View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4724-Insertion-7 (Length: 426)
Name: NF4724-Insertion-7
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4724-Insertion-7 |
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Alignment Details
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 8 - 423
Target Start/End: Complemental strand, 2089345 - 2088939
Alignment:
| Q |
8 |
catgatttatttctagcttcctataaat---ctatcaaaatgcatgaatcatgttttatcagca-aaaaattcatgattaaatttgatttaggattttgg |
103 |
Q |
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|||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |
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| T |
2089345 |
catgatttatttctagcttcctataaataatctatcaaaatg----aattatgttttatcagcacaaaaactcatgattaaatttgatttaggattttgg |
2089250 |
T |
|
| Q |
104 |
aatcttaataatagatttgatcaaggatttcaatttttgcttttgaaaaactcttttggatccatcaaaattacacatacatttgattaattacttatat |
203 |
Q |
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| T |
2089249 |
aatcttaataatagatttgatcaaggatttcaaattttgcttttgaaa--ctcttttggatccatcaaaattacacatacatttgattaattacttatat |
2089152 |
T |
|
| Q |
204 |
ttgtgatttaaaataactaccttaatttatttatttttcctttatagaatccaagacttattcagcggctattcgtgccatgttaaaaggtggttcttga |
303 |
Q |
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|||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
2089151 |
ttgtgatttaaaataactaccttatatttttt--ttttcctttatagaatccaagacttattcagcggctattcgtgccatgctaaaaggtggttcttga |
2089054 |
T |
|
| Q |
304 |
ctaagtgaaaacatgtcgaaaggtaattattgtacatattatatgtgttgtgttgtgttgaccttttagtatagtttcttgtatgtagttgaattggtgg |
403 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
2089053 |
ctaagtgaaaacatgtcgaaaggtaattattgtacatattatatgtggtgtgttgg-----ccttttagtatagtttcttgtatgtagttgaattggtgg |
2088959 |
T |
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| Q |
404 |
catttaacatgtgatcttat |
423 |
Q |
| |
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|||||||||||||||||||| |
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| T |
2088958 |
catttaacatgtgatcttat |
2088939 |
T |
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