View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4730-Insertion-13 (Length: 196)

Name: NF4730-Insertion-13
Description: NF4730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4730-Insertion-13
NF4730-Insertion-13
[»] chr7 (13 HSPs)
chr7 (8-196)||(39366012-39366200)
chr7 (8-196)||(39547474-39547662)
chr7 (8-196)||(39338659-39338847)
chr7 (20-196)||(39538028-39538204)
chr7 (9-193)||(39353505-39353689)
chr7 (9-196)||(39564254-39564441)
chr7 (21-192)||(39589315-39589486)
chr7 (14-195)||(1084816-1084998)
chr7 (12-196)||(39622074-39622258)
chr7 (20-195)||(39575076-39575251)
chr7 (42-180)||(42171837-42171975)
chr7 (21-85)||(42133023-42133087)
chr7 (151-195)||(1085062-1085105)
[»] chr1 (2 HSPs)
chr1 (21-172)||(2160857-2161008)
chr1 (41-193)||(41687667-41687819)
[»] chr4 (3 HSPs)
chr4 (21-180)||(2877208-2877367)
chr4 (45-180)||(2886975-2887110)
chr4 (45-102)||(2897266-2897323)
[»] chr2 (4 HSPs)
chr2 (21-196)||(44223164-44223339)
chr2 (21-196)||(44233986-44234161)
chr2 (50-124)||(43457586-43457660)
chr2 (21-196)||(44211002-44211177)
[»] chr3 (1 HSPs)
chr3 (20-94)||(49773249-49773323)
[»] chr8 (1 HSPs)
chr8 (53-124)||(4501297-4501368)


Alignment Details
Target: chr7 (Bit Score: 181; Significance: 5e-98; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 39366200 - 39366012
Alignment:
Q  8 aggggacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgca 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39366200 aggggacaatcggagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgca 39366101  T
Q  108 aaggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39366100 aaggtttcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 39366012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 7e-91
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 39547474 - 39547662
Alignment:
Q  8 aggggacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgca 107  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  39547474 aggggacaatcggagccatgctgaatagagcaaagattcatagacagtaacatgaggagaatggatatcagtttgctcacagtatcctgaaattcttgca 39547573  T
Q  108 aaggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39547574 aaggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagtacatccatcag 39547662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 39338847 - 39338659
Alignment:
Q  8 aggggacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgca 107  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39338847 aggggacaatcggagccatgctgaatagagcaaagattcatagacagtaacatgaggagaatggatatcagtttgctcacagtatccagaaattcttgca 39338748  T
Q  108 aaggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    ||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39338747 aaggtttcttgcttctttggaaagccggaaattttgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 39338659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 39538028 - 39538204
Alignment:
Q  20 gagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgc 119  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  39538028 gagccatgctgaatagagcaaagattcatagacagtaacataaggagaatggatatcagtttgctcacagtatcctgaaattcttgcaaaggtatcttgc 39538127  T
Q  120 ttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39538128 ttctttggatagccagaaattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 39538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 39353689 - 39353505
Alignment:
Q  9 ggggacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaa 108  Q
    |||||||| | |||||||| || |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  39353689 ggggacaaccggagccatgttggatagagcaaagattcatagacagtaacataaggagaatggatatcagtttgctcacagtatccagaaattcttgcaa 39353590  T
Q  109 aggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccat 193  Q
    |||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39353589 aggtttcttgcttttttggatagccggaaattgtgatgttcccaccaatatatccaccggtttttctaccagaaagcacatccat 39353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 39564254 - 39564441
Alignment:
Q  9 ggggacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaa 108  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  39564254 ggggacaaccggagccatgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaa 39564353  T
Q  109 aggtatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    |||| ||||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  39564354 aggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcag 39564441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 39589315 - 39589486
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  39589315 agccatgctgaatagagcaaagattcatatacagtaacatgaggagagtggatatcattttgctcacagtatccagaaattcttgcaaatgtttcttgct 39589414  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatcca 192  Q
    |||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39589415 tcttaggatatccagaaattgtgatggtcccaccaatatatccaccagtttttctaccagaaagcacatcca 39589486  T

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Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 1084816 - 1084998
Alignment:
Q  14 caatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggta 113  Q
    ||||| |||||||||||||||||| ||||| || |||||||||| ||||||||||||||||||  ||||||| ||||||||||||||||||| ||| ||     
T  1084816 caatcggagccatgctgaatagagcaaagactcgtagacagtaaaatgaggagaatggatatctatttgctcacagtatccagaaattcttgtaaatgtt 1084915  T
Q  114 tcttgc--ttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatca 195  Q
    ||||||  |||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1084916 tcttgcttttctatggatagccagaaattatgatgttcccaccaatatatccatcagtttttctaccag-aagcacatccatca 1084998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 39622074 - 39622258
Alignment:
Q  12 gacaatcagagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaagg 111  Q
    ||||||| ||||||||| ||| |||| || |||||||| |||||||||| |||||||||||||| | |||| || ||||||||| ||| |||||||||||    
T  39622074 gacaatcggagccatgccgaaaagagcaatgattcatatacagtaacataaggagaatggatataattttgttcacagtatccacaaactcttgcaaagg 39622173  T
Q  112 tatcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    | || |||||||||| ||||||||| ||||||||| |||||||||||||||| |  |||||||| ||||  || |||||||||||    
T  39622174 tttcctgcttctttgaatagccagaaattgtgatggtcccaccaatatatcctctggtttttcttccagctagtacatccatcag 39622258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 39575076 - 39575251
Alignment:
Q  20 gagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgc 119  Q
    |||||||||||||||||| ||||| |||||||| |||| ||||||||| || |||||| ||||||| |||||||| ||||||||||||||||| ||||||    
T  39575076 gagccatgctgaatagagcaaagactcatagaccgtaatatgaggagagtgtatatcattttgctcacagtatccggaaattcttgcaaaggtttcttgc 39575175  T
Q  120 ttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatca 195  Q
    || || ||||  || || | |||||||||||||| ||||||||| ||| |||| ||||||| ||| ||||||||||    
T  39575176 tttttgggatgcccggaaactgtgatgttcccactaatatatcccccacttttcctaccagcaagtacatccatca 39575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 42171837 - 42171975
Alignment:
Q  42 gattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgcttctttggatagccagatattg 141  Q
    ||||||||||||||||||||||||||||| |||||| | || |||||||| |||  |||||  || || || ||||| |||||| | || || |||||      
T  42171837 gattcatagacagtaacatgaggagaatgaatatcattctgttcgcagtaaccactaattcgggcgaatgtttcttggttcttttggtaacctgatatgc 42171936  T
Q  142 tgatgttcccaccaatatatccaccagtttttctaccag 180  Q
    | || || ||  |||| ||||||||||||||||| ||||    
T  42171937 taatatttccttcaatgtatccaccagtttttcttccag 42171975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 42133023 - 42133087
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctc 85  Q
    |||||||| ||| | |||||||||||||||||||| ||||  |||||||| |||||| |||||||    
T  42133023 agccatgcagaaaatagtaaagattcatagacagttacatagggagaatgaatatcattttgctc 42133087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 1085062 - 1085105
Alignment:
Q  151 caccaatatatccaccagtttttctaccagaaagcacatccatca 195  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||    
T  1085062 caccaatgtatccatcagtttttctaccag-aagcacatccatca 1085105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 8e-26; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 2160857 - 2161008
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    |||||||| ||||| |  ||||||||||| || ||||||| ||| ||||||||||||  ||||||||| ||||| || || |  ||||| || | ||| |    
T  2160857 agccatgccgaatataacaaagattcataaactgtaacattaggtgaatggatatcaaattgctcgcaatatcccgatatgcgagcaaatgttttttgat 2160956  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttt 172  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  2160957 tctttggatagccggatattgtgatgtttccatcaatatatccaccagtttt 2161008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 41687667 - 41687819
Alignment:
Q  41 agattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgcttctttggatagccagatatt 140  Q
    |||||||||||| |||| ||  ||||| || |||||  |||| || |||||||||   |||| |||||| ||  |||| ||||||||||| |||||||      
T  41687667 agattcatagactgtaagatttggagagtgaatatcgttttgttcacagtatccactgattcgtgcaaaagttgcttggttctttggataaccagatacg 41687766  T
Q  141 gtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccat 193  Q
     | ||| ||||  ||||||| |||||||||||||| |||| ||| ||||||||    
T  41687767 ctaatgctcccttcaatataaccaccagtttttcttccagcaagaacatccat 41687819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 2877367 - 2877208
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    ||||| |||||||| ||||| || |||||||||||||| ||||| || ||||||||| | ||||| || || ||||| ||||| ||||| || |||||||    
T  2877367 agccaagctgaatacagtaaggactcatagacagtaacttgaggggagtggatatcattctgctcacaatagccagagattctagcaaatgtttcttgct 2877268  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccag 180  Q
    | || || || ||||| ||| | ||| ||||| ||||||| |||| |||||| |||||||    
T  2877267 ttttagggtaaccagaaatttttatgctcccatcaatataaccactagttttcctaccag 2877208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 2887110 - 2886975
Alignment:
Q  45 tcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgcttctttggatagccagatattgtga 144  Q
    ||||||||||||||||||||||||||||||||| | ||||| || || ||||| ||||  ||||| || ||||| || || || || ||||| ||| | |    
T  2887110 tcatagacagtaacatgaggagaatggatatcattctgctcacaataaccagagattcgagcaaacgtttcttgttttttagggtacccagaaattttta 2887011  T
Q  145 tgttcccaccaatatatccaccagtttttctaccag 180  Q
    || ||||  ||||||| ||||||||||| |||||||    
T  2887010 tgctcccgtcaatataaccaccagttttcctaccag 2886975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 2897266 - 2897323
Alignment:
Q  45 tcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattc 102  Q
    ||||||||||||||||||||||||||||||||| | ||||| || || ||||| ||||    
T  2897266 tcatagacagtaacatgaggagaatggatatcattctgctcacaataaccagagattc 2897323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 44223164 - 44223339
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    ||||| || ||||| || ||||| ||||| || |||||||| || |||||||||||| | ||||| ||||| ||||||||||| ||||| || |||||||    
T  44223164 agccacgccgaataaagcaaagactcataaactgtaacatgcggtgaatggatatcattctgctcacagtagccagaaattctagcaaatgtttcttgct 44223263  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    | || || || ||||| |   ||||||  ||| ||||||||||||| ||||| |||||||  || |||||||||||    
T  44223264 ttttagggtacccagaaaccttgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcag 44223339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 44233986 - 44234161
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    ||||| ||||| || || ||||| ||||| || ||||||||||| |||||||||||| | ||||| ||||| || || ||||| ||||| || |||||||    
T  44233986 agccacgctgagtaaagcaaagactcataaactgtaacatgaggtgaatggatatcattctgctcacagtaaccggagattctagcaaatgtttcttgct 44234085  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    | || ||||| ||||| |   ||||||  ||| ||||||||||||| ||||| |||||||  || |||||||||||    
T  44234086 ttttaggatacccagaaaccttgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcag 44234161  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 43457586 - 43457660
Alignment:
Q  50 gacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgcttctt 124  Q
    ||||||||| || || ||||||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||    
T  43457586 gacagtaacttgtggtgaatggatatcggtttgttcgcagtatccagaaattcttgcaaatgtttcttgattctt 43457660  T

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Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 44211002 - 44211177
Alignment:
Q  21 agccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgct 120  Q
    ||||||||||| || || |  |||||||| || ||||||||||| ||||| |||||| | || || ||||| ||||| ||||| ||||| || |||||||    
T  44211002 agccatgctgagtaaagaagggattcataaactgtaacatgaggtgaatgaatatcattctgttcacagtagccagatattctagcaaatgtttcttgct 44211101  T
Q  121 tctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctaccagaaagcacatccatcag 196  Q
    | || || || ||||| |   ||||||  ||| ||||||||||||| ||||| |||||||  || |||||||||||    
T  44211102 ttttagggtacccagaaaccttgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcag 44211177  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 49773323 - 49773249
Alignment:
Q  20 gagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcagtttgctcgcagtatcc 94  Q
    ||||||||| ||||| |  | ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  49773323 gagccatgcagaataaacaagagattcatagacagtaacatggggagagtggatatcagtttgctcacagtatcc 49773249  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 4501368 - 4501297
Alignment:
Q  53 agtaacatgaggagaatggatatcagtttgctcgcagtatccagaaattcttgcaaaggtatcttgcttctt 124  Q
    |||||| ||||| ||||| ||||||||||| || || || ||||||| |||||||||||| ||||| |||||    
T  4501368 agtaacttgaggtgaatgaatatcagtttgttcacaataaccagaaactcttgcaaaggtttcttggttctt 4501297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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