View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4724_high_16 (Length: 210)
Name: NF4724_high_16
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4724_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36062145 - 36061963
Alignment:
| Q |
14 |
attatacttcagtaaatgtaagaacaattagttaaacattcttaagttcttcactttattaaccttaaagatgcatata----gtatttttatcatgtta |
109 |
Q |
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| T |
36062145 |
attatacttcagtaaatgtaagaacaattagttaaacattcttaagttcttcactttattaaccttaaagatgcatatatatagtatttttatcatgtta |
36062046 |
T |
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| Q |
110 |
caactctgatatatttgataacagaaacagaaatacaagaacatgggttcaaagtagaacaaagatagttctcatgtgcttaa |
192 |
Q |
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| T |
36062045 |
caactctgatatatttgataacagaaacagaaatacaagaacatgggttcaaagtagaacaaagatagttctcatgtgcttaa |
36061963 |
T |
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