View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4723-Insertion-7 (Length: 178)
Name: NF4723-Insertion-7
Description: NF4723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4723-Insertion-7 |
 | |
|
| [»] chr2 (1 HSPs) |
| |
|
Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 44704491 - 44704661
Alignment:
| Q |
8 |
gattttagcttcaataatatatgattaccgttgtgttgtagtaggctagtagcatagcaccggtaatagttgacttatgaacagttatactactataaaa |
107 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44704491 |
gattttagcttgaataatatatgattaccgttgtgttgtagtaggctagtagcatagcaccggtaatagttgacttatgaacagttatactactataaaa |
44704590 |
T |
|
| Q |
108 |
caaaatatagttaatgtagactatacacacacacaaatctataaagggatttgttaatttgcaatcactca |
178 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44704591 |
caaaatatagttaatgtaaactatacacacacacaaatctataaagggatttgttaatttgcaatcactca |
44704661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University