View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4724_low_10 (Length: 256)
Name: NF4724_low_10
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4724_low_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 18139891 - 18140135
Alignment:
| Q |
14 |
agagataagttggattgggtcagaacgcgaagtccaacaggtcaaaagtcaacctgactaaaattcattgttttaaactgacacggggcact--gcacgc |
111 |
Q |
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| T |
18139891 |
agagataagttggattgggtcagaacgcgaagtccaacaggtcaaaagtcaacctgactaaaattcattgttttaaactgacacggggcactctgcgcac |
18139990 |
T |
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| Q |
112 |
acaagcaagcaccttgccctaggcacctaggcccctgttccaatcttggtgctcagctcccattgaaaaagtggtcccaatctgtttcaagttctggttt |
211 |
Q |
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| T |
18139991 |
acaagcaagcaccttgccctaggcgcctaggcccctgttccaatcttggtgctcagctcccattgaaaaagtggtcccgatctgtttcaagttctggttt |
18140090 |
T |
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| Q |
212 |
gcctatttgattgatgtactaccttaagttgattcctaagcatcc |
256 |
Q |
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| T |
18140091 |
gcctatttgattgatgtactaccttaagttgattcctaagcatcc |
18140135 |
T |
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