View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4723-Insertion-4 (Length: 761)
Name: NF4723-Insertion-4
Description: NF4723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4723-Insertion-4 |
 | |
|
| [»] chr4 (5 HSPs) |
| |
|
| [»] chr1 (11 HSPs) |
| |
|
| [»] chr6 (17 HSPs) |
| |
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| [»] chr8 (6 HSPs) |
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| [»] chr3 (4 HSPs) |
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| [»] chr7 (5 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 355; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 151 - 517
Target Start/End: Complemental strand, 28630260 - 28629894
Alignment:
| Q |
151 |
attgtttccatgaaactgattgctttggtcactgcttgtatagttattgactggtttgtcctcatgaacgtgatgatgttcatggcttgcaccgaaattg |
250 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28630260 |
attgcttccatgaaactgattgctttggtcactgcttgtatagttattgactggtttgtcctcatgaacgtgatgatgttcatggcttgcaccgaaattg |
28630161 |
T |
|
| Q |
251 |
atatatgtttgttgatttatgttgaactcgatattgttgtccattctggtgctcgtgttatgaacggattgacgtttgttggctaattgtttcatctctg |
350 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28630160 |
atatatgtttgttgatttatgttgaactccatattgttgtccattctggtgctcgtgttatgaacggattgaagtttgttggctaattgtttcatctctg |
28630061 |
T |
|
| Q |
351 |
gtatttgtttcctttgtgatacatttctttttagaattctacacaatgtccaaatttcctgcatgtcaaggagaaaaatcattagaagatatgtttgttc |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28630060 |
gtatttgtttcctttgtgatacatttctttttagaattctacacaatgtccaaatttcctgcatgtcaaggagaaaaatcattagaagatatgtttgttc |
28629961 |
T |
|
| Q |
451 |
aatatgaaaaagatttaatttgatgtttcattgattgtaataggttggaattacccttgtaatccaa |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28629960 |
aatatgaaaaagatttaatttgatgtttcattgattgtaataggttggaattacccttgtaatccaa |
28629894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 28630380 - 28630270
Alignment:
| Q |
10 |
aactacatatgacaattatactatttacaaactaggtgaatcaacagcaaacctcacaactgatccaagctcatcccaattatcaaatggtaacaactca |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28630380 |
aactacatatgacaattatactatttacaaactaggtgaatcaacagcaaacctcacaactgatccaagctcatcccaattatcaaatggtaacaactca |
28630281 |
T |
|
| Q |
110 |
ttagcatcctc |
120 |
Q |
| |
|
||||||||||| |
|
|
| T |
28630280 |
ttagcatcctc |
28630270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 530 - 761
Target Start/End: Complemental strand, 21203508 - 21203281
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagt |
629 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||| ||||| |
|
|
| T |
21203508 |
aaagcaatgaaaataaaatgcaaatcaggattaaggcctgaacctatttacaaaagag-gaaaggaaggcaaaggctatcctatagcaaca----aaagt |
21203414 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaa |
728 |
Q |
| |
|
||||| |||||||||||| || |||| |||||| |||||||||| |||||||| ||||||||| | | | || || |||||| ||| |||||||||||| |
|
|
| T |
21203413 |
gtagcctgccaagaaagcttatggctgcacatgtccctaaagaattctaatcatatatagcatgtgtgaagcaaaaaagatgaatatcaaaatttcctaa |
21203314 |
T |
|
| Q |
729 |
tcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||| |
|
|
| T |
21203313 |
tcctctaatcatcatatttgggattgcttttga |
21203281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 28616068 - 28615943
Alignment:
| Q |
28 |
tactatttacaaactaggtgaatcaacagcaaacctcacaactgatccaagctcatcccaattatcaaatggtaacaactcattagcatcctccttaatc |
127 |
Q |
| |
|
||||||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| | | ||||||| |
|
|
| T |
28616068 |
tactatttacatactaggtgaatctgaaacaaaattcacaactgatccaagctcatcccaattatcaaatgataataactcattagcagcttgcttaatc |
28615969 |
T |
|
| Q |
128 |
caaaaatttgatgatggtgttacatt |
153 |
Q |
| |
|
||||||||||| ||| |||||||||| |
|
|
| T |
28615968 |
caaaaatttgaagattgtgttacatt |
28615943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 245 - 437
Target Start/End: Complemental strand, 28615812 - 28615620
Alignment:
| Q |
245 |
aaattgatatatgtttgttgatttatgttgaactcgatattgttgtccattctggtgctcgtgttatgaacggattgacgtttgttggctaattgtttca |
344 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| |||||| | | |||||| | ||| | | ||||| || | || | ||| | ||||| |||||| |
|
|
| T |
28615812 |
aaattgatatatgtttgttgatttgtgttcaactccatattgctattcattctactactcttttcatgaatggttcgatgcttggtagctaagggtttca |
28615713 |
T |
|
| Q |
345 |
tctctggtatttgtttcctttgtgatacatttctttttagaattctacacaatgtccaaatttcctgcatgtcaaggagaaaaatcattagaa |
437 |
Q |
| |
|
|||| || ||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28615712 |
catctgccatgcttttactttttgatacatttcttttgaaaattctacacaatgtccaaatttcctgcatgtcatatagaaaaatcattagaa |
28615620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 581
Target Start/End: Original strand, 21949748 - 21949800
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttaca |
581 |
Q |
| |
|
||||||||| ||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
21949748 |
caaagcaatcaaaataaaatgaaaaccaggattaaggcctgaacctgtttaca |
21949800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 740
Target Start/End: Complemental strand, 45212962 - 45212798
Alignment:
| Q |
579 |
acaaaagagagaaatgaagccaaaggctatcctatagcaac-aaaacaaagtgtagcatgccaag-aaagcatagggctccacatgcccctaaagaaatc |
676 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||||||||||| |||| |||| ||| | ||||| | |||||| ||||| ||| || |||| || || |
|
|
| T |
45212962 |
acaaaagagagaaaggaagccaaatgatatcctatagcaacaaaaataaagagtaacctgccatgaaaagcaaagggccgtgcatacctttaaaaaattc |
45212863 |
T |
|
| Q |
677 |
taatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcctctaatcac |
740 |
Q |
| |
|
||||||| ||||||||| |||||| || || |||||||| ||| ||||||||||||||||||| |
|
|
| T |
45212862 |
taatcaggcatagcatctgttatgcaaaatatatgagtatcaaaccttcctaatcctctaatcac |
45212798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 170; Significance: 8e-91; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 41310131 - 41309898
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
41310131 |
caaagcaatgaaaataaaatgcaaaccaggattaaggcttgaacctgtttacaaaagagagaaaggacgccaaaggctaccctatagcaacaaaacaaag |
41310032 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||| ||||||||||| |
|
|
| T |
41310031 |
tgtagcctgccaagaaagcatagggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaatttccta |
41309932 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||| |
|
|
| T |
41309931 |
atcctctaatcaccatatttgggattgattttga |
41309898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 546 - 761
Target Start/End: Original strand, 34160855 - 34161071
Alignment:
| Q |
546 |
aatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagtgtagcatgccaagaaa |
645 |
Q |
| |
|
|||||||| || |||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
34160855 |
aatgcaaatcattattaaggcctgagcatgtttacaaaagagagaaaggaagccaaaagctatcctatagcaacaaaacaaagtgtaacttgccaagaaa |
34160954 |
T |
|
| Q |
646 |
gcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcctctaatcaccata |
744 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||| ||||| | | | || || ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
34160955 |
gcatagggttgcacatgcccctaaagaaatctaatcagataaagcatatgtaaagcaaaatagatgagtatcaaaatttcctaatcctctaatcaccata |
34161054 |
T |
|
| Q |
745 |
tctaggattgcttttga |
761 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
34161055 |
tttaggattgcttttga |
34161071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 2049265 - 2049031
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgttt--acaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaa |
626 |
Q |
| |
|
|||||||||||||||| || ||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2049265 |
caaagcaatgaaaatataaagcaaatcaggattaaggcctgaacctatttgcacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaac-- |
2049168 |
T |
|
| Q |
627 |
agtgtagcatgccaagaaagcatagggctccacatgcccctaaagaa--atctaatcagatatagcatctattatgc-aattagatgagtattaaaattt |
723 |
Q |
| |
|
| ||||| ||||| |||| | |||||| || || ||||||||||| |||||||||| |||||| | |||||| || || |||||||| ||| || |
|
|
| T |
2049167 |
-gagtagcctgccatgaaaacgaagggctacatatacccctaaagaattttctaatcagacatagcagatgttatgcaaaatacatgagtatcaaacctt |
2049069 |
T |
|
| Q |
724 |
cctaatcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
2049068 |
cctaatcctctaatcacaatatttgggattgcttttga |
2049031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 529 - 624
Target Start/End: Original strand, 12763217 - 12763314
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgttt--acaaaagagagaaatgaagccaaaggctatcctatagcaacaaaac |
624 |
Q |
| |
|
|||||||||||||||| || ||||| || ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
12763217 |
caaagcaatgaaaatataaagcaaatcaggattaaggcctgaacctgtttacacaaaagagagaaaggaagccaaaagctatcctatagcaacaaaac |
12763314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 590
Target Start/End: Original strand, 10457425 - 10457482
Alignment:
| Q |
533 |
gcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagaga |
590 |
Q |
| |
|
||||||| ||||||||||||| || |||||||||||||||||||||||| |||||||| |
|
|
| T |
10457425 |
gcaatgagaataaaatgcaaatcaggattaaggcctgaacctgtttacacaagagaga |
10457482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 166; Significance: 2e-88; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 13129368 - 13129135
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
13129368 |
caaagcaatgaaaataaaatgcaaaccaggattaaggcctgaacctgtttacaaaagtaagaaaggaagccaaaggctaccctatagcaacaaaacaaag |
13129269 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || || |||||||| ||||||||||| |
|
|
| T |
13129268 |
tgtagcctgccaagaaagcatagggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaataaatgagtatcaaaatttccta |
13129169 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||| |
|
|
| T |
13129168 |
atcctctaatcaccatatttgggattgattttga |
13129135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 535 - 761
Target Start/End: Complemental strand, 3526125 - 3525899
Alignment:
| Q |
535 |
aatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagtgtagc |
634 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| | |
|
|
| T |
3526125 |
aatgaaaataaaatgcaaatcaggattaaggcctgaacctgtttacaaaagagagaaaggaagccaa-ggttatcctatagcaacaaaacaaagtgtaac |
3526027 |
T |
|
| Q |
635 |
atgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcctc |
733 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| | |||||| || ||||||||||| |||||||||| |||||| |
|
|
| T |
3526026 |
ctgccaagaaagcatagagctgcacatgcccctaaagaaatctaatcaaatatagcatatgttatgcaaaatagatgagtatcaaaatttcctgatcctc |
3525927 |
T |
|
| Q |
734 |
taatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
3525926 |
taatcaccatatctaggattgcttttga |
3525899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 529 - 761
Target Start/End: Original strand, 34106295 - 34106528
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |
|
|
| T |
34106295 |
caaagcaatgaaaataaaatgcaaaccatgattaaggcctgaacctgtttacaaaagagagaaaggaagccaaaggctaccctatagcaacaaaataaag |
34106394 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
| || | |||||||||||||||||| | ||||||||| ||||||| |||||||||||||| ||||| |||||| || ||||||||||| |||| ||| || |
|
|
| T |
34106395 |
tataacctgccaagaaagcatagggttgcacatgcccttaaagaattctaatcagatataacatctgttatgcaaaatagatgagtataaaaaattcata |
34106494 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||| |||||| | |||||| |||||| |
|
|
| T |
34106495 |
atcctctaatccccatatttgggattgattttga |
34106528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 27492063 - 27491830
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||| || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27492063 |
caaagcaatgaaaataaaattcaaaccatgattaaggcttgaatctatttacaaaagagagaaaggaagccaaaggctatcctatagcaacaaagcaaag |
27491964 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||||| | | |||||||||||||||| |||||| | ||||||| |||||||||||||||||||| |||||| || ||||||||||| ||||||| ||| |
|
|
| T |
27491963 |
tgtagcctactaagaaagcatagggctgcacatgtctttaaagaagtctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaattttcta |
27491864 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||| | || |||||||||| |
|
|
| T |
27491863 |
atcctctaatcaccatatttggggttgcttttga |
27491830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 52316303 - 52316083
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
52316303 |
caaagcaatgaaaataacatgcaaatcaggattaaggcatgaacctgtttacaaaagagagaaacgaaaccaaaggctatcctatagcaacaaaacaaag |
52316204 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgcaattagatgagtattaaaatttcctaa |
728 |
Q |
| |
|
|||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| | |||||| || |||||||||||| |
|
|
| T |
52316203 |
tgtaacttgccaagaaagcatagggctgcacatgcccctaaagaaatataatcagataaagcatttgttatgc------------atcaaaatttcctaa |
52316116 |
T |
|
| Q |
729 |
tcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
52316115 |
tcctctaatcaccatatctaggattgcttttga |
52316083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 530 - 759
Target Start/End: Complemental strand, 43699604 - 43699373
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagt |
629 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
43699604 |
aaagcaatgaaaatagaatgcaaacgaggattaaggcctgaacctgtttacaaaagaggaaaaggaagccaaaggctatcctatagcaacaaaactaagt |
43699505 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc--aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||| |||||||||| |||||| ||||||||||||| | | | || |||||| ||| ||||||||||| |
|
|
| T |
43699504 |
gtagcttgccaagaaagcatatggctgcacatgtccctaaagaattctaataagatatagcatctgtaaaacaaaaaaagatgaatatcaaaatttccta |
43699405 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgctttt |
759 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| |
|
|
| T |
43699404 |
atcctctaatcaccatatttgggattgctttt |
43699373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 601 - 761
Target Start/End: Complemental strand, 11084748 - 11084587
Alignment:
| Q |
601 |
aaggctatcctatagcaacaaaacaaagtgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatg |
700 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
11084748 |
aaggctaccctatagcaacaaaacaaagtgtagcctgccaagaaagcataggactgcacatgcccctaaagaattctaatcagatatagcatctgttatg |
11084649 |
T |
|
| Q |
701 |
c-aattagatgagtattaaaatttcctaatcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
| || ||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
11084648 |
caaaatagatgagtatcaaaatttcctaatcctccaatcaccatatttaggattgattttga |
11084587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 530 - 650
Target Start/End: Complemental strand, 41114744 - 41114626
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagt |
629 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41114744 |
aaagcaatcaaaatagaatgcaaaccaggat-aaggtctgaacctgtttacaaaagagggaag-gaagccaaaggctatcctatagcaacaaaactaagt |
41114647 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcata |
650 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
41114646 |
gtagcctgccaagaaagcata |
41114626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 529 - 644
Target Start/End: Original strand, 45602845 - 45602957
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||| || |||||| ||||||||| ||| ||||||||| |
|
|
| T |
45602845 |
caaagcaatgaaaataaaatgcaaatcaggattaaagcctcaacctgtttacaaaagagagaaagga---caaaggatatcctatatcaataaaacaaag |
45602941 |
T |
|
| Q |
629 |
tgtagcatgccaagaa |
644 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
45602942 |
tgtaacttgccaagaa |
45602957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 652 - 761
Target Start/End: Complemental strand, 41114597 - 41114487
Alignment:
| Q |
652 |
ggctccacatgcccctaaagaaatctaatcagatatagcatctattatgcaatta-gatgagtattaaaatttcctaatcctctaatcaccatatctagg |
750 |
Q |
| |
|
|||| |||||| |||||||||| |||||||||||||||||||| | | ||| | | ||| ||| ||||||||||||||||||||||||||||| | || |
|
|
| T |
41114597 |
ggctgcacatgtccctaaagaattctaatcagatatagcatctgtaaaacaaaaaagttgaatatcaaaatttcctaatcctctaatcaccatatttggg |
41114498 |
T |
|
| Q |
751 |
attgcttttga |
761 |
Q |
| |
|
||| ||||||| |
|
|
| T |
41114497 |
attacttttga |
41114487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 573
Target Start/End: Complemental strand, 11084817 - 11084773
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacc |
573 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11084817 |
caaagcaatgaaaataaaatgcaaaccaggattaaggcctgaacc |
11084773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 153; Significance: 1e-80; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 534 - 761
Target Start/End: Complemental strand, 8859411 - 8859183
Alignment:
| Q |
534 |
caatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagtgtag |
633 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8859411 |
caatgaaaataaaatgcaaattaggattaaggcctgaatctgtttacaaaagagagaaaggaagccaaaggctatcctatagaaacaaaacaaagtgtag |
8859312 |
T |
|
| Q |
634 |
catgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcct |
732 |
Q |
| |
|
| | |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||| || || || ||||| |||||||||||||||| |
|
|
| T |
8859311 |
cctaccaagaaagcatagggctgcacatgcccctaatgaaatctaataagatatagcatctgttatgcaaaataaataagtatcaaaatttcctaatcct |
8859212 |
T |
|
| Q |
733 |
ctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
8859211 |
ctaatcacaatatctaggattgcttttga |
8859183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5764362 - 5764574
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5764362 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5764461 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5764462 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5764561 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5764562 |
ctaatcctctaat |
5764574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5767897 - 5768109
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5767897 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5767996 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5767997 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5768096 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5768097 |
ctaatcctctaat |
5768109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5771432 - 5771644
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5771432 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5771531 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5771532 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5771631 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5771632 |
ctaatcctctaat |
5771644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5774967 - 5775179
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5774967 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5775066 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5775067 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5775166 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5775167 |
ctaatcctctaat |
5775179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5778502 - 5778714
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5778502 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5778601 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5778602 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5778701 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5778702 |
ctaatcctctaat |
5778714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5782037 - 5782249
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5782037 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5782136 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5782137 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5782236 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5782237 |
ctaatcctctaat |
5782249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5785572 - 5785784
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5785572 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5785671 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5785672 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5785771 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5785772 |
ctaatcctctaat |
5785784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5789107 - 5789319
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5789107 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5789206 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5789207 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5789306 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5789307 |
ctaatcctctaat |
5789319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5792642 - 5792854
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5792642 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5792741 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5792742 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5792841 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5792842 |
ctaatcctctaat |
5792854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5796177 - 5796389
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5796177 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5796276 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5796277 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5796376 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5796377 |
ctaatcctctaat |
5796389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5799712 - 5799924
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5799712 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5799811 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5799812 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5799911 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5799912 |
ctaatcctctaat |
5799924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5803247 - 5803459
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5803247 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5803346 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5803347 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5803446 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5803447 |
ctaatcctctaat |
5803459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5806782 - 5806994
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5806782 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5806881 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5806882 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5806981 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5806982 |
ctaatcctctaat |
5806994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5810317 - 5810529
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5810317 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5810416 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5810417 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5810516 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5810517 |
ctaatcctctaat |
5810529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5813852 - 5814064
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5813852 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5813951 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5813952 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5814051 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5814052 |
ctaatcctctaat |
5814064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 530 - 737
Target Start/End: Original strand, 5817387 - 5817599
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa--gagagaaatgaagccaaaggctatcctatagcaac-aaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5817387 |
aaagcaatgaaaataaaatgcaaattaggattaaggtttgaacctgtttacacaatagagagaaaggaagccaaaggctatcctatagcaacaaaaacaa |
5817486 |
T |
|
| Q |
627 |
agtgtagcatgcca-agaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttc |
724 |
Q |
| |
|
|| ||||| ||||| | ||| || |||||| || || |||||||||| |||||||||| |||||| | |||||| || || || ||||| ||| ||| |
|
|
| T |
5817487 |
agagtagcctgccataaaaaacacagggctacatatatccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttc |
5817586 |
T |
|
| Q |
725 |
ctaatcctctaat |
737 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5817587 |
ctaatcctctaat |
5817599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 150; Significance: 7e-79; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 529 - 761
Target Start/End: Original strand, 40318404 - 40318636
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
40318404 |
caaagcaatgaaaataaaattcaaaccaggattaaagcctgaacctatttacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaacaaag |
40318503 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||||| |||||||||||||||||| | |||||| || ||||||| || ||||||||||||||||| |||||| || ||||||||||| ||||||||||| |
|
|
| T |
40318504 |
tgtagcctgccaagaaagcatagggttgcacatg-ccttaaagaattcaaatcagatatagcatctcttatgcaaaatagatgagtatcaaaatttccta |
40318602 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||| | ||||| ||||||| |
|
|
| T |
40318603 |
atcctctaatcaccatatttgggattacttttga |
40318636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 529 - 761
Target Start/End: Original strand, 15795852 - 15796086
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttaca--aaagagagaaatgaagccaaaggctatcctatagcaacaaaacaa |
626 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
15795852 |
caaagcaatgaaaataaaatgcaaaccatgattaaggtctgaatttgtttacacaaaagagagaaatgaagtcaaaggctttcctatagcaacaaaacaa |
15795951 |
T |
|
| Q |
627 |
agtgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgcaa-ttagatgagtattaaaatttcc |
725 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |
|
|
| T |
15795952 |
agtgtagcctgcca-gaaagcatagggctgcacatgcccctaaagaaatctaatcagatataacatctattatgcaacatagatgagtaacgaaatttcc |
15796050 |
T |
|
| Q |
726 |
taatcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
15796051 |
taatcctctaatcatcatatttgggattgcttttga |
15796086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 530 - 761
Target Start/End: Original strand, 2611739 - 2611971
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagt |
629 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
2611739 |
aaagcaatgaaaatagaatgcaaaccaggattaaggcctgaacctatttacaaaagagggaaaggaagccaaaggctatcctaaagcaacaaaactaaga |
2611838 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaa |
728 |
Q |
| |
|
||||| |||||||||| |||| |||| || ||| || ||||||| |||||||||||||||||||| | | || || |||||| ||| |||||||||||| |
|
|
| T |
2611839 |
gtagcctgccaagaaaacatatggctgcatatgtccttaaagaattctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
2611938 |
T |
|
| Q |
729 |
tcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||| ||||||||||||| | |||||||||||| |
|
|
| T |
2611939 |
tccgctaatcaccatatttgagattgcttttga |
2611971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 623
Target Start/End: Complemental strand, 40716197 - 40716101
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgttt--acaaaagagagaaatgaagccaaaggctatcctatagcaacaaaa |
623 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||||| |||| ||||| |||||| ||| ||||||| |
|
|
| T |
40716197 |
caaagcaatgaaaataaaatgcaaaccaggattaaggcatgaacctatttacacaaaagagagaaaggaaggtaaaggttatcctgtagtaacaaaa |
40716101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 584
Target Start/End: Complemental strand, 10150759 - 10150704
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaa |
584 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
10150759 |
caaagcaatgaaaataaattgcaaactaggattaaggcttgaacctgtttacaaaa |
10150704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 761
Target Start/End: Complemental strand, 40716032 - 40715993
Alignment:
| Q |
722 |
ttcctaatcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
40716032 |
ttcctaatcctctaatcacaatatttaggattgcttttga |
40715993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 1e-77; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 529 - 761
Target Start/End: Original strand, 34466622 - 34466852
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
34466622 |
caaagcaatgaaaataaaatgcaaaccaggattaaagcatgaacctgtttacaaaagagagaaaggaagccaaaggctatcctataacaacaa---aaag |
34466718 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||||| ||| | |||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||| ||||||||||| |
|
|
| T |
34466719 |
tgtagcctgctatgaaagcatagagctgcacatgcccctaaagaaatctaattagatatagcatctgttatgcaaaatagatgagtatcaaaatttccta |
34466818 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| |
|
|
| T |
34466819 |
atcctctaatcaccatatttgggattgcttttga |
34466852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 533 - 655
Target Start/End: Original strand, 51499657 - 51499782
Alignment:
| Q |
533 |
gcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgttt--acaaaagagagaaatgaagccaaaggctatcctatagcaac-aaaacaaagt |
629 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||||| |||||| ||||||||||| || |||| ||||||||| |
|
|
| T |
51499657 |
gcaatgaaaataaaatgcaaaccaggattaaggcctgaatctgtttacacaaaagaaagaaaggaagcctaaggctatcctttatcaacaaaaacaaaga |
51499756 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcatagggct |
655 |
Q |
| |
|
| ||| ||||| |||||| |||||| |
|
|
| T |
51499757 |
ggagcctgccataaaagcaaagggct |
51499782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 623
Target Start/End: Original strand, 3847675 - 3847763
Alignment:
| Q |
537 |
tgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagaga--gaaatgaagccaaaggctatcctatagcaacaaaa |
623 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||| ||||||||||||| ||| |||| |||| | ||||||||||||||||||||||| |
|
|
| T |
3847675 |
tgaaaataaattgcaaactaggattaaggcctgaccctgtttacaaaaaagaaggaaaggaagtctaaggctatcctatagcaacaaaa |
3847763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 620
Target Start/End: Complemental strand, 11536481 - 11536388
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaa--agagagaaatgaagccaaaggctatcctatagcaaca |
620 |
Q |
| |
|
||||||||| |||||||| | ||||||| |||||||||||||||||||||||| | ||| ||||| ||||| |||||| |||| |||||||| |
|
|
| T |
11536481 |
caaagcaataaaaataaattacaaaccatgattaaggcctgaacctgtttacacattagaaagaaaggaagcataaggctttcctttagcaaca |
11536388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 1e-71; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 529 - 761
Target Start/End: Complemental strand, 34484100 - 34483867
Alignment:
| Q |
529 |
caaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaag |
628 |
Q |
| |
|
|||| |||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
34484100 |
caaaacaataaaaataaaatgcaaaccagaattaaggtctgaacctatttacaaaagagagaaaggaagcctaaggctatcctatagcaacaaaacaaag |
34484001 |
T |
|
| Q |
629 |
tgtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatg-caattagatgagtattaaaatttccta |
727 |
Q |
| |
|
|||| ||||||||| ||||||| |||| |||||| | | ||| ||||||||||||||| ||||||||||||| || ||||||||||| |||||||| || |
|
|
| T |
34484000 |
tgtaacatgccaaggaagcataaggctgcacatgtctcaaaaaaaatctaatcagataaagcatctattatgtaaaatagatgagtatcaaaatttcata |
34483901 |
T |
|
| Q |
728 |
atcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
34483900 |
ttcctctaatcaccatatctaggattgcttttga |
34483867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 530 - 761
Target Start/End: Complemental strand, 37370646 - 37370414
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttacaaaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagt |
629 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| ||||| ||| |||||||||||| |||| ||||| |||| |||||||||| ||||||||| |||| |
|
|
| T |
37370646 |
aaagcaatgaaaataaaatgcaaatcagtattaatacctgagcctatttacaaaagagtgaaaggaagctaaagactatcctataacaacaaaactaagt |
37370547 |
T |
|
| Q |
630 |
gtagcatgccaagaaagcatagggctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaa |
728 |
Q |
| |
|
||||| |||||| |||| ||| |||| || ||| ||||| ||||||||||||||||||||||||| | | || || |||||| ||| |||||||||||| |
|
|
| T |
37370546 |
gtagcctgccaataaagaatatggcttcaaatgtccctacagaaatctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttcctaa |
37370447 |
T |
|
| Q |
729 |
tcctctaatcaccatatctaggattgcttttga |
761 |
Q |
| |
|
||||||||||| ||||| | |||||| |||||| |
|
|
| T |
37370446 |
tcctctaatcatcatatttgggattgtttttga |
37370414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 559 - 761
Target Start/End: Complemental strand, 38836390 - 38836186
Alignment:
| Q |
559 |
attaaggcctgaacctgtttaca--aaagagagaaatgaagccaaaggctatcctatagcaacaaaacaaagtgtagcatgccaagaaagcatagggctc |
656 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||| || || |||| | |||||| |
|
|
| T |
38836390 |
attaaggtctgaacctgtttacacaaaagagagaaaggaagccaaaggctatcctatagcaacaaaac---gagtagcctgtcatgaaaacgaagggcta |
38836294 |
T |
|
| Q |
657 |
cacatgcccctaaagaa--atctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcctctaatcaccatatctaggatt |
753 |
Q |
| |
|
|| || |||| |||||| |||||||||| ||| ||| | |||||| || || |||||||| ||| ||||||||||||||||||| |||| | ||||| |
|
|
| T |
38836293 |
catataccccaaaagaattctctaatcagacatatcatatgttatgcaaaatacatgagtatcaaatcttcctaatcctctaatcacaatatttgggatt |
38836194 |
T |
|
| Q |
754 |
gcttttga |
761 |
Q |
| |
|
|||||||| |
|
|
| T |
38836193 |
gcttttga |
38836186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 558 - 761
Target Start/End: Original strand, 49094359 - 49094568
Alignment:
| Q |
558 |
gattaaggcctgaacctgttta--caaaagagagaaatgaagccaaaggctatcctatagcaac-aaaacaaagtgtagcatgccaag-aaagcataggg |
653 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||| ||| ||||||| |||||||||||||| ||||||||| ||| | || || | |||||| | || |
|
|
| T |
49094359 |
gattaaggcttgaacttgtttatacaaaagagagaaaagaaaccaaaggttatcctatagcaacaaaaacaaagagtatcctggcatgaaaagcaaatgg |
49094458 |
T |
|
| Q |
654 |
ctccacatgcccctaaagaaatctaatcagatatagcatctattatgc-aattagatgagtattaaaatttcctaatcctctaatcac-catatctagga |
751 |
Q |
| |
|
|| ||| | ||||||||||| |||| || || |||||| ||||||||| || || ||||||| ||| ||||||||||||||||||| |||| | ||| |
|
|
| T |
49094459 |
ctgcacgtacccctaaagaattctactctgacatagcaactattatgcaaaatatatgagtaccaaaccttcctaatcctctaatcacaaatatttggga |
49094558 |
T |
|
| Q |
752 |
ttgcttttga |
761 |
Q |
| |
|
|||||||||| |
|
|
| T |
49094559 |
ttgcttttga |
49094568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 622
Target Start/End: Complemental strand, 39540617 - 39540534
Alignment:
| Q |
541 |
aataaaatgcaaaccacgattaaggcctgaacctgttt--acaaaagagagaaatgaagccaaaggctatcctatagcaacaaa |
622 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| ||| |||||||| | ||| |||||| |||||||||||||||||||||| |
|
|
| T |
39540617 |
aataaattgcaaaccaggattaaggcctgaacctttttacacaaaagaaataaaggaagcctaaggctatcctatagcaacaaa |
39540534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 530 - 623
Target Start/End: Original strand, 36863586 - 36863681
Alignment:
| Q |
530 |
aaagcaatgaaaataaaatgcaaaccacgattaaggcctgaacctgtttaca--aaagagagaaatgaagccaaaggctatcctatagcaacaaaa |
623 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
36863586 |
aaagcaatggaaataaaatgcaaaccaaaattaaggcctgaacatgtttgcataaaagagagaaaggaagccaaagactatcctatagcaacaaaa |
36863681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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