View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4731_high_19 (Length: 277)
Name: NF4731_high_19
Description: NF4731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4731_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 48231336 - 48231576
Alignment:
| Q |
18 |
ggatttaccgttgatgaaccttctgaggcatttttaatgaatgtctttaaaagtgtatgtaaaccagatggtttttaaaatgatacttttaccctttcat |
117 |
Q |
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| T |
48231336 |
ggatttaccgttgatgaaccttctgaggcatttttaatgaaagtctttaaaagtgtatgtaaaccagatggtttttaaaatgatacttttaccctttcat |
48231435 |
T |
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| Q |
118 |
ccggtataataagatgaatgtgttatttttcataaaacaggttacacaagagtcatccagagagttagtcaaggttctcgaccatagctggcgtcttgaa |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
48231436 |
ccggtataataagatgaatgtgttatttttcataaaacaggttacacaagagtcatccagagagttagtcaaggttctcgaccgtagctggcgtcttgaa |
48231535 |
T |
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| Q |
218 |
gaacaggatgcgttgaatatagcaatagtgaaagctctgat |
258 |
Q |
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| T |
48231536 |
gaacaggatgcgttgaatatagcaatagtgaaagctctgat |
48231576 |
T |
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