View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4724_high_11 (Length: 244)
Name: NF4724_high_11
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4724_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18140315 - 18140541
Alignment:
| Q |
1 |
caagcatagatgtagagtttgcaatggtctatgccgcaatagagcagtcatgacacagttaatgagatcatatgaaaagaaattcaatttaaatgataat |
100 |
Q |
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| T |
18140315 |
caagcatagatgtagagtttgcaatggtctatgccgcaatagagcagtcatgacacagttaatgagatcatatgaaaagaaattcaatttaaatgataat |
18140414 |
T |
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| Q |
101 |
aattaatatgtcgtatttatctatgtannnnnnnnattaagtagtctagtgccgagaatcgcacatgttacgtgtggagaaatgagaattgtaagttcaa |
200 |
Q |
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| T |
18140415 |
aattaatatgtcgtatttatctatgtattttttttattaagtagtctagtgccgagaatcgcacatgttacgtgtggagaaatgagaattgcaagttcaa |
18140514 |
T |
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| Q |
201 |
actcacgccccaacacaacaaatattc |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
18140515 |
actcacgccccaacacaacaaatattc |
18140541 |
T |
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