View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4727_low_15 (Length: 301)

Name: NF4727_low_15
Description: NF4727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4727_low_15
NF4727_low_15
[»] chr7 (44 HSPs)
chr7 (1-199)||(38643553-38643751)
chr7 (70-199)||(38644628-38644757)
chr7 (86-206)||(12643096-12643216)
chr7 (86-199)||(4227156-4227269)
chr7 (86-206)||(45915792-45915912)
chr7 (62-206)||(47558026-47558170)
chr7 (86-199)||(12644117-12644230)
chr7 (90-199)||(4226128-4226237)
chr7 (102-199)||(12930775-12930872)
chr7 (86-199)||(45914529-45914640)
chr7 (102-199)||(7158234-7158331)
chr7 (102-199)||(12929290-12929387)
chr7 (121-205)||(37284106-37284190)
chr7 (86-199)||(27479990-27480103)
chr7 (121-205)||(37289329-37289413)
chr7 (86-197)||(22661362-22661473)
chr7 (86-204)||(27480731-27480849)
chr7 (58-111)||(32053427-32053480)
chr7 (125-197)||(31695637-31695709)
chr7 (127-206)||(31694467-31694546)
chr7 (90-197)||(40022517-40022623)
chr7 (82-144)||(47559044-47559106)
chr7 (58-111)||(2640462-2640515)
chr7 (58-111)||(23181278-23181331)
chr7 (62-111)||(27396883-27396932)
chr7 (58-111)||(28469292-28469345)
chr7 (58-111)||(40379860-40379913)
chr7 (58-111)||(42731510-42731563)
chr7 (102-205)||(7159213-7159315)
chr7 (102-173)||(19979980-19980050)
chr7 (102-181)||(27558136-27558215)
chr7 (102-173)||(43937923-43937994)
chr7 (65-111)||(6571104-6571150)
chr7 (65-111)||(17102111-17102157)
chr7 (65-111)||(27991830-27991876)
chr7 (65-111)||(30948420-30948466)
chr7 (65-111)||(32680855-32680901)
chr7 (58-111)||(10935885-10935938)
chr7 (58-111)||(42019881-42019934)
chr7 (58-111)||(45010689-45010742)
chr7 (102-206)||(26825626-26825730)
chr7 (135-199)||(26825826-26825890)
chr7 (62-126)||(32688506-32688570)
chr7 (63-111)||(45010893-45010941)
[»] scaffold0347 (2 HSPs)
scaffold0347 (16-199)||(13612-13795)
scaffold0347 (60-199)||(14551-14690)
[»] chr1 (62 HSPs)
chr1 (16-199)||(25064936-25065119)
chr1 (60-207)||(25065916-25066063)
chr1 (86-204)||(13295133-13295251)
chr1 (2-61)||(27998136-27998195)
chr1 (102-197)||(32619389-32619484)
chr1 (86-199)||(46282074-46282187)
chr1 (90-197)||(6345625-6345732)
chr1 (86-197)||(46282777-46282888)
chr1 (130-204)||(13295608-13295682)
chr1 (115-197)||(32622369-32622451)
chr1 (121-199)||(51935218-51935296)
chr1 (86-199)||(49093044-49093157)
chr1 (102-205)||(2828190-2828293)
chr1 (102-197)||(6344260-6344355)
chr1 (86-197)||(50062932-50063043)
chr1 (102-199)||(2829539-2829643)
chr1 (122-197)||(32238704-32238779)
chr1 (102-173)||(10019657-10019728)
chr1 (86-164)||(49093797-49093875)
chr1 (58-111)||(1103552-1103605)
chr1 (58-111)||(6367653-6367706)
chr1 (58-111)||(14879062-14879115)
chr1 (58-111)||(40210654-40210707)
chr1 (58-111)||(46163121-46163174)
chr1 (105-197)||(52563656-52563748)
chr1 (60-123)||(34850351-34850414)
chr1 (102-204)||(1047488-1047590)
chr1 (58-116)||(13245936-13245994)
chr1 (61-123)||(34849090-34849152)
chr1 (58-112)||(37578476-37578530)
chr1 (102-199)||(2953748-2953845)
chr1 (58-111)||(4960631-4960684)
chr1 (70-127)||(10303998-10304055)
chr1 (58-111)||(13914351-13914404)
chr1 (75-128)||(16970836-16970889)
chr1 (58-111)||(17662134-17662187)
chr1 (58-139)||(22103790-22103871)
chr1 (58-111)||(24009825-24009878)
chr1 (58-111)||(42248564-42248617)
chr1 (102-181)||(5926540-5926619)
chr1 (102-181)||(19755689-19755768)
chr1 (65-112)||(31514577-31514624)
chr1 (102-181)||(33347700-33347779)
chr1 (102-181)||(46849942-46850021)
chr1 (102-209)||(49002869-49002976)
chr1 (65-111)||(183482-183528)
chr1 (58-116)||(21444680-21444738)
chr1 (65-111)||(24905427-24905473)
chr1 (65-111)||(25647975-25648021)
chr1 (65-111)||(28011454-28011500)
chr1 (125-199)||(28534820-28534893)
chr1 (65-111)||(33442854-33442900)
chr1 (58-116)||(42267389-42267447)
chr1 (58-111)||(1841550-1841603)
chr1 (102-179)||(29980922-29980999)
chr1 (58-111)||(30711418-30711471)
chr1 (58-111)||(32917351-32917404)
chr1 (58-111)||(34464733-34464786)
chr1 (58-111)||(43758913-43758966)
chr1 (58-111)||(44523420-44523473)
chr1 (86-159)||(50062246-50062319)
chr1 (75-111)||(40772598-40772634)
[»] chr2 (50 HSPs)
chr2 (86-212)||(25623278-25623404)
chr2 (86-199)||(25624417-25624530)
chr2 (102-199)||(24387354-24387451)
chr2 (101-199)||(24388255-24388353)
chr2 (121-199)||(20101773-20101851)
chr2 (86-205)||(29957814-29957933)
chr2 (102-211)||(20982515-20982624)
chr2 (121-204)||(20103163-20103246)
chr2 (86-199)||(20983245-20983358)
chr2 (102-195)||(19620793-19620886)
chr2 (121-199)||(29958566-29958644)
chr2 (58-111)||(2318249-2318302)
chr2 (58-111)||(15848179-15848232)
chr2 (58-111)||(36755184-36755237)
chr2 (58-111)||(37895631-37895684)
chr2 (105-205)||(33881572-33881672)
chr2 (129-197)||(43236509-43236577)
chr2 (122-197)||(33882892-33882967)
chr2 (58-116)||(10840562-10840620)
chr2 (58-116)||(11721374-11721432)
chr2 (102-179)||(9694026-9694103)
chr2 (58-111)||(36382252-36382305)
chr2 (58-111)||(39423606-39423659)
chr2 (58-111)||(44714045-44714098)
chr2 (102-206)||(1150221-1150325)
chr2 (129-197)||(7983837-7983905)
chr2 (102-206)||(16366959-16367063)
chr2 (102-206)||(20911126-20911230)
chr2 (102-181)||(37985011-37985090)
chr2 (102-204)||(1149935-1150037)
chr2 (65-111)||(1696000-1696046)
chr2 (65-111)||(6657969-6658015)
chr2 (64-130)||(6846856-6846922)
chr2 (58-116)||(11689627-11689685)
chr2 (65-111)||(14900743-14900789)
chr2 (65-111)||(16099146-16099192)
chr2 (66-116)||(17266484-17266534)
chr2 (102-204)||(18476905-18477007)
chr2 (65-111)||(33739794-33739840)
chr2 (65-111)||(39498401-39498447)
chr2 (62-139)||(6848022-6848099)
chr2 (129-198)||(7981051-7981120)
chr2 (102-199)||(10446835-10446932)
chr2 (58-111)||(10712814-10712867)
chr2 (70-111)||(11163319-11163360)
chr2 (58-111)||(25892485-25892538)
chr2 (102-203)||(28599426-28599527)
chr2 (102-199)||(32519158-32519255)
chr2 (58-111)||(36479809-36479862)
chr2 (129-197)||(43237747-43237815)
[»] chr3 (50 HSPs)
chr3 (62-199)||(32717065-32717202)
chr3 (62-206)||(29192953-29193097)
chr3 (49-197)||(29192040-29192188)
chr3 (102-199)||(22736690-22736787)
chr3 (84-197)||(37249204-37249317)
chr3 (86-197)||(37249782-37249892)
chr3 (86-199)||(2943916-2944029)
chr3 (86-212)||(48189083-48189209)
chr3 (86-199)||(45279268-45279381)
chr3 (102-197)||(44481953-44482048)
chr3 (86-199)||(2944650-2944763)
chr3 (86-199)||(11026616-11026729)
chr3 (86-166)||(32716285-32716365)
chr3 (86-197)||(45278549-45278660)
chr3 (86-197)||(48188383-48188494)
chr3 (121-197)||(44476054-44476130)
chr3 (102-204)||(1757304-1757406)
chr3 (86-188)||(43105818-43105920)
chr3 (58-111)||(26463882-26463935)
chr3 (86-176)||(1756576-1756666)
chr3 (102-199)||(1741390-1741487)
chr3 (58-111)||(9294242-9294295)
chr3 (58-111)||(33689663-33689716)
chr3 (58-127)||(41988037-41988106)
chr3 (61-111)||(51994173-51994223)
chr3 (100-202)||(55036669-55036771)
chr3 (58-111)||(23458263-23458316)
chr3 (58-111)||(33156278-33156331)
chr3 (58-111)||(40758235-40758288)
chr3 (115-176)||(43105259-43105320)
chr3 (58-111)||(43384374-43384427)
chr3 (100-173)||(46670537-46670610)
chr3 (102-158)||(22735403-22735459)
chr3 (102-173)||(30890236-30890307)
chr3 (61-116)||(44654790-44654845)
chr3 (65-111)||(2796270-2796316)
chr3 (65-111)||(8041707-8041753)
chr3 (65-111)||(10770751-10770797)
chr3 (102-180)||(10998157-10998235)
chr3 (122-164)||(11025975-11026017)
chr3 (58-116)||(20704611-20704669)
chr3 (102-188)||(21255815-21255901)
chr3 (65-111)||(36314558-36314604)
chr3 (65-111)||(48322637-48322683)
chr3 (65-111)||(54466514-54466560)
chr3 (135-188)||(21300340-21300393)
chr3 (66-111)||(40033748-40033793)
chr3 (102-179)||(40256897-40256974)
chr3 (58-111)||(40506071-40506124)
chr3 (102-203)||(55036953-55037054)
[»] chr8 (53 HSPs)
chr8 (203-299)||(39030477-39030573)
chr8 (86-205)||(34213761-34213880)
chr8 (102-204)||(38598962-38599064)
chr8 (102-199)||(1231529-1231626)
chr8 (102-199)||(25288076-25288173)
chr8 (121-212)||(33497635-33497726)
chr8 (102-199)||(1232799-1232894)
chr8 (102-199)||(7393145-7393242)
chr8 (86-199)||(34665773-34665886)
chr8 (102-197)||(4970130-4970225)
chr8 (102-197)||(24377186-24377281)
chr8 (86-204)||(34214512-34214631)
chr8 (118-198)||(33497020-33497100)
chr8 (121-195)||(24379015-24379089)
chr8 (131-204)||(4463455-4463528)
chr8 (125-197)||(29574747-29574819)
chr8 (86-197)||(34666525-34666635)
chr8 (58-111)||(4405944-4405997)
chr8 (58-111)||(16388810-16388863)
chr8 (58-111)||(36928567-36928620)
chr8 (58-110)||(31608797-31608849)
chr8 (127-206)||(29575910-29575989)
chr8 (129-212)||(36574807-36574890)
chr8 (65-111)||(23698535-23698581)
chr8 (102-179)||(9632351-9632428)
chr8 (58-111)||(13186151-13186204)
chr8 (122-199)||(27436566-27436643)
chr8 (102-203)||(27857026-27857127)
chr8 (58-111)||(35756673-35756726)
chr8 (58-111)||(39071767-39071820)
chr8 (58-111)||(40318248-40318301)
chr8 (65-111)||(1425313-1425359)
chr8 (65-111)||(3041716-3041762)
chr8 (102-160)||(7392250-7392308)
chr8 (65-111)||(23663805-23663851)
chr8 (58-116)||(24085860-24085918)
chr8 (65-111)||(36325325-36325371)
chr8 (65-111)||(38845559-38845605)
chr8 (65-111)||(40775910-40775956)
chr8 (65-111)||(44407117-44407163)
chr8 (102-199)||(23424796-23424893)
chr8 (122-199)||(27437539-27437616)
chr8 (102-207)||(29190443-29190548)
chr8 (135-188)||(36623560-36623613)
chr8 (135-188)||(37342989-37343042)
chr8 (70-111)||(38862709-38862750)
chr8 (70-111)||(38955794-38955835)
chr8 (133-210)||(40422475-40422552)
chr8 (102-199)||(41801819-41801916)
chr8 (135-188)||(43866835-43866888)
chr8 (171-203)||(7392219-7392251)
chr8 (60-112)||(30710945-30710997)
chr8 (102-210)||(40525499-40525607)
[»] chr5 (61 HSPs)
chr5 (86-199)||(22870446-22870559)
chr5 (86-195)||(22869612-22869721)
chr5 (102-207)||(14744730-14744835)
chr5 (86-199)||(20856935-20857048)
chr5 (86-197)||(36476770-36476881)
chr5 (86-199)||(20857531-20857644)
chr5 (84-197)||(36477358-36477471)
chr5 (125-199)||(31107934-31108008)
chr5 (86-199)||(20072853-20072966)
chr5 (124-199)||(8654110-8654185)
chr5 (102-197)||(21978017-21978112)
chr5 (102-212)||(21978971-21979082)
chr5 (86-205)||(39181054-39181173)
chr5 (86-199)||(39181780-39181893)
chr5 (86-197)||(16532898-16533009)
chr5 (58-111)||(13962955-13963008)
chr5 (86-199)||(16533609-16533722)
chr5 (86-199)||(20072124-20072237)
chr5 (102-203)||(31108338-31108438)
chr5 (118-197)||(8673774-8673853)
chr5 (102-181)||(21260886-21260965)
chr5 (102-197)||(21972095-21972189)
chr5 (102-164)||(39402148-39402210)
chr5 (102-199)||(25253089-25253186)
chr5 (102-199)||(25316879-25316976)
chr5 (58-111)||(29646646-29646699)
chr5 (58-111)||(32242333-32242386)
chr5 (102-181)||(14745469-14745548)
chr5 (58-116)||(12904840-12904898)
chr5 (102-204)||(32052508-32052610)
chr5 (126-188)||(34404498-34404560)
chr5 (58-111)||(5993980-5994033)
chr5 (58-111)||(8322495-8322548)
chr5 (102-199)||(25253370-25253467)
chr5 (102-199)||(25317161-25317258)
chr5 (58-111)||(35512239-35512292)
chr5 (58-111)||(39453391-39453444)
chr5 (102-206)||(33735597-33735701)
chr5 (67-111)||(35920477-35920521)
chr5 (102-173)||(37945023-37945094)
chr5 (65-111)||(297274-297320)
chr5 (65-111)||(3529133-3529179)
chr5 (65-111)||(6758125-6758171)
chr5 (102-180)||(22024154-22024232)
chr5 (61-111)||(24547412-24547462)
chr5 (65-111)||(41930607-41930653)
chr5 (58-111)||(5024302-5024355)
chr5 (58-111)||(10684030-10684083)
chr5 (58-111)||(11047528-11047581)
chr5 (70-111)||(14194719-14194760)
chr5 (102-199)||(18934716-18934813)
chr5 (58-111)||(19892592-19892645)
chr5 (58-111)||(20840624-20840677)
chr5 (70-111)||(28269684-28269725)
chr5 (70-111)||(28771134-28771175)
chr5 (70-111)||(31482667-31482708)
chr5 (70-111)||(38442159-38442200)
chr5 (70-111)||(38475295-38475336)
chr5 (75-111)||(6150545-6150581)
chr5 (102-202)||(8323056-8323156)
chr5 (102-206)||(22533674-22533778)
[»] chr4 (53 HSPs)
chr4 (86-205)||(23455673-23455792)
chr4 (86-204)||(23454952-23455070)
chr4 (102-199)||(53477080-53477177)
chr4 (84-197)||(38982578-38982691)
chr4 (111-199)||(54591587-54591675)
chr4 (102-201)||(54590144-54590243)
chr4 (102-212)||(55013089-55013198)
chr4 (86-206)||(56556578-56556698)
chr4 (86-205)||(52816407-52816526)
chr4 (86-199)||(38813557-38813670)
chr4 (127-199)||(13336863-13336935)
chr4 (86-206)||(38814311-38814431)
chr4 (86-199)||(56557309-56557422)
chr4 (86-205)||(52815660-52815779)
chr4 (127-197)||(22882352-22882422)
chr4 (127-197)||(22934016-22934086)
chr4 (58-108)||(17356206-17356256)
chr4 (58-111)||(14801827-14801880)
chr4 (58-111)||(34765664-34765717)
chr4 (61-126)||(41583518-41583583)
chr4 (58-112)||(10781768-10781822)
chr4 (58-112)||(16605692-16605746)
chr4 (58-112)||(24349764-24349818)
chr4 (65-111)||(50418928-50418974)
chr4 (132-197)||(9254411-9254476)
chr4 (58-111)||(35028282-35028335)
chr4 (61-126)||(40387543-40387608)
chr4 (59-116)||(52298112-52298169)
chr4 (58-111)||(53701903-53701956)
chr4 (65-112)||(4982986-4983033)
chr4 (102-209)||(12691689-12691796)
chr4 (102-181)||(35730945-35731024)
chr4 (65-111)||(9145026-9145072)
chr4 (65-111)||(13058128-13058174)
chr4 (127-197)||(22881172-22881242)
chr4 (127-197)||(22932836-22932906)
chr4 (65-111)||(23613400-23613446)
chr4 (65-111)||(27934623-27934669)
chr4 (65-111)||(36009104-36009150)
chr4 (65-111)||(42738291-42738337)
chr4 (65-111)||(43155787-43155833)
chr4 (60-122)||(48528552-48528614)
chr4 (65-111)||(49879467-49879513)
chr4 (58-111)||(15507957-15508010)
chr4 (66-111)||(16005929-16005974)
chr4 (135-188)||(22249940-22249993)
chr4 (58-111)||(37976437-37976490)
chr4 (70-111)||(44967334-44967375)
chr4 (58-111)||(52909344-52909397)
chr4 (75-111)||(24711202-24711238)
chr4 (133-209)||(48507732-48507808)
chr4 (60-116)||(48529862-48529918)
chr4 (102-206)||(53559671-53559775)
[»] scaffold0009 (2 HSPs)
scaffold0009 (100-210)||(262439-262549)
scaffold0009 (102-199)||(261004-261101)
[»] chr6 (29 HSPs)
chr6 (86-205)||(14656477-14656596)
chr6 (86-204)||(4116797-4116915)
chr6 (86-204)||(4117531-4117649)
chr6 (102-212)||(33401126-33401236)
chr6 (102-206)||(17784385-17784489)
chr6 (121-196)||(8427384-8427459)
chr6 (86-199)||(33399969-33400082)
chr6 (86-200)||(1661414-1661528)
chr6 (86-204)||(14657193-14657311)
chr6 (105-199)||(8427203-8427297)
chr6 (58-111)||(3059348-3059401)
chr6 (58-116)||(33648749-33648807)
chr6 (58-131)||(1215150-1215223)
chr6 (102-199)||(3299843-3299940)
chr6 (102-199)||(5064338-5064435)
chr6 (58-111)||(12080727-12080780)
chr6 (58-111)||(21627997-21628050)
chr6 (58-111)||(33517625-33517678)
chr6 (102-202)||(5064619-5064719)
chr6 (102-205)||(15819774-15819877)
chr6 (65-111)||(28000645-28000691)
chr6 (65-111)||(30337540-30337586)
chr6 (102-199)||(13480211-13480308)
chr6 (102-199)||(23291747-23291844)
chr6 (102-199)||(30234876-30234973)
chr6 (58-111)||(30725850-30725903)
chr6 (70-111)||(30803952-30803993)
chr6 (58-111)||(33647054-33647107)
chr6 (102-182)||(32337851-32337931)
[»] scaffold1493 (1 HSPs)
scaffold1493 (102-199)||(596-693)
[»] scaffold0018 (1 HSPs)
scaffold0018 (102-199)||(73112-73209)
[»] scaffold0182 (2 HSPs)
scaffold0182 (125-199)||(14400-14474)
scaffold0182 (121-205)||(13131-13215)
[»] scaffold0031 (1 HSPs)
scaffold0031 (58-111)||(69056-69109)
[»] scaffold0005 (1 HSPs)
scaffold0005 (58-111)||(37847-37900)
[»] scaffold0279 (1 HSPs)
scaffold0279 (102-181)||(10874-10953)
[»] scaffold0206 (1 HSPs)
scaffold0206 (102-181)||(10346-10425)
[»] scaffold0020 (1 HSPs)
scaffold0020 (65-112)||(139762-139809)
[»] scaffold0559 (1 HSPs)
scaffold0559 (65-111)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (65-111)||(141854-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (65-111)||(1860-1906)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 38643751 - 38643553
Alignment:
Q  1 gcattggtctgaacaagccaagggtatttttgtcaacacaacccctaatttgctgacttagtgacgtgacagtaattaagtgaggagagggacgaaatct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  38643751 gcattggtctgaacaagccaagggtatttttgtcaacacaacccctaatttgctgaattagtgacgtgacagtaattaagtggggagagggacgaaatct 38643652  T
Q  101 taaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  38643651 taaatgattaatttttacaggagcaaaatgggaggattagtaaggtcaaggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 38643553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 38644628 - 38644757
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacc 169  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||| || ||| |||||||||||||||    
T  38644628 cagtgattaagtggggagagggatgaaatcttaaatgattaatttttacaaggtcaaaatggaaggattaataagcttagggataaaaaatcaaatgacc 38644727  T
Q  170 tataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||| |||||||||||||||||||    
T  38644728 tataattgcaagaatgaaatgcatatttaa 38644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 12643216 - 12643096
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| ||||||| ||||||||| || ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||    
T  12643216 agagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaatggcctataattacagggatg 12643117  T
Q  186 aaatgcatatttaaacctttt 206  Q
    |||||||||||||| ||||||    
T  12643116 aaatgcatatttaagcctttt 12643096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 4227156 - 4227269
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||| |||    
T  4227156 agagggacgaaattttaaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatcaaatggcctataattacagggatg 4227255  T
Q  186 aaatgcatatttaa 199  Q
    ||||||||||||||    
T  4227256 aaatgcatatttaa 4227269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 45915792 - 45915912
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||| ||| |||||||||||||||||||| ||| ||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||| |||    
T  45915792 agagggacggaattttaaatgattaatttttacaggggtaaaataggaggattagtaagcttagggatgaaaaatcaaatggcctataattacagggatg 45915891  T
Q  186 aaatgcatatttaaacctttt 206  Q
    |||||||||||||| ||||||    
T  45915892 aaatgcatatttaagcctttt 45915912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 62 - 206
Target Start/End: Complemental strand, 47558170 - 47558026
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatc 161  Q
    |||||||||||| |||||  | | ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  47558170 tgacgtgacagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaaactcagggatgaaaaatc 47558071  T
Q  162 aaatgacctataattgcaggaatgaaatgcatatttaaacctttt 206  Q
    ||||  |||||||||  ||  ||||||||||||||||| ||||||    
T  47558070 aaatagcctataattaaagagatgaaatgcatatttaagcctttt 47558026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 12644117 - 12644230
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| |||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||||| ||| |||||  ||| |||    
T  12644117 agagggacgaaattttaaatgattaatttttacaggagtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctgtaattatagggatg 12644216  T
Q  186 aaatgcatatttaa 199  Q
    ||||||||||||||    
T  12644217 aaatgcatatttaa 12644230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 199
Target Start/End: Complemental strand, 4226237 - 4226128
Alignment:
Q  90 ggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaat 189  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||| ||||||||| ||||||||| |||| |||||||    
T  4226237 ggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaatggcctataattacagggatgaaat 4226138  T
Q  190 gcatatttaa 199  Q
    ||||||||||    
T  4226137 gcatatttaa 4226128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 12930872 - 12930775
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12930872 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaa 12930775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 45914640 - 45914529
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||| || |||||||||||||||| ||||||||| |||  |||    
T  45914640 agagggacgaaattttaaatgattaatttttaca-gggcaaaatgagag-attagtaagcttagggatgaaaaatcaaatggcctataattacagagatg 45914543  T
Q  186 aaatgcatatttaa 199  Q
    ||||||||||||||    
T  45914542 aaatgcatatttaa 45914529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 7158331 - 7158234
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| |||||| ||||||||||| |||||||||||| |||  |||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  7158331 aaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtagggatgaaatgcatatttaa 7158234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 12929387 - 12929290
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||||||||||  |||||| ||||||| |||||||||||||||||    
T  12929387 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctatatttgcagggatgaaatgcatatttaa 12929290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 37284190 - 37284106
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttt 205  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||| |||||||||| |||||    
T  37284190 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagccttt 37284106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 27480103 - 27479990
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||| ||||||||||||||||||| |||||||||||||  | |||||||||||||| |||    
T  27480103 agagggacgaactttcaaatgattagtaattacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaagcggcctataattgcagggatg 27480004  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  27480003 aaaagcatatttaa 27479990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 37289329 - 37289413
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttt 205  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||| |||||| |||||||||| |||||    
T  37289329 gggcaaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctataattacagggatgaaaagcatatttaagccttt 37289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 22661473 - 22661362
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||  |||||||||||||| | ||||||||| |||| |||    
T  22661473 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctataattacagggatg 22661374  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  22661373 aaaagcatattt 22661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 27480731 - 27480849
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||  |||  |||||||||||||| | ||||||||| |||| |||    
T  27480731 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatg 27480830  T
Q  186 aaatgcatatttaaacctt 204  Q
    |||  ||||||||| ||||    
T  27480831 aaaaacatatttaagcctt 27480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 32053427 - 32053480
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  32053427 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 32053480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 31695637 - 31695709
Alignment:
Q  125 aaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||| |||||||||||| | || |||||||  |||||||||||||| ||||||| |||||||||||||||    
T  31695637 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 31695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 31694546 - 31694467
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctttt 206  Q
    |||||||||||||||||  | || |||||||  |||||||  ||||| ||||||| ||||||||||||||| ||||||||    
T  31694546 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattttaacctttt 31694467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 40022517 - 40022623
Alignment:
Q  90 ggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaat 189  Q
    ||||||| ||| ||||| ||||| ||| ||  | |||||||| |||||||||||| |||| |||||||  |||||||| ||||| ||||||| |||||||    
T  40022517 ggacgaattctcaaatgcttaatatttgcagtgacaaaatggaaggattagtaagatcagggatgaaatttcaaatga-ctatatttgcagggatgaaat 40022615  T
Q  190 gcatattt 197  Q
     |||||||    
T  40022616 acatattt 40022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 47559044 - 47559106
Alignment:
Q  82 gaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaag 144  Q
    ||||||||| || |||| ||||||| |||||||||||| ||  ||||||||||||||||||||    
T  47559044 gaggagaggaacaaaattttaaatggttaatttttacagggagaaaatgggaggattagtaag 47559106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 2640462 - 2640515
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| |||||| |||||||| ||||||||||||    
T  2640462 ttagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 2640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 23181278 - 23181331
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| ||||||||  |||||||||||||| ||||||||||||    
T  23181278 ttagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaa 23181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 27396883 - 27396932
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  27396883 tgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 28469292 - 28469345
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||  ||| |||||||| ||||||||||||||| ||||||||||||    
T  28469292 ttagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 28469345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 40379913 - 40379860
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| || | |||||||| ||||||||||||||| ||||||||||||    
T  40379913 ttagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaa 40379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 42731563 - 42731510
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  42731563 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 42731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 7159213 - 7159315
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||| |||||||||||||||||||  ||||  | ||||| |||||||| ||||| ||||||| |||||   ||||||||| |    
T  7159213 aaatgattaatatttgca-gggtaaaatgggaggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaatgacatatttaagc 7159311  T
Q  202 cttt 205  Q
    ||||    
T  7159312 cttt 7159315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 19980050 - 19979980
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||| ||| ||| |||||||||| | |||||||||  |||| |||||||| ||||||||||||||    
T  19980050 aaatgattaatatttgcaacggcaaaatggaatgattagtaacttcag-gatgaaaattcaaatgacctata 19979980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 27558136 - 27558215
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| ||| |||||||||| |||||||||||  ||   || ||||| |||||||||||||| |||||||    
T  27558136 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagg 27558215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 43937994 - 43937923
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| |||||||| ||||||||||||||    
T  43937994 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctata 43937923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 6571150 - 6571104
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| |||||||| |||||||||| |||| ||||||||||||    
T  6571150 cgtgacagtgattaagtggggagagggacaaaattttaaatgattaa 6571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 17102157 - 17102111
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  17102157 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 17102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 27991876 - 27991830
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  27991876 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 30948420 - 30948466
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  30948420 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 32680855 - 32680901
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  32680855 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 10935938 - 10935885
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| ||||||||  |||||||||||||| ||||||||||||    
T  10935938 ttagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 10935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 42019881 - 42019934
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| ||||||||||||||| |||||||| |||||| |||||    
T  42019881 ttagtgacatggcagtgattaagtgaggagagagacgaaattttaaataattaa 42019934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 45010742 - 45010689
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||| ||||||||| ||||||||||||    
T  45010742 ttagtgacttggcagtgattaagtggggagatggacgaaattttaaatgattaa 45010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 26825730 - 26825626
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| | |||||||||  |||| || ||||| |||||||||||||| || |||| | ||||  ||||||||| |    
T  26825730 aaatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 26825631  T
Q  202 ctttt 206  Q
    |||||    
T  26825630 ctttt 26825626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 26825890 - 26825826
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||  |||| || ||||| |||||||||||||| ||||||| ||||||| | |||||||    
T  26825890 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaa 26825826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 32688506 - 32688570
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaa 126  Q
    ||||||| |||| |||||||| |   ||||||||||| ||||||||||||| ||| |||||||||    
T  32688506 tgacgtggcagttattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggcaa 32688570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 45010893 - 45010941
Alignment:
Q  63 gacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||| |||| |||||||| |||||| |||||||| ||||||||||||    
T  45010893 gacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 45010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 13795 - 13612
Alignment:
Q  16 agccaagggtatttttgtcaacacaacccctaatttgctgacttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||    
T  13795 agccaagggtatttttgtcaacacaacccctaatttgctgacttagtgacgtggtagtgattaagtggggagagggacgaaatcttaaatgattaatttt 13696  T
Q  116 tacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    || | ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13695 tataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 13612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 14551 - 14690
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaa 159  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  14551 agtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggattagtaagctcagggatgaaaaa 14650  T
Q  160 tcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  14651 tcaaatggcctataattgaaggaatgaaatgcatatttaa 14690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 6e-71; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 25065119 - 25064936
Alignment:
Q  16 agccaagggtatttttgtcaacacaacccctaatttgctgacttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttt 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||    
T  25065119 agccaagggtatttttgtcaacacaccccctaatttgctgacttagtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaatttt 25065020  T
Q  116 tacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    || | || || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  25065019 tatagggacagaatgggaggattagtaagatcagggatgaaaaatcaaattacctataattgcagggatgaaatgcatatttaa 25064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 25065916 - 25066063
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaa 159  Q
    ||||| ||| |||| ||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||    
T  25065916 agtgaggtggcagtgattaagtggagagagggacgaaatcttaaatgattaatttttacaggggtaaaatggaaggattagtaagctcagggatgaaaaa 25066015  T
Q  160 tcaaatgacctataattgcaggaatgaaatgcatatttaaacctttta 207  Q
    ||||||| | |||||||  ||| |||||||||||||||||||||||||    
T  25066016 tcaaatggcttataattatagggatgaaatgcatatttaaacctttta 25066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 13295251 - 13295133
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||  ||    
T  13295251 agagggacgacattttaaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaatgacctataattacaggggtg 13295152  T
Q  186 aaatgcatatttaaacctt 204  Q
    |||||||||||||| ||||    
T  13295151 aaatgcatatttaagcctt 13295133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27998195 - 27998136
Alignment:
Q  2 cattggtctgaacaagccaagggtatttttgtcaacacaacccctaatttgctgacttag 61  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27998195 cattggtctgaacaagccaagggtatttttgtcagcacaacccctaatttgctgacttag 27998136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 32619484 - 32619389
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||| |||| |||||| ||||||||    
T  32619484 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 32619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 46282187 - 46282074
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| |||| |||    
T  46282187 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatg 46282088  T
Q  186 aaatgcatatttaa 199  Q
    |||  |||||||||    
T  46282087 aaaaacatatttaa 46282074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 6345625 - 6345732
Alignment:
Q  90 ggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaat 189  Q
    |||| |||| ||||||| ||||| ||| || ||||||||||| |||||||||||| |||| |||||||  ||||||||||  |||||||||| |||||||    
T  6345625 ggactaaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaat 6345724  T
Q  190 gcatattt 197  Q
    ||||||||    
T  6345725 gcatattt 6345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 46282777 - 46282888
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  46282777 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 46282876  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  46282877 aaaagcatattt 46282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 13295608 - 13295682
Alignment:
Q  130 gggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctt 204  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||    
T  13295608 gggagggttagtaagctcagagatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagcctt 13295682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 32622369 - 32622451
Alignment:
Q  115 ttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||| |||| ||||||  |||||||    
T  32622369 ttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 32622451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 51935218 - 51935296
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| || | |||||| ||||||||||    
T  51935218 gggcaaaatgggaggattagaaagctcagggatgaaaaatcaaatgacatataattacatggatgaaaagcatatttaa 51935296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 49093157 - 49093044
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  49093157 agagggacgaactttcaaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 49093058  T
Q  186 aaatgcatatttaa 199  Q
    ||| |||| |||||    
T  49093057 aaaagcatgtttaa 49093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 2828293 - 2828190
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| ||  |||||||| | |||||||||||| | |  ||||||||||||||||| ||||||||||| | ||||||||||||||||| |    
T  2828293 aaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaaggatgaaatgcatatttaagc 2828194  T
Q  202 cttt 205  Q
    ||||    
T  2828193 cttt 2828190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 6344355 - 6344260
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||| |||  |||||||  ||||||||||  ||||| |||| |||||||||||||||    
T  6344355 aaatgtttaatatttgcaagggcaaaatgggaggattagtaagttcatggatgaaatttcaaatgacccctaattacagggatgaaatgcatattt 6344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 50062932 - 50063043
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  |||||  |||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  50062932 agagggacgaactttcaaatgattagtaattacagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 50063031  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  50063032 aaaagcatattt 50063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 2829539 - 2829643
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaa-------atcaaatgacctataattgcaggaatgaaatgcata 194  Q
    ||||||||||| ||| || ||| ||||||||||||||||||||||||  ||||||||       ||||||||||||||||||| ||| ||||||||||||    
T  2829539 aaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaatatcaaatgacctataattgtagggatgaaatgcata 2829638  T
Q  195 tttaa 199  Q
    |||||    
T  2829639 tttaa 2829643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 32238779 - 32238704
Alignment:
Q  122 ggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||||||||||||||||| |||| |||||||  ||||||  |||||| ||||||| |||||||||||||||    
T  32238779 ggcaaaatgggaggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatattt 32238704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 10019657 - 10019728
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||| ||| ||| |||||||||| |||||||||||  |||| |||||||| ||||||||||||||    
T  10019657 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctata 10019728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 49093797 - 49093875
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaa 164  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| ||||||||||||||    
T  49093797 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 1103605 - 1103552
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  1103605 ttagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 1103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 6367706 - 6367653
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  6367706 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 14879115 - 14879062
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  14879115 ttagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 14879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 40210654 - 40210707
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  40210654 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 46163174 - 46163121
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| |||||||||||||||| |||||| |||||||| ||||||||||||    
T  46163174 ttagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaa 46163121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 52563748 - 52563656
Alignment:
Q  105 tgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||| ||| ||  |||||||||||||||||||||| ||||  |||||||   |||||  |||||| ||||||| |||||||||||||||    
T  52563748 tgattaatatttgcagtggcaaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcagggatgaaatgcatattt 52563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 34850351 - 34850414
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaaggg 123  Q
    ||||||||| |||| |||||||| ||||||||| ||||| |||||||||||| |||| ||||||    
T  34850351 agtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaaggg 34850414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 1047488 - 1047590
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| || |||| ||||||  ||||||||| |    
T  1047488 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagc 1047587  T
Q  202 ctt 204  Q
    |||    
T  1047588 ctt 1047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 13245994 - 13245936
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||||||| |||||||| |||||||||| |||| |||| ||||||| ||||    
T  13245994 ttagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaatttt 13245936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 34849152 - 34849090
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaaggg 123  Q
    |||||||| |||| |||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  34849152 gtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaattttgcaaggg 34849090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 37578476 - 37578530
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    ||||||||||| |||| |||||||| |||||| |||||||| |||||||||||||    
T  37578476 ttagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaat 37578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 2953748 - 2953845
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  2953748 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 2953845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 4960684 - 4960631
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| | ||||||||||||| ||||||||||||    
T  4960684 ttagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 4960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 10304055 - 10303998
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaa 127  Q
    |||| |||||||| ||||||||||||||| |||||||||||| ||||  |||||||||    
T  10304055 cagtgattaagtggggagagggacgaaattttaaatgattaaattttggaagggcaaa 10303998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 13914351 - 13914404
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| ||| |||| ||||||||||||||| ||||||||||||    
T  13914351 ttagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaa 13914404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 16970836 - 16970889
Alignment:
Q  75 attaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaa 128  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||  |||||||    
T  16970836 attaagtggggagagggacgaaattttaaatgattaaattttacagtggcaaaa 16970889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 17662134 - 17662187
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| | ||||||||||||| ||||||||||||    
T  17662134 ttagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 17662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 22103790 - 22103871
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggatta 139  Q
    ||||||||||| |||| ||||||||  |||||||||||||| |||| ||||||| ||||   |||||||||| | |||||||    
T  22103790 ttagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaattttgacagggcaaaatagcaggatta 22103871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 24009825 - 24009878
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| ||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  24009825 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24009878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 42248617 - 42248564
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||| ||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  42248617 ttagtcacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 5926619 - 5926540
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| |||||||    
T  5926619 aaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 5926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 19755689 - 19755768
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| ||| |||| |||||||||||||| |||||||    
T  19755689 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagg 19755768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 31514577 - 31514624
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  31514577 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaat 31514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 33347700 - 33347779
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| |||||||| | ||| |||||||||||  |||  || ||||| |||||||||||||| |||||||    
T  33347700 aaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagg 33347779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 46849942 - 46850021
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| || ||||||| ||| ||||| |||||  |||| || ||||| |||||||||||||| |||||||    
T  46849942 aaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagg 46850021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 49002976 - 49002869
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||  || ||||| |||||||||||||| ||||||| | ||||  ||||||||||     
T  49002976 aaatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaaa 49002877  T
Q  202 cttttatt 209  Q
    ||| ||||    
T  49002876 cttatatt 49002869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 183482 - 183528
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  183482 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 21444738 - 21444680
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||||||| |||| |||||||| ||||| ||||||||| |||| ||||||| ||||    
T  21444738 ttagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 24905427 - 24905473
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  24905427 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 25648021 - 25647975
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  25648021 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 25647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 28011500 - 28011454
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  28011500 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 28534820 - 28534893
Alignment:
Q  125 aaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||| |||||||||||| |||| |||||||  ||||||| |||||| || || ||| |||||||||||||||    
T  28534820 aaaatggaaggattagtaagttcagggatgaaatttcaaatgccctatatttaca-gaacgaaatgcatatttaa 28534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 33442854 - 33442900
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  33442854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 42267447 - 42267389
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||  ||| |||||||| |||||| |||||||| |||||||||||| ||||    
T  42267447 ttagtgacgtggtagtgattaagtggggagagagacgaaatattaaatgattaaatttt 42267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 1841603 - 1841550
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| |||||| |||||||| ||||||||||||    
T  1841603 ttagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaa 1841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 29980922 - 29980999
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgca 179  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||  || | || ||||| |||||||||||||| |||||    
T  29980922 aaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgca 29980999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 30711471 - 30711418
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| || |||||||||||| ||||||||||||    
T  30711471 ttagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaa 30711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 32917404 - 32917351
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| ||| |||| |||||||| |||||| |||||||| ||||||||||||    
T  32917404 ttagtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 34464733 - 34464786
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| |||||||||| |||| ||||||||||||    
T  34464733 ttagtgacatggcagtgattaagtggggagagggacaaaattttaaatgattaa 34464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 43758966 - 43758913
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| ||||||||  |||||||||||||| ||||||||||||    
T  43758966 ttagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 43758913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 44523420 - 44523473
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| ||||||||| | |||||| ||||| ||||||||||||    
T  44523420 ttagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaa 44523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 50062319 - 50062246
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaa 159  Q
    ||||||||||| | | ||||||||| |  ||||| | ||||||||| |||||||||||| |||| |||||||||    
T  50062319 agagggacgaactttcaaatgattagtaattacaggagcaaaatggaaggattagtaagttcagggatgaaaaa 50062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 40772634 - 40772598
Alignment:
Q  75 attaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  40772634 attaagtggggagagggacgaaattttaaatgattaa 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 25623404 - 25623278
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  ||| |||    
T  25623404 agagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattatagggatg 25623305  T
Q  186 aaatgcatatttaaaccttttattttt 212  Q
    |||||||||||||| || |||||||||    
T  25623304 aaatgcatatttaagccatttattttt 25623278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 25624417 - 25624530
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||    
T  25624417 agagggacgaaattttaaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatg 25624516  T
Q  186 aaatgcatatttaa 199  Q
    ||||||||||||||    
T  25624517 aaatgcatatttaa 25624530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 24387451 - 24387354
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  24387451 aaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctataattgcagggatgaaatgcatatttaa 24387354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 24388255 - 24388353
Alignment:
Q  101 taaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||  | |||||||||||| |||||||||||||||||    
T  24388255 taaatgattaatttttacaatggcaaaatggaaggattagtaagctcagggatgaaaaatcaaattgcttataattgcagggatgaaatgcatatttaa 24388353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 20101851 - 20101773
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  20101851 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaa 20101773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 29957933 - 29957814
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  29957933 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 29957834  T
Q  186 aaatgcatatttaaaccttt 205  Q
    ||| |||||||||| |||||    
T  29957833 aaaagcatatttaagccttt 29957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 20982624 - 20982515
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||||| |||||||||| |    
T  20982624 aaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagc 20982525  T
Q  202 cttttatttt 211  Q
    ||||| ||||    
T  20982524 cttttttttt 20982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 20103163 - 20103246
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctt 204  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |||| || ||| |||||||||| ||||    
T  20103163 gggcaaaatgggaggattagtaagctcagggatgaaaaatctaatggcctataattacagggataaaaagcatatttaagcctt 20103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 20983245 - 20983358
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| |  |||||||| |||| |||    
T  20983245 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggtctataattacagggatg 20983344  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  20983345 aaaagcatatttaa 20983358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 19620793 - 19620886
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 195  Q
    ||||||||||| ||| || ||||||||||| |||||||||||| |||| |||||||  |||||||||||||| ||| ||| | |||||||||||    
T  19620793 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacgaaatgcatat 19620886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 29958566 - 29958644
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||   ||||||||| |||| ||||||  |||||||||    
T  29958566 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacagcctataattacagggatgaaaaacatatttaa 29958644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 2318302 - 2318249
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| || |||||||||| ||||||||||||||| ||||||||||||    
T  2318302 ttagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaa 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 15848232 - 15848179
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  15848232 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 15848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 36755237 - 36755184
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  36755237 ttagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaa 36755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 37895631 - 37895684
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  37895631 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 33881672 - 33881572
Alignment:
Q  105 tgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctt 204  Q
    |||||||| ||| ||  ||||||||||||| |||| ||| || || |||||||  ||||||| |||||| || |||| ||||||||||||||| ||||||    
T  33881672 tgattaatatttgcagtggcaaaatgggagaattaataaccttagggatgaaatttcaaatgccctatatttacagggatgaaatgcatattttaacctt 33881573  T
Q  205 t 205  Q
    |    
T  33881572 t 33881572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 43236577 - 43236509
Alignment:
Q  129 tgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||| |||| |||||||  ||||||| |||||| ||||||| || ||||||||||||    
T  43236577 tgggaggattagtaagttcagggatgaaatttcaaatggcctatatttgcagggataaaatgcatattt 43236509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 33882892 - 33882967
Alignment:
Q  122 ggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||||||||| ||||   ||||||  ||||||| | |||| ||||||| |||||||||||||||    
T  33882892 ggcaaaatgggaggattagtaacctcatatatgaaatttcaaatgccttatatttgcagggatgaaatgcatattt 33882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 10840620 - 10840562
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||||||| |||||||| | ||||||||||||  |||||||||||| ||||    
T  10840620 ttagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 11721374 - 11721432
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||||||| |||||||| |||||| |||||||| |||| ||||||| ||||    
T  11721374 ttagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaatttt 11721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 9694026 - 9694103
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgca 179  Q
    ||||||||||| ||| ||| | |||||||| |||||||||||  |||| || ||||| |||||||||||||| |||||    
T  9694026 aaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 9694103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 36382305 - 36382252
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||| ||||| ||||||||||||    
T  36382305 ttagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 36382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 39423659 - 39423606
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  39423659 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 39423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 44714045 - 44714098
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  44714045 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 44714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 1150221 - 1150325
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||  |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  ||||||||| |    
T  1150221 aaatgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagc 1150320  T
Q  202 ctttt 206  Q
    |||||    
T  1150321 ctttt 1150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 7983837 - 7983905
Alignment:
Q  129 tgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||| |||  |||||||  |||||||||||||| |||| |  |||||||||||||||    
T  7983837 tgggaggattagtaagttcatagatgaaatttcaaatgacctatatttgctgagatgaaatgcatattt 7983905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 16367063 - 16366959
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| || |||| | ||||  ||||||||| |    
T  16367063 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 16366964  T
Q  202 ctttt 206  Q
    |||||    
T  16366963 ctttt 16366959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 20911230 - 20911126
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  | ||||||| |    
T  20911230 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 20911131  T
Q  202 ctttt 206  Q
    |||||    
T  20911130 ctttt 20911126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 37985011 - 37985090
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    |||||||||| |||| ||  |||||| ||| |||||||||||  |||| || ||||||||||||||| |||| |||||||    
T  37985011 aaatgattaaattttgcagtggcaaattggaaggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagg 37985090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 1150037 - 1149935
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||  | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||| | ||||||| |    
T  1150037 aaatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagc 1149938  T
Q  202 ctt 204  Q
    |||    
T  1149937 ctt 1149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 1696000 - 1696046
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  1696000 cgtgacagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 6658015 - 6657969
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  6658015 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 6846922 - 6846856
Alignment:
Q  64 acgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatg 130  Q
    ||||| ||||||||||||| | ||||||||||||| |||||||||| | |||| || || |||||||    
T  6846922 acgtggcagtaattaagtgggaagagggacgaaattttaaatgattcaattttgcagggacaaaatg 6846856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 11689685 - 11689627
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||||||| |||| |||||||| ||||| ||||||||| |||| ||||||| ||||    
T  11689685 ttagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 11689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 14900743 - 14900789
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  14900743 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 16099192 - 16099146
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  16099192 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 17266534 - 17266484
Alignment:
Q  66 gtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  17266534 gtgacagtgattaagtggggagagggaccaaattttaaatgattaaatttt 17266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 18477007 - 18476905
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    |||||||||| |||| ||  |||| | ||| |||||||||||  |||| ||  |||| |||||||||||||| ||||||| | |||| || |||||||||    
T  18477007 aaatgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaaac 18476908  T
Q  202 ctt 204  Q
    |||    
T  18476907 ctt 18476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 33739840 - 33739794
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  33739840 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 39498447 - 39498401
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  39498447 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 39498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 6848022 - 6848099
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggatta 139  Q
    |||||||  |||||||||||| || || ||||||||| |||||||||||| |||| || || |||||||  |||||||    
T  6848022 tgacgtggtagtaattaagtggggtgatggacgaaattttaaatgattaaatttttcagggacaaaatgtcaggatta 6848099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 7981120 - 7981051
Alignment:
Q  129 tgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattta 198  Q
    |||||||||||||||| || | |||||||  |||||||||||||| ||||||| |  |||||||| ||||    
T  7981120 tgggaggattagtaagttcggggatgaaatttcaaatgacctatagttgcagggagaaaatgcattttta 7981051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 10446932 - 10446835
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| ||||||| |||||| ||||||| | ||||  |||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 10446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 10712867 - 10712814
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||  ||| |||||||| ||||||||| ||||| ||||||||||||    
T  10712867 ttagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaa 10712814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 11163319 - 11163360
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  11163319 cagtgattaagtggggagagggacgaaattttaaatgattaa 11163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 25892538 - 25892485
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| ||||||  |||||||||||| ||||||||||||| | ||||||||||||    
T  25892538 ttagagacgtggtagtaattaagtggggagagggacgaatttttaaatgattaa 25892485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 28599527 - 28599426
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| ||| |||||||||| |||||||||||  |||  || ||||| |||||||| ||||| ||||| | | ||||  | |||||||||    
T  28599527 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaaac 28599428  T
Q  202 ct 203  Q
    ||    
T  28599427 ct 28599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 32519255 - 32519158
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || | ||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  32519255 aaatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 32519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 36479862 - 36479809
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||| ||||||||| ||||||||||||    
T  36479862 ttagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaa 36479809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 43237747 - 43237815
Alignment:
Q  129 tgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||| |||| ||| |||  ||||||| |||||| ||||||| |  ||||||||||||    
T  43237747 tgggaggattagtaagttcagggataaaatttcaaatggcctatatttgcagggacaaaatgcatattt 43237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 199
Target Start/End: Original strand, 32717065 - 32717202
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatc 161  Q
    ||||||| |||||||||| || | ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| | || |||||||||||    
T  32717065 tgacgtggcagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatc 32717164  T
Q  162 aaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  32717165 aaatgacctataattacagggatgaaatgcatatttaa 32717202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 206
Target Start/End: Original strand, 29192953 - 29193097
Alignment:
Q  62 tgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatc 161  Q
    |||||||||||| |||||  | | |||||||| |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  29192953 tgacgtgacagtgattaatcgggaagagggacaaaattttaaataattaatttttacaggggcgaaatgggaggattagtaagctcagggatgaaaaatc 29193052  T
Q  162 aaatgacctataattgcaggaatgaaatgcatatttaaacctttt 206  Q
    ||||| ||||||||| |||| ||||||||||||||||| ||||||    
T  29193053 aaatggcctataattacagggatgaaatgcatatttaagcctttt 29193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 197
Target Start/End: Complemental strand, 29192188 - 29192040
Alignment:
Q  49 tttgctgacttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctca 148  Q
    |||||| | ||| ||||||| |||| |||||  | | ||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||    
T  29192188 tttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaatttttacaggggcaaaacggaaggattagtaagctca 29192089  T
Q  149 gtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |  ||||||||||||||| ||||||||| |||| |||||||||||||||    
T  29192088 ggaatgaaaaatcaaatggcctataattacagggatgaaatgcatattt 29192040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 22736690 - 22736787
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||  |||||||||    
T  22736690 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 22736787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 37249317 - 37249204
Alignment:
Q  84 ggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaa 183  Q
    ||||||||||||| | | ||||||||| |  ||||| ||||||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||| |    
T  37249317 ggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattaataagctcagggatgaaaaatcaaacggcctataattgcaggga 37249218  T
Q  184 tgaaatgcatattt 197  Q
    ||||| ||||||||    
T  37249217 tgaaaagcatattt 37249204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 37249782 - 37249892
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||    
T  37249782 agagggacgaactttcaaatgattagtaattacaagggcagaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagg-atg 37249880  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  37249881 aaaagcatattt 37249892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 2944029 - 2943916
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaat- 184  Q
    ||||||||||| | | |||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||| ||     
T  2944029 agagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcag-gatgaaaaatcaaacggcctataattgcagggata 2943931  T
Q  185 gaaatgcatatttaa 199  Q
    |||| ||||||||||    
T  2943930 gaaaagcatatttaa 2943916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 48189083 - 48189209
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||| || | |||    
T  48189083 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaacggcctataattacaaggatg 48189182  T
Q  186 aaatgcatatttaaaccttttattttt 212  Q
    ||| |||||||||| |||||| |||||    
T  48189183 aaaagcatatttaagcctttttttttt 48189209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 45279268 - 45279381
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  45279268 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 45279367  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  45279368 aaaagcatatttaa 45279381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 44481953 - 44482048
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||  |||||||||||||||| || |||||| |||| |||||| ||||||||    
T  44481953 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 44482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 2944650 - 2944763
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| |||||||||||  ||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  2944650 agagggacgaactttcaaatgattagtaattacaggggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 2944749  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  2944750 aaaagcatatttaa 2944763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 11026616 - 11026729
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||| ||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  11026616 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatg 11026715  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  11026716 aaaagcatatttaa 11026729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 32716365 - 32716285
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatg 166  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||| ||||  ||| ||||||||||||    
T  32716365 agagggacgaaattttaaatggttaatttttacaagggtaaaatgagaggattagtaaactcaaggataaaaaatcaaatg 32716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 45278660 - 45278549
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||  |||| |||||||||||||| | ||||||||| |||| |||    
T  45278660 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctataattacagggatg 45278561  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  45278560 aaaagcatattt 45278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 48188494 - 48188383
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  48188494 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 48188395  T
Q  186 aaatgcatattt 197  Q
    |||  |||||||    
T  48188394 aaaaacatattt 48188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 44476130 - 44476054
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| || |||||| |||| ||||||  |||||||    
T  44476130 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 44476054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 1757304 - 1757406
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||| |  ||||| ||||||||||| |||||||||||| |||  |||||||||||||| | ||||||||| |||| ||||||  ||||||||| |    
T  1757304 aaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaagc 1757403  T
Q  202 ctt 204  Q
    |||    
T  1757404 ctt 1757406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 43105818 - 43105920
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||  |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  43105818 agagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 43105917  T
Q  186 aaa 188  Q
    |||    
T  43105918 aaa 43105920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 26463882 - 26463935
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  26463882 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 26463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 1756666 - 1756576
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataatt 176  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||  |||||||||||||| | |||||||||    
T  1756666 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataatt 1756576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 1741487 - 1741390
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| |||||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  1741487 aaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 1741390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 9294242 - 9294295
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  9294242 ttagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 9294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 33689663 - 33689716
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  33689663 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 41988106 - 41988037
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaa 127  Q
    ||||||| ||| |||| ||||||||||||||| |||||||| |||||||||||| |||| | ||||||||    
T  41988106 ttagtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaattttgcgagggcaaa 41988037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 51994173 - 51994223
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 51994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 55036771 - 55036669
Alignment:
Q  100 ttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||| ||| || ||||| | ||| |||||||||||  ||||  ||||||| |||||||||||||| ||||||| | ||||  | |||||||    
T  55036771 ttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 55036672  T
Q  200 acc 202  Q
    |||    
T  55036671 acc 55036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 23458263 - 23458316
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| ||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  23458263 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23458316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 33156278 - 33156331
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| || |||||||||||| ||||||||||||    
T  33156278 ttagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 33156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 40758288 - 40758235
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||  ||| |||||||| ||||||||||||||| ||||||||||||    
T  40758288 ttagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 40758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 43105320 - 43105259
Alignment:
Q  115 ttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataatt 176  Q
    ||||| ||||||||||  |||||||||||| |||| |||||||||||||| | |||||||||    
T  43105320 ttacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataatt 43105259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 43384427 - 43384374
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| |||||| |||||||| ||||||||||||    
T  43384427 ttagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 43384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 46670537 - 46670610
Alignment:
Q  100 ttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||||| ||| ||| | |||||||| || ||||||||  |||| |||||||| ||||||||||||||    
T  46670537 ttaaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattcaaatgacctata 46670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 22735459 - 22735403
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaa 158  Q
    ||||||||| |  ||||| |||||||||||||||||||||||||| || ||||||||    
T  22735459 aaatgattagtaattacaggggcaaaatgggaggattagtaagcttagggatgaaaa 22735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 30890307 - 30890236
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||| ||||||| |||||||| | | |||||||||  |||| |||||||| |||||||| |||||    
T  30890307 aaatgattaatatttacaatggcaaaatagaaagattagtaacttcagagatgaaaattcaaatgatctata 30890236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||||||||| ||||| || ||||||||||||||| |||| ||||||| ||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 2796316 - 2796270
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  2796316 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 2796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 8041753 - 8041707
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  8041753 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 10770751 - 10770797
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  10770751 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 10998157 - 10998235
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcag 180  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||    
T  10998157 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcag 10998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 11026017 - 11025975
Alignment:
Q  122 ggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaa 164  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  11026017 ggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 11025975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 20704611 - 20704669
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||||||||| || |||||||| | ||||||||||||| |||| ||||||| ||||    
T  20704611 ttagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaatttt 20704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 21255815 - 21255901
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    ||||||||||| ||||||| |||||||||| || ||||||||  | |  || ||||| |||||||| ||||| ||||||||| ||||    
T  21255815 aaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaa 21255901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 36314558 - 36314604
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  36314558 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 48322637 - 48322683
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  48322637 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 54466560 - 54466514
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  54466560 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 21300393 - 21300340
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||||||  |||| |||||||| |||||||||||||| ||||||| ||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 21300340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 40033748 - 40033793
Alignment:
Q  66 gtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||||    
T  40033748 gtgacagtgattaagtggggagagggacaaaattttaaatgattaa 40033793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 40256974 - 40256897
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgca 179  Q
    ||||||||||| ||| |||||||| | ||| |||||||||||  |||| || ||||| |||||| ||||||| |||||    
T  40256974 aaatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctatatttgca 40256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 40506071 - 40506124
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||| || ||||||| |||||||| |||||| |||||||| ||||||||||||    
T  40506071 ttagttacatgacagtgattaagtgcggagagagacgaaattttaaatgattaa 40506124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 55036953 - 55037054
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||   | ||||| |||||||||||||| ||||||| | ||||  |||||||||||    
T  55036953 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaac 55037052  T
Q  202 ct 203  Q
    ||    
T  55037053 ct 55037054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 39030477 - 39030573
Alignment:
Q  203 ttttatttttaacgatatgtgatatataagttgattcactccttcacatttttctcattccctctcttaactctttggcctctcttcatctcactcg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  39030477 ttttatttttaacgatatgtgatatataagttgattcactccttcacatttttctcatttcctctcttaactctttggcctctcttaatctcactcg 39030573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 34213880 - 34213761
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | |||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||| |||    
T  34213880 agagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagggatg 34213781  T
Q  186 aaatgcatatttaaaccttt 205  Q
    ||| |||||||||| |||||    
T  34213780 aaaagcatatttaagccttt 34213761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 38599064 - 38598962
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || |||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||| |    
T  38599064 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagc 38598965  T
Q  202 ctt 204  Q
    |||    
T  38598964 ctt 38598962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 1231626 - 1231529
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  1231626 aaatgattaatttttacaggggtaaaatgggaggattagtaagctcatggatgaaaaatcaaagggcctataattgtagggatgaaatgcatatttaa 1231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 25288076 - 25288173
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  25288076 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaa 25288173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 33497635 - 33497726
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttttattttt 212  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||| |||||| |||||||||| |||||| |||||    
T  33497635 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaagcctttttttttt 33497726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 1232799 - 1232894
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||| |||||||||||||||||    |||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  1232799 aaatgattaatttttacaggggcaaaatgggaggatac--aagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaa 1232894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 7393145 - 7393242
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  7393145 aaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgtctatttaa 7393242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 34665886 - 34665773
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  34665886 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 34665787  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  34665786 aaaagcatatttaa 34665773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 4970225 - 4970130
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||| ||||| ||| || ||||||||||| |||||||||||| |||| |||||||  ||||||||||  |||||||||| |||||||||||||||    
T  4970225 aaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcatattt 4970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 24377281 - 24377186
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||| ||||| ||| || ||| |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||| |||||||||||||||||    
T  24377281 aaatgcttaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaacttcaaatgacccctaattgcaagaatgaaatgcatattt 24377186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 34214512 - 34214631
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtga-tgaaaaatcaaatgacctataattgcaggaat 184  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| || |||||||||||| | ||||||||| |||| ||    
T  34214512 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaatcaaacggcctataattacagggat 34214611  T
Q  185 gaaatgcatatttaaacctt 204  Q
    |||| |||||||||| ||||    
T  34214612 gaaaagcatatttaagcctt 34214631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 33497100 - 33497020
Alignment:
Q  118 caagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattta 198  Q
    |||||||||||||| |||||||||||| |||   ||||||||||||||||||||||||| || ||||||||  ||||||||    
T  33497100 caagggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctataattacatgaatgaaaatcatattta 33497020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 24379015 - 24379089
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatat 195  Q
    ||||||||| |||||||||||||| |||  ||||||| |||||||||||  |||||||||| |||||||||||||    
T  24379015 gggcaaaataggaggattagtaagttcaaggatgaaatatcaaatgacccctaattgcagggatgaaatgcatat 24379089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 4463455 - 4463528
Alignment:
Q  131 ggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctt 204  Q
    |||||||||||||| |||| |||||||  ||||||| |||||| ||||||| ||||||||||||||||| ||||    
T  4463455 ggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcagggatgaaatgcatatttaagcctt 4463528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 29574819 - 29574747
Alignment:
Q  125 aaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||| |||||||||||| | || |||||||  |||||||||||||| ||||||| |||||||||||||||    
T  29574819 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 29574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 34666525 - 34666635
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||  |||    
T  34666525 agagggacgaactttcaaatgattagtaattaca-gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagcgatg 34666623  T
Q  186 aaatgcatattt 197  Q
    |||  |||||||    
T  34666624 aaaaacatattt 34666635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 4405944 - 4405997
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||||||||||    
T  4405944 ttagtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaa 4405997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 16388810 - 16388863
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  16388810 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16388863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 36928620 - 36928567
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  36928620 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 31608797 - 31608849
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgatta 110  Q
    ||||||||||| |||| |||||||| ||||||||||||||| |||||||||||    
T  31608797 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 29575910 - 29575989
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaacctttt 206  Q
    |||||||||||||||||  | || |||||||  |||||||  ||||| ||||||| ||||||||||||||| ||||||||    
T  29575910 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattttaacctttt 29575989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 36574890 - 36574807
Alignment:
Q  129 tgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttttattttt 212  Q
    |||||||||||||||| |||| |||||||  ||||||| ||||||  |||||  ||||||||||||||| | |||||| |||||    
T  36574890 tgggaggattagtaagttcagggatgaaatttcaaatgccctatatatgcagagatgaaatgcatattttagcctttttttttt 36574807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 23698535 - 23698581
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  23698535 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 23698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 9632428 - 9632351
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgca 179  Q
    ||||||||||| ||| ||| | |||||||| |||||||||||  |||| || ||||| |||||||||||||| |||||    
T  9632428 aaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 9632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 13186204 - 13186151
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| |||||| |||||||| ||||||||||||    
T  13186204 ttagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 13186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 27436643 - 27436566
Alignment:
Q  122 ggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||  | |||||||||  |||| || ||||| ||||| |||||||| ||||||| |||||||||||||||||    
T  27436643 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaa 27436566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 27857026 - 27857127
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| |||||||| | ||| | |||||||||  |||| || ||||| ||||||| |||||| ||||||| | ||||  |||||||||||    
T  27857026 aaatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaaac 27857125  T
Q  202 ct 203  Q
    ||    
T  27857126 ct 27857127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 35756726 - 35756673
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  35756726 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 35756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 39071820 - 39071767
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| | |||| |||||||| ||||||||||||||| ||||||||||||    
T  39071820 ttagtgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaa 39071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 40318248 - 40318301
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||||||||| ||||||||| ||||||||||||    
T  40318248 ttagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaa 40318301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 1425313 - 1425359
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  1425313 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 3041716 - 3041762
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  3041716 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 7392308 - 7392250
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaat 160  Q
    ||||||||||| ||| || ||  |||||||||||||||||||| |||| ||||||||||    
T  7392308 aaatgattaatatttgcagggataaaatgggaggattagtaagttcagggatgaaaaat 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 23663805 - 23663851
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  23663805 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 24085918 - 24085860
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||  |||||| ||||    
T  24085918 ttagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaatttt 24085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 36325371 - 36325325
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  36325371 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 38845559 - 38845605
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  38845559 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 40775910 - 40775956
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  40775910 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 44407117 - 44407163
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  44407117 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 23424796 - 23424893
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| | |||||||||  |||| || ||||| ||||||| |||||| ||||||||| ||||  |||||||||    
T  23424796 aaatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaa 23424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 27437539 - 27437616
Alignment:
Q  122 ggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||  | |||||||||  |||| || ||||| ||||| | |||||| ||||||| |||||||||||||||||    
T  27437539 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatgaaatgcatatttaa 27437616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 29190443 - 29190548
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| ||| |||| |||||||  ||||| ||||||| | ||||  | |||||||||    
T  29190443 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaaac 29190542  T
Q  202 ctttta 207  Q
    ||||||    
T  29190543 ctttta 29190548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 36623613 - 36623560
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||||||  |||| |||||||| |||||||||||||| ||||||| ||||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 36623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 37343042 - 37342989
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||||||  |||| |||||||| |||||||||||||| ||||||| ||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 37342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 38862750 - 38862709
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  38862750 cagtgattaagtggggagagggacgaaattttaaatgattaa 38862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 38955835 - 38955794
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||||||||||||| ||||| ||||||||||||    
T  38955835 cagtgattaagtgaggagagggatgaaattttaaatgattaa 38955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 40422475 - 40422552
Alignment:
Q  133 aggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttttattt 210  Q
    |||||||||||  |||| || ||||| |||||||||||||| ||||||| ||||||  | ||||||| ||| ||||||    
T  40422475 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcctattattt 40422552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 41801916 - 41801819
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  ||||  | ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  41801916 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaa 41801819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 43866835 - 43866888
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||||||  |||| |||||||| |||||||||||||| ||||||| ||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 43866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 7392251 - 7392219
Alignment:
Q  171 ataattgcaggaatgaaatgcatatttaaacct 203  Q
    ||||||||||| |||||||||||||||||||||    
T  7392251 ataattgcagggatgaaatgcatatttaaacct 7392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 30710997 - 30710945
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    |||||||||||||||||||| || |   ||||||||||| |||||||||||||    
T  30710997 agtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaat 30710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 40525607 - 40525499
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| ||  |||| | ||| |||||||||||  |||| || ||||| ||||||||| |||| ||||||||| ||||  | ||||||| |    
T  40525607 aaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaagacttatttaagc 40525508  T
Q  202 cttttattt 210  Q
    |||| ||||    
T  40525507 ctttaattt 40525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 22870446 - 22870559
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||    
T  22870446 agagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatg 22870545  T
Q  186 aaatgcatatttaa 199  Q
    ||||||||||||||    
T  22870546 aaatgcatatttaa 22870559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 22869721 - 22869612
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || | |||    
T  22869721 agagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaaggatg 22869622  T
Q  186 aaatgcatat 195  Q
    ||||||||||    
T  22869621 aaatgcatat 22869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 14744730 - 14744835
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||| |    
T  14744730 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcagggatgaaatgcatatttaagc 14744829  T
Q  202 ctttta 207  Q
    ||||||    
T  14744830 ctttta 14744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 20857048 - 20856935
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| |||| |||    
T  20857048 agagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatg 20856949  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  20856948 aaaagcatatttaa 20856935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 36476881 - 36476770
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||    
T  36476881 agagggacgaactttcaaatgattagtaattacaagggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagggatg 36476782  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  36476781 aaaagcatattt 36476770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 20857531 - 20857644
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||| ||  ||||||||||||| | ||||||||| || | |||    
T  20857531 agagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagcttaggaatgaaaaatcaaacggcctataattacatggatg 20857630  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  20857631 aaaagcatatttaa 20857644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 36477358 - 36477471
Alignment:
Q  84 ggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaa 183  Q
    ||||||||||||| | | ||||||||| |  ||||| ||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||| |    
T  36477358 ggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaacggcctataattgcaggga 36477457  T
Q  184 tgaaatgcatattt 197  Q
    ||||| ||||||||    
T  36477458 tgaaaagcatattt 36477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 31108008 - 31107934
Alignment:
Q  125 aaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  31108008 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 31107934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 20072853 - 20072966
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| |||| |||    
T  20072853 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatg 20072952  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  20072953 aaaagcatatttaa 20072966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 8654185 - 8654110
Alignment:
Q  124 caaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||  |||||||||    
T  8654185 caaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaa 8654110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 21978017 - 21978112
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||| |  ||||| ||||||| ||||||||||||||||||||| |||||||||||||||| || |||||| |||| |||||| ||||||||    
T  21978017 aaatgattagtaattacaggggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 21978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 21978971 - 21979082
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    |||| ||||||||||||| ||  ||||| |||||||||||||| ||   |||||||||||||||| | |||||||||||| ||||||||||||||||| |    
T  21978971 aaattattaatttttacagggataaaataggaggattagtaagttcgaggatgaaaaatcaaatggcttataattgcagggatgaaatgcatatttaagc 21979070  T
Q  202 ct-tttattttt 212  Q
    || |||||||||    
T  21979071 ctatttattttt 21979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 39181173 - 39181054
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | | ||||||| |||| |||    
T  39181173 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatg 39181074  T
Q  186 aaatgcatatttaaaccttt 205  Q
    ||| |||||||||| |||||    
T  39181073 aaaagcatatttaagccttt 39181054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 39181780 - 39181893
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| |||| ||     
T  39181780 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatt 39181879  T
Q  186 aaatgcatatttaa 199  Q
    |||  |||||||||    
T  39181880 aaaaacatatttaa 39181893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 16533009 - 16532898
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| ||||||| |||| |||| |||||||||||||| | ||||||||| |||| |||    
T  16533009 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattaataagttcagggatgaaaaatcaaacggcctataattacagggatg 16532910  T
Q  186 aaatgcatattt 197  Q
    ||| ||||||||    
T  16532909 aaaagcatattt 16532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 13963008 - 13962955
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  13963008 ttagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaa 13962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 16533609 - 16533722
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| ||||||| |||| |||| |||||||||||||| | |||||||||  ||| |||    
T  16533609 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattaataagttcagagatgaaaaatcaaacggcctataattatagggatg 16533708  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  16533709 aaaagcatatttaa 16533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 20072237 - 20072124
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||  |||||||||||| |||| |||||||||||||| | ||||||||| |||  |||    
T  20072237 agagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagagatg 20072138  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  20072137 aaaagcatatttaa 20072124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 31108338 - 31108438
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| |||||| ||  ||||||| | |||||||||| |||  ||||||||||||||||  ||||| ||||||| ||||||| |||||||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaatg-tctatatttgcagggatgaaatacatatttaaac 31108436  T
Q  202 ct 203  Q
    ||    
T  31108437 ct 31108438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 8673774 - 8673853
Alignment:
Q  118 caagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||||||||||| ||||| ||| |||  |||||||  ||||||| |||||| ||||||| |||||||||||||||    
T  8673774 caagggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 8673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 21260965 - 21260886
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| ||| |||||||||| |||||||||||  |||| || ||||| |||||||||||||| |||||||    
T  21260965 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 21260886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 21972189 - 21972095
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||| |  ||||| | |||||||||||||||||||||||| || |||||||||||||||| || |||||| |||| ||||||  |||||||    
T  21972189 aaatgattagtaattacaggagcaaaatgggaggattagtaagctgag-gatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 21972095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 39402148 - 39402210
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaa 164  Q
    ||||||||||| ||| || ||||||||||||||||||||||||  ||| ||||||||||||||    
T  39402148 aaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 25253186 - 25253089
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||  |||| || ||||| |||||||| ||||| ||||||| ||||||  |||||||||    
T  25253186 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaa 25253089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 25316976 - 25316879
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||  |||| || ||||| |||||||| ||||| ||||||| ||||||  |||||||||    
T  25316976 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaa 25316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 29646646 - 29646699
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  29646646 ttagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 29646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 32242386 - 32242333
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  32242386 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32242333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 14745548 - 14745469
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| |||||||| |||||||||||||| |||||||    
T  14745548 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagg 14745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 12904898 - 12904840
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||||||| | |||||||| ||||||||||||||| |||||| ||||| ||||    
T  12904898 ttagtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaatttt 12904840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 32052508 - 32052610
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  ||||||||| |    
T  32052508 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 32052607  T
Q  202 ctt 204  Q
    |||    
T  32052608 ctt 32052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 34404560 - 34404498
Alignment:
Q  126 aaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||| |||||||||||  ||||||| ||||| |||||||||||||| ||||||||| ||||    
T  34404560 aaatggaaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaa 34404498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 5994033 - 5993980
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  5994033 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 5993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 8322548 - 8322495
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||  ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  8322548 ttagtgaaatgacagtgattaagtggggagagggacgaaattttaaatgattaa 8322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 25253370 - 25253467
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||| | ||| |||||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  25253370 aaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 25253467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 25317161 - 25317258
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||| | ||| |||||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  |||||||||    
T  25317161 aaatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 25317258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 35512292 - 35512239
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| ||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  35512292 ttagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 35512239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 39453444 - 39453391
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  39453444 ttagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaa 39453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 33735597 - 33735701
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  | ||||||| |    
T  33735597 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 33735696  T
Q  202 ctttt 206  Q
    |||||    
T  33735697 ctttt 33735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 35920477 - 35920521
Alignment:
Q  67 tgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  35920477 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 35920521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 37945094 - 37945023
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctata 173  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||  |||| || ||||| ||||||||||||||    
T  37945094 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctata 37945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 297274 - 297320
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  297274 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 3529133 - 3529179
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  3529133 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 3529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 6758125 - 6758171
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  6758125 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 22024154 - 22024232
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcag 180  Q
    ||||||||||| ||| ||  |||||| ||| |||||||||||  | ||||| ||||| |||||||||||||| ||||||    
T  22024154 aaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcag 22024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 24547412 - 24547462
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||  ||||||| ||||||||||||||| ||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaa 24547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 41930653 - 41930607
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  41930653 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 5024302 - 5024355
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||||||    
T  5024302 ttagtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaa 5024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 10684083 - 10684030
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||| |||||||||||| || ||| |||| ||||||||||||    
T  10684083 ttagtgacatgacagtgattaagtgaggaaagtgacaaaattttaaatgattaa 10684030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 11047581 - 11047528
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| |||||| |||||||| ||||||||||||    
T  11047581 ttagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaa 11047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 14194719 - 14194760
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  14194719 cagtgattaagtggggagagggacgaaattttaaatgattaa 14194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 18934813 - 18934716
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||| |||| ||| ||| |||||||||  |||||||||||  |||  || ||||| ||||||||| |||| ||||||| ||||||  |||||||||    
T  18934813 aaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaa 18934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 19892592 - 19892645
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| |||||  |||||||| ||||||||||||    
T  19892592 ttagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaa 19892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 20840677 - 20840624
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| |||||||||| |||| |||||| |||||    
T  20840677 ttagtgacgtggcagtgattaagtggggagagggacaaaattttaaatcattaa 20840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 28269684 - 28269725
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  28269684 cagtgattaagtggggagagggacgaaattttaaatgattaa 28269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 28771134 - 28771175
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  28771134 cagtgattaagtggggagagggacgaaattttaaatgattaa 28771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 31482667 - 31482708
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  31482667 cagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 38442200 - 38442159
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  38442200 cagtgattaagtggggagagggacgaaattttaaatgattaa 38442159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 38475295 - 38475336
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  38475295 cagtgattaagtggggagagggacgaaattttaaatgattaa 38475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 6150581 - 6150545
Alignment:
Q  75 attaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  6150581 attaagtggggagagggacgaaattttaaatgattaa 6150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 8323156 - 8323056
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| | | ||| |||||||||| |||||||||||  |||  || ||||| |||||||||||||| ||  ||| ||||||  | |||||||||    
T  8323156 aaatgattaatatcttcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacctatttaaac 8323057  T
Q  202 c 202  Q
    |    
T  8323056 c 8323056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 22533674 - 22533778
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| ||| ||||| || | |||||||||||  || | || ||||| |||||||||||||| ||||||| | ||||    |||||||||    
T  22533674 aaatgattaatatttgcaatggcaacattgaaggattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaaaagctatttaaac 22533773  T
Q  202 ctttt 206  Q
    |||||    
T  22533774 ctttt 22533778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 23455673 - 23455792
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||    
T  23455673 agagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaatgacctataattacagggatg 23455772  T
Q  186 aaatgcatatttaaaccttt 205  Q
    |||||||||||||| |||||    
T  23455773 aaatgcatatttaagccttt 23455792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 23455070 - 23454952
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||| ||| |||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||| |||    
T  23455070 agagggacggaattttaaatgggtaatttttacaggggcaaaatgggatgattagtaagctcagggatgaaaaatcaaatggcctataattacagggatg 23454971  T
Q  186 aaatgcatatttaaacctt 204  Q
    |||||||||||||| ||||    
T  23454970 aaatgcatatttaagcctt 23454952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 53477080 - 53477177
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  53477080 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatgaaatgcatatttaa 53477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 38982578 - 38982691
Alignment:
Q  84 ggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaa 183  Q
    ||||||||||||| | | ||||||||| |  ||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |    
T  38982578 ggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcaggga 38982677  T
Q  184 tgaaatgcatattt 197  Q
    ||||| ||||||||    
T  38982678 tgaaaagcatattt 38982691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 54591587 - 54591675
Alignment:
Q  111 atttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||| || ||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  54591587 atttttgcaggggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcagggatgaaatgcatatttaa 54591675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 54590243 - 54590144
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| |||  |  |||||||||| || ||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54590243 aaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaaac 54590144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 55013089 - 55013198
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||| |  ||||| ||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||| || | |||||| |||||||||| |    
T  55013089 aaatgattagtaattacaggggcaaactgggaggattagtaagctcag-gatgaaaaatcaaatagcctataattacatggatgaaaagcatatttaagc 55013187  T
Q  202 cttttattttt 212  Q
    |||||||||||    
T  55013188 cttttattttt 55013198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 56556698 - 56556578
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||  |||||||||||||| | ||||||||| |||| |||    
T  56556698 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatg 56556599  T
Q  186 aaatgcatatttaaacctttt 206  Q
    ||| |||||||||| ||||||    
T  56556598 aaaagcatatttaagcctttt 56556578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 52816407 - 52816526
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  52816407 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctataattacagggatg 52816506  T
Q  186 aaatgcatatttaaaccttt 205  Q
    |||  ||||||||| |||||    
T  52816507 aaaatcatatttaagccttt 52816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 38813670 - 38813557
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | |||| |||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  38813670 agagggacgaactttcaaattattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 38813571  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  38813570 aaaagcatatttaa 38813557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 13336863 - 13336935
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||||||||||||| |||| |||||||  |||||||||||||| ||||||| |||||||||||||||||    
T  13336863 aatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatatttaa 13336935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 38814311 - 38814431
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | |||| |||| || | |||    
T  38814311 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctaaaattacaaggatg 38814410  T
Q  186 aaatgcatatttaaacctttt 206  Q
    ||| |||||||||| ||||||    
T  38814411 aaaagcatatttaagcctttt 38814431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 56557309 - 56557422
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||  |||||||||||||| | |||||||||  ||| |||    
T  56557309 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattagagggatg 56557408  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  56557409 aaaagcatatttaa 56557422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 52815779 - 52815660
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | || |||||| |  ||||| ||||||||||  |||||||||||| |||| ||| |||||||||| | ||||||||| |||| |||    
T  52815779 agagggacgaactttcaagtgattagtaattacaggggcaaaatgaaaggattagtaagttcagggataaaaaatcaaacggcctataattacagggatg 52815680  T
Q  186 aaatgcatatttaaaccttt 205  Q
    ||| |||||||||| |||||    
T  52815679 aaaagcatatttaagccttt 52815660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 22882352 - 22882422
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||||||| |||| |||| |||||||  |||||||||||||| ||||||| |||||||||||||||    
T  22882352 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 22934016 - 22934086
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||||||| |||| |||| |||||||  |||||||||||||| ||||||| |||||||||||||||    
T  22934016 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22934086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 17356206 - 17356256
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgat 108  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  17356206 ttagtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 14801880 - 14801827
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  14801880 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 34765664 - 34765717
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  34765664 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 34765717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 41583518 - 41583583
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaa 126  Q
    |||||||| |||| |||||||||| ||||||||||||| |||||||||||| |||| || ||||||    
T  41583518 gtgacgtggcagtgattaagtgagaagagggacgaaattttaaatgattaacttttgcaggggcaa 41583583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 10781768 - 10781822
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    ||||||||||||||||  |||| || ||||||||||||||| |||||||||||||    
T  10781768 ttagtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaat 10781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 16605746 - 16605692
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    ||||||||||| |||| |||||||| || |||||||||||| |||||||||||||    
T  16605746 ttagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaat 16605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 24349818 - 24349764
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    ||||||||||| |||| ||||| || ||||||||||||||| |||||||||||||    
T  24349818 ttagtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaat 24349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 50418928 - 50418974
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  50418928 cgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 50418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 9254476 - 9254411
Alignment:
Q  132 gaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    ||||||||||||| |||  |||||||  ||||||| |||||| ||||||| |||||||||||||||    
T  9254476 gaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 9254411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 35028282 - 35028335
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| |||||| |||||||| ||||||||||||    
T  35028282 ttagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 35028335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 40387608 - 40387543
Alignment:
Q  61 gtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaa 126  Q
    |||||||| |||| |||||||||| ||||| ||||||| |||||||||||| |||| || ||||||    
T  40387608 gtgacgtggcagtgattaagtgagaagaggaacgaaattttaaatgattaacttttgcaggggcaa 40387543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 52298169 - 52298112
Alignment:
Q  59 tagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    |||||||||| |||| |||||||| |||||| |||||||| |||||||||||| ||||    
T  52298169 tagtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 53701956 - 53701903
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||| ||||| ||||||||||||    
T  53701956 ttagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaa 53701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 4982986 - 4983033
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  4982986 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaat 4983033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 12691689 - 12691796
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||  | ||| |||||||||||  |||| ||  |||| |||||||||||||| ||||||| | ||||  ||||||||| |    
T  12691689 aaatgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaacc 12691788  T
Q  202 cttttatt 209  Q
    ||||||||    
T  12691789 cttttatt 12691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 35730945 - 35731024
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| ||| | || ||||| |||||||||||  |||| || ||||| |||||||||||||| |||||||    
T  35730945 aaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 35731024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 9145026 - 9145072
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  9145026 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 13058174 - 13058128
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  13058174 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 13058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 22881242 - 22881172
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||||   ||| |||||||  ||||||| |||||| || |||| |||||||||||||||    
T  22881242 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 22932906 - 22932836
Alignment:
Q  127 aatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatattt 197  Q
    |||||||||||||||||   ||| |||||||  ||||||| |||||| || |||| |||||||||||||||    
T  22932906 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 23613446 - 23613400
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  23613446 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 27934669 - 27934623
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  27934669 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 36009104 - 36009150
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  36009104 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 42738291 - 42738337
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  42738291 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 43155787 - 43155833
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  43155787 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 43155833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 48528614 - 48528552
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagg 122  Q
    ||||| |||||||| |||||||| ||| ||| ||||||| |||||||||||| |||| |||||    
T  48528614 agtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaattttgcaagg 48528552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 49879467 - 49879513
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  49879467 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 49879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 15507957 - 15508010
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||| | |||| |||||||| |||||| |||||||| ||||||||||||    
T  15507957 ttagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaa 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 16005974 - 16005929
Alignment:
Q  66 gtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| |||||||  ||||||||||||||| ||||||||||||    
T  16005974 gtgacagtgattaagtagggagagggacgaaattttaaatgattaa 16005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 22249993 - 22249940
Alignment:
Q  135 gattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaa 188  Q
    |||||||||  |||| |||||||| |||||||||||||| ||||||| ||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 22249940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 37976437 - 37976490
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| |||||| |||||||| ||||||||||||    
T  37976437 ttagtgacatggcagtgattaagtggggagagtgacgaaattttaaatgattaa 37976490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 44967334 - 44967375
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  44967334 cagtgattaagtggggagagggacgaaattttaaatgattaa 44967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 52909397 - 52909344
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||| ||||||||| ||||||||||||    
T  52909397 ttagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaa 52909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 24711238 - 24711202
Alignment:
Q  75 attaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  24711238 attaagtggggagagggacgaaattttaaatgattaa 24711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 48507732 - 48507808
Alignment:
Q  133 aggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttttatt 209  Q
    |||||||||||  |||| || ||||| |||||||||||||| ||| ||| | ||||  | |||||||||||||||||    
T  48507732 aggattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaaaccttttatt 48507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 48529862 - 48529918
Alignment:
Q  60 agtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||||| |||| ||||||||  ||||||||| |||| |||||||||||| ||||    
T  48529862 agtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 53559671 - 53559775
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| | |||||||||  |||| || ||||| ||||||| |||||| ||||||| | ||||  ||||||||| |    
T  53559671 aaatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 53559770  T
Q  202 ctttt 206  Q
    |||||    
T  53559771 ctttt 53559775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 262439 - 262549
Alignment:
Q  100 ttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||| ||| || ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  262439 ttaaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaa 262538  T
Q  200 accttttattt 210  Q
     ||||||||||    
T  262539 gccttttattt 262549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 261101 - 261004
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || |||||||||||||||||||||||  |||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  261101 aaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaa 261004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 14656596 - 14656477
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | |||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||   |||||||||||||| |||    
T  14656596 agagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacagcctataattgcagggatg 14656497  T
Q  186 aaatgcatatttaaaccttt 205  Q
    ||| |||||||||| |||||    
T  14656496 aaaagcatatttaagccttt 14656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 4116915 - 4116797
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| |||| |||    
T  4116915 agagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatg 4116816  T
Q  186 aaatgcatatttaaacctt 204  Q
    |||  ||||||||| ||||    
T  4116815 aaaaacatatttaagcctt 4116797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 4117531 - 4117649
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| |||| |||    
T  4117531 agagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattacagggatg 4117630  T
Q  186 aaatgcatatttaaacctt 204  Q
    |||  ||||||||| ||||    
T  4117631 aaaaacatatttaagcctt 4117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 33401126 - 33401236
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||| |||||| |||||||||| |    
T  33401126 aaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaagc 33401225  T
Q  202 cttttattttt 212  Q
    || || |||||    
T  33401226 ctatttttttt 33401236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 17784385 - 17784489
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || |||||||||||||||||||||||| |||  |||||||||||||||| ||||| |||||||| |||||| |||||||||| |    
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T
Q  202 ctttt 206  Q
    |||||    
T  17784485 ctttt 17784489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 8427384 - 8427459
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatt 196  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8427384 gggcaaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatt 8427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 33400082 - 33399969
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  33400082 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 33399983  T
Q  186 aaatgcatatttaa 199  Q
    ||| ||||||||||    
T  33399982 aaaagcatatttaa 33399969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 1661414 - 1661528
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||| ||||||| |||||||||||| |||| |||||||||||||| | ||||||||| |||| |||    
T  1661414 agagggacgaactttcaaatgattagtaattacaggggtaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatg 1661513  T
Q  186 aaatgcatatttaaa 200  Q
    |||  ||||||||||    
T  1661514 aaaatcatatttaaa 1661528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 14657193 - 14657311
Alignment:
Q  86 agagggacgaaatcttaaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatg 185  Q
    ||||||||||| | | ||||||||| |  ||||| ||||||||||| |||||||||||| |||| ||| |||||||||| | |||||||||  ||| |||    
T  14657193 agagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaaggtcagggataaaaaatcaaacggcctataattatagggatg 14657292  T
Q  186 aaatgcatatttaaacctt 204  Q
    ||| |||||||||| ||||    
T  14657293 aaaagcatatttaagcctt 14657311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 8427297 - 8427203
Alignment:
Q  105 tgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    |||||||| ||| || |||||||||||||||||||||||  | || || ||||| |||||||||||||| ||||| | ||||||  |||||||||    
T  8427297 tgattaatatttgcaggggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaa 8427203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 3059401 - 3059348
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||||||||||||||||||| ||||||||||||    
T  3059401 ttagtgacatggcagtgattaagtgaggagagggacgaaattttaaatgattaa 3059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 33648749 - 33648807
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaattttt 116  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| |||| ||||||| ||||    
T  33648749 ttagtgatgtggcagtaattaagtgaggagagggaagaaattttaagtgattaaatttt 33648807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 1215150 - 1215223
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaatttttacaagggcaaaatgg 131  Q
    ||||||||||| |||| |||||||| ||| ||||||||||| |||| ||||||| ||||   ||||||||||||    
T  1215150 ttagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaattttgacagggcaaaatgg 1215223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 3299843 - 3299940
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| ||| |||| | ||| |||||||||||  |||  || ||||| |||||||||||||| ||||||| | ||||| |||||||||    
T  3299843 aaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaa 3299940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 5064435 - 5064338
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||||| |||||||||||||||  |||| || ||||| ||||||||| |||| || |||| | ||||  |||||||||    
T  5064435 aaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaa 5064338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 12080780 - 12080727
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| |||||||| ||||||||||||||| ||||||||||||    
T  12080780 ttagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 12080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 21627997 - 21628050
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| |||||||||| |||| ||||||||||||    
T  21627997 ttagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaa 21628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 33517678 - 33517625
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||  |||| |||||||| ||||||||||||||| ||||||||||||    
T  33517678 ttagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaa 33517625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 5064619 - 5064719
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| ||||| || ||||| ||||||| |||||| ||||||  | ||||  |||||||||||    
T  5064619 aaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaaac 5064718  T
Q  202 c 202  Q
    |    
T  5064719 c 5064719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 15819774 - 15819877
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaac 201  Q
    ||||||||| | ||| |||||| | | ||| |||||||||||  |||| || ||||| |||||||||||||| ||||||| | ||||  ||||||||| |    
T  15819774 aaatgattagtatttgcaagggtagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 15819873  T
Q  202 cttt 205  Q
    ||||    
T  15819874 cttt 15819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 28000645 - 28000691
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  28000645 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 30337586 - 30337540
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  30337586 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 13480308 - 13480211
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| || ||||| ||||||| |||||| ||||||| | ||||  |||||||||    
T  13480308 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 13480211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 23291844 - 23291747
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| |||||||| ||||||| |||||| ||| ||| | ||||  |||||||||    
T  23291844 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaa 23291747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 30234876 - 30234973
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || ||||| | ||| |||||||||||  |||| |||||||| |||||  ||||||| ||||||| | ||||  |||||||||    
T  30234876 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacatatttaa 30234973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 30725903 - 30725850
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||||||| || |||| ||||| || ||||||||||||||| ||||||||||||    
T  30725903 ttagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaa 30725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 30803993 - 30803952
Alignment:
Q  70 cagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||||||| ||||||||||||||| ||||||||||||    
T  30803993 cagtgattaagtggggagagggacgaaattttaaatgattaa 30803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 33647107 - 33647054
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| ||||| || |||||| |||||||| ||||||||||||    
T  33647107 ttagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaa 33647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 32337851 - 32337931
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagga 182  Q
    ||||||||||| ||| || ||||| | ||| ||||| |||||  |||| || ||||| |||||||||||||| ||||||||    
T  32337851 aaatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagga 32337931  T

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Target: scaffold1493 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 693 - 596
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||| ||| || |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  693 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaa 596  T

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Target: scaffold0018 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 73209 - 73112
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||| |||||||| ||||||| || |||||| |||| |||||| ||||||||||    
T  73209 aaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcccataattacagggatgaaaagcatatttaa 73112  T

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Target: scaffold0182 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 14400 - 14474
Alignment:
Q  125 aaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaa 199  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||| ||||||||||    
T  14400 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaggggtgaaaagcatatttaa 14474  T

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Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 13215 - 13131
Alignment:
Q  121 gggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcaggaatgaaatgcatatttaaaccttt 205  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||  ||||| || |||| |||||| |||||||||| |||||    
T  13215 gggcaaaatgggaggattactaaactcagagatgaaaaatcaaatggtctatatttacagggatgaaaagcatatttaagccttt 13131  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 69109 - 69056
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  69109 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 69056  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 37847 - 37900
Alignment:
Q  58 ttagtgacgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  37847 ttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37900  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 10953 - 10874
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| ||| |||||||||| |||||||||||  ||   || ||||| |||||||||||||| |||||||    
T  10953 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagg 10874  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 10425 - 10346
Alignment:
Q  102 aaatgattaatttttacaagggcaaaatgggaggattagtaagctcagtgatgaaaaatcaaatgacctataattgcagg 181  Q
    ||||||||||| ||| || ||||||| ||| |||||||||||  |||| || ||||| |||||||| ||||| |||||||    
T  10425 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagg 10346  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 139809 - 139762
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaat 112  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  139809 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaat 139762  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 1370 - 1324
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  1370 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 141854 - 141900
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  141854 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 1906 - 1860
Alignment:
Q  65 cgtgacagtaattaagtgaggagagggacgaaatcttaaatgattaa 111  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||    
T  1906 cgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 1860  T

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