View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4725-Insertion-3 (Length: 935)

Name: NF4725-Insertion-3
Description: NF4725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4725-Insertion-3
NF4725-Insertion-3
[»] chr4 (28 HSPs)
chr4 (263-935)||(17712673-17713347)
chr4 (263-395)||(13317640-13317770)
chr4 (263-337)||(28709168-28709242)
chr4 (263-337)||(39868328-39868402)
chr4 (263-327)||(17186283-17186347)
chr4 (263-327)||(44546641-44546705)
chr4 (263-337)||(26893349-26893423)
chr4 (263-337)||(52762932-52763006)
chr4 (441-617)||(22322586-22322763)
chr4 (263-338)||(135821-135896)
chr4 (263-327)||(13159699-13159763)
chr4 (572-664)||(28708834-28708926)
chr4 (263-335)||(42396697-42396769)
chr4 (263-327)||(46191195-46191259)
chr4 (263-327)||(22322413-22322477)
chr4 (263-337)||(1463337-1463412)
chr4 (569-619)||(39868049-39868099)
chr4 (263-331)||(14453918-14453986)
chr4 (569-617)||(17185997-17186045)
chr4 (569-617)||(17187609-17187657)
chr4 (263-327)||(24010511-24010575)
chr4 (564-664)||(33501007-33501107)
chr4 (263-327)||(37013918-37013982)
chr4 (263-327)||(55284841-55284905)
chr4 (556-615)||(14454203-14454262)
chr4 (263-318)||(21141947-21142002)
chr4 (581-619)||(44546338-44546376)
chr4 (588-621)||(29537063-29537096)
[»] chr8 (12 HSPs)
chr8 (263-934)||(8304609-8305283)
chr8 (263-924)||(21313215-21313872)
chr8 (263-924)||(9017480-9018144)
chr8 (263-399)||(39143254-39143390)
chr8 (263-337)||(19712735-19712809)
chr8 (263-337)||(29934698-29934772)
chr8 (536-619)||(20877473-20877556)
chr8 (263-327)||(17936355-17936419)
chr8 (263-337)||(1219187-1219261)
chr8 (263-337)||(39919297-39919371)
chr8 (263-354)||(15172800-15172892)
chr8 (263-337)||(15353351-15353425)
[»] chr7 (26 HSPs)
chr7 (263-924)||(32215580-32216237)
chr7 (295-925)||(27293664-27294298)
chr7 (266-924)||(38650713-38651368)
chr7 (19-123)||(23971562-23971666)
chr7 (263-664)||(43655802-43656201)
chr7 (263-414)||(29352658-29352799)
chr7 (263-399)||(21120529-21120662)
chr7 (263-399)||(20398809-20398942)
chr7 (263-370)||(3091954-3092061)
chr7 (263-327)||(22681441-22681505)
chr7 (322-456)||(27267560-27267694)
chr7 (263-327)||(41242163-41242227)
chr7 (322-456)||(27257434-27257566)
chr7 (263-335)||(38889930-38890002)
chr7 (263-354)||(42453623-42453715)
chr7 (267-337)||(13427953-13428023)
chr7 (263-327)||(7566944-7567008)
chr7 (563-619)||(8752194-8752250)
chr7 (132-185)||(23971696-23971755)
chr7 (263-331)||(45140133-45140201)
chr7 (560-619)||(17263121-17263180)
chr7 (263-327)||(6459108-6459171)
chr7 (263-327)||(8752501-8752565)
chr7 (266-337)||(14241299-14241371)
chr7 (263-327)||(22358695-22358758)
chr7 (482-619)||(644743-644881)
[»] chr5 (26 HSPs)
chr5 (263-924)||(17696034-17696691)
chr5 (263-924)||(17945875-17946532)
chr5 (263-821)||(1584992-1585547)
chr5 (263-651)||(15504587-15504973)
chr5 (263-327)||(26397286-26397350)
chr5 (263-337)||(40632648-40632722)
chr5 (263-331)||(21825215-21825284)
chr5 (263-336)||(38099573-38099646)
chr5 (266-337)||(7123934-7124006)
chr5 (263-335)||(13390352-13390424)
chr5 (263-327)||(21269879-21269943)
chr5 (263-327)||(21271893-21271957)
chr5 (263-327)||(23257178-23257242)
chr5 (263-327)||(37268346-37268410)
chr5 (263-492)||(24251147-24251378)
chr5 (266-335)||(18149364-18149433)
chr5 (565-618)||(33651004-33651057)
chr5 (263-335)||(16120013-16120085)
chr5 (263-331)||(23264111-23264179)
chr5 (263-331)||(41211573-41211641)
chr5 (565-617)||(7125312-7125364)
chr5 (569-617)||(26397594-26397642)
chr5 (569-617)||(37268045-37268093)
chr5 (263-326)||(9194543-9194606)
chr5 (263-327)||(20251511-20251575)
chr5 (556-621)||(41211291-41211356)
[»] chr6 (21 HSPs)
chr6 (266-924)||(2854115-2854771)
chr6 (263-333)||(31794673-31794743)
chr6 (536-827)||(29361169-29361460)
chr6 (263-331)||(18489745-18489813)
chr6 (263-331)||(16477626-16477695)
chr6 (263-337)||(31848054-31848128)
chr6 (266-335)||(25026737-25026806)
chr6 (263-327)||(4103083-4103147)
chr6 (263-327)||(14781983-14782047)
chr6 (569-710)||(5675798-5675939)
chr6 (420-615)||(5195283-5195479)
chr6 (263-327)||(5675491-5675555)
chr6 (263-335)||(20210275-20210347)
chr6 (263-335)||(22104298-22104370)
chr6 (264-327)||(12607242-12607304)
chr6 (565-617)||(4103375-4103427)
chr6 (263-337)||(5195553-5195627)
chr6 (263-337)||(25186763-25186838)
chr6 (263-335)||(9756493-9756567)
chr6 (263-337)||(10286076-10286150)
chr6 (560-617)||(9756207-9756264)
[»] chr3 (14 HSPs)
chr3 (263-924)||(12214936-12215597)
chr3 (263-628)||(21477741-21478102)
chr3 (263-468)||(16898517-16898718)
chr3 (263-337)||(7937461-7937535)
chr3 (263-337)||(25280389-25280463)
chr3 (572-680)||(25280706-25280814)
chr3 (263-337)||(7638885-7638960)
chr3 (263-330)||(10773247-10773314)
chr3 (563-617)||(10751969-10752023)
chr3 (263-327)||(29685640-29685704)
chr3 (263-331)||(30045254-30045322)
chr3 (264-327)||(10752250-10752313)
chr3 (565-615)||(19667779-19667829)
chr3 (560-621)||(10772964-10773025)
[»] scaffold0116 (2 HSPs)
scaffold0116 (263-916)||(42189-42841)
scaffold0116 (462-916)||(46307-46761)
[»] chr1 (12 HSPs)
chr1 (263-933)||(16423196-16423864)
chr1 (536-827)||(8304023-8304314)
chr1 (263-331)||(7637638-7637706)
chr1 (263-327)||(20819603-20819667)
chr1 (263-327)||(24509317-24509380)
chr1 (263-337)||(10349539-10349614)
chr1 (263-331)||(44955710-44955778)
chr1 (556-615)||(44955434-44955493)
chr1 (263-337)||(24308277-24308351)
chr1 (797-871)||(34504706-34504779)
chr1 (263-337)||(34505237-34505311)
chr1 (560-621)||(7637927-7637988)
[»] scaffold0267 (1 HSPs)
scaffold0267 (263-544)||(10782-11060)
[»] scaffold0423 (1 HSPs)
scaffold0423 (263-585)||(10015-10335)
[»] chr2 (15 HSPs)
chr2 (263-427)||(39994588-39994749)
chr2 (263-511)||(33006689-33006933)
chr2 (263-395)||(10005195-10005324)
chr2 (263-337)||(3376137-3376211)
chr2 (263-327)||(42184106-42184170)
chr2 (263-327)||(45701188-45701252)
chr2 (263-337)||(30515782-30515856)
chr2 (569-617)||(3375860-3375908)
chr2 (560-612)||(12915497-12915549)
chr2 (569-617)||(45468453-45468501)
chr2 (263-337)||(17607654-17607729)
chr2 (266-335)||(26438353-26438422)
chr2 (302-337)||(11123670-11123705)
chr2 (263-337)||(41647138-41647213)
chr2 (263-327)||(45468150-45468215)
[»] scaffold0074 (1 HSPs)
scaffold0074 (560-619)||(36335-36394)
[»] scaffold1251 (1 HSPs)
scaffold1251 (266-327)||(861-921)
[»] scaffold0153 (1 HSPs)
scaffold0153 (556-629)||(24657-24730)


Alignment Details
Target: chr4 (Bit Score: 549; Significance: 0; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 263 - 935
Target Start/End: Original strand, 17712673 - 17713347
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  17712673 aacaaatcaaaatggaatatattactcagaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctctaatatctgttacaacaccaca 17712772  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
     |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17712773 tcacctaaaaataaagatgccaccacctaaacataaaagacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 17712872  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||| |||||||    
T  17712873 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttaactttttcaacaatatgtaacagatcaataaccgtatcatagaaaac 17712972  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  17712973 acggttgtttctctccttccatattgcccaaacacaagcaagccaaataaccttaaaaaacacgtgagtagatctaggcaaacccgccaagtgagtaaac 17713072  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  17713073 tgaatgtaatggtccttaatagaacctggatgaacaaaagaaaacccaagccagtgacaaagtaagacccagactcttccaaaagattcgcaaccaatga 17713172  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaa 861  Q
    ||||||||| |||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  17713173 agagatgacatgtcatttcggataatccacaccctccaacacacaaattgtcgtttggttgaagaatgagacgacgcaccaaatttgctcttgta-ggaa 17713271  T
Q  862 ttctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgc--cacatcaataaaatc 935  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  17713272 ttctgtcttgtagcaaccgccaagcaaaaggcgacacttttttcggaaccaatttgtgctacacatcaataaaatc 17713347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 263 - 395
Target Start/End: Original strand, 13317640 - 13317770
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||| |  |||||| ||||||| |||||||    
T  13317640 aacaaattaaaatggaatatattactcaagaacagagtgattcaccccacacaaggtgtgttaaaatgatgaattcgctaatatctgttacaacaccaca 13317739  T
Q  363 acacctaaaaatatagatgccaccacctaaaca 395  Q
     |||||||||  | |||||||||||||||||||    
T  13317740 ccacctaaaa--aaagatgccaccacctaaaca 13317770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 28709242 - 28709168
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||| ||||||||||||||||   || |||||||||||||||||| |||||||| ||||||||||    
T  28709242 aacaaatcaaaatgaaatatattactcaaaagaggaatgattcaccccgcacaagatgtgctaacgtgatgaatc 28709168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 39868402 - 39868328
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||||||||||||||||||| || ||||  ||||||| ||||||||||||||||||||||||  ||||||||    
T  39868402 aacaaatcaaaatggaatatattgctgaaaagaagagtgactcaccccgcacaaggtgtgctaaaacgatgaatc 39868328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 17186347 - 17186283
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||| |||||||    
T  17186347 aacaaatcaaaatggaatatattgctcaaaagaagagtgattcatcccgcacaaggtatgctaaa 17186283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 44546705 - 44546641
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| ||||||   | ||||||||||||||||||||||||||||||    
T  44546705 aacaaatcaaaatggaatatattgctcaaaggaaaagtgattcaccccgcacaaggtgtgctaaa 44546641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 26893423 - 26893349
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||||||| |||| |||||||  |  || |||||||| |||||||||||||||||||||||||||    
T  26893423 aacaaatcaaaatggaatgtattgctcaaaagaaaggtaattcaccctgcacaaggtgtgctaaagtgatgaatc 26893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 52763006 - 52762932
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||| ||||||||||||||| |||||||  | ||||||||||| || |||||||||| ||||||||||||||    
T  52763006 aacaaattaaaatggaatatattgctcaaaagtatagtgattcacctcgtacaaggtgtgttaaagtgatgaatc 52762932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 617
Target Start/End: Original strand, 22322586 - 22322763
Alignment:
Q  441 tgtctccaccaatcgtaaaagccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcac-ttttcaacaatgtgtaacggat 539  Q
    |||||||||||||||| ||| ||||| ||||| ||  ||| ||||||||| ||||| | ||| ||||| |||||||| |||||||||||    |  ||||    
T  22322586 tgtctccaccaatcgtgaaaaccaaacgaaattggtacaaaattcgaagagagccataaaaaggaattcaacttcactttttcaacaataccgagaggat 22322685  T
Q  540 caataaccgtatcagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||    ||| |||   |||||||||||| |||| |||||||||| ||||||||| |||||||| ||||    
T  22322686 caataaccgcatttttgaagacataattgtttctctccttccaaattgcccaaatacaagcaagccaaataactttaa 22322763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 135821 - 135896
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaa-agtgatgaatcc 338  Q
    ||||||||||||||||||||||| ||| |||  | |||||||||||||| |||||||||||||| ||||||||||||    
T  135821 aacaaatcaaaatggaatatattgctc-aaacgaaagtgattcaccccgtacaaggtgtgctaagagtgatgaatcc 135896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 13159699 - 13159763
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| ||||||   | ||||||||||||||||||| ||||||||||    
T  13159699 aacaaatcaaaatggaatatattgctcaaacgaaaagtgattcaccccgcacaaagtgtgctaaa 13159763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 572 - 664
Target Start/End: Complemental strand, 28708926 - 28708834
Alignment:
Q  572 ctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactga 664  Q
    |||||| ||||||||||||||  ||||||  | |||||||| |||||| | | ||||||| |||| |||||||||||||| ||||||||||||    
T  28708926 ctctccttccatattgcccaactacaagcctgccaaataacattaaaataaaaatgagtagatcttggcaaacccgccaaatgagtaaactga 28708834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 42396697 - 42396769
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||| ||||||||||||||| |||||||  |  |||||| |||||||||||||| |||||||||||||||    
T  42396697 aacaaattaaaatggaatatattgctcaaaagaaaggtgatttaccccgcacaaggtatgctaaagtgatgaa 42396769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 46191195 - 46191259
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| ||||||   | ||||||||||||||||||| ||||||||||    
T  46191195 aacaaatcaaaatggaatatattgctcaaacgaaaagtgattcaccccgcacaatgtgtgctaaa 46191259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 22322413 - 22322477
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||| |||  |||||| || ||||||||| |||||| |||||||||||||    
T  22322413 aacaaatcaaaatggaataaattgttcaaaagcaaagtgattcatcccgcataaggtgtgctaaa 22322477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 1463412 - 1463337
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||||||| ||| ||| ||||||  || ||| |||||||||||| |||||||||| |||||||||||||    
T  1463412 aacaaatcaaaatggtataaattgctcaaaggcaaagtcattcaccccgcataaggtgtgctaaaagtgatgaatc 1463337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 619
Target Start/End: Complemental strand, 39868099 - 39868049
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    ||||||||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  39868099 tttctctccttccatattgcccatacacaggcaagccaaataaccttaaaa 39868049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 14453918 - 14453986
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| ||||||| |||||||  |  |||| |||||| ||||||||||||| |||||||    
T  14453918 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcaccctgcacaaggtgtgcaaaagtga 14453986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 617
Target Start/End: Complemental strand, 17186045 - 17185997
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  17186045 tttctctccttccatattgcccatacacaggcaagccaaataaccttaa 17185997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 617
Target Start/End: Original strand, 17187609 - 17187657
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  17187609 tttctctccttccatattgcccatacacaggcaagccaaataaccttaa 17187657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 24010575 - 24010511
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||| |||||||||  |||||   |||||||||||||||||||||||  |||||||    
T  24010575 aacaaatcaaaattgaatatattgttcaaatgaagagtgattcaccccgcacaaggcatgctaaa 24010511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 664
Target Start/End: Original strand, 33501007 - 33501107
Alignment:
Q  564 ggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactg 663  Q
    |||| ||||||||  ||||||||||||| |||||||| || ||||| | ||||||||| | ||||| | ||| ||||| ||| ||||| ||| |||||||    
T  33501007 ggttatttctctctttccatattgcccacacacaagccagccaaattaacttaaaaaataaatgagaagatcgaggcatacctgccaaatgaataaactg 33501106  T
Q  664 a 664  Q
    |    
T  33501107 a 33501107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 37013918 - 37013982
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  ||| || |||||||| || ||||| |||||||    
T  37013918 aacaaatcaaaatggaatatattgctcaaaaggagaatggttcaccccacataaggtatgctaaa 37013982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 55284841 - 55284905
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||  |||||||| || ||||  | |||||||||||||||| |||||||||||||    
T  55284841 aacaaatcaaaataaaatatattgctgaaaataatagtgattcaccccgcataaggtgtgctaaa 55284905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 615
Target Start/End: Original strand, 14454203 - 14454262
Alignment:
Q  556 gaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataacctt 615  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||| |  |||||||||||    
T  14454203 gaaaacacagttatttctctccttccagattgcccaaacacaagccaaccaaataacctt 14454262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 21142002 - 21141947
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaagg 318  Q
    ||||||||||||| ||||||||| ||||||    ||||||||||||||||||||||    
T  21142002 aacaaatcaaaatagaatatattgctcaaaccaggagtgattcaccccgcacaagg 21141947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 581 - 619
Target Start/End: Complemental strand, 44546376 - 44546338
Alignment:
Q  581 catattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  44546376 catattgcccatacacaagcaagccaaataaccttaaaa 44546338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 621
Target Start/End: Original strand, 29537063 - 29537096
Alignment:
Q  588 cccaaacacaagcaagtcaaataaccttaaaaaa 621  Q
    |||||||||||||||| |||||||||||||||||    
T  29537063 cccaaacacaagcaaggcaaataaccttaaaaaa 29537096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 485; Significance: 0; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 263 - 934
Target Start/End: Original strand, 8304609 - 8305283
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaa-cagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccac 361  Q
    |||||||||||||||||||||||||| ||||| ||| || ||||||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||     
T  8304609 aacaaatcaaaatggaatatattactaaaaaaacagcgtaattcaccccgcacaaagtgtgctaaagtgatgaatcctctaatatctgttacaacaccat 8304708  T
Q  362 aacacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaag 461  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8304709 agcacctaaaaataaagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaaaaaagggggtgtctccaccaatcgtaaaag 8304808  T
Q  462 ccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaa 560  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||| |    
T  8304809 ccaaaagaaataggctcaacattcgaagatagccagagaaaagaatttaacttaactttttcaacaatatgtaacggatcaataatcgtatcagagaaga 8304908  T
Q  561 cacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaa 660  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  8304909 cacggttgtttctctccttccatattgcccaaacacaagcaagccaaataaccttaaaaaacacgtgagtagatctaggcaaactcgccaagtgagtaaa 8305008  T
Q  661 ctgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatg 760  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  8305009 ctgaatataatgatccttaatagaacctggagaaacaaaagaaaacccaagtcagtgacaaagtaaaacccagactcttccaaaagattcgcatccaatg 8305108  T
Q  761 aagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtaggga 860  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  8305109 aagagatgacctgtcgtttctgataaaccacaccctccaacacacacactgtcgtttggttgaagaatgagacgacacaccaaatttgctcttgta-gga 8305207  T
Q  861 attctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgc--cacatcaataaaat 934  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||    
T  8305208 attatgtcttgtagcatccgccaagcaaaaaacgacacttttttcggaactaatttgtgccacacatcaataaaat 8305283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 263 - 924
Target Start/End: Complemental strand, 21313872 - 21313215
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaa--cagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccacca 360  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||| ||||||||| | ||  || ||||||| |||||    
T  21313872 aacaaatcaaaatggaatatattactcaaaaaaacagaatgattcaccccgtacaaggtgtgctaaaatgatgaatcatctagaatctgttacaacacca 21313773  T
Q  361 caacacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaa 460  Q
    |  |||||||||| ||    ||||||||||||||| ||| | | |||   ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  21313772 cggcacctaaaaaaat----gccaccacctaaacagaaaggtctaaac--acttaaatcacccccatacaaaaaaggggatgtctccaccaatcgtaaaa 21313679  T
Q  461 gccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaa 559  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| |||||| | ||||| |||||| |||||||||| ||||||  ||||    
T  21313678 gccaaaagcaataggctcaatatttgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacagatcaataactgtatcattgaaa 21313579  T
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaa 659  Q
    |||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  21313578 acacagttgtttcgctccttccatattgcccaaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaa 21313479  T
Q  660 actgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaat 759  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| | |||||||  |||||| |||||    
T  21313478 actgactgtaatgatccttagtagaacctggaggaacaaaagaaaacccaagccattgacaaagtaaaacccagacacttccaaaaagttcgcatccaat 21313379  T
Q  760 gaagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtaggg 859  Q
     || |||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||    
T  21313378 aaaaagatgacccgtcgtttcggatagtccacaccctccaacacaaaaattgtcgtttggttgaaggatgagacgacacaccaaatttgctcttgta-gg 21313280  T
Q  860 aattctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  21313279 aattctatcttgaagcaaccgccaagcaaaaagcgacacttttgtcgggaccaatttgtgccaca 21313215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 263 - 924
Target Start/End: Complemental strand, 9018144 - 9017480
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattca-----ccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacacca 357  Q
    ||||||| ||||||||||||||| ||||||| || |||||||||     || |||| |||||||||||||||||||||||   |||||| ||||||| ||    
T  9018144 aacaaattaaaatggaatatattgctcaaaagcaaagtgattcaattcacctcgcataaggtgtgctaaagtgatgaatcacctaatatctgttacaaca 9018045  T
Q  358 ccacaacacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaa---taa--aggggatgtctccaccaa 452  Q
    |||||| |||||| ||   ||||||||||| ||||| |||||  || ||| ||| ||| || | ||||||||||   |||  || |||||||||||||||    
T  9018044 ccacaaaacctaataa---agatgccaccatctaaaaataaagcaccaaa-caaattacatgatacccatacaaagctaaggagtggatgtctccaccaa 9017949  T
Q  453 tcgtaaaagccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtat 551  Q
    |   |||| ||||||| |||||||||||  ||||| |||||||| || |||||||||||||| |||||| |||||||    ||  |||||||||||||||    
T  9017948 t---aaaaaccaaaagcaataggctcaaagttcgaggatagccaaaggaaagaatttaactttactttttcaacaatacagaaatgatcaataaccgtat 9017852  T
Q  552 cagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaa 651  Q
    ||| |||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| | | |  || |||  ||  ||||||||||||||    
T  9017851 cagtgaaaactcggttgtttctctccttccataatgcccaaacacaagcaagccaaataaccttaagataaaagtgtgtaggtcgcggcaaacccgccaa 9017752  T
Q  652 gtgagtaaactgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcg 751  Q
    |||| |||||||   |||||| |||||||  |||||||||||||||||||||||||||||| | ||||||| ||||  | |||| | |||||| ||||||    
T  9017751 gtgaataaactgtgagtaatgatccttaacggaacctggaggaacaaaagaaaacccaagccaatgacaaactaaataccagacacttccaaatgattcg 9017652  T
Q  752 caaccaatgaagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctc 851  Q
    || || |||||||||||| | ||||||||   || |||||| ||||||||||| |||||||| |||||||| ||||   ||||||||||||  |||| ||    
T  9017651 catcctatgaagagatgatccgtcgtttctattagaccacatcctccaacacataaattgtcgtttggttgtagaacatgacgacgcaccaggtttgatc 9017552  T
Q  852 ttgtagggaattctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    | ||| |||||||||||||| || |  |||||| ||||||| || |||||| |||||||||||||||||||||    
T  9017551 tcgta-ggaattctgtcttgaaggagacgccaaacaaaaagtgaaacttttgtcggaaccaatttgtgccaca 9017480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 39143390 - 39143254
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||| || | ||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||   |||||| |||||||  ||||||    
T  39143390 aacaaatcaatataggatatattgctcaaaagcaaagtgattcaccccgcacaaggtgtggtaaagtgatgaatcacctaatatctgttacaataccaca 39143291  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaa 399  Q
    ||||||   |||| ||||||||||| ||||| |||||    
T  39143290 acacctcctaataaagatgccaccatctaaaaataaa 39143254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 19712809 - 19712735
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||||||||||||||||||||||||||||  || || ||||||||||||||| |||||||| ||||||||||    
T  19712809 aacaaatcaaaatggaatatattactcaaaaaaggaatggttcaccccgcacaagatgtgctaacgtgatgaatc 19712735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 29934772 - 29934698
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagag-tgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||||    
T  29934772 aacaaatcaaaatggaatatattgctcaaaag-agaggtgattcaccccgcacaaggtgtgctaacgtgatgaatc 29934698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 536 - 619
Target Start/End: Original strand, 20877473 - 20877556
Alignment:
Q  536 ggatcaataaccgtatcagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    |||||||||||| | || | ||| || ||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||    
T  20877473 ggatcaataaccatttctgtgaagactcggttgtttctctccttccaaattgcccaaacacaagcaagccaaattaccttaaaa 20877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 17936419 - 17936355
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||| |||||||| ||||||   | ||||||||||||||||||||||||||||||    
T  17936419 aacaaatcaaaatgaaatatattgctcaaaggaaaagtgattcaccccgcacaaggtgtgctaaa 17936355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 1219261 - 1219187
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||| ||||||||||||||||    | |||||||||||||||||| |||||||| ||||| ||||    
T  1219261 aacaaatcaaaatgaaatatattactcaaaatagaattgattcaccccgcacaagatgtgctaacgtgataaatc 1219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 39919297 - 39919371
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||| ||||||||||||||||||||||  || |  || |||||||| ||||||||||||||||| |||||||||    
T  39919297 aacaagtcaaaatggaatatattactcaccaaaaaggtaattcaccctgcacaaggtgtgctaaaatgatgaatc 39919371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 354
Target Start/End: Complemental strand, 15172892 - 15172800
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatcctttaatatatgttaca 354  Q
    ||||||| ||||||||||||||| ||||||   |||||||||||||||| ||||  |||||| |||||||||||||   |||||| |||||||    
T  15172892 aacaaattaaaatggaatatatttctcaaacgaagagtgattcaccccgaacaatatgtgctaaaagtgatgaatcacataatatctgttaca 15172800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 15353425 - 15353351
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgt-gctaaagtgatgaatc 337  Q
    |||||||||||||| |||||||  ||||||| | |||||||||| ||||||||||||||  | |||||||||||||    
T  15353425 aacaaatcaaaatgaaatatatg-ctcaaaagcggagtgattcatcccgcacaaggtgtaccaaaagtgatgaatc 15353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 437; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 263 - 924
Target Start/End: Original strand, 32215580 - 32216237
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  32215580 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctctaatatctgttacaacaccaca 32215679  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
     ||||||| || |  |||||||||||||||||| ||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32215680 tcacctaacaaaa--gatgccaccacctaaacaaaaaggaccaaac--acttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 32215775  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    | |||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||||||  ||||||    
T  32215776 cgaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcaacaatatgtaacagatcaataaccgtatcattgaaaac 32215875  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
    ||||||||||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  32215876 acggttgtttcgctccttccatattgcccaaacacaagcaagccatataaccttaaaaaacacatgagtagatctagacaaacccgccaaatgagtaaac 32215975  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || |  |||||||||||||| || ||||    
T  32215976 tgaatgtaatgatccttaatagaacctggaggaacaaaagaaaacccaagccagtgacaaagtaaaacccaaacactaccaaaagattcgcatccgatga 32216075  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaa 861  Q
    |||||||||| ||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||     
T  32216076 agagatgacccgtcgtctcggatagtccacaccctccaacacacaaattgtcgtttggttgaagaatgagacgacgcaccaagtttgctcttgta-ggat 32216174  T
Q  862 ttctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||| ||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  32216175 ttctatcttgaagcagccgccaagcaaaaagcaacacttttgtcggaaccaatttgtgccaca 32216237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 295 - 925
Target Start/End: Complemental strand, 27294298 - 27293664
Alignment:
Q  295 cagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccacaacacctaaa-aatatagatgccaccacctaaa 393  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| |||||| ||||||| ||||| | || ||||| || | |||||||||||||||||    
T  27294298 cagagtgattcaccccacacaaggtgtgctaaaatgatgaatcctctaatatttgttacaacaccatagcatctaaagaaaaaagatgccaccacctaaa 27294199  T
Q  394 cataaatgacgaaaacaacttaaatc---acacccatacaataaaggggatgtctccaccaatcgtaaaagccaaaagaaataggctcaagattcgaaga 490  Q
    || ||| |  ||   |  |   ||||   | | |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  27294198 caaaaaaggggatgtctccaccaatcgtaaaagccatacaaaaaaggggatgtctccaccaatcgtaaaagccaaaagcaataggctcaatattcgaaga 27294099  T
Q  491 tagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaacacggttgtttctctccgtccatattgcc 589  Q
     ||||||||||||||||||||||| |||||| | | ||| ||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||||    
T  27294098 aagccagagaaaagaatttaacttaactttttcgagaatatgtaacggatcaataaccgtatcattgaaaacacggttgtttcgctccttccatattgcc 27293999  T
Q  590 caaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactgaatgtaatggtccttaatagaacctg 689  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  27293998 caaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaaactgaaagtaatgatccttaatagaacctg 27293899  T
Q  690 gaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatgaagagatgacctgtcgtttcggataaacc 789  Q
    ||||||||||||||||||||||| ||||||||||||||||| | || | ||||||| ||||||| |||||||| |||||||| ||||||||||||| |||    
T  27293898 gaggaacaaaagaaaacccaagccagtgacaaagtaaaacccaaacacttccaaaatattcgcatccaatgaatagatgacccgtcgtttcggatagacc 27293799  T
Q  790 acaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaattctgtcttgtagcaaccgccaagcaaa 889  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  27293798 acaccctccaacacatacattgtcgtttggttgaagaatgagacgacacaccaaatttgctcttgta-ggaattctgtcttgaagcaaccgccaagcaaa 27293700  T
Q  890 aagcgacacttttttcggaaccaatttgtgccacat 925  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27293699 aagcgacacttttttcggaaccaatttatgccacat 27293664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 266 - 924
Target Start/End: Complemental strand, 38651368 - 38650713
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccacaaca 365  Q
    ||||||||||||||||||||  |||||| || |||||||||||||||| ||||| |||||||||||||||||   |||| | ||||||| || ||| |||    
T  38651368 aaatcaaaatggaatatattgttcaaaagcatagtgattcaccccgcataaggtatgctaaagtgatgaatcacctaatgtctgttacatcatcacgaca 38651269  T
Q  366 cctaaaaatatagatgccaccac--ctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagcc 463  Q
    |||||||    ||||| || |||  ||||| |||||  ||  |||||| ||| || |||||||||||    || ||||||||||||||||||| |||  |    
T  38651268 cctaaaac---agatgtcatcacaactaaaaataaagcac--aaacaaattacatgacacccatacataggagtggatgtctccaccaatcgtgaaaatc 38651174  T
Q  464 aaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcacttt-tcaacaatgtgtaacggatcaataaccgtatcagagaaaaca 562  Q
    ||||| ||||||| |||  || ||||||||||| |  || ||||||| ||| ||||| ||||||||  | |  ||||||||||||||||  | ||| ||     
T  38651173 aaaagcaataggcacaaagtttgaagatagccataagaaggaatttagctttactttatcaacaatacggagaggatcaataaccgtatttgtgaagact 38651074  T
Q  563 cggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaact 662  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||| |||||| ||| ||| ||| ||| |||  || || |||||||| |||  |||||    
T  38651073 cggttgtttctctccttccatatagcccaaacacacgcaagtcaaacaaccttcaaatacaaatgtgtagatcgcggtaaccccgccaaatgaacaaact 38650974  T
Q  663 gaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatgaa 762  Q
     | ||||||| ||||||||   || ||| ||||||||| | ||||||||| | ||||| ||||||| | | ||   || ||| ||||| |||||||||||    
T  38650973 aagtgtaatgatccttaatgttacatgggggaacaaaatagaacccaagccattgacagagtaaaatccaaaccattctaaacgattcacaaccaatgaa 38650874  T
Q  763 gagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaat 862  Q
    ||||||| | || ||||     ||| | || ||||||| ||| ||| ||||||| | ||||||||   |||| ||||||| ||||| ||| ||| |||||    
T  38650873 gagatgatccgttgtttttatcaaatcgcatcctccaatacataaaatgtcattagattgaagaacacgacgtcgcaccagatttgatctcgta-ggaat 38650775  T
Q  863 tctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    | ||||||| |  |  |||||||||||||| || || ||| ||||||||| |||||||||||    
T  38650774 tttgtcttgaatgaggcgccaagcaaaaagagaaacctttgtcggaaccagtttgtgccaca 38650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 23971562 - 23971666
Alignment:
Q  19 ttgcatgtttgcacgacaactatatgcacgatgaggaacgaatgatttataacccttggatgaatcatgtacagcacttcccttgttgtaatattgtttt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23971562 ttgcatgtttgcacgacaactatatgcacgatgaggaacgaatgatttataacccttggatgaatcatgtacagcactgcccttgttgtaatattgtttt 23971661  T
Q  119 aagac 123  Q
    |||||    
T  23971662 aagac 23971666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 263 - 664
Target Start/End: Complemental strand, 43656201 - 43655802
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||| |||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||| | |||||| || |||| ||||       
T  43656201 aacaaattaaaatggaatatattactcaaaagta-agtgattcatcccgcacaaggtgtgctaaagtgatgaatcatctaatatctgatacaacaccgtg 43656103  T
Q  363 acacctaaaaatatagatgccaccaccta--aacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaa 460  Q
     |||||||  |   |||||||| |||| |  || |||||   | ||||||  ||| || ||||||||||||   || ||||||||||||||||| | |||    
T  43656102 gcacctaatga---agatgccaacaccaagaaaaataaaactc-aaaacacattacatgacacccatacaaaggagtggatgtctccaccaatcatgaaa 43656007  T
Q  461 gccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaa 559  Q
     |||||||  | || | ||   |||||||||||||| || || ||||||||||| |||||| | |||||  | |  ||||||||||||||||| | ||||    
T  43656006 accaaaagctaaagacacatagttcgaagatagccaaaggaaggaatttaactttactttttcgacaatacggagaggatcaataaccgtatctgtgaaa 43655907  T
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaa 659  Q
    || | ||||||||||||| |||| |||||||||||||||||||| ||||||||||| | | | |  |||||| |||||||||| ||| |||| ||| |||    
T  43655906 actcagttgtttctctccttccaaattgcccaaacacaagcaagccaaataacctttagataaaagtgagtagatctaggcaaccccaccaattgaataa 43655807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 263 - 414
Target Start/End: Complemental strand, 29352799 - 29352658
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||  ||| ||||| ||||||||||| || ||||||| ||||||||||||||||||||| |||||| ||||        |||    
T  29352799 aacaaatcaaaatggaatata--acttaaaaagagagtgattcatcctgcacaagatgtgctaaagtgatgaatcctctaatatctgtt--------aca 29352710  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaactt 414  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29352709 acacctaaaaatatagatgtcaccacctaaacataaatgacgaaaacaactt 29352658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 21120662 - 21120529
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |    
T  21120662 aacaaatcaaaatggaatatattgctcaaaagcagtgtgattcatcccgcacaaggtgtgctaaagtgatgaatcctctaatatctgttacaacaccaaa 21120563  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaa 399  Q
     |||||   |||| |||||||||||| ||||||||||    
T  21120562 gcacct---aataaagatgccaccacataaacataaa 21120529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 20398942 - 20398809
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||  |||||||||||| |||||| | |||||| ||||||| |||||||    
T  20398942 aacaaatcaaaatgaaatatattgctcaaaagcagagtgattcaccccgtacaaaatgtgctaaagtggtgaatcatctaatatttgttacaacaccaca 20398843  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaa 399  Q
    ||||||   |||| |||||||||||||||||||||||    
T  20398842 acacct---aataaagatgccaccacctaaacataaa 20398809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 3092061 - 3091954
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||| | ||||||| ||||||| || |||||||||||| ||| ||||||| |||||||||||||||   |||||| ||||||| |||||||    
T  3092061 aacaaatcaaaataggatatattgctcaaaagcaaagtgattcaccctgcataaggtgtactaaagtgatgaatcacctaatatctgttacaacaccaca 3091962  T
Q  363 acacctaa 370  Q
    ||||||||    
T  3091961 acacctaa 3091954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 22681441 - 22681505
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  22681441 aacaaatcaaaatggaatatattgctcaaaagaagagtgattcaccccgcacaaggtgtgctaaa 22681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 322 - 456
Target Start/End: Complemental strand, 27267694 - 27267560
Alignment:
Q  322 gctaaagtgatgaatcctttaatatatgttacaccaccacaacacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaat-ca 420  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||| ||   |||||||||||||||||||||||  ||  |||||| ||| || ||    
T  27267694 gctaaagtgatgaatcctctaatatctgttacaacaccacaacacctaacaa---agatgccaccacctaaacataaagcac-caaacaaattacatgca 27267599  T
Q  421 ---cacccatacaataaaggggatgtctccaccaatcgt 456  Q
       |||||||||||||||| |||||||||||| ||||||    
T  27267598 tgtcacccatacaataaagaggatgtctccacaaatcgt 27267560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 41242163 - 41242227
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||    
T  41242163 aacaaatcaaaatggaatatattactcaaacgaaaagtgattcaccccgcacaaggtgtgctaaa 41242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 322 - 456
Target Start/End: Complemental strand, 27257566 - 27257434
Alignment:
Q  322 gctaaagtgatgaatcctttaatatatgttacaccaccacaacacctaaaaatatagatgccaccacctaa--acataaatgacgaaaacaacttaaatc 419  Q
    |||||||||||||||||| || ||| ||||||| |||||||||||||   |||| ||||||||||||||||  |||||||  ||  |||||| ||| ||     
T  27257566 gctaaagtgatgaatcctctagtatctgttacaacaccacaacacct---aataaagatgccaccacctaaacacataaagcac-caaacaaattacatg 27257471  T
Q  420 acacccatacaataaaggggatgtctccaccaatcgt 456  Q
     |||||||||||||||| |||||||||||| ||||||    
T  27257470 tcacccatacaataaagaggatgtctccacaaatcgt 27257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 38890002 - 38889930
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||| ||||| ||||||||| |||||||  |  ||||||||||||||||||||||| |||||||||||||    
T  38890002 aacaaattaaaatagaatatattgctcaaaagaaaggtgattcaccccgcacaaggtgtactaaagtgatgaa 38889930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 354
Target Start/End: Complemental strand, 42453715 - 42453623
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatcctttaatatatgttaca 354  Q
    ||||||| ||||||||||||||| ||||||   | |||||||||||||||| |||||||||| ||||||||||||| |  ||||| |||||||    
T  42453715 aacaaataaaaatggaatatattgctcaaacgaacagtgattcaccccgcataaggtgtgctaaaagtgatgaatcatacaatatctgttaca 42453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 13427953 - 13428023
Alignment:
Q  267 aatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||| |||||||| |||||||  |  |||||||||||| ||||||||||| ||||||||||||||    
T  13427953 aatcaaaatgaaatatattgctcaaaagaaaggtgattcaccccacacaaggtgtgttaaagtgatgaatc 13428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 7566944 - 7567008
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| ||||||   | | |||||||||||||| |||||||||||||    
T  7566944 aacaaatcaaaatggaatatattgctcaaaggaaaaatgattcaccccgcataaggtgtgctaaa 7567008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 619
Target Start/End: Complemental strand, 8752250 - 8752194
Alignment:
Q  563 cggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    ||||||||||||||  |||| |||||||||||||||||||| ||||| |||||||||    
T  8752250 cggttgtttctctctttccaaattgcccaaacacaagcaagccaaattaccttaaaa 8752194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 23971696 - 23971755
Alignment:
Q  132 aagtaatcaaaagatgtcatttt------tgtttacaaaaatgtgtaattataactttga 185  Q
    |||||||||||||||||||||||      |||||||||||||||||||||||||||||||    
T  23971696 aagtaatcaaaagatgtcatttttgtttttgtttacaaaaatgtgtaattataactttga 23971755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 45140133 - 45140201
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||| ||||||| |||||||  ||||||  |  |||||||||||||||||||||||||||||||||    
T  45140133 aacaaattaaaatgggatatattgttcaaaagaaaggtgattcaccccgcacaaggtgtgctaaagtga 45140201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 560 - 619
Target Start/End: Complemental strand, 17263180 - 17263121
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    |||| ||||||||| ||| |||||||||||||| |||||||||| ||||| |||||||||    
T  17263180 acacagttgtttctatccttccatattgcccaagcacaagcaagccaaatgaccttaaaa 17263121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 6459171 - 6459108
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||| |||||||| |||||||  | |||||||||||| |||||| ||||||||||    
T  6459171 aacaaatcaaaatgaaatatattgctcaaaagaaaagtgattcaccctgcacaa-gtgtgctaaa 6459108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 8752565 - 8752501
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||| | |||||  ||||||| |  |||| |||||||||||||||||||||||||    
T  8752565 aacaaatcaaaatgaattatatagctcaaaagcgaagtgtttcaccccgcacaaggtgtgctaaa 8752501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 14241371 - 14241299
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||| |||||||| || |||   | |||||||||||||||||||| |||||| |||||||||||||    
T  14241371 aaatcaaaatgaaatatattgctaaaacgaaaagtgattcaccccgcacaagatgtgctaaaagtgatgaatc 14241299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 22358695 - 22358758
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||||| || ||  ||||||| || |||||||||||||||| |||||||||||||    
T  22358695 aacaaatcaaaatggattaaatg-ctcaaaagcaaagtgattcaccccgcataaggtgtgctaaa 22358758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 482 - 619
Target Start/End: Complemental strand, 644881 - 644743
Alignment:
Q  482 attcgaagatagccagagaaaagaatttaacttcact-tttcaacaatgtgtaacggatcaataaccgtatcagagaaaacacggttgtttctctccgtc 580  Q
    ||||||||| ||||| | |||||| || | ||||||| ||||||||||    || ||||||||||||| ||    ||||| || ||||||||||||| ||    
T  644881 attcgaagaaagccataaaaaagagttcagcttcactctttcaacaatactgaaaggatcaataaccgcatttttgaaaatacagttgtttctctccttc 644782  T
Q  581 catattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    || |||||| ||  ||||||||| || ||||||||||||    
T  644781 caaattgccaaagtacaagcaagccagataaccttaaaa 644743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 429; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 263 - 924
Target Start/End: Original strand, 17696034 - 17696691
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||| ||||||| |||||||    
T  17696034 aacaaatcaaaatagaatatattactcaaaaacagagtgattcatcccgcacaaggtgtgctaaaatgatgaattctctaatatctgttacaacaccaca 17696133  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||||||| | |  |||||||||||||||| ||| | | |||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17696134 acacctaaaaaaaaa--tgccaccacctaaacaaaaaggtccaaac--acttaaatcacacccatacaaaaaaggggatgtctccaccaatcgtaaaagc 17696229  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||  ||||||    
T  17696230 caaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtatcattgaaaac 17696329  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
     |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||| |||||||||    
T  17696330 gcggttgtttcgctccttccatattgcccaaacacaagcaagccaaataaccttaagaaacacataagtagatctaggcaaacccgccaaatgagtaaac 17696429  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| | || | ||||||||||||||| |||||||    
T  17696430 tgaatgtaatgatccttaatagagcctggaggaacaaaagaaaacccaagccagtgaccaagtaaaacccaaacacttccaaaagattcgcatccaatga 17696529  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaa 861  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  17696530 agagatgacccgtcgtttcggatagtccacaccctccaacacacaaattgtcgtttggttgaagaatgagacgacgcaccaagttttctcttgta-ggaa 17696628  T
Q  862 ttctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  17696629 ttctgtcttgaagcaaccgccaagcaaaaagcgacacttttgtcgggaccaatttgtgccaca 17696691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 263 - 924
Target Start/End: Original strand, 17945875 - 17946532
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  17945875 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaaatgatgaatcctctaatatctgttacaacaccaca 17945974  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||||||| | ||||||||||||||||||| ||| | | |||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17945975 acacctaaaaaaa-agatgccaccacctaaacaaaaaggtccaaac--acttaaatcacacccatacaaaaaaggggatgtctccaccaatcgtaaaagc 17946071  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||||| |  ||||||    
T  17946072 caaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtattattgaaaac 17946171  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
    |||| |||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  17946172 acggctgtttcgctccttccatattgcccaaacacaagcaagccaagtaaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaaac 17946271  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||   ||||||| |||| |  |||||||    
T  17946272 tgaatgtaatgatccttaatagaacctggaggaacaaaagaaaa-ccaagccagtgacaaagtaaaacccagacaattccaaaatattcacctccaatga 17946370  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaa 861  Q
    ||||||||||  |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  17946371 agagatgacccatcgtttcggatagaccacaccctccaacacataaattgtcgtttggttgaagaatgagacgacgcaccaagtttgctcttgta-ggaa 17946469  T
Q  862 ttctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||||||||| | ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  17946470 ttctgtcttgaaacaaccgccaagcaaaaaacgacacttttgtcgggaccaatttgtgccaca 17946532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 294; E-Value: 1e-164
Query Start/End: Original strand, 263 - 821
Target Start/End: Complemental strand, 1585547 - 1584992
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  1585547 aacaaatcaaaattgaatatattgctcaaaagcagagtgattcaccccgtacaaggtgtgctaaagtgatgaatcctctaatatatgttacaacaccaca 1585448  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
     ||||||| ||   |||||||||||||||||||||||  || ||| ||| ||| || ||||||||||||||||||||||||||||||||||||| ||| |    
T  1585447 tcacctaataa---agatgccaccacctaaacataaagcaccaaa-caaattacatgacacccatacaataaaggggatgtctccaccaatcgtgaaaac 1585352  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    |||||| ||| |||||||  |||||||||||||||||||||||||||||||| |||||| ||||||| |  ||| |||||||||||||||||| ||||||    
T  1585351 caaaagcaatgggctcaaagttcgaagatagccagagaaaagaatttaacttaactttttcaacaatattgaacagatcaataaccgtatcagtgaaaac 1585252  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
     ||  ||||||  ||| ||||||||||||||||||||||||| ||||||||||||| | |||  |||||| |||  ||||||||||||||||||||||||    
T  1585251 tcgaatgtttcagtccttccatattgcccaaacacaagcaagccaaataaccttaatatacaagtgagtagatcgtggcaaacccgccaagtgagtaaac 1585152  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    |||  |||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | |||| | ||||||||||||||| || ||||    
T  1585151 tgatagtaatgatccttactagaacctggaggaacaaaagaaaacccaagccagtgacaaagtaaaaaccagacacttccaaaagattcgcatccgatga 1585052  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggtt 821  Q
    |||||||| | ||||||||  |||  ||||||||||||||||| |||||||| |||||||    
T  1585051 agagatgatccgtcgtttctaatagtccacaccctccaacacataaattgtcgtttggtt 1584992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 263 - 651
Target Start/End: Complemental strand, 15504973 - 15504587
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||| | |||||| |||||||  ||||||    
T  15504973 aacaaatcaaaatggaatatattacttaaaaatagagtgattcaccccgcacaaggtgtgttaaaatgatgaatcttctaatatctgttacaataccaca 15504874  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||| ||||||| |  |||||||||||||||||| ||| | | |||   |||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  15504873 acatctaaaaaaa--gatgccaccacctaaacaaaaaggtccaaac--acttaaatcacaaccatacaataaaggggatgtctccaccaatcgtaaaaac 15504778  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcac-ttttcaacaatgtgtaacggatcaataa-ccgtatcagagaaaa 560  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||  |||||    
T  15504777 caaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcaacaatatgtaacggatcaataacccgtatcattgaaaa 15504678  T
Q  561 cacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaa 651  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  15504677 cacggttgtttcgctccttccatattgcccaaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaa 15504587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 26397286 - 26397350
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  26397286 aacaaatcaaaatggaatatattgctcaaaagaagagtgattcaccccgcacaaggtgtgctaaa 26397350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 40632648 - 40632722
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||||  ||||||||    
T  40632648 aacaaatcaaaatgaaatatattgctcaaaagaagagtgattcaccccgcataaggtgtgctaaaacgatgaatc 40632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 21825284 - 21825215
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagag-tgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||||||||||| |||||||  | || ||||||||||||||||||||||||||||||||    
T  21825284 aacaaatcaaaatggaatatattgctcaaaagaaaaggtgattcaccccgcacaaggtgtgctaaagtga 21825215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 38099646 - 38099573
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaa-agtgatgaat 336  Q
    |||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||| ||| ||||||||||    
T  38099646 aacaaatcaaaatggaatatattactcaaaca-aaaatgattcaccccgcacaaggtgtgataagagtgatgaat 38099573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 7123934 - 7124006
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||| |||||||| ||||||| || ||||||||| |||||| |||||||||| |||||||||||||    
T  7123934 aaatcaaaatgaaatatatttctcaaaagcaaagtgattcaacccgcataaggtgtgctaaaagtgatgaatc 7124006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 13390352 - 13390424
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||||||||||||||  |||||||    |||||||||||||||||||| |||||||| ||||||||    
T  13390352 aacaaatcaaaatggaatatatagctcaaaagagaagtgattcaccccgcacaagatgtgctaacgtgatgaa 13390424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 21269879 - 21269943
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||| ||||||||||||||   | ||| ||||||||||||||||||||||||||    
T  21269879 aacaaatcaaaatggtatatattactcaaaccaaaagtaattcaccccgcacaaggtgtgctaaa 21269943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 21271893 - 21271957
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||| ||||||||||||||   | ||| ||||||||||||||||||||||||||    
T  21271893 aacaaatcaaaatggtatatattactcaaaccaaaagtaattcaccccgcacaaggtgtgctaaa 21271957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 23257242 - 23257178
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||||||||||||  |||||   | ||||||||||||||||||||||||||||||    
T  23257242 aacaaatcaaaatggaatatattgttcaaacgaaaagtgattcaccccgcacaaggtgtgctaaa 23257178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 37268410 - 37268346
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| ||||||   | |||||||||||||| |||||||||||||||    
T  37268410 aacaaatcaaaatggaatatattgctcaaaggaaaagtgattcaccccgtacaaggtgtgctaaa 37268346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 492
Target Start/End: Complemental strand, 24251378 - 24251147
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatcctttaatatatgttacaccaccac 361  Q
    |||||| ||||||  ||||||||  |||||| |  ||||||||||||||||||||||||| | |||||||||||||    ||| ||||||||| ||| ||    
T  24251378 aacaaaccaaaataaaatatattgttcaaaagctaagtgattcaccccgcacaaggtgtgttaaaagtgatgaatcacccaatgtatgttacatcacaac 24251279  T
Q  362 aacacctaaaaatatagatgccaccacctaaacata---aatg-acgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgta 457  Q
    ||||||||  ||   || |||  ||||| ||| | |   |||| ||||| |||||||| || ||||||||||||  || ||| |||||||||||||| |     
T  24251278 aacacctatcaa---aggtgcatccaccaaaaaaaaaagaatgaacgaatacaacttacatgacacccatacaaagaatggggtgtctccaccaatcatg 24251182  T
Q  458 aaagccaaaagaaataggctcaagattcgaagata 492  Q
    ||| ||||||||||||||  ||| ||| |||||||    
T  24251181 aaaaccaaaagaaataggaacaacatttgaagata 24251147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 18149364 - 18149433
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||| |||||||| |||||||  |  ||| |||||||||||||||||||||||||||| ||||    
T  18149364 aaatcaaaatgaaatatattgctcaaaagtaaggtggttcaccccgcacaaggtgtgctaaagtggtgaa 18149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 565 - 618
Target Start/End: Complemental strand, 33651057 - 33651004
Alignment:
Q  565 gttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaa 618  Q
    ||||||||||||| |||| |||||||||| |||||||||||| |||||||||||    
T  33651057 gttgtttctctccttccaaattgcccaaatacaagcaagtcagataaccttaaa 33651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 16120085 - 16120013
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||||||  ||||||||||||| |     ||| |||||||||||||||||||||||||||||||||    
T  16120085 aacaaatcaaaatgagatatattactcaatagagtggtgtttcaccccgcacaaggtgtgctaaagtgatgaa 16120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 23264111 - 23264179
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| ||||||| ||||| |    |||| |||||||||||||||||||||||||||||    
T  23264111 aacaaatcaaaatgggatatattgctcaatagagtagtgtttcaccccgcacaaggtgtgctaaagtga 23264179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 41211641 - 41211573
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| |||||||||||||||  |  |||| |||||| ||||||||||||| |||||||    
T  41211641 aacaaatcaaaatgggatatattactcaaaagaaaggtgaatcaccctgcacaaggtgtgcaaaagtga 41211573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 617
Target Start/End: Original strand, 7125312 - 7125364
Alignment:
Q  565 gttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||||||| |||| |||| ||||| ||||||||| |||||||||||||    
T  7125312 gttgtttctctccttccaaattgtccaaatacaagcaagccaaataaccttaa 7125364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 617
Target Start/End: Original strand, 26397594 - 26397642
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  26397594 tttctctccttccatattgcccatacacaggcaagccaaataaccttaa 26397642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 617
Target Start/End: Complemental strand, 37268093 - 37268045
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||  ||||||||||||| ||||||||||| |||||||||||||    
T  37268093 tttctctctttccatattgcccatacacaagcaagccaaataaccttaa 37268045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 9194543 - 9194606
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaa 326  Q
    |||||||||||||| |||||||| ||  |||  ||||||||||| ||||||||||| |||||||    
T  9194543 aacaaatcaaaatgaaatatattgctttaaaggagagtgattcatcccgcacaaggcgtgctaa 9194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 20251511 - 20251575
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaa-acagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| | ||||| | || ||| ||||||| |||||||||||||||||    
T  20251511 aacaaatcaaaatggaatatattgcacaaaagagag-gtgtttcaccctgcacaaggtgtgctaaa 20251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 41211356 - 41211291
Alignment:
Q  556 gaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaa 621  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||  |  ||||||||||| |||||    
T  41211356 gaaaacacagttatttctctccttccagattgcccaaacacaagtcaaccaaataaccttcaaaaa 41211291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 422; Significance: 0; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 266 - 924
Target Start/End: Original strand, 2854115 - 2854771
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccacaaca 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  ||||||| ||||||||||    
T  2854115 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaaatgatgaatcctctaatacctgttacaacaccacaaca 2854214  T
Q  366 cctaaa-aatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagcca 464  Q
    |||||| || | ||||||||||||||||||| ||| | | |||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2854215 cctaaagaaaaaagatgccaccacctaaacaaaaaggtccaaac--acttaaatcacacccatacaaaaaaggggatgtctccaccaatcgtaaaagcca 2854312  T
Q  465 aaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaacac 563  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||||| |  ||||||||    
T  2854313 aaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtattattgaaaacac 2854412  T
Q  564 ggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactg 663  Q
    || |||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  2854413 ggctgtttcgctccttccatattgcccaaacacaagcaagccaagtaaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaaactg 2854512  T
Q  664 aatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatgaag 763  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||   ||||||| |||| |  |||||||||    
T  2854513 aatgtaatgatccttaatagaacctggaggaacaaaagaaaa-ccaagccagtgacaaagtaaaacccagacaattccaaaatattcacctccaatgaag 2854611  T
Q  764 agatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaatt 863  Q
    ||||||||  |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2854612 agatgacccatcgtttcggatagaccacaccctccaacacataaattgtcgtttggttgaagaatgagacgacgcaccaagtttgctcttgta-ggaatt 2854710  T
Q  864 ctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2854711 ctgtcttgaaacaaccgccaagcaaaaaacgacacttttgtcggaaccaatttgtgccaca 2854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 31794673 - 31794743
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatg 333  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  31794673 aacaaatcaaaatggaatatattactcaaaaacagagtaattcaccccgcacaaagtgtgctaaagtgatg 31794743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 536 - 827
Target Start/End: Complemental strand, 29361460 - 29361169
Alignment:
Q  536 ggatcaataaccgtatcagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatc 635  Q
    |||||||||| || ||| | ||| || | ||||||||||||| ||||||||| |||||||||| |||| ||||||||||||| | | |  || ||  |||    
T  29361460 ggatcaataatcgcatctgtgaagactcagttgtttctctccttccatattggccaaacacaaacaagccaaataaccttaagataaaagtgtgtcaatc 29361361  T
Q  636 taggcaaacccgccaagtgagtaaactgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagac 735  Q
    | |||||||||||||| ||| |||||| || ||| || ||   ||| |||||||||  |||||||||||| |||||| | ||||| | || || | | ||    
T  29361360 tcggcaaacccgccaaatgaataaactaaaagtagtgatctaaaatggaacctggacaaacaaaagaaaaaccaagccaatgacagactagaaaccaaac 29361261  T
Q  736 tcgtccaaaagattcgcaaccaatgaagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaa 827  Q
    || || |||  | || || |||| ||||||||||  |||||| ||    |||||||| |||||||||||||  ||||| |||||||||||||    
T  29361260 tcttcaaaataaatcacatccaacgaagagatgatatgtcgtctcaatgaaaccacatcctccaacacacatgttgtcgtttggttgaagaa 29361169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 18489813 - 18489745
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||    
T  18489813 aacaaatcaaaatggaatatattgctcaaaagaaaggtgattcaccccgcacaaggtgtgctaaagtga 18489745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 16477626 - 16477695
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagag-tgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||||||||||| |||||||  | || ||||||||||||||||||||||||||||||||    
T  16477626 aacaaatcaaaatggaatatattgctcaaaagaaaaggtgattcaccccgcacaaggtgtgctaaagtga 16477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 31848054 - 31848128
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||||||||||| ||  ||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  31848054 aacaaatcaaaatggaataaatg-ctcaaaagcaaagtgattcaccccgcacaaggtgtgctaaaagtgatgaatc 31848128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 25026737 - 25026806
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||||||||||||||||||||    ||| |||||||||||| || ||||||||||||||||||    
T  25026737 aaatcaaaatggaatatattactcaaaagagaagtaattcaccccgcataaagtgtgctaaagtgatgaa 25026806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 4103083 - 4103147
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||| ||||||||||||||||| |||||||  | ||||||||||||||||||||| ||||||||    
T  4103083 aacaagtcaaaatggaatatattgctcaaaatgaaagtgattcaccccgcacaaggcgtgctaaa 4103147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 14781983 - 14782047
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||   ||| |||||||||| ||||||||||||||||    
T  14781983 aacaaatcaaaatggaatatattgctcaaaagaggagagattcaccccacacaaggtgtgctaaa 14782047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 569 - 710
Target Start/End: Original strand, 5675798 - 5675939
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactgaatgt 668  Q
    ||||||||| ||||||||||||| ||||| ||||| ||||||||||||| | | | ||||| |  ||  |||| ||||||||| ||||||||||||  ||    
T  5675798 tttctctccttccatattgcccatacacaggcaagccaaataaccttaagataaaaatgagaagctcgtggcatacccgccaaatgagtaaactgatagt 5675897  T
Q  669 aatggtccttaatagaacctggaggaacaaaagaaaacccaa 710  Q
    | || |||  ||  ||||||||| ||||| ||||||| ||||    
T  5675898 agtgatccacaaccgaacctggaagaacataagaaaaaccaa 5675939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 615
Target Start/End: Complemental strand, 5195479 - 5195283
Alignment:
Q  420 acacccatacaataaaggggatgtctccaccaatcgtaaaagccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcact- 518  Q
    ||||||||||||| ||| || | |||||||||||||| ||| ||||| || | |||   || ||||||||| ||||| | |||||| || |||| |||      
T  5195479 acacccatacaatgaagtgggtatctccaccaatcgtgaaaaccaaacgataaaggtataacattcgaagaaagccataaaaaagagttcaactccacac 5195380  T
Q  519 tttcaacaatgtgtaacggatcaataaccgtatcagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataacctt 615  Q
    ||||||||||    || ||||||||||||| ||    ||| | || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||    
T  5195379 tttcaacaatactgaaaggatcaataaccgcatttttgaagatacagttgttcctctccttccaaattgcccaaatacaagcaagccaaataacctt 5195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 5675491 - 5675555
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| | |||||    |||||||||||||||||||||||| |||||    
T  5675491 aacaaatcaaaatggaatatattgcacaaaagagaagtgattcaccccgcacaaggtgtactaaa 5675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 20210347 - 20210275
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||||| |||||||||||||||||   |||   ||||||||||||||| |||||||||||| ||||    
T  20210347 aacaaatcaaaatagaatatattactcaaaataggagaacttcaccccgcacaagatgtgctaaagtggtgaa 20210275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 22104370 - 22104298
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    ||||||||||||| |||||||||||||||||   |||   ||||||||||||||| |||||||||||| ||||    
T  22104370 aacaaatcaaaatagaatatattactcaaaataggagaacttcaccccgcacaagatgtgctaaagtggtgaa 22104298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 12607242 - 12607304
Alignment:
Q  264 acaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||||||| |||  |||||  |||||||||||| ||||||||||||||||||||    
T  12607242 acaaatcaaaatggaataaattgttcaaaggcagagtgattca-cccgcacaaggtgtgctaaa 12607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 565 - 617
Target Start/End: Original strand, 4103375 - 4103427
Alignment:
Q  565 gttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||||||| |||| |||| ||||||||||||||| || ||||||||||    
T  4103375 gttgtttctctccttccaaattgtccaaacacaagcaagccatataaccttaa 4103427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 5195627 - 5195553
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    |||||||||||||| |||||||  ||||||| | || |||| |||||||||||| ||||||| |||||||||||||    
T  5195627 aacaaatcaaaatgaaatatatg-ctcaaaagcggaatgatccaccccgcacaatgtgtgctaaaagtgatgaatc 5195553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 25186763 - 25186838
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||| ||||||||||||||| ||||||     ||| ||||||||||||||||| ||||| |||||||||||||    
T  25186763 aacaaataaaaatggaatatattgctcaaacgatcagtaattcaccccgcacaaggcgtgctaaaagtgatgaatc 25186838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 9756567 - 9756493
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagag-tgattcaccccgcacaaggtgtgct-aaagtgatgaa 335  Q
    ||||||| ||||||||||| ||| ||||||||   || |||||||| |||||||||||||||| |||||||||||    
T  9756567 aacaaattaaaatggaataaattgctcaaaaagtaaggtgattcactccgcacaaggtgtgctaaaagtgatgaa 9756493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 10286150 - 10286076
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||||| |||| |||||||| |||||| |  ||   |||||||||||||||||||||||||  |||||||||    
T  10286150 aacaaatcagaatgaaatatattgctcaaagaaggataaattcaccccgcacaaggtgtgctaatatgatgaatc 10286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 617
Target Start/End: Complemental strand, 9756264 - 9756207
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||||||  |||| |||| |||| ||||| ||||||||| |||||||||||||    
T  9756264 acacggttgttttgctccttccaaattgtccaaatacaagcaagccaaataaccttaa 9756207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 405; Significance: 0; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 263 - 924
Target Start/End: Complemental strand, 12215597 - 12214936
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  12215597 aacaaatcaaagtggaatatattactcaaaa-cagagtgattcaccccgcacaaggtgtgctaaaatgatgaatcctctaatatttgttacaacaccaca 12215499  T
Q  363 acacctaaa-aatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaag 461  Q
     |||||||| || | |||||||||| |||||||||||| |    ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12215498 gcacctaaagaaaaaagatgccaccgcctaaacataaaagttccaaaca-cttaaatcacaccaatacaaaaaaggggatgtctccaccaatcgtaaaag 12215400  T
Q  462 ccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacgg-atcaataaccgtatcagagaaa 559  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| |||||| | ||||| |||||||| ||||||||||||||||  ||||    
T  12215399 ccaaaagcaataggctcaatattcgaagaaagccagggaaaagaatttaacttaactttttcgacaatatgtaacgggatcaataaccgtatcattgaaa 12215300  T
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaa 659  Q
    ||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  12215299 acacggttgtttcgctccttccatattgctcaaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaa 12215200  T
Q  660 actgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaat 759  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| | || | ||||||| ||||||| |||||    
T  12215199 actgaatgtaatgatccttaatagaacctggaggaacaaaagaaaacccaagccagtgacaaagacaaacccaaacacttccaaaatattcgcatccaat 12215100  T
Q  760 gaagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtaggg 859  Q
    ||| |||||||| ||| |||||||||  ||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||||| ||    
T  12215099 gaaaagatgacccgtcatttcggataggccacaccctccaacacataaattgtcgttaggttgaagaatgagacgacgcaccaagtttgctcttgta-gg 12215001  T
Q  860 aattctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgccaca 924  Q
    |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  12215000 aattctgtcttgaagcaactgccaagcaaaaagcgacacttttgtcggaaccaatttgtgccaca 12214936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 263 - 628
Target Start/End: Original strand, 21477741 - 21478102
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  21477741 aacaaatcaaaatggaatatattactcaaagacagagtgattcaccccgcacaaggtgtgctaaaatgatgaatcctctaatatctgttacaacaccaca 21477840  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||||| |   ||||||||||||||||||| ||||| | |||   ||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  21477841 acacctaaaca---agatgccaccacctaaacaaaaatgtccaaa--cacttaaatcacactcatacaataaaggggatgtctccaccaatcgtaaaagt 21477935  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcac-ttttcaacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
     ||||  ||||||||||| ||||||||| || || ||||||||||||||||| || ||||||||||| |||||| ||||||||| ||||| |  ||||||    
T  21477936 aaaaaacaataggctcaatattcgaagaaagtcaaagaaaagaatttaacttaactttttcaacaatatgtaacagatcaataatcgtattattgaaaac 21478035  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatga 628  Q
    ||||||||| | |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21478036 acggttgttccgctccttccatattgcccaaatacaagcaagccaaataaccttaaaaaacacatga 21478102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 263 - 468
Target Start/End: Complemental strand, 16898718 - 16898517
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||||  ||||||| ||||||| || |||||||||| ||||||||  ||||||||||||||||||| | |||||||||||||| |||||||    
T  16898718 aacaaatcaaaatgagatatattgctcaaaagcaaagtgattcactccgcacaaaatgtgctaaagtgatgaatcatctaatatatgttacaacaccaca 16898619  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||   |||| ||||||||| |||| ||||||||  ||  |||||| ||| || ||| ||||||||||||||| ||||||||| ||||||| ||| |    
T  16898618 acacct---aataaagatgccactacctgaacataaagtac-caaacaaattacatgacatccatacaataaagggcatgtctccatcaatcgtgaaaac 16898523  T
Q  463 caaaag 468  Q
    ||||||    
T  16898522 caaaag 16898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 7937535 - 7937461
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||||||| |||| ||||||  ||||||||||| ||| |||||||||||||||||||||||||||    
T  7937535 aacaaatcaaaatggaatctattgctcaaaggcagagtgattccccctgcacaaggtgtgctaaagtgatgaatc 7937461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 25280389 - 25280463
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||||||||||||||||||||   || |||||||||||||||||| |||||||  ||||||||||    
T  25280389 aacaaatcaaaatggaatatattactcaaaagaggaatgattcaccccgcacaagatgtgctagcgtgatgaatc 25280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 572 - 680
Target Start/End: Original strand, 25280706 - 25280814
Alignment:
Q  572 ctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaactgaatgtaat 671  Q
    |||||| ||||||||||||||  ||||||  | |||||||| |||||| | | ||||||| |||| |||||||||||||| |||||||||||| || |||    
T  25280706 ctctccttccatattgcccaactacaagcctgccaaataacattaaaataaaaatgagtagatcttggcaaacccgccaaatgagtaaactgagtgaaat 25280805  T
Q  672 ggtccttaa 680  Q
    | |||||||    
T  25280806 gatccttaa 25280814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 7638885 - 7638960
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||| ||||||| || |||||||||||||    
T  7638885 aacaaatcaaaatggaatatattactcaaacgaaaagtgattcaccccgcataaggtgtactaaaagtgatgaatc 7638960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 10773314 - 10773247
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtg 330  Q
    ||||||||||||||| ||||||| |||||||  |  ||||||||||||||||||||||||||||||||    
T  10773314 aacaaatcaaaatgggatatattgctcaaaagaaaggtgattcaccccgcacaaggtgtgctaaagtg 10773247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 10752023 - 10751969
Alignment:
Q  563 cggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||||||||| || |||||||||||| ||||||||| |||||||| ||||    
T  10752023 cggttgtttctctccttctatattgcccaaagacaagcaagccaaataactttaa 10751969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 29685704 - 29685640
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||| ||||||||| |||||||  | |||||||||||| ||||||| ||| |||||    
T  29685704 aacaaatcaaaatagaatatattgctcaaaataatagtgattcaccctgcacaagatgtactaaa 29685640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 30045322 - 30045254
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| ||||||| |||||||  |  |||| |||||| ||||||||||||| |||||||    
T  30045322 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcaccctgcacaaggtgtgcaaaagtga 30045254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 10752313 - 10752250
Alignment:
Q  264 acaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||| ||||||||| ||||||   |||| ||||||||||| |||||||||| ||||    
T  10752313 acaaatcaaaatagaatatattgctcaaatgtagagggattcaccccgtacaaggtgtgttaaa 10752250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 565 - 615
Target Start/End: Original strand, 19667779 - 19667829
Alignment:
Q  565 gttgtttctctccgtccatattgcccaaacacaagcaagtcaaataacctt 615  Q
    ||||||||||||| |||| ||| |||||| |||||||| ||||||||||||    
T  19667779 gttgtttctctccttccaaatttcccaaatacaagcaaatcaaataacctt 19667829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 621
Target Start/End: Complemental strand, 10773025 - 10772964
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaa 621  Q
    |||| ||| ||||||||| |||| ||||||||||||||||| |  ||||||||||| |||||    
T  10773025 acacagttatttctctccttccagattgcccaaacacaagccaaccaaataaccttcaaaaa 10772964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 384; Significance: 0; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 263 - 916
Target Start/End: Original strand, 42189 - 42841
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||| |||||||    
T  42189 aacaaatcaaaatgaaatttattactcaaaaacaaagtgattcaccccgcacaagatgtgctaaaatgatgaatcctctaatatctgttacaacaccaca 42288  T
Q  363 acacctaaa-aatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaag 461  Q
    ||||||||| || | ||||||||||||||||||||||| |    ||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||     
T  42289 acacctaaagaaaaaagatgccaccacctaaacataaaagttccaaaca-cttaaatcacacccatacaaaaaaggggatgtctccaccaatca-aaaac 42386  T
Q  462 ccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaa 560  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||  |||||    
T  42387 ccaaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtatcattgaaaa 42486  T
Q  561 cacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaa 660  Q
    || ||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  42487 catggttgtttcgctccttccatattacccaaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaaa 42586  T
Q  661 ctgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatg 760  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || | ||||||| ||||||| |||| |    
T  42587 ctgactgtaatgatccttaatagaacctggaggaacaaaagaaaacccaagccagtgacaaagtaaaacccaaacacttccaaaatattcgcatccaagg 42686  T
Q  761 aagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtaggga 860  Q
    || ||||| || ||||||| |||||  ||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||| |||||  ||    
T  42687 aaaagatgccccgtcgtttaggatagcccacaccctccaacacataaattgtcgttaggttgaagaatgagacgacgcaccaagtttgctgttgta-aga 42785  T
Q  861 attctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaattt 916  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  42786 attctgtcttgaagcaaccgccaagcaaaaagtgacacttttgtcggaaccaattt 42841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 462 - 916
Target Start/End: Original strand, 46307 - 46761
Alignment:
Q  462 ccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaa 560  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||  |||||    
T  46307 ccaaaagcaataggctcaatattcgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtatcattgaaaa 46406  T
Q  561 cacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaa 660  Q
    || ||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  46407 catggttgtttcgctccttccatattacccaaacacaagcaagccaaataaccttaaaaaacacatgagtagatctaggcaaacccgccaaatgagtaaa 46506  T
Q  661 ctgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatg 760  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || | ||||||| ||||||| |||| |    
T  46507 ctgactgtaatgatccttaatagaacctggaggaacaaaagaaaacccaagccagtgacaaagtaaaacccaaacacttccaaaatattcgcatccaagg 46606  T
Q  761 aagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtaggga 860  Q
    || ||||| || ||||||| |||||  ||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||| |||||  ||    
T  46607 aaaagatgccccgtcgtttaggatagcccacaccctccaacacataaattgtcgttaggttgaagaatgagacgacgcaccaagtttgctgttgta-aga 46705  T
Q  861 attctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaattt 916  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  46706 attctgtcttgaagcaaccgccaagcaaaaagtgacacttttgtcggaaccaattt 46761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 263 - 933
Target Start/End: Original strand, 16423196 - 16423864
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    ||||||||||||| | ||||||| ||||||| || || |||||||||||||||||||||  |||| ||||||| |   |||||| ||||||| |||||||    
T  16423196 aacaaatcaaaataggatatattgctcaaaatcaaagcgattcaccccgcacaaggtgttttaaactgatgaaacacgtaatatctgttacaacaccaca 16423295  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
     ||||||| ||   |||||||||| |||||| |||||  || ||| ||| ||| || |||||||||||| |||| ||||||||||||| ||||| |||      
T  16423296 tcacctaataa---agatgccaccgcctaaaaataaagcaccaaa-caaattacatgacacccatacaaaaaagtggatgtctccaccgatcgtgaaaat 16423391  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcactttt-caacaatgtgtaacggatcaataaccgtatcagagaaaac 561  Q
    |||||| |||||||||||  |||||||||||||  || |||||||||||||| |||||| ||||||| || ||  |||||||||||||||||| ||||||    
T  16423392 caaaagcaataggctcaaagttcgaagatagccgtaggaaagaatttaactttactttttcaacaatatggaaatgatcaataaccgtatcagtgaaaac 16423491  T
Q  562 acggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatctaggcaaacccgccaagtgagtaaac 661  Q
     |||||||||| | || ||||||||||||||||||||||||| ||||||||||||| | |||  |||||| |||  |||||||||||||| ||| |||||    
T  16423492 tcggttgtttcgcaccttccatattgcccaaacacaagcaagccaaataaccttaagatacaagtgagtagatcgtggcaaacccgccaaatgaataaac 16423591  T
Q  662 tgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagactcgtccaaaagattcgcaaccaatga 761  Q
    |||  |||||| |||||| | ||||||||||||||||| ||||||||||||  |||||||||||||||| |||| | ||||| ||||||||| || ||||    
T  16423592 tgatagtaatgatccttattggaacctggaggaacaaaggaaaacccaagcctgtgacaaagtaaaacccagacacttccaacagattcgcatcctatga 16423691  T
Q  762 agagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaa 861  Q
    |||||||||   |||||||   || |||||| ||||||||||| ||||| || |||||||||||| |  || |||||||||  ||  |||||||| ||||    
T  16423692 agagatgactcatcgtttctattagaccacatcctccaacacataaattttcgtttggttgaagagtttgatgacgcaccaggttgactcttgta-ggaa 16423790  T
Q  862 ttctgtcttgtagcaaccgccaagcaaaaagcgacacttttttcggaaccaatttgtgcc--acatcaataaaa 933  Q
    ||||||||||||| | ||||||| |||||||||| ||||||  |||||||||||||||||  ||||||||||||    
T  16423791 ttctgtcttgtaggagccgccaaacaaaaagcgaaacttttggcggaaccaatttgtgccatacatcaataaaa 16423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 536 - 827
Target Start/End: Original strand, 8304023 - 8304314
Alignment:
Q  536 ggatcaataaccgtatcagagaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgagtacatc 635  Q
    ||||| ||||||||||| | |||||| | ||||| ||||||| | || |||||||||||||||||||| ||||| ||||| | | | |  |||||| ||     
T  8304023 ggatcgataaccgtatctgtgaaaactcagttgtatctctccttgcaaattgcccaaacacaagcaagccaaatgacctttagataaaagtgagtagatt 8304122  T
Q  636 taggcaaacccgccaagtgagtaaactgaatgtaatggtccttaatagaacctggaggaacaaaagaaaacccaagctagtgacaaagtaaaacctagac 735  Q
    | ||||| |||||||| ||||||||||||  |||||| || |||||| |||||||||  ||||||||||  |||||| | ||||| | ||||| | | ||    
T  8304123 tcggcaaccccgccaattgagtaaactgagagtaatgatctttaatataacctggagatacaaaagaaacgccaagccaatgacatactaaaaaccacac 8304222  T
Q  736 tcgtccaaaagattcgcaaccaatgaagagatgacctgtcgtttcggataaaccacaccctccaacacacaaattgtcatttggttgaagaa 827  Q
     | |||||||||||| || || ||||| |||||| | ||||||||   ||| ||||   || ||||||| ||||| || |||||||||||||    
T  8304223 acttccaaaagattcacatcctatgaaaagatgaaccgtcgtttctattaacccacgtgcttcaacacataaattttcgtttggttgaagaa 8304314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 7637638 - 7637706
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| ||||||| |||||||  |  |||||||||||||||||||||||||||||||||    
T  7637638 aacaaatcaaaatgggatatattgctcaaaagaaaggtgattcaccccgcacaaggtgtgctaaagtga 7637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 20819603 - 20819667
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||| |||||||||||||||||    
T  20819603 aacaaatcaaaatggaatatattgctcaaaagaaaagtgattcacccagcacaaggtgtgctaaa 20819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 24509317 - 24509380
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  24509317 aacaaatcaaaatggaatatattgctcaaaagaagagtgattca-cccgcacaaggtgtgctaaa 24509380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 10349614 - 10349539
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||||||||||||||||||| ||||||   | |||||||||||| |||||||||||||| |||||||||||||    
T  10349614 aacaaatcaaaatggaatatattgctcaaactgaaagtgattcaccctgcacaaggtgtgctaaaagtgatgaatc 10349539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 44955778 - 44955710
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtga 331  Q
    ||||||||||||||| ||||||| |||||||| |  |||| |||||| ||||||||||||| |||||||    
T  44955778 aacaaatcaaaatgggatatattgctcaaaaaaaaggtgaatcaccctgcacaaggtgtgcaaaagtga 44955710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 615
Target Start/End: Complemental strand, 44955493 - 44955434
Alignment:
Q  556 gaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataacctt 615  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||| |  |||||||||||    
T  44955493 gaaaacacagttatttctctccttccagattgcccaaacacaagccaaccaaataacctt 44955434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 24308277 - 24308351
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||| |||||||| |||||| |  ||   |||||||||||||||||||| ||||| || ||||||    
T  24308277 aacaaatcaaaatgaaatatattgctcaaagaaggataaattcaccccgcacaaggtgtactaaaatggtgaatc 24308351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 797 - 871
Target Start/End: Complemental strand, 34504779 - 34504706
Alignment:
Q  797 ccaacacacaaattgtcatttggttgaagaatgagacgacgcaccaaatttgctcttgtagggaattctgtcttg 871  Q
    |||| ||||||||| ||||| ||||||||||   |||  ||||||||||||||||||||  ||||||||||||||    
T  34504779 ccaagacacaaattttcattcggttgaagaacatgacaccgcaccaaatttgctcttgt-cggaattctgtcttg 34504706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 34505311 - 34505237
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||| |||||||||||||| ||| |||||| | |||   |||||||||||| ||||||||||||| || ||||||    
T  34505311 aacacatcaaaatggaatacattgctcaaagaaagataaattcaccccgcataaggtgtgctaaaatggtgaatc 34505237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 560 - 621
Target Start/End: Original strand, 7637927 - 7637988
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaa 621  Q
    |||| ||| ||||||||| |||| ||||||||||||||||| |  ||||||||||| |||||    
T  7637927 acacagttatttctctccttccagattgcccaaacacaagccaaccaaataaccttcaaaaa 7637988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 176; Significance: 3e-94; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 263 - 544
Target Start/End: Complemental strand, 11060 - 10782
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||    
T  11060 aacaaatcaaaatggaatatattactcaaaaagagagtgattcaccccgcacaaggtgtgttaaagtgatgaatcctctaatatctgttacaacaccaca 10961  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||||||| | ||||||||||||||||||| ||| | | |||   ||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  10960 acacctaaaaa-aaagatgccaccacctaaacaaaaaggtccaaa--cacttaaatcacacacatacaataaaggggatgtct-caccaatcgtaaaagc 10865  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcac-ttttcaacaatgtgtaacggatcaata 544  Q
    |||||| ||||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||| |||||||||||||||    
T  10864 caaaagcaataggctcaatattcgaagaaagccagagaaaaaaatttaacttaactttttcaacaatatgtaacggatcaata 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 263 - 585
Target Start/End: Original strand, 10015 - 10335
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaa-cagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccac 361  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| | ||  |  ||||||| ||||||    
T  10015 aacaaatcaaaatggaatatattactcaaaaaacagaatgattcaccccgcacaaggtgtgctaaaatgatgaatcatctagaaactgttacaacaccac 10114  T
Q  362 aacacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaag 461  Q
      |||||||||| | |  |||||||||||||||| ||| | | |||   ||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  10115 ggcacctaaaaaaaaa--tgccaccacctaaacagaaaggtctaaac--acttaaatcacccccataaaaaaaaggggatgtctccaccaatcgtaaaag 10210  T
Q  462 ccaaaagaaataggctcaagattcgaagatagccagagaaaagaatttaacttcac-ttttcaacaatgtgtaacggatcaataaccgtatcagagaaaa 560  Q
    ||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||  |||||    
T  10211 ccaaaagcaataggctcaatatttgaagaaagccagagaaaagaatttaacttaactttttcgacaatatgtaacggatcaataaccgtatcattgaaaa 10310  T
Q  561 cacggttgtttctctccgtccatat 585  Q
    ||| ||||||||  ||| |||||||    
T  10311 cacagttgtttcgttccttccatat 10335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 3e-38; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 263 - 427
Target Start/End: Complemental strand, 39994749 - 39994588
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||| || || |    
T  39994749 aacaaatcaaaatggaatatattactcaaaaatatagtgattcaccccgtacaaggtgtgctaaaatgatgaatcctctaatatctgttacaacatcaaa 39994650  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccat 427  Q
     |||||||||  | ||||| ||||||||||||| ||| | | ||||| |||||||||||||||||    
T  39994649 gcacctaaaa--aaagatgtcaccacctaaacaaaaaggtccaaaac-acttaaatcacacccat 39994588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 263 - 511
Target Start/End: Original strand, 33006689 - 33006933
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||||||  ||||||||||||||||  | ||||||||||| || ||||||||| |||||||||||||||   |||||| | ||||| ||||||     
T  33006689 aacaaatcaaaataaaatatattactcaaaagtaaagtgattcacctcgtacaaggtgtcctaaagtgatgaatcacctaatatctcttacaacaccacg 33006788  T
Q  363 acacctaaaaatatagatgccaccacctaaacataaatgacgaaaacaacttaaatcacacccatacaataaaggggatgtctccaccaatcgtaaaagc 462  Q
    ||||||   |||| ||||||||||||||||| ||||| |    |||||| ||| ||  |||||||||||   || ||||||||||||||||||| ||| |    
T  33006789 acacct---aataaagatgccaccacctaaaaataaa-gtatcaaacaatttacatgccacccatacaaaggagtggatgtctccaccaatcgtgaaaac 33006884  T
Q  463 caaaagaaataggctcaagattcgaagatagccagagaaaagaatttaa 511  Q
    |||||  |||||||||||  |||||||| ||||| | | ||||||||||    
T  33006885 caaaaacaataggctcaaagttcgaagaaagccataaataagaatttaa 33006933  T

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Target: chr2; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 263 - 395
Target Start/End: Complemental strand, 10005324 - 10005195
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatcctttaatatatgttacaccaccaca 362  Q
    |||||||||| ||| ||||||||  |||||  |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |    
T  10005324 aacaaatcaatatgaaatatattgttcaaaggcagagttattcaccccgcacaaggtgtgctaaagtgatgaatcctctaatatctgttacaacaccaga 10005225  T
Q  363 acacctaaaaatatagatgccaccacctaaaca 395  Q
     |||||   |||| ||||| |||||||||||||    
T  10005224 gcacct---aataaagatgtcaccacctaaaca 10005195  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 3376211 - 3376137
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||    
T  3376211 aacaaatcaaaatagaatatattactcaaaagaagagtgattcaccccgcacaaggtgtgctaaaacgatgaatc 3376137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 42184170 - 42184106
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||| ||||||||||||||||||||   | |||||||||||||||||||| |||||||||    
T  42184170 aacaaatcataatggaatatattactcaaaccaacagtgattcaccccgcacaagatgtgctaaa 42184106  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 45701188 - 45701252
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    ||||||||||||||||||||||| || ||||  | |||||||||||| |||||||||||||||||    
T  45701188 aacaaatcaaaatggaatatattgcttaaaagaaaagtgattcacccagcacaaggtgtgctaaa 45701252  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 30515782 - 30515856
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    |||||||||||||| |||||||  ||||||| | ||||||||||||||||||||||||| || |||||||||||||    
T  30515782 aacaaatcaaaatgtaatatatg-ctcaaaagcggagtgattcaccccgcacaaggtgtactaaaagtgatgaatc 30515856  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 617
Target Start/End: Complemental strand, 3375908 - 3375860
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  3375908 tttctctccttccatattgcccatacacaggcaagtcaaataaccttaa 3375860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 612
Target Start/End: Complemental strand, 12915549 - 12915497
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataac 612  Q
    |||||||||||||| ||  |||||||||||||||||||| |||||||||||||    
T  12915549 acacggttgtttctatcattccatattgcccaaacacaaacaagtcaaataac 12915497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 617
Target Start/End: Original strand, 45468453 - 45468501
Alignment:
Q  569 tttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaa 617  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  45468453 tttctctccttccatattgcccatacacaagcaagccaaataaccttaa 45468501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 17607729 - 17607654
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||| ||||||||||||||| ||||||   | ||||||||||| ||||||||||||| | |||||||||||||    
T  17607729 aacaaataaaaatggaatatattgctcaaacggacagtgattcacctcgcacaaggtgtgttaaaagtgatgaatc 17607654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 26438422 - 26438353
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaagtgatgaa 335  Q
    |||| ||| |||||||||||  ||||||  |  ||||||||||| |||||||||||||||||||||||||    
T  26438422 aaattaaattggaatatattgttcaaaagaaaggtgattcaccctgcacaaggtgtgctaaagtgatgaa 26438353  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 11123705 - 11123670
Alignment:
Q  302 attcaccccgcacaaggtgtgctaaagtgatgaatc 337  Q
    |||||||||||||||||||||||||| |||||||||    
T  11123705 attcaccccgcacaaggtgtgctaaaatgatgaatc 11123670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 41647138 - 41647213
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgct-aaagtgatgaatc 337  Q
    ||||||| |||||| |||||||||||||||   | |||||||||||  |||||||||||||| |||||| ||||||    
T  41647138 aacaaattaaaatgcaatatattactcaaaccgaaagtgattcaccttgcacaaggtgtgctgaaagtggtgaatc 41647213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 45468150 - 45468215
Alignment:
Q  263 aacaaatcaaaatggaatatattactcaaaaacagagtgattcaccccgca-caaggtgtgctaaa 327  Q
    |||||||||||||||||||||||  ||||||  | |||||||||| |||||  |||||||||||||    
T  45468150 aacaaatcaaaatggaatatattgttcaaaagaaaagtgattcactccgcataaaggtgtgctaaa 45468215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 560 - 619
Target Start/End: Original strand, 36335 - 36394
Alignment:
Q  560 acacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaa 619  Q
    |||||||||||||| ||| |||||||||||||| || ||| ||| |||||||||||||||    
T  36335 acacggttgtttctttccttccatattgcccaaccagaagaaagccaaataaccttaaaa 36394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 861 - 921
Alignment:
Q  266 aaatcaaaatggaatatattactcaaaaacagagtgattcaccccgcacaaggtgtgctaaa 327  Q
    |||||||||||||||||||| ||||||   | ||||||||||||||||||| ||||||||||    
T  861 aaatcaaaatggaatatattgctcaaatgaaaagtgattcaccccgcacaa-gtgtgctaaa 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 24730 - 24657
Alignment:
Q  556 gaaaacacggttgtttctctccgtccatattgcccaaacacaagcaagtcaaataaccttaaaaaacacatgag 629  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||| |  ||||||||||| | ||| |||||||    
T  24730 gaaaacacagttatttctctccttccagattgcccaaacacaagccaaccaaataaccttcataaaaacatgag 24657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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