21638136-21638184)
chr1 (513-553)||(32944759-32944799)
chr1 (505-545)||(34083626-34083666)
chr1 (518-550)||(34485903-34485935)
chr1 (505-553)||(38448856-38448904)
chr1 (505-553)||(42045362-42045410)
chr1 (505-557)||(52441501-52441553)
chr1 (514-553)||(29987111-29987150)
chr1 (506-553)||(30937498-30937545)
chr1 (515-553)||(21400023-21400061)
chr1 (515-553)||(29251777-29251815)
chr1 (516-553)||(5033566-5033603)
chr1 (505-557)||(9574809-9574862)
chr1 (512-549)||(11354015-11354052)
chr1 (513-554)||(13401619-13401660)
chr1 (516-553)||(25165093-25165130)
chr1 (512-553)||(25532996-25533037)
chr1 (512-553)||(28039857-28039898)
chr1 (512-553)||(45481516-45481557)
[»] scaffold0426 (1 HSPs)
scaffold0426 (505-550)||(5830-5875)
[»] scaffold0350 (1 HSPs)
scaffold0350 (505-558)||(1266-1319)
[»] scaffold0328 (1 HSPs)
scaffold0328 (505-553)||(7002-7051)
[»] scaffold0025 (1 HSPs)
scaffold0025 (513-577)||(64219-64281)
[»] scaffold0354 (1 HSPs)
scaffold0354 (505-553)||(7210-7258)
[»] scaffold0066 (1 HSPs)
scaffold0066 (505-553)||(17527-17575)
[»] scaffold0026 (1 HSPs)
scaffold0026 (505-553)||(75348-75396)
[»] scaffold0011 (1 HSPs)
scaffold0011 (506-554)||(189963-190011)
[»] scaffold0057 (1 HSPs)
scaffold0057 (527-557)||(35197-35227)
[»] scaffold0445 (1 HSPs)
scaffold0445 (505-550)||(4496-4541)


Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-160; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 218 - 649
Target Start/End: Original strand, 25047471 - 25047912
Alignment:
Q  218 tactttttattatgaagcgaaaaatgtagaagagtttgtgattgtgaaaaagacctttgaccacaatcctacaacagatttatttatggtcctagttcta 317  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25047471 tactttttattatgaagcgaagaatgtagaagagtttctgattgtgaaaaagacctttgaccacaatcctacaacagatttatttatggtcctagttcta 25047570  T
Q  318 cactacgtaccatgtaggtaatggtcaaggtcacaattgatttttattgaaaaggaagaattgatcttttgatacactataagcatttcgtatacaacta 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25047571 cactacgtaccatgtaggtaatggtcaaggtcacaattgatttttattgaaaaggaagaattgatctattgatacactataagcatttcgtatacaacta 25047670  T
Q  418 cacctcctttaattgctgaactagcacaagattataaaaagaaaat---cattgattcatcatcctcgggaagatggtataannnnnnnngtggtgaccg 514  Q
    |||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||| |||||||||||||         | |||||||    
T  25047671 cacctcctttaattgctgaactagcacaagatcataaaaagaaaatcaccattgattcatcatcctcgcgaagatggtataatttttttttttgtgaccg 25047770  T
Q  515 g-----ggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctcataaagaccaaagatggtataact-----ttaa 604  Q
    |     ||||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||||||| |||||||     | ||    
T  25047771 ggattcggttcgaa-tgcagaccttacatatattatgcattgtccatatatcagttgaactaagttc-taaagaccaaagatgatataacttaaaataaa 25047868  T
Q  605 atacgggaagagtattaagaagaaagatacagtgtttaatccata 649  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  25047869 atacgggaagagtattaagaag-aagatacagtgtttaatccata 25047912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 25047031 - 25047252
Alignment:
Q  8 taattaaattataaaatttcaaacaacctcttaaggtatactcattttcattttcaagtcgaaccatatgttatttaagatactttacacaagtttatgc 107  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25047031 taattaaattagaaaattttaaacaacctcttaaggtatactcattttcattttcaagtcgaaccatatgttatttaagatactttacacaagtttatgc 25047130  T
Q  108 aatgcttgctgccgcgtaa----ttctcaatggtaaaaataaaatgtt-agctacggtttaatgtgttttatgcaacctttaaataccttcattaaagat 202  Q
    |||||||||||||||||||    |||||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25047131 aatgcttgctgccgcgtaattccttctcaatggtaaaa--aatatgttaagctacggtttaatgtgttttatgcaacctttaaatactttcattaaagat 25047228  T
Q  203 gctctaattataccatacttttta 226  Q
    ||||||||||||||||||||||||    
T  25047229 gctctaattataccatacttttta 25047252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 735 - 892
Target Start/End: Original strand, 25047937 - 25048091
Alignment:
Q  735 ttttctgtctctgtttgttctccccattgctaaagtttttaaatag-aaaatacttttattgttacaaaaaactaatctaaccgaaggcccacaaataca 833  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||    
T  25047937 ttttctctctctgtttgttctccccattgctaaagtttttaaatagaaaaatac-tttattgttac-aaaaactaatctaa-cgaagacccacaaataca 25048033  T
Q  834 tccatgttagccgttaattctatctctaaaagtatccaggtttcccgctcacggtcctt 892  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  25048034 tccatgttagccgttaattctatctct-aaagtatccatgtttcccgctcacgttcctt 25048091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 1046627 - 1046582
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||    
T  1046627 gtggtgatcgggattcgaaccccagaccttacatatattatgcatt 1046582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 7872738 - 7872786
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| || |||||||||||||||||||| ||||||||||||||||||    
T  7872738 gtggtgtcctgggttcgaaccccagaccttgcatatattatgcattgtc 7872786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 8261433 - 8261485
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  8261433 gtggtggccgggattcgaaccccaaaccttacatattttatgcattgtctata 8261485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 46987157 - 46987109
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  46987157 gtggtgtccggggttcgaaccccggaccttgcatatattatgcattgtc 46987109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Complemental strand, 19793583 - 19793544
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  19793583 ggggttcgaaccccagaccttacatatattatacattgtc 19793544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 24839550 - 24839507
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  24839550 ggggatcgaaccccagaccttacatattttatgcattgtctata 24839507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 6384912 - 6384874
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6384912 gggttcgaaccccagaccttgcatatattatgcattgtc 6384874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 9522982 - 9522936
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  9522982 tggtggccggggttcgaaccccaaaccttgcatatattatgcattgt 9522936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 2916166 - 2916125
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  2916166 ccggggttcgaatcccagaccttgcatatattatgcattgtc 2916125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 22690026 - 22690071
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||    
T  22690026 gtggtgtccggggttcgaaccccaaaccttgcatatattatgcatt 22690071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 26009347 - 26009302
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||    
T  26009347 gtggtgtccggagttcgaaccccagaccttgcatatattatgcatt 26009302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 8084498 - 8084450
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||| ||||| ||||||||||||    
T  8084498 gtggtggccggggttcgaaccccggaccttgcatattttatgcattgtc 8084450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 27462426 - 27462474
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  27462426 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 27462474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 27833399 - 27833439
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  27833399 cggggtttgaaccccggaccttacatatattatgcattgtc 27833439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 37624614 - 37624566
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||    
T  37624614 gtggtggccgggattcgaacccccgaccttgcatatattatgcattgtc 37624566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 38553878 - 38553842
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38553878 ggttcgaaccccaaaccttacatatattatgcattgt 38553842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 40187634 - 40187674
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  40187634 cggggtttgaaccgcagaccttacatatattatgcattgtc 40187674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 47155094 - 47155142
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||  |||||| ||||||||||||||||||    
T  47155094 gtggtgtccggggttcgaaccctggaccttgcatatattatgcattgtc 47155142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 10424031 - 10423984
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||| ||||||||| ||||||||||| |||||    
T  10424031 tggtggccggggttcgaacctcagaccttatatatattatgcgttgtc 10423984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 31292759 - 31292806
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| |||| |||||||||||||||||| ||| |||||||||||||    
T  31292759 gtggtggccggagttcgaaccccagaccttgcatgtattatgcattgt 31292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 557
Target Start/End: Complemental strand, 3231118 - 3231076
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||||| ||||||||||||||| |||||| |||||||||    
T  3231118 gggttcgaactccagaccttacatattttatgcgttgtctata 3231076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 511 - 553
Target Start/End: Complemental strand, 5041404 - 5041362
Alignment:
Q  511 accggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  5041404 accggtgtttgaaccccagaccttgcatatattatgcattgtc 5041362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 546
Target Start/End: Original strand, 7994882 - 7994915
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatg 546  Q
    ||||||| ||||||||||||||||||||||||||    
T  7994882 cggggtttgaaccccagaccttacatatattatg 7994915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 552
Target Start/End: Complemental strand, 9139514 - 9139477
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  9139514 gggttcgaactccagactttacatatattatgcattgt 9139477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 16537526 - 16537571
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||    
T  16537526 gtggtgaccgaggtttgaaccccagaccttgtatatattatgcatt 16537571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 16628136 - 16628091
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||    
T  16628136 gtggtgaccgaggtttgaaccccagaccttgtatatattatgcatt 16628091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 18773754 - 18773799
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| ||||||| |||||||||||| |||||||||||| ||||    
T  18773754 cggggtttgaaccccggaccttacatattttatgcattgtccatat 18773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 21050223 - 21050260
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  21050223 ggttcgaaacccagaccttgcatatattatgcattgtc 21050260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 546
Target Start/End: Original strand, 23069847 - 23069888
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatg 546  Q
    |||||| ||||||||||||||||| ||||| |||||||||||    
T  23069847 gtggtgtccggggttcgaaccccataccttgcatatattatg 23069888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 23639489 - 23639542
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  23639489 gtggtgtctggggttcgaacccgagaccttgcatatatttatgcattgtctata 23639542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 31414161 - 31414116
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| |||| ||||||| ||||||||||||| |||||||||||    
T  31414161 cggggtttgaactccagaccctacatatattatgtattgtctatat 31414116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 35165593 - 35165556
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  35165593 ggttcgaacctcagaccttacatatattatgtattgtc 35165556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 552
Target Start/End: Complemental strand, 37864482 - 37864449
Alignment:
Q  519 tcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||||||| |||||||||||||||||    
T  37864482 tcgaaccccagaccttgcatatattatgcattgt 37864449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 552
Target Start/End: Original strand, 43539104 - 43539141
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  43539104 gggtttgaaccccggaccttacatatattatgcattgt 43539141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 45151440 - 45151403
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  45151440 cggggtttgaaccccaaaccttacatatattatgcatt 45151403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 45425524 - 45425475
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||||| ||||||||||  ||||| |||||||||||||||||||    
T  45425524 gtggtggccgggattcgaaccccgaaccttgcatatattatgcattgtct 45425475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 48837938 - 48837893
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| ||||||||||||||||| || || |||||||||||||||    
T  48837938 gtggtggccggggttcgaaccccaaactttgcatatattatgcatt 48837893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 28592677 - 28592726
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  28592677 gtggtgtccgaggttcgaaccccagaccttacatatattatgcattgtct 28592726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 2726407 - 2726455
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2726407 gtggtgaccggggttcgaaccccggaccttgcatatattatgcattgtc 2726455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 9333970 - 9334018
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  9333970 gtggtgtccgaggttcgaaccccaaaccttacatatattatgcattgtc 9334018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 9973288 - 9973241
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  9973288 tggtggccggagttcgaaccccaaaccttacatatattatgcattgtc 9973241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 10778898 - 10778860
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtctat 556  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  10778898 ttcgaacctcagaccttacatatattatgcattgtctat 10778860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 552
Target Start/End: Complemental strand, 12808931 - 12808893
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12808931 ggggttcgaaccccagaccttgcatatattatgcattgt 12808893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 655746 - 655787
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  655746 ccggggttcgaaccccggaccttgcatatattatgcattgtc 655787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 4450333 - 4450284
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||| | |||||||||| |||||| |||||||||||||||||||    
T  4450333 gtggtgaccgagattcgaaccccggaccttgcatatattatgcattgtct 4450284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 8138459 - 8138495
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8138459 ggtttgaaccccagaccttacatatattatgcattgt 8138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 8569780 - 8569732
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  8569780 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 8569732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 11456366 - 11456413
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  11456366 gtggtggccggggtttgaacccc-gaccttacatatattatgcattgtc 11456413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 20744201 - 20744161
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  20744201 cggggtttgaaccccagaccttgcatatattatgcattgtc 20744161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 25165348 - 25165300
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| | ||||||||||| || |||||||||||||||||||||||||    
T  25165348 gtggtggctggggttcgaacgccggaccttacatatattatgcattgtc 25165300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 29431530 - 29431482
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||| ||||||| ||||||||||||| |||||||||||||    
T  29431530 gtggtgtccggggatcgaacctcagaccttacatacattatgcattgtc 29431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 34828377 - 34828329
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacata-tattatgcattgtc 553  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  34828377 tggtggccggggttcgaacctcagaccttacatattattatgcattgtc 34828329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 552
Target Start/End: Complemental strand, 9111110 - 9111071
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  9111110 cggggttcgaaccccggaccttgcatatattatgcattgt 9111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 12700411 - 12700458
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| ||||||||| ||||| ||||||| |||||||||||||||||    
T  12700411 gtggtggccggggttcaaaccctagaccttgcatatattatgcattgt 12700458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 16390499 - 16390452
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  16390499 tggtggccgaggtttgaaccccggaccttacatatattatgcattgtc 16390452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 506 - 544
Target Start/End: Complemental strand, 8917670 - 8917632
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatatta 544  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  8917670 tggtggccggggtttgaaccccagaccttacatatatta 8917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 508 - 558
Target Start/End: Complemental strand, 14550591 - 14550541
Alignment:
Q  508 gtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| |||||||||||| ||| || ||||| |||||||||||||||||    
T  14550591 gtgaccgaggttcgaaccccggactttgcatattttatgcattgtctatat 14550541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 15046913 - 15046959
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||||| |||||||||||  | |||||||||||||||||||||||    
T  15046913 ccggggtttgaaccccagacaatgcatatattatgcattgtctatat 15046959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 554
Target Start/End: Complemental strand, 334195 - 334162
Alignment:
Q  521 gaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||||| |||||||||||||||||||    
T  334195 gaaccccagaccttgcatatattatgcattgtct 334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 12306392 - 12306347
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  12306392 gtggtggccggggtttgaacctcagaccttacatatattattcatt 12306347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 12412348 - 12412299
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||||  ||||| ||||| |||||||| |||||||||||||||||||    
T  12412348 gtggtgacgagggttagaaccgcagaccttgcatatattatgcattgtct 12412299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 12841867 - 12841916
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtc 553  Q
    |||||| |||| ||||||||||| ||||||||||||| ||||||||||||    
T  12841867 gtggtgtccggtgttcgaaccccggaccttacatatatttatgcattgtc 12841916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 24373700 - 24373749
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| | |||||| ||||||| |||||| |||||||||||||||||||    
T  24373700 gtggtggctggggtttgaacccctgaccttgcatatattatgcattgtct 24373749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 24623315 - 24623360
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| |||||||  |||||||||||||||||||||||| ||||    
T  24623315 cggggtttgaaccccgaaccttacatatattatgcattgtccatat 24623360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 27907941 - 27907986
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| |||||||||||||| ||||| |||||||||    
T  27907941 gtggtggccggggtttgaaccccagaccttgcatattttatgcatt 27907986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 29740553 - 29740483
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||| |||||||| ||||||| |||||| | ||||||||||||||||   ||| || ||||||||||||||    
T  29740553 gtggtggccggggtttgaaccccggaccttgcgtatattatgcattgtc--cataccaattgagctaagctca 29740483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 26655535 - 26655487
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  26655535 gtggtggccggggttcgaaccccggaccttacatatattatgcattgtc 26655487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 26927120 - 26927072
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  26927120 gtggtggccggggttcgaaccccggaccttacatatattatgcattgtc 26927072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 32559375 - 32559305
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||| ||||| || |||||||||||||||||||| ||||||||||||   |||||| ||||||||||||||    
T  32559375 gtggtggccgggatttgaaccccagaccttacatattttatgcattgtc--aatatcaattgagctaagctca 32559305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 40715939 - 40716009
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||   |||||| ||||||||||||||    
T  40715939 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc--catatcaattgagctaagctca 40716009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 6489078 - 6489030
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  6489078 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtc 6489030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 6624847 - 6624799
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  6624847 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtc 6624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 26409316 - 26409276
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  26409316 cggggttcgaaccccggaccttacatatattatgcattgtc 26409276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 31708136 - 31708183
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  31708136 gtggtgtccgaggttcgaaccccagaccttgcatatattatgcattgt 31708183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 557
Target Start/End: Original strand, 37791077 - 37791119
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  37791077 gggttcgaatcccagaccttgcatatattatgcattgtctata 37791119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 551
Target Start/End: Original strand, 1257153 - 1257190
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattg 551  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1257153 ggggttcgaaccccagaccttacatattttatgcattg 1257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 5150080 - 5150121
Alignment:
Q  513 cggggttcgaaccccagaccttacata-tattatgcattgtc 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  5150080 cggggttcgaaccccagaccttacatattattatgcattgtc 5150121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 554
Target Start/End: Original strand, 25607060 - 25607097
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25607060 gttcgaaccccagaccttgcatatattatgcattgtct 25607097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 550
Target Start/End: Complemental strand, 7215808 - 7215776
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||||||||||||||||||||||||||    
T  7215808 ttcgaaccccagaccttacatatattatgcatt 7215776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 18489074 - 18489118
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||    
T  18489074 cggggttcaaactccagaccttgcatatattatgcattgtctata 18489118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 22522791 - 22522839
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  22522791 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 22522839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 553
Target Start/End: Original strand, 23118053 - 23118089
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23118053 gttcgaaccccaaaccttacatatattatgcattgtc 23118089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 37932401 - 37932353
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| || ||||||||||||| |||||| ||||||||||||||||||    
T  37932401 gtggtggccagggttcgaaccccggaccttgcatatattatgcattgtc 37932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 42168935 - 42168983
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| | ||||||||||||||||||||| |||||| |||||||||||    
T  42168935 gtggtgtctggggttcgaaccccagaccttgcatatactatgcattgtc 42168983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 5846099 - 5846052
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||| ||||||||||| || ||||||||||||||||||    
T  5846099 tggtgtccggggtttgaaccccagactttgcatatattatgcattgtc 5846052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 9595621 - 9595575
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  9595621 tggtgaccggggtttgaacccc-gaccttacatattttatgcattgtc 9595575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 16089520 - 16089473
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||| |||||||||| || |||||||||||||||    
T  16089520 tggtggccggggttcgaatcccagaccttgcaaatattatgcattgtc 16089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 22499011 - 22498965
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  22499011 tggtgtccggggttcgaaccc-agaccttgcatatattatgcattgtc 22498965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 32339806 - 32339759
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  32339806 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgt 32339759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 42708045 - 42707998
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||||| |||||| |||||||||| ||||||||||||||||||    
T  42708045 tggtggccgggattcgaatcccagaccttgcatatattatgcattgtc 42707998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 3222795 - 3222753
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||||| |||||||| ||||||||||| |||||||    
T  3222795 ccggggttcgaacctcagaccttgcatatattatgtattgtct 3222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 554
Target Start/End: Original strand, 4763187 - 4763225
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  4763187 ggtttgaaccccggaccttacatatattatgcattgtct 4763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 522 - 552
Target Start/End: Original strand, 36162896 - 36162926
Alignment:
Q  522 aaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||||||||||||||||||||||    
T  36162896 aaccccagaccttacatatattatgcattgt 36162926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 37614340 - 37614378
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  37614340 gggttcgaatcccagaccttgcatatattatgcattgtc 37614378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 4374931 - 4374984
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  4374931 gtggtgtctggggttcgaacccgagaccttgcatatatttatgcattgtctata 4374984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 9893661 - 9893714
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| | |||||| |||||||||||||| ||||| ||||||||| |||||||    
T  9893661 gtggtggctggggtttgaaccccagaccttgcatattttatgcattatctatat 9893714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 12611036 - 12611073
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  12611036 ggttcgaaccccagaccttgcatattttatgcattgtc 12611073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 16094120 - 16094083
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  16094120 cggggtttgaaccccagatcttacatatattatgcatt 16094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 17083583 - 17083628
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| | |||||| |||| |||||||||||||||||||||||||    
T  17083583 gtggtggctggggtttgaactccagaccttacatatattatgcatt 17083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 17465396 - 17465429
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcat 549  Q
    ||||||||||||||||||| ||||||||||||||    
T  17465396 ggttcgaaccccagaccttgcatatattatgcat 17465429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 26030441 - 26030494
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||||||||||||||| |||||| ||  |||||||||||||| ||||    
T  26030441 gtggtggccggggttcgaaccccggaccttgcaagtattatgcattgtccatat 26030494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 26590771 - 26590730
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||    
T  26590771 ccgggattcaaaccccagaccttgcatatattatgcattgtc 26590730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 28604408 - 28604457
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||| | |||||||||| |||||||||| |||||||||||||||    
T  28604408 gtggtgtccgtgattcgaaccccggaccttacatttattatgcattgtct 28604457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 33014245 - 33014282
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  33014245 ggtttgaaccccagacctttcatatattatgcattgtc 33014282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 35413027 - 35412975
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||||||||||||||  |||||| |||||||||||||||||| ||||    
T  35413027 gtggtggccggggttcgaacccg-gaccttgcatatattatgcattgtccatat 35412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 40175713 - 40175676
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  40175713 ggttcgaaccccagatcatacatatattatgcattgtc 40175676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 43396925 - 43396876
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| |||||  |||||| || ||||||||||||||||||||||||||    
T  43396925 gtggtgtccgggaatcgaacaccggaccttacatatattatgcattgtct 43396876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 2257042 - 2256994
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2257042 gtggtggccggggttcgaaccccagaccttgcatatattatgcattgtc 2256994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 513 - 552
Target Start/End: Original strand, 25274827 - 25274866
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25274827 cggggttcgaaccccagaccttacatatattatgcattgt 25274866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 24393316 - 24393268
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  24393316 gtggtgtccggggttcgaacctcagaccttgcatatattatgcattgtc 24393268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 24592836 - 24592884
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  24592836 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtc 24592884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 41853435 - 41853383
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||| ||||||||||||| || |||||||||||||||||||||||| |||||    
T  41853435 tggtggccggggttcgaacgccggaccttacatatattatgcattgtttatat 41853383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 3904263 - 3904225
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  3904263 gggtttgaaccccagaccttacatatattatgcattgtc 3904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 555
Target Start/End: Complemental strand, 17452702 - 17452652
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtcta 555  Q
    |||||| || ||||| ||||||||||||||||||||||||| |||||||||    
T  17452702 gtggtggccagggtttgaaccccagaccttacatatattattcattgtcta 17452652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 2264868 - 2264823
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| || |||||||||||||| |||||||||||||||||||||    
T  2264868 gtggtgtccagggttcgaaccccaaaccttacatatattatgcatt 2264823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 5028920 - 5028879
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  5028920 ccggggtttgaaccccaaaccttacatatattatgcattgtc 5028879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 20455962 - 20455892
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||   ||| || ||||||||||||||    
T  20455962 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtc--cataccaattgagctaagctca 20455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 21258687 - 21258638
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||||| ||||||||||||||||| ||||||| |||||||||||    
T  21258687 gtggtggccgggattcgaaccccagaccttgcatatatcatgcattgtct 21258638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 22607223 - 22607178
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||    
T  22607223 gtggtgtccggggctcgaaccccggaccttacatatattatgcatt 22607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 27152424 - 27152379
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| || |||||||||||||||||||| |||||||||||||||    
T  27152424 gtggtgtcctgggttcgaaccccagaccttgcatatattatgcatt 27152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 42102158 - 42102113
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||    
T  42102158 gtggtggccggggttcgaaccacagacattacatatattatgcatt 42102113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 512 - 552
Target Start/End: Original strand, 6579278 - 6579318
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  6579278 ccgggattcgaaccccagaccttgcatatattatgcattgt 6579318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 12126939 - 12126887
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||| ||||||||| ||||| || ||||||||||||||||| |||||||||||    
T  12126939 tggtaaccggggtttgaacctcaaaccttacatatattatgtattgtctatat 12126887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 12599863 - 12599903
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  12599863 cggggttcgaaccccagaccttgcatatattatgtattgtc 12599903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 557
Target Start/End: Complemental strand, 24548188 - 24548136
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||| || || ||||||||| | ||||||||||||||||||||||||||||    
T  24548188 gtggtggcctggattcgaaccctataccttacatatattatgcattgtctata 24548136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 29544698 - 29544650
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  29544698 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 29544650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 34903588 - 34903540
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  34903588 gtggtgtccggggttcgaacctcagaccttgcatatattatgcactgtc 34903540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 39384152 - 39384200
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  39384152 gtggtgatcgggactcgaacctcagaccttacatatattatgcattgtc 39384200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 41187447 - 41187495
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||||    
T  41187447 gtggtgaccggggttcgaaccccggactttgcatattttatgcattgtc 41187495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Complemental strand, 27411163 - 27411120
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgca 548  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  27411163 gtggtggccggggttcgaaccccggaccttgcatatattatgca 27411120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 41859922 - 41859875
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||| |||||||||||||| ||||| ||||||||||||    
T  41859922 tggtggccggggtttgaaccccagaccttgcatattttatgcattgtc 41859875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 557
Target Start/End: Original strand, 4557771 - 4557813
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||| ||||| | |||||||||||||||||||||||||||||    
T  4557771 gggtttgaaccacggaccttacatatattatgcattgtctata 4557813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 23407018 - 23407056
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  23407018 gggtttgaaccccagaccttgcatatattatgcattgtc 23407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 24593437 - 24593399
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  24593437 gggttcgaaccccggaccttgcatatattatgcattgtc 24593399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 2939780 - 2939813
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattat 545  Q
    ||||||||||||||||||||||| ||||||||||    
T  2939780 ccggggttcgaaccccagaccttgcatatattat 2939813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 4927446 - 4927487
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||||||| ||||||||||||||||||| |||||    
T  4927446 ccggggtttgaaccccggaccttacatatattatgctttgtc 4927487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 6765670 - 6765633
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  6765670 ggttcgaaccccggaccttacatattttatgcattgtc 6765633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 9547407 - 9547452
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| |||||||| ||||| |||||||||||||||||| ||||    
T  9547407 cggggtttgaaccccaaaccttgcatatattatgcattgtccatat 9547452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 10724010 - 10723965
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||    
T  10724010 gtggtggccggggtttgaacctcagaccttgcatatattatgcatt 10723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 11810379 - 11810420
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| || || |||||||||||||||    
T  11810379 ccggggttcgaaccccagactttgcacatattatgcattgtc 11810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 12124605 - 12124568
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  12124605 ggttcgaaccccggaccttgcatatattatgcattgtc 12124568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 552
Target Start/End: Original strand, 18782544 - 18782577
Alignment:
Q  519 tcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||||||| |||||||||||||||||    
T  18782544 tcgaaccccagaccttgcatatattatgcattgt 18782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 19595468 - 19595513
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacata-tattatgcat 549  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||    
T  19595468 gtggtggccggggttcgaaccccagaccttgcatattattatgcat 19595513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 25186232 - 25186285
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| | |||||| ||||||| |||||| |||||||||||||||||| ||||    
T  25186232 gtggtggctggggtttgaaccccggaccttgcatatattatgcattgtccatat 25186285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 26999181 - 26999132
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| |||| ||| ||||| |||||||| |||||||||||||||||||    
T  26999181 gtggtggccggagtttgaaccgcagaccttgcatatattatgcattgtct 26999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 27412834 - 27412875
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||| ||||  ||||||||||||||||||||||||||||    
T  27412834 cggggtttgaacaacagaccttacatatattatgcattgtct 27412875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 27848229 - 27848184
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| ||||||| |||||| |||||||||||||||    
T  27848229 gtggtggccggggtttgaaccccggaccttgcatatattatgcatt 27848184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 33064057 - 33064004
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||| |||||||| || |||||| |||||||||||||||||| ||||    
T  33064057 gtggtggccggagttcgaactccggaccttgcatatattatgcattgtccatat 33064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 558
Target Start/End: Original strand, 33830844 - 33830885
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  33830844 gttcgaactccagaccttatatattttatgcattgtctatat 33830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 34685961 - 34686002
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| ||||||||||| ||||||||||| |||||||||||||    
T  34685961 ccggtgttcgaaccccggaccttacatacattatgcattgtc 34686002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 34708382 - 34708423
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| ||||||||||| ||||||||||| |||||||||||||    
T  34708382 ccggtgttcgaaccccggaccttacatacattatgcattgtc 34708423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 41526777 - 41526814
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  41526777 ggttcgaaccccagaccttgcatatactatgcattgtc 41526814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 42791359 - 42791318
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  42791359 ccggggtttgaaccccggaccttgcatatattatgcattgtc 42791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 43117183 - 43117228
Alignment:
Q  508 gtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||| ||||| |||||||| ||||||||||||||||||    
T  43117183 gtgactggggtttgaacctcagaccttgcatatattatgcattgtc 43117228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 557
Target Start/End: Complemental strand, 44293636 - 44293594
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  44293636 gggttcgaaccccagatcttacatatattatgcattgtctata 44293594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 1244695 - 1244743
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||    
T  1244695 gtggtgtccggggttcgaaccccagaccttgtatatattatgcattgtc 1244743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 26914061 - 26914113
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  26914061 gtggtgaccagggttcgaaccccagaccttacatattttatacattatctata 26914113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 30623356 - 30623316
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  30623356 cggggttcgaaccccagaccttgcatatattatgcattgtc 30623316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 38763505 - 38763553
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| || |||||||||||||||||||| ||||||||||||||||||    
T  38763505 gtggtggccagggttcgaaccccagaccttgcatatattatgcattgtc 38763553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Complemental strand, 7433202 - 7433163
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  7433202 ggggttcgaatcccagaccttacatatattatgcattgtc 7433163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 9192217 - 9192264
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  9192217 gtggtggccggggtttgaaccccagactttacatatattatgcattgt 9192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 19260569 - 19260616
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  19260569 gtggtggccggggtttgaaccccggaccttacatatattatgcattgt 19260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 558
Target Start/End: Complemental strand, 574443 - 574402
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  574443 gttcgaactccggaccttacatatattatgcattgtctatat 574402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 6038265 - 6038318
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  6038265 gtggtggccggagtttgaactccagaccttacatatattatgcattgtccatat 6038318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 15188959 - 15188922
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15188959 ggttcgaaccccagatcttacatatattatgcattgtc 15188922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 28440022 - 28439985
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  28440022 cggggtttgaaccccagaccttacatatattatgcatt 28439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 552
Target Start/End: Complemental strand, 41603122 - 41603085
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  41603122 gggtttgaaccccagaccttacatatattatgcattgt 41603085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 12748972 - 12748924
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  12748972 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 12748924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 27044880 - 27044928
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||| |||||||||||||||||||| ||||||    
T  27044880 gtggtgtccggggtttgaacctcagaccttacatatattatgaattgtc 27044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 512 - 552
Target Start/End: Original strand, 31466242 - 31466282
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  31466242 ccggggttcgaacccgagaccttacatctattatgcattgt 31466282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 32051522 - 32051570
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  32051522 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 32051570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 550
Target Start/End: Complemental strand, 41625256 - 41625220
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41625256 ggggttcgaaccctagaccttacatatattatgcatt 41625220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 33373751 - 33373790
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  33373751 ggggtttgaaccccagaccttacatatattatgaattgtc 33373790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 34073754 - 34073793
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  34073754 ggggttcgaacgtcagaccttacatatattatgcattgtc 34073793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 1877659 - 1877705
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||    
T  1877659 ccgggattcgaacccgtgaccttgcatatattatgcattgtctatat 1877705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 522 - 552
Target Start/End: Complemental strand, 2181182 - 2181152
Alignment:
Q  522 aaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||||||||||||||||||||||    
T  2181182 aaccccagaccttacatatattatgcattgt 2181152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 550
Target Start/End: Original strand, 19701349 - 19701379
Alignment:
Q  520 cgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||||||||||||||||||||||||    
T  19701349 cgaaccccagaccttacatatattatgcatt 19701379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 34997530 - 34997476
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctatat 558  Q
    |||||| |||||||||||||||  |||||| |||||| |||||||||||||||||    
T  34997530 gtggtgtccggggttcgaacccatgaccttgcatatatttatgcattgtctatat 34997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 36059351 - 36059405
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatatt-atgcattgtctatat 558  Q
    |||||| |||||||||||||||  |||||| |||||||| |||||||||||||||    
T  36059351 gtggtgtccggggttcgaaccctcgaccttgcatatattgatgcattgtctatat 36059405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 39821945 - 39821907
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  39821945 gggtttgaaccccagaccttgcatatattatgcattgtc 39821907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 3650591 - 3650546
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| |||||||  |||||||||||||||||||||    
T  3650591 gtggtggccggggtttgaaccccgaaccttacatatattatgcatt 3650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 559
Target Start/End: Original strand, 6099979 - 6100024
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtctatata 559  Q
    |||||||||| | ||||||| |||||||||||||||||||| ||||    
T  6099979 ggggttcgaatctcagacctcacatatattatgcattgtctttata 6100024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 546
Target Start/End: Complemental strand, 6439055 - 6439026
Alignment:
Q  517 gttcgaaccccagaccttacatatattatg 546  Q
    ||||||||||||||||||||||||||||||    
T  6439055 gttcgaaccccagaccttacatatattatg 6439026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 13958874 - 13958837
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  13958874 cgggattcgaaccccaaaccttacatatattatgcatt 13958837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 31685286 - 31685242
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  31685286 gtggtggccgggtttcgaacccca-accttacatatattatgcatt 31685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 11144655 - 11144704
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  11144655 gtggtgtccggggttcaaaccccagaccttgcatatattatgcattgtct 11144704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 49041971 - 49042024
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||||||| ||||||| |||||| |||||||||||||||||||||||    
T  49041971 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtctatat 49042024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 47806254 - 47806294
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  47806254 cggggttcgaaccccagaccttgcatatattatgcattgtc 47806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 49473716 - 49473668
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  49473716 gtggtgactggggttcgaaccccggaccttgcatatattatgcattgtc 49473668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 56497598 - 56497646
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  56497598 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtc 56497646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 3936698 - 3936651
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  3936698 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgt 3936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 513 - 552
Target Start/End: Original strand, 22164267 - 22164306
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22164267 cggggtttgaaccccagaccttacatatattatgcattgt 22164306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 37800901 - 37800854
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  37800901 tggtgatcggggttcgaaccccagacctcgcatatattatgcattgtc 37800854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 1657030 - 1657068
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  1657030 gggttcgaaccccaaaccttacatatattatgcattgtc 1657068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 14542760 - 14542798
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  14542760 gggttcgaaccccagaccttgcatatattatgcattgtc 14542798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 37255009 - 37254971
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  37255009 gggttcgaaccccggaccttacatatattatgcattgtc 37254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 49308881 - 49308843
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  49308881 gggttcgaaccccagaccttgcatatattatgcattgtc 49308843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 3580785 - 3580740
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||||||| |||||||||| |||||||||||||||    
T  3580785 gtggtgtccggggttcgaatcccagaccttgcatatattatgcatt 3580740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 9783970 - 9783917
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||    
T  9783970 gtggtggccgaggtttgaacctcagaccttacatatattatgcattgtccatat 9783917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 10006411 - 10006362
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||||  ||||||||||||||||| |||||||||||||||||||    
T  10006411 gtggtggccggtattcgaaccccagaccttgcatatattatgcattgtct 10006362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 24785459 - 24785500
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  24785459 ccggggttcgaaccccagaccttgtatatattatgcattgtc 24785500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 24822807 - 24822766
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  24822807 ccggggttcgaaccccagaccttgtatatattatgcattgtc 24822766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 52132299 - 52132340
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  52132299 ccggggttcgaaccacagaccttgcatatattatgcattgtc 52132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 577
Target Start/End: Original strand, 56564981 - 56565043
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||||||||||| ||||||| ||||| ||||||||||||   |||||| ||||||||||||||    
T  56564981 cggggttcgaaccctagaccttgcatattttatgcattgtc--catatcaattgagctaagctca 56565043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 20799384 - 20799432
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  20799384 gtggtgaccagggtttgaaccccggaccttgcatatattatgcattgtc 20799432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 554
Target Start/End: Original strand, 21266885 - 21266921
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21266885 ttcgaaccccaaaccttacatatattatgcattgtct 21266921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 29568657 - 29568609
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| | |||||||||||| | |||||||||||||||||||||||||    
T  29568657 gtggtgtctggggttcgaacctcggaccttacatatattatgcattgtc 29568609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 32180893 - 32180849
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||    
T  32180893 cggggttcgaaccccagactttgcatattttatgcattgtctata 32180849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 36071215 - 36071167
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  36071215 gtggtgcccggcgttcgaaccccgaaccttacatatattatgcattgtc 36071167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 38375028 - 38374980
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  38375028 gtggtggccggggtttgaactccagaccttgcatatattatgcattgtc 38374980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 39974573 - 39974525
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  39974573 gtggtgtccgaggtttgaaccccagaccttccatatattatgcattgtc 39974525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 43034332 - 43034380
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  43034332 gtggtggccggggtttgaacctcagaccttgcatatattatgcattgtc 43034380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 45029595 - 45029643
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  45029595 gtggtgaccgatattcgaaccccaaaccttacatatattatgcattgtc 45029643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 552
Target Start/End: Complemental strand, 160764 - 160733
Alignment:
Q  521 gaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||||||||||||||||||||    
T  160764 gaaccccagaccttacatatattatgcattgt 160733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 6087809 - 6087766
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||    
T  6087809 ggggtttgaaccccagaccttgcatatattatgcattatctata 6087766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Original strand, 7371539 - 7371586
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||||| |||||| ||||||||||| ||||||    
T  7371539 tggtgtccggggttcgaaccccggaccttgcatatattatgtattgtc 7371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 553
Target Start/End: Original strand, 9028075 - 9028110
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9028075 ttcgaaccccagaccttacatattttatgcattgtc 9028110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 553
Target Start/End: Complemental strand, 12698655 - 12698620
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12698655 ttcgaaccccagaccttgcatatattatgcattgtc 12698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 550
Target Start/End: Original strand, 18903758 - 18903793
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18903758 gggtttgaaccccagaccttacatatattatgcatt 18903793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 27655801 - 27655755
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  27655801 gtggtggccggggttcgaaccc-agaccttgcatatattatgcattgt 27655755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 6459925 - 6459967
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||||| || ||||||||||||||||||||||||| ||||    
T  6459925 ggttcgaactccggaccttacatatattatgcattgtccatat 6459967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 30420903 - 30420865
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  30420903 gggttcgaaccctagaccttacatatattatacattgtc 30420865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 32737735 - 32737773
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  32737735 gggttcgaaccccagaccttgcatatattatacattgtc 32737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 517 - 555
Target Start/End: Original strand, 34834008 - 34834046
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtcta 555  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  34834008 gttcgaaccccggaccttgcatatattatgcattgtcta 34834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 43722826 - 43722788
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  43722826 gggtttgaaccccggaccttacatatattatgcattgtc 43722788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 44221508 - 44221470
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  44221508 gggttcgaacctcagaccttgcatatattatgcattgtc 44221470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 56329597 - 56329559
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  56329597 gggttcgaaccccaaaccttacatttattatgcattgtc 56329559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 6474503 - 6474462
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||||| | ||||| ||||||||||    
T  6474503 ccggggttcgaaccccagaccttgcttatatgatgcattgtc 6474462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 546
Target Start/End: Complemental strand, 10035336 - 10035295
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatg 546  Q
    |||||| |||||||| |||||||||||||| |||||||||||    
T  10035336 gtggtggccggggtttgaaccccagaccttgcatatattatg 10035295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 10564462 - 10564503
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||||| |||||||||||||||||||| ||||||    
T  10564462 ccggggtttgaacctcagaccttacatatattatgtattgtc 10564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 550
Target Start/End: Complemental strand, 11198823 - 11198790
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||||||||||||||||| |||||||||    
T  11198823 gttcgaaccccagaccttacatattttatgcatt 11198790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 11692723 - 11692674
Alignment:
Q  505 gtggtgaccggggttcgaacccc-agaccttacatatattatgcattgtc 553  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||    
T  11692723 gtggtgaccggagtttgaacccccagaccttgcatatattatgcattgtc 11692674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 14202477 - 14202514
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  14202477 cggggtttgaaccccggaccttacatatattatgcatt 14202514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 16431680 - 16431639
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| |||||||||||||| ||||| ||||||||||||    
T  16431680 ccggggtttgaaccccagaccttgcatattttatgcattgtc 16431639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 577
Target Start/End: Original strand, 16432955 - 16433017
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    ||||||| ||||| |||| |||| |||||||||||||||||  ||| |||| |||||||||||||    
T  16432955 cggggtttgaacctcagatcttatatatattatgcattgtc--tatgtcagctgagctaagctca 16433017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 19486706 - 19486739
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattat 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  19486706 ccggggttcgaaccccagatcttacatatattat 19486739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 24664989 - 24665026
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  24664989 cggggttcgaaccccggaccttgcatatattatgcatt 24665026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 25783442 - 25783487
Alignment:
Q  508 gtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||| ||||||| |||||| ||||||||||||||||||    
T  25783442 gtgaccggagtttgaaccccggaccttgcatatattatgcattgtc 25783487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 26866444 - 26866485
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  26866444 cggggtttgaaccccagcccttacatgtattatgcattgtct 26866485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 28116917 - 28116970
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| |||||||||||||||  |||||| |||||| ||||||||||||||||    
T  28116917 gtggtgtccggggttcgaacccgggaccttgcatatatttatgcattgtctata 28116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 29808269 - 29808306
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  29808269 ggttcgaaccccataccttgcatatattatgcattgtc 29808306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 32206670 - 32206723
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| | |||||||||||||  ||||||||||||| ||||||||||||||||    
T  32206670 gtggtgtctggggttcgaacccgggaccttacatatatttatgcattgtctata 32206723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 557
Target Start/End: Original strand, 36662366 - 36662411
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||||||||||| ||||||  |||| ||||||||||||||||    
T  36662366 ccggggttcgaacccctgaccttgtatattttatgcattgtctata 36662411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 37735849 - 37735812
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  37735849 ggtttgaacctcagaccttacatatattatgcattgtc 37735812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 42316814 - 42316863
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||| |||||||| | |||||| ||||||||||||| |||||    
T  42316814 gtggtgaccgggattcgaacctcggaccttgcatatattatgcactgtct 42316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 554
Target Start/End: Original strand, 45343814 - 45343851
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  45343814 gttcgaaccccggaccttacatatattatacattgtct 45343851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 48226491 - 48226536
Alignment:
Q  508 gtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||| || |||||||||||||| ||||| ||||||||||||    
T  48226491 gtgaccgggatttgaaccccagaccttgcatattttatgcattgtc 48226536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 54294412 - 54294457
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| ||||||| |||||| |||||||||||||||    
T  54294412 gtggtgtccggggtttgaaccccggaccttgcatatattatgcatt 54294457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 554
Target Start/End: Complemental strand, 54500624 - 54500591
Alignment:
Q  521 gaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||| ||||||||||||||||||||||||||    
T  54500624 gaaccccggaccttacatatattatgcattgtct 54500591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 558
Target Start/End: Original strand, 119201 - 119241
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  119201 ttcgaacctcagaccttacatatattatgcattgtctatat 119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 16792964 - 16793016
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||||||||||||| ||||||  |||||| ||||||||||||||||||||||    
T  16792964 gtggtgaccggggtttgaaccctggaccttgcatatattatgcattgtctata 16793016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 25441490 - 25441538
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  25441490 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtc 25441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 53996370 - 53996322
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  53996370 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtc 53996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 13829076 - 13829115
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  13829076 ggggttcgaaccccagaccttgcatatattatgcattgtc 13829115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 26610492 - 26610531
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26610492 ggggttcgaaccccataccttacatatattatgcattgtc 26610531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 35191816 - 35191855
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35191816 ggggttcgaaccccagaccttgcatatattatgcattgtc 35191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 25505701 - 25505739
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25505701 gggttcgaaccccagaccttgcatatattatgcattgtc 25505739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 28965768 - 28965814
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||    
T  28965768 tggtgaccggggtttgaaccccgaaccttacatatattatgcattgt 28965814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 7827571 - 7827526
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||    
T  7827571 cgggtttcgaactccagaccttacatatattatgcattgtccatat 7827526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 8075856 - 8075807
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  8075856 gtggtggccggggtttgaacctcagaccttgcatatattatgcattgtct 8075807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 21245853 - 21245816
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21245853 ggtttgaaccccagaccttacatatattatgcattgtc 21245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 25730473 - 25730428
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||    
T  25730473 gtggtggccggggttcgaaccccagaccttgtatatattatgcatt 25730428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 54230096 - 54230137
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  54230096 ccggggttcgaaccccaaaccttgcatatattatgcattgtc 54230137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 55494749 - 55494712
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||| |||||||||||||||||||||||    
T  55494749 ggttcgaaccccagtccttacatatattatgcattgtc 55494712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 1149059 - 1149107
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| || |||||||||||| ||||||| ||||||||||||||||||    
T  1149059 gtggtgtccagggttcgaaccctagaccttgcatatattatgcattgtc 1149107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 2186425 - 2186465
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  2186425 cggggtttgaaccccagaccttacatatattatgtattgtc 2186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 7464489 - 7464529
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  7464489 cggggtttgaaccccggaccttacatatattatgcattgtc 7464529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 8238635 - 8238587
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||| ||| |||||||||||||| ||||||||||||||||||    
T  8238635 gtggtggccggagtttgaaccccagaccttgcatatattatgcattgtc 8238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 14149536 - 14149584
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  14149536 gtggtgtccggggttcgaaccccagaccttgcatacattatacattgtc 14149584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 512 - 552
Target Start/End: Original strand, 19939038 - 19939078
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  19939038 ccggcgttcgaaccccagacctttcatatattatgcattgt 19939078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 27143117 - 27143069
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| ||||||||| |||||||||||||||||| |||||||    
T  27143117 gtggtgtccgggattcgaaccctagaccttacatatattatacattgtc 27143069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 28130924 - 28130972
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||||||||||    
T  28130924 gtggtgtccgggattcaaaccccagaccttgcatatattatgcattgtc 28130972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 32843252 - 32843300
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||||||||||||| ||||| ||||||||||||    
T  32843252 gtggtggccggggtttgaaccccagaccttgcatattttatgcattgtc 32843300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 33745161 - 33745100
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    |||||| |||||||||||||| ||||| ||||||||||||   |||||| ||||||||||||||    
T  33745161 ggggtttgaaccccagaccttgcatattttatgcattgtc--catatcaattgagctaagctca 33745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 38130949 - 38130997
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  38130949 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 38130997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 45096097 - 45096049
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| | |||||||||||| |||||||| ||||||||||||||||||    
T  45096097 gtggtgtctggggttcgaaccacagaccttgcatatattatgcattgtc 45096049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 48688185 - 48688137
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| || ||||||||| || ||||||||||||||||||||||||    
T  48688185 gtggtgactggagttcgaacctcaaaccttacatatattatgcattgtc 48688137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 48849753 - 48849801
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||||||||    
T  48849753 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtc 48849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 551
Target Start/End: Complemental strand, 53208031 - 53207995
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattg 551  Q
    |||||||||||||||||||| ||||||||||||||||    
T  53208031 gggttcgaaccccagaccttgcatatattatgcattg 53207995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 4760178 - 4760131
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||||||| |||||| | |||||||| |||||||||||||||||    
T  4760178 gtggtgaccgggattcgaatctcagaccttgcatatattatgcattgt 4760131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 553
Target Start/End: Original strand, 8747239 - 8747274
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||| |||||||||||||||||||||||||    
T  8747239 ttcgaaccccggaccttacatatattatgcattgtc 8747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 21914070 - 21914109
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  21914070 ggggttcgaaccccataccttgcatatattatgcattgtc 21914109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 27432305 - 27432258
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| ||||  ||||||||||| |||||||||||||||||||||||    
T  27432305 gtggtggccggaattcgaaccccataccttacatatattatgcattgt 27432258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 28244094 - 28244141
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||| ||||||||||||||| |||||| ||||| |||||||||||    
T  28244094 gtggtgatcggggttcgaaccccggaccttgcatattttatgcattgt 28244141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 30200896 - 30200849
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||||||||||||| || ||||| ||||||||||||||||||    
T  30200896 tggtgtccggggttcgaacctcaaaccttgcatatattatgcattgtc 30200849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 52119446 - 52119399
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| ||||||||||||||||  ||||| ||||||||||||||||||    
T  52119446 tggtggccggggttcgaaccccgaaccttgcatatattatgcattgtc 52119399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 6000678 - 6000729
Alignment:
Q  525 cccagaccttacatatattatgcattgtctatatatcagttgagctaagctcat 578  Q
    |||| |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  6000678 cccaaaccttatatatattatgcattgtc--tatatcaattgagctaagctcat 6000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 557
Target Start/End: Original strand, 7859492 - 7859534
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||||||||  ||||||||||||||||||||| ||||||    
T  7859492 gggttcgaaccccgaaccttacatatattatgcattatctata 7859534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 550
Target Start/End: Original strand, 15507268 - 15507306
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  15507268 ccgggattcgaacctcagaccttacatatattatgcatt 15507306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 39721259 - 39721205
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctatat 558  Q
    |||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  39721259 gtggtgtccggggttcgaacccacgaccttacatatatttatacattgtctatat 39721205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 550
Target Start/End: Complemental strand, 48376899 - 48376861
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  48376899 ccgggattcgaaccccaaaccttacatatattatgcatt 48376861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 550
Target Start/End: Original strand, 4947824 - 4947861
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  4947824 cggggttcaaaccccagaccttacatattttatgcatt 4947861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 7824870 - 7824825
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  7824870 cgggtttcgaactccagaccttgcatatattatgtattgtctatat 7824825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 14771402 - 14771357
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| ||||| |||||||| |||||||| |||||||||||||||    
T  14771402 gtggtgtccgggattcgaacctcagaccttgcatatattatgcatt 14771357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 21506755 - 21506796
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  21506755 ccggggttcaaaccccagaccttgcatattttatgcattgtc 21506796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 22251450 - 22251495
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||||||||||| |||| | |||||||||||||||    
T  22251450 gtggtggccggggttcgaaccccggaccgtgcatatattatgcatt 22251495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 30269158 - 30269211
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| | ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  30269158 gtggtgtctggggttcgaacccgagaccttgcatatatttatgcattgtctata 30269211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 34442444 - 34442485
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||||||| |||||||||||| ||||||||||||    
T  34442444 ccggggtttgaaccccggaccttacatattttatgcattgtc 34442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 42074172 - 42074127
Alignment:
Q  507 ggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||| |||| ||||||||| |||||||| |||||||||||||||||    
T  42074172 ggtggccggagttcgaacctcagaccttgcatatattatgcattgt 42074127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 44579700 - 44579659
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||||||| |||||| ||||| ||||||||||||    
T  44579700 ccggggttcgaaccccggaccttgcatattttatgcattgtc 44579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 46226023 - 46226064
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||| || |||||| |||||||||||||||||||    
T  46226023 cggggttcgaactccggaccttgcatatattatgcattgtct 46226064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 41973326 - 41973278
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  41973326 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtc 41973278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 514 - 557
Target Start/End: Original strand, 29233973 - 29234016
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||    
T  29233973 ggggttcgaaccccagaccttgcatattttatgcattgtctata 29234016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 517 - 552
Target Start/End: Original strand, 29798118 - 29798153
Alignment:
Q  517 gttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||||||||||||||||||||||||    
T  29798118 gttcgaaccccagaccttacatatattatgcattgt 29798153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 34083408 - 34083361
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||    
T  34083408 gtggtggctggggttcgaaccccaaaccttacatatattatgcattgt 34083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 552
Target Start/End: Original strand, 9398412 - 9398450
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  9398412 ggggttcgaaccccagaccttacatatatcatgcattgt 9398450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 3136678 - 3136727
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  3136678 gtggtgtccggaattcgaaccctagaccttacatatattatgcattgtct 3136727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 3481632 - 3481587
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||    
T  3481632 gtggtggccggggtttgaaccccagaccttgcatatattatgcatt 3481587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 3693794 - 3693839
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  3693794 cggggtttgaacctcagaccttacatatattatgctttgtctatat 3693839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 554
Target Start/End: Complemental strand, 5280694 - 5280653
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  5280694 cggggttcgaaccccagaccttgcatatattatgcactgtct 5280653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 10132445 - 10132482
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  10132445 ggttcgaaccccagaccttgcatatattatgcattgtc 10132482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 24752637 - 24752686
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacata-tattatgcattgtc 553  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  24752637 gtggtggccggggttcgaaccccagaccttgcatattattatgcattgtc 24752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 557
Target Start/End: Original strand, 35337120 - 35337165
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||    
T  35337120 ccggggttcgaaccgcagaccttatatatattatgcattatctata 35337165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 49431983 - 49432028
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||    
T  49431983 gtggtggccggggtttgaaccccggaccttacatatattatgcatt 49432028  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 546
Target Start/End: Complemental strand, 4859145 - 4859113
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatg 546  Q
    |||||||||||||||||||||||||||||||||    
T  4859145 ggggttcgaaccccagaccttacatatattatg 4859113  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 512 - 552
Target Start/End: Complemental strand, 11681287 - 11681247
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgt 552  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  11681287 ccggggtttgaaccccagaccttgcatatattatgcattgt 11681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 16033440 - 16033488
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||| ||| |||||||||||||| ||||||||||||||||||    
T  16033440 gtggtggccggagtttgaaccccagaccttgcatatattatgcattgtc 16033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 21638184 - 21638136
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||| |||||| ||||||| ||||||||||    
T  21638184 gtggtgtccggggttcgaaccccggaccttgcatatatcatgcattgtc 21638136  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 32944799 - 32944759
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  32944799 cggggttcgaaccccagacgttgcatatattatgcattgtc 32944759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 545
Target Start/End: Original strand, 34083626 - 34083666
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattat 545  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  34083626 gtggtgaccgcggttcgaaccccggaccttacatatattat 34083666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 550
Target Start/End: Complemental strand, 34485935 - 34485903
Alignment:
Q  518 ttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||||||||||||||||||||||||||||||    
T  34485935 ttcgaaccccagaccttacatatattatgcatt 34485903  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 38448856 - 38448904
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||    
T  38448856 gtggtgtccgggattcgaaccccggaccttgcatatattatgcattgtc 38448904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 42045362 - 42045410
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  42045362 gtggtggccggggtttgaactccagaccttgcatatattatgcattgtc 42045410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 52441501 - 52441553
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctata 557  Q
    |||||| ||||||||| ||| || |||||| ||||||||||||||||||||||    
T  52441501 gtggtggccggggttcaaacgccggaccttgcatatattatgcattgtctata 52441553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 553
Target Start/End: Original strand, 29987111 - 29987150
Alignment:
Q  514 ggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  29987111 ggggttcgaactccagaccttgcatatattatgcattgtc 29987150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 30937545 - 30937498
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||| |||| |||||||||||||||||| |||||||||| |||||||    
T  30937545 tggtgtccggagttcgaaccccagaccttgcatatattatacattgtc 30937498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Original strand, 21400023 - 21400061
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  21400023 gggttcgaacccaagaccttgcatatattatgcattgtc 21400061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 29251815 - 29251777
Alignment:
Q  515 gggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  29251815 gggttcgaacctcagaccttgcatatattatgcattgtc 29251777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 5033603 - 5033566
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  5033603 ggttcgaaccccagaccttgcatatattatgcactgtc 5033566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 557
Target Start/End: Complemental strand, 9574862 - 9574809
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatata-ttatgcattgtctata 557  Q
    |||||| | |||||||||||||  ||||||||||||| ||||||||||||||||    
T  9574862 gtggtgtctggggttcgaacccgggaccttacatatatttatgcattgtctata 9574809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 549
Target Start/End: Original strand, 11354015 - 11354052
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcat 549  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  11354015 ccggggttcaaaccccagaccttgcatatattatgcat 11354052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 554
Target Start/End: Complemental strand, 13401660 - 13401619
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  13401660 cggggtttgaaccccgaaccttacatatattatgcattgtct 13401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 25165093 - 25165130
Alignment:
Q  516 ggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  25165093 ggtttgaacccgagaccttacatatattatgcattgtc 25165130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 25533037 - 25532996
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  25533037 ccggggtttgaaccccggaccttgcatatattatgcattgtc 25532996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 28039857 - 28039898
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    ||||||||| |||| |||||||| ||||||||||||||||||    
T  28039857 ccggggttcaaacctcagaccttgcatatattatgcattgtc 28039898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 45481557 - 45481516
Alignment:
Q  512 ccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||| ||||||||||| |||||| ||||||||||||||||||    
T  45481557 ccggagttcgaaccccggaccttgcatatattatgcattgtc 45481516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 5830 - 5875
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||    
T  5830 gtggtgtctggggttcgaaccccagaccttacatatattatacatt 5875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 1319 - 1266
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtctatat 558  Q
    |||||| |||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  1319 gtggtggccggagtttgaactccagaccttacatatattatgcattgtccatat 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 7051 - 7002
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacata-tattatgcattgtc 553  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  7051 gtggtggccgggattcgaaccccagaccttacatattattatgcattgtc 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 577
Target Start/End: Complemental strand, 64281 - 64219
Alignment:
Q  513 cggggttcgaaccccagaccttacatatattatgcattgtctatatatcagttgagctaagctca 577  Q
    ||||||||||| ||| |||||| ||||||||||||||||||   ||| |||||||||||||||||    
T  64281 cggggttcgaatcccggaccttgcatatattatgcattgtc--cataccagttgagctaagctca 64219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Original strand, 7210 - 7258
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| |||||||||||||||||||||||| ||||| ||||| |||||    
T  7210 gtggtgtccggggttcgaaccccagaccttatatataatatgcgttgtc 7258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 17575 - 17527
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||||||||||    
T  17575 gtggtgtccgggattcgaaccccaaaccttgcatatattatgcattgtc 17527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 75396 - 75348
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcattgtc 553  Q
    |||||| ||||| |||||||||| |||||| ||||||||||||||||||    
T  75396 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtc 75348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 506 - 554
Target Start/End: Original strand, 189963 - 190011
Alignment:
Q  506 tggtgaccggggttcgaaccccagaccttacatatattatgcattgtct 554  Q
    |||||||| ||||| |||||||  |||||||||||||||||||||||||    
T  189963 tggtgaccagggtttgaaccccgaaccttacatatattatgcattgtct 190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 557
Target Start/End: Complemental strand, 35227 - 35197
Alignment:
Q  527 cagaccttacatatattatgcattgtctata 557  Q
    |||||||||||||||||||||||||||||||    
T  35227 cagaccttacatatattatgcattgtctata 35197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 4541 - 4496
Alignment:
Q  505 gtggtgaccggggttcgaaccccagaccttacatatattatgcatt 550  Q
    |||||| ||||| ||||||| | |||||||||||||||||||||||    
T  4541 gtggtgtccgggattcgaactctagaccttacatatattatgcatt 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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