View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4724-Insertion-8 (Length: 293)

Name: NF4724-Insertion-8
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4724-Insertion-8
NF4724-Insertion-8
[»] chr7 (1 HSPs)
chr7 (8-293)||(42718756-42719041)


Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 293
Target Start/End: Original strand, 42718756 - 42719041
Alignment:
Q  8 cattgtagccttgagtgatatacagtgttgcttgttttctctttagggatatatttgtctctttcttggtttgaggtgttacttttcttttttccatctt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42718756 cattgtagccttgagtgatatacagtgttgcttgttttctctttagggatatatttgtctctttcttggtttgaggttttacttttcttttttccatctt 42718855  T
Q  108 tgcttaaacattttaccccagtcaaattatatggtaaacgttctttcttcccttttctttctttgcgtgctgtttgtagtttgcatattggtacctacaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42718856 tgcttaaacattttaccccagtcaaattatatggtaaacgttctttcttcccttttctttcattgcgtgctgtttgtagtttgcatattggtacctacaa 42718955  T
Q  208 ctgctacgacagaccataagaaacaggtctgttcacaacagagtaggggaccatggcctgttgacatgcccaaattttttacttga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42718956 ctgctacgacagaccataagaaacaggtctgttcacaacagagtaggggaccatggcctgttgacatgcccaaattttttacttga 42719041  T

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