View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4731-Insertion-12 (Length: 47)
Name: NF4731-Insertion-12
Description: NF4731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4731-Insertion-12 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 42; Significance: 8e-16; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 8e-16
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 157969 - 158010
Alignment:
| Q |
6 |
cactaaattcctatctaccaaccaacaggttcagaatctatg |
47 |
Q |
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| T |
157969 |
cactaaattcctatctaccaaccaacaggttcagaatctatg |
158010 |
T |
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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 150081 - 150116
Alignment:
| Q |
12 |
attcctatctaccaaccaacaggttcagaatctatg |
47 |
Q |
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| T |
150081 |
attcctatctaccaaccaacaggttcaaaatctatg |
150116 |
T |
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