View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4730_high_10 (Length: 333)
Name: NF4730_high_10
Description: NF4730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4730_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 36422680 - 36423005
Alignment:
| Q |
1 |
ttcaacaaagaagctctagactgcaacatcttctctggatggtgcacctcaaagaaccgttttcaatcttcaaatccaatccacaaaccatccttctcca |
100 |
Q |
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| T |
36422680 |
ttcaacaaagaagctctagactgcaacatcttctctggatggtgcacctcaaagaaccgttttcaatcttcaaatccaatccacaaaccatccttctcca |
36422779 |
T |
|
| Q |
101 |
ctcgccatcaacaaccaa-ccatgaatccgatgaacctcgccaccctttagaccctctaaccatccaagaattcaacaaagttcgtgcgatcctctcgac |
199 |
Q |
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|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36422780 |
ctcgccgtcaacaaccaaaccatgaatccgatgaacctcgccaccctttagaccctctaaccatccaagaattcaacaaagttcgtgcgatcctctcgac |
36422879 |
T |
|
| Q |
200 |
acaccctctttttaagtcctcaaacagttacactctcaattccattgttctagaagaaccagacaaagaacttgtcctcaaatggaaaaatggtcaacca |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36422880 |
acaccctctttttaagtcctcaaacagttacactctcaattccattgttctagaagaaccagacaaagaacttgtcctcaaatggaaaaatggtcaacca |
36422979 |
T |
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| Q |
300 |
ttacttcctaggaaagcctctgtggt |
325 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36422980 |
ttacttcctaggaaagcctctgtggt |
36423005 |
T |
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