View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4724_low_9 (Length: 290)
Name: NF4724_low_9
Description: NF4724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4724_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 7540153 - 7540424
Alignment:
| Q |
1 |
agatttagtcttcaagcaattgttgccaaaacatctggagtttgatgatgaacagcatgaacaacaaccttttgcaannnnnnnatgaggaaagcaactg |
100 |
Q |
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| T |
7540153 |
agatttagtcttcaagcaattgttgccaaaacatctggagtttgatgatgaacaacatgaacaacaaccttttgcaatttttttatgaggaaagcaactg |
7540252 |
T |
|
| Q |
101 |
taggagcaacatatccatgaaagactaataacaaagnnnnnnnngaagttagctcacattattactacattcaatcctaaatgtaagattatgttgatca |
200 |
Q |
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| T |
7540253 |
taggagcaacatatccatggaagactaataacaaagaaaaaaaa-aagttagctcacattattactacattctatcctaaatgtaagattatgttgatca |
7540351 |
T |
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| Q |
201 |
aatcataaaaactaaaataattgatagtagtactaaatgtgtaacactttttttataatatattcatatcata |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7540352 |
aatcataaaaactaaaataattgatagtagtactaaatgtgtaacactttttttataatatattcatatcata |
7540424 |
T |
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