View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4723_high_4 (Length: 205)
Name: NF4723_high_4
Description: NF4723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4723_high_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 5607591 - 5607766
Alignment:
| Q |
20 |
taaagtgcttggagatggaactttaaaaaaggctgttgaagcactcctaaatggcatgggctccccctttagaatttatgagaataatttgggaagattg |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5607591 |
taaagtgcttggagatggaactttaaaaaaggctgttgaagcactcctaaatggcatgggctcccccttcagaatttatgagaataatttgggaagattg |
5607690 |
T |
|
| Q |
120 |
gtgtctcctggagaagtgctgactgcttggctgacaaaacctggagttttcaacttgcttgttctggatgatgtcc |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5607691 |
gtgtctcctggagaagtgctgactgcttggttgacaaaacctggagttttcaacttgcttgttctgtctgatgtcc |
5607766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University