View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4726-Insertion-4 (Length: 385)
Name: NF4726-Insertion-4
Description: NF4726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4726-Insertion-4 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 8 - 385
Target Start/End: Original strand, 2126282 - 2126662
Alignment:
| Q |
8 |
agtttcatggtacttatacaaggaattagcacttctaac--taacttgttacttgcttcacaagcaaacaaagtagctaaataactttccaattaacaag |
105 |
Q |
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| T |
2126282 |
agtttcatggtacttatacaaggaattagcacttctaacattaacttgttacttgcttcacaagcaaacaaagtagttaaataactttccaattaacaag |
2126381 |
T |
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| Q |
106 |
ctaactaacttaactaacttatgaaatataactactcaccctagtgtgtccaagataaatcttgtaaaccacatcccattctactaacatacctatttct |
205 |
Q |
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| T |
2126382 |
ctaactaacttaactaacttatgaaatataactactcaccctagtgtgtccaagataaatctcgtaaaccacatcccattctactaacatacctatttct |
2126481 |
T |
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| Q |
206 |
tcaactcgtacttccactggaaatagaca-ccttcctaattacttaaagactattattgcaacatatgtcaaattcatgattttgctgtccatccaattt |
304 |
Q |
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| T |
2126482 |
tcaactcgtacttccactggaaatagacacccttcctaattacttaaagactattattgcaacatatgtcaaattcttgattttgctgtccatccaattt |
2126581 |
T |
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| Q |
305 |
gagttatacatattctcttcaacactttatgtcatatgtatatatttcaattgattcgtaaggtcacatcttatccctttc |
385 |
Q |
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| T |
2126582 |
gagttatacatattctcttcaacactttatgtcatatgtatatatttcaattggttcgtaaggtcacatcttatccctttc |
2126662 |
T |
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