View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4731_high_24 (Length: 242)

Name: NF4731_high_24
Description: NF4731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4731_high_24
NF4731_high_24
[»] chr4 (56 HSPs)
chr4 (2-227)||(26521317-26521541)
chr4 (35-218)||(3329857-3330040)
chr4 (35-218)||(34107759-34107942)
chr4 (37-218)||(39001260-39001441)
chr4 (35-218)||(50000989-50001172)
chr4 (35-218)||(4419125-4419307)
chr4 (22-217)||(600756-600951)
chr4 (35-218)||(53619447-53619630)
chr4 (21-214)||(42455674-42455867)
chr4 (99-218)||(56462169-56462288)
chr4 (35-205)||(16955321-16955491)
chr4 (85-218)||(53170423-53170557)
chr4 (89-218)||(38535632-38535760)
chr4 (35-203)||(23255574-23255742)
chr4 (83-214)||(25504204-25504335)
chr4 (20-218)||(30940801-30940993)
chr4 (35-190)||(55933551-55933706)
chr4 (87-209)||(7536643-7536765)
chr4 (22-143)||(23604938-23605059)
chr4 (54-172)||(23242780-23242898)
chr4 (49-190)||(50464387-50464528)
chr4 (22-182)||(45661539-45661699)
chr4 (35-218)||(132246-132429)
chr4 (48-190)||(9601084-9601221)
chr4 (35-142)||(31846964-31847071)
chr4 (40-172)||(8738071-8738203)
chr4 (24-203)||(6865898-6866075)
chr4 (88-190)||(34213534-34213635)
chr4 (54-218)||(50463009-50463170)
chr4 (157-226)||(50483251-50483320)
chr4 (101-169)||(18981651-18981718)
chr4 (82-218)||(46440952-46441088)
chr4 (23-154)||(22449813-22449943)
chr4 (48-151)||(50442609-50442712)
chr4 (23-214)||(53098270-53098461)
chr4 (87-218)||(54190914-54191045)
chr4 (35-109)||(12917910-12917984)
chr4 (67-214)||(49354133-49354284)
chr4 (35-112)||(40392723-40392800)
chr4 (87-184)||(48657012-48657109)
chr4 (105-196)||(46391399-46391488)
chr4 (67-218)||(49344202-49344357)
chr4 (22-122)||(12053315-12053415)
chr4 (54-185)||(23233211-23233340)
chr4 (114-207)||(28739845-28739938)
chr4 (47-136)||(47585153-47585242)
chr4 (22-93)||(25931973-25932044)
chr4 (23-150)||(40005289-40005408)
chr4 (44-133)||(2852305-2852394)
chr4 (23-132)||(45760940-45761049)
chr4 (21-77)||(15785304-15785360)
chr4 (161-218)||(31847074-31847131)
chr4 (35-96)||(41372253-41372314)
chr4 (20-56)||(41945005-41945041)
chr4 (124-216)||(45386126-45386218)
chr4 (88-136)||(52022042-52022090)
[»] chr8 (38 HSPs)
chr8 (22-207)||(38815142-38815327)
chr8 (22-218)||(22589400-22589595)
chr8 (35-216)||(18804474-18804654)
chr8 (35-214)||(24124889-24125068)
chr8 (78-216)||(3187874-3188011)
chr8 (54-208)||(37514101-37514255)
chr8 (86-219)||(4699783-4699915)
chr8 (74-218)||(6592476-6592619)
chr8 (35-167)||(42659088-42659220)
chr8 (24-218)||(43823840-43824033)
chr8 (105-218)||(3821155-3821268)
chr8 (35-218)||(39434530-39434711)
chr8 (74-218)||(6618185-6618328)
chr8 (88-214)||(25021881-25022007)
chr8 (40-199)||(4073400-4073559)
chr8 (87-218)||(28196105-28196236)
chr8 (88-196)||(9259377-9259485)
chr8 (34-190)||(5329693-5329849)
chr8 (96-218)||(3863236-3863361)
chr8 (35-133)||(500103-500201)
chr8 (77-150)||(8882247-8882320)
chr8 (89-159)||(24451036-24451105)
chr8 (132-218)||(35740049-35740135)
chr8 (106-218)||(3825567-3825679)
chr8 (26-197)||(8540461-8540635)
chr8 (21-136)||(11611279-11611394)
chr8 (22-121)||(18596759-18596858)
chr8 (29-207)||(121795-121972)
chr8 (121-207)||(39671246-39671332)
chr8 (143-208)||(40223476-40223541)
chr8 (100-196)||(8115738-8115834)
chr8 (87-154)||(4066758-4066825)
chr8 (50-132)||(8227984-8228066)
chr8 (94-150)||(6792189-6792245)
chr8 (23-130)||(24320186-24320293)
chr8 (21-126)||(8619669-8619774)
chr8 (21-66)||(31150325-31150370)
chr8 (35-107)||(44337201-44337272)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-218)||(102954-103150)
[»] chr3 (42 HSPs)
chr3 (34-223)||(39583287-39583476)
chr3 (22-218)||(32546643-32546839)
chr3 (22-218)||(53785557-53785753)
chr3 (35-218)||(26772619-26772802)
chr3 (35-218)||(44198628-44198811)
chr3 (22-218)||(52741575-52741771)
chr3 (51-208)||(26856835-26856992)
chr3 (35-198)||(44694-44860)
chr3 (22-218)||(4472910-4473105)
chr3 (35-218)||(38670943-38671126)
chr3 (40-218)||(37133062-37133240)
chr3 (87-218)||(3443375-3443506)
chr3 (87-218)||(38145969-38146100)
chr3 (35-209)||(21552525-21552703)
chr3 (35-186)||(4763888-4764038)
chr3 (35-218)||(38978862-38979045)
chr3 (89-218)||(5338561-5338687)
chr3 (35-226)||(25324891-25325081)
chr3 (86-218)||(13582422-13582554)
chr3 (35-218)||(49017828-49018007)
chr3 (71-189)||(52411983-52412101)
chr3 (91-214)||(54508451-54508574)
chr3 (54-151)||(4669793-4669890)
chr3 (26-172)||(3643005-3643149)
chr3 (87-214)||(37992246-37992372)
chr3 (80-182)||(7257655-7257757)
chr3 (40-218)||(25094635-25094809)
chr3 (22-183)||(46940871-46941032)
chr3 (87-214)||(7502079-7502204)
chr3 (88-218)||(7900772-7900902)
chr3 (22-178)||(8591989-8592144)
chr3 (67-154)||(26393813-26393900)
chr3 (67-188)||(42205960-42206081)
chr3 (121-204)||(51234563-51234646)
chr3 (87-181)||(32690966-32691060)
chr3 (87-136)||(26276528-26276577)
chr3 (174-214)||(3376808-3376848)
chr3 (114-218)||(43123085-43123189)
chr3 (77-145)||(53502590-53502658)
chr3 (86-141)||(50446177-50446232)
chr3 (78-139)||(3376880-3376941)
chr3 (22-62)||(5338513-5338553)
[»] chr7 (47 HSPs)
chr7 (22-218)||(21326901-21327097)
chr7 (22-218)||(45613905-45614101)
chr7 (35-213)||(4501120-4501298)
chr7 (47-218)||(19277164-19277337)
chr7 (87-218)||(48539094-48539225)
chr7 (35-218)||(28517350-28517533)
chr7 (39-206)||(5825138-5825305)
chr7 (87-218)||(24527502-24527633)
chr7 (22-216)||(982797-982991)
chr7 (88-218)||(27521385-27521515)
chr7 (47-217)||(22197860-22198029)
chr7 (47-217)||(22239792-22239961)
chr7 (36-218)||(40726543-40726725)
chr7 (88-214)||(43856788-43856914)
chr7 (105-218)||(10905049-10905162)
chr7 (35-168)||(45003010-45003143)
chr7 (35-210)||(25187002-25187177)
chr7 (87-218)||(30216121-30216252)
chr7 (23-207)||(9281205-9281394)
chr7 (23-207)||(9292176-9292365)
chr7 (88-221)||(41117830-41117963)
chr7 (87-216)||(42295249-42295378)
chr7 (49-196)||(34772657-34772804)
chr7 (87-197)||(5972300-5972410)
chr7 (70-218)||(23792908-23793056)
chr7 (35-149)||(45974731-45974845)
chr7 (86-197)||(23037457-23037568)
chr7 (87-153)||(27027758-27027824)
chr7 (86-218)||(32584512-32584645)
chr7 (88-207)||(5714954-5715072)
chr7 (23-68)||(2520934-2520979)
chr7 (26-147)||(2904233-2904353)
chr7 (87-170)||(43333941-43334024)
chr7 (79-161)||(38839231-38839313)
chr7 (35-108)||(38766185-38766258)
chr7 (54-141)||(29054729-29054816)
chr7 (111-214)||(36558935-36559037)
chr7 (22-121)||(30659724-30659825)
chr7 (116-190)||(44525927-44526001)
chr7 (114-203)||(6635041-6635130)
chr7 (157-213)||(2904348-2904404)
chr7 (40-172)||(31889588-31889720)
chr7 (47-126)||(32336285-32336359)
chr7 (124-167)||(38766259-38766302)
chr7 (35-98)||(38832163-38832226)
chr7 (87-146)||(41071736-41071795)
chr7 (158-207)||(23890253-23890302)
[»] chr1 (42 HSPs)
chr1 (35-209)||(21472864-21473038)
chr1 (35-218)||(22346756-22346939)
chr1 (35-210)||(24177582-24177757)
chr1 (22-218)||(28041190-28041386)
chr1 (88-218)||(34644480-34644610)
chr1 (47-216)||(2898575-2898744)
chr1 (40-218)||(20259860-20260038)
chr1 (85-218)||(45659711-45659842)
chr1 (35-171)||(868513-868647)
chr1 (35-136)||(5453956-5454057)
chr1 (34-151)||(30688417-30688534)
chr1 (35-218)||(7213104-7213294)
chr1 (35-218)||(31737386-31737568)
chr1 (77-207)||(2764382-2764512)
chr1 (47-146)||(4611062-4611161)
chr1 (110-216)||(38731545-38731651)
chr1 (39-216)||(47459548-47459724)
chr1 (24-190)||(35387747-35387906)
chr1 (35-126)||(1114023-1114114)
chr1 (100-218)||(4862052-4862170)
chr1 (134-218)||(29169856-29169940)
chr1 (22-121)||(19035327-19035426)
chr1 (35-194)||(48841169-48841328)
chr1 (22-216)||(50161485-50161683)
chr1 (112-204)||(18616230-18616322)
chr1 (35-135)||(28493477-28493577)
chr1 (87-148)||(45835319-45835380)
chr1 (35-143)||(6790800-6790909)
chr1 (77-153)||(21934280-21934357)
chr1 (22-143)||(29170322-29170443)
chr1 (113-208)||(50314697-50314791)
chr1 (22-71)||(6590840-6590889)
chr1 (22-101)||(894105-894184)
chr1 (88-151)||(13181118-13181181)
chr1 (40-167)||(40515989-40516115)
chr1 (34-149)||(25375961-25376078)
chr1 (128-218)||(37932280-37932370)
chr1 (83-141)||(51067195-51067252)
chr1 (77-129)||(7483787-7483839)
chr1 (100-172)||(11128363-11128435)
chr1 (174-218)||(16500034-16500078)
chr1 (146-218)||(42919832-42919904)
[»] chr2 (44 HSPs)
chr2 (35-218)||(13413212-13413395)
chr2 (35-218)||(41867971-41868153)
chr2 (22-218)||(17344486-17344682)
chr2 (35-218)||(4413129-4413312)
chr2 (47-218)||(9685478-9685649)
chr2 (35-204)||(18745031-18745200)
chr2 (35-218)||(28224861-28225044)
chr2 (70-218)||(7760908-7761056)
chr2 (22-207)||(5532270-5532453)
chr2 (106-218)||(44686348-44686460)
chr2 (87-218)||(19161846-19161977)
chr2 (35-167)||(27494172-27494304)
chr2 (85-191)||(27502273-27502379)
chr2 (87-208)||(3825639-3825760)
chr2 (23-218)||(13147163-13147357)
chr2 (88-197)||(16351928-16352037)
chr2 (35-119)||(3208406-3208490)
chr2 (86-210)||(2886686-2886810)
chr2 (47-179)||(23485038-23485171)
chr2 (131-218)||(20142788-20142875)
chr2 (86-197)||(32029170-32029281)
chr2 (132-226)||(34814874-34814967)
chr2 (86-184)||(44684955-44685053)
chr2 (23-115)||(30602338-30602430)
chr2 (25-111)||(41702123-41702209)
chr2 (87-191)||(11921300-11921398)
chr2 (35-120)||(42122678-42122763)
chr2 (22-142)||(15515286-15515406)
chr2 (115-218)||(33612610-33612711)
chr2 (24-127)||(2626001-2626104)
chr2 (88-207)||(44720236-44720355)
chr2 (85-183)||(1296175-1296273)
chr2 (88-214)||(8036549-8036677)
chr2 (99-163)||(20142872-20142935)
chr2 (22-60)||(10587176-10587214)
chr2 (22-107)||(20143119-20143204)
chr2 (91-168)||(24765178-24765255)
chr2 (87-179)||(3262244-3262336)
chr2 (100-208)||(29808001-29808109)
chr2 (74-169)||(10296638-10296733)
chr2 (88-133)||(2888404-2888449)
chr2 (121-218)||(2888463-2888560)
chr2 (91-168)||(24762900-24762977)
chr2 (35-115)||(34250153-34250233)
[»] chr6 (25 HSPs)
chr6 (35-218)||(17249368-17249551)
chr6 (47-210)||(959454-959616)
chr6 (35-218)||(33220774-33220957)
chr6 (40-166)||(3137362-3137488)
chr6 (89-218)||(4206659-4206788)
chr6 (47-218)||(34304369-34304540)
chr6 (89-218)||(4165985-4166114)
chr6 (85-193)||(32115629-32115737)
chr6 (22-151)||(34168769-34168897)
chr6 (100-207)||(29338153-29338260)
chr6 (40-190)||(28009078-28009228)
chr6 (35-208)||(28625792-28625964)
chr6 (86-207)||(34554351-34554471)
chr6 (35-219)||(357779-357962)
chr6 (139-218)||(45740-45819)
chr6 (35-134)||(7749342-7749441)
chr6 (35-151)||(28543258-28543374)
chr6 (99-214)||(24016262-24016377)
chr6 (87-214)||(26225646-26225773)
chr6 (25-218)||(3714768-3714961)
chr6 (87-207)||(13398256-13398376)
chr6 (142-218)||(34415404-34415480)
chr6 (106-189)||(7200627-7200710)
chr6 (47-108)||(749501-749562)
chr6 (100-144)||(30514135-30514179)
[»] chr5 (39 HSPs)
chr5 (35-218)||(35310309-35310492)
chr5 (23-208)||(32269870-32270054)
chr5 (35-218)||(430463-430646)
chr5 (22-218)||(42921546-42921741)
chr5 (35-218)||(13166973-13167156)
chr5 (88-203)||(22188733-22188848)
chr5 (23-218)||(37873701-37873897)
chr5 (54-182)||(2566194-2566322)
chr5 (35-207)||(25663106-25663278)
chr5 (33-170)||(23023454-23023591)
chr5 (35-218)||(27336556-27336737)
chr5 (44-200)||(34335207-34335363)
chr5 (47-218)||(15292089-15292259)
chr5 (21-170)||(24113422-24113571)
chr5 (102-207)||(38875567-38875671)
chr5 (35-218)||(33692118-33692298)
chr5 (22-218)||(15832910-15833103)
chr5 (22-208)||(15809897-15810081)
chr5 (99-209)||(26212655-26212765)
chr5 (87-206)||(14423600-14423714)
chr5 (88-190)||(23423962-23424064)
chr5 (53-154)||(15506742-15506843)
chr5 (82-204)||(27294346-27294468)
chr5 (95-218)||(7716105-7716225)
chr5 (89-182)||(22819737-22819830)
chr5 (53-121)||(11005757-11005825)
chr5 (86-218)||(26010277-26010408)
chr5 (88-196)||(8100468-8100574)
chr5 (100-188)||(19260230-19260318)
chr5 (86-138)||(34475953-34476005)
chr5 (139-210)||(41343509-41343581)
chr5 (35-117)||(2917524-2917607)
chr5 (35-126)||(12033292-12033383)
chr5 (21-72)||(35993302-35993353)
chr5 (22-65)||(39231649-39231692)
chr5 (106-172)||(3114249-3114315)
chr5 (100-189)||(27355717-27355806)
chr5 (40-172)||(16017039-16017171)
chr5 (23-75)||(33466955-33467007)
[»] scaffold0148 (1 HSPs)
scaffold0148 (35-210)||(33111-33286)
[»] scaffold0490 (1 HSPs)
scaffold0490 (119-218)||(6279-6378)
[»] scaffold1768 (1 HSPs)
scaffold1768 (35-218)||(247-430)
[»] scaffold0470 (1 HSPs)
scaffold0470 (74-218)||(7503-7646)
[»] scaffold0110 (1 HSPs)
scaffold0110 (22-167)||(47634-47779)
[»] scaffold0119 (1 HSPs)
scaffold0119 (85-218)||(16017-16149)
[»] scaffold0031 (1 HSPs)
scaffold0031 (46-178)||(49287-49419)
[»] scaffold0406 (1 HSPs)
scaffold0406 (40-123)||(6754-6837)
[»] scaffold0309 (1 HSPs)
scaffold0309 (35-126)||(5185-5276)
[»] scaffold0514 (1 HSPs)
scaffold0514 (94-150)||(4378-4434)
[»] scaffold0186 (1 HSPs)
scaffold0186 (142-218)||(10329-10404)
[»] scaffold0361 (1 HSPs)
scaffold0361 (48-143)||(17415-17510)
[»] scaffold0013 (1 HSPs)
scaffold0013 (70-135)||(52663-52727)
[»] scaffold0224 (1 HSPs)
scaffold0224 (146-218)||(18427-18499)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 26521317 - 26521541
Alignment:
Q  2 catttaaaatcaaaaagaaaatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaa 101  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  26521317 catttaaaatcaaacagaaaatatatatcaaggattacttacacatggatagaaggcaagcggacaaaaagctgtgccgctaaacctttttggatgacaa 26521416  T
Q  102 aaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgc 201  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26521417 aaccaatcctcgtaaacacaaca-tcatgggcctaggatacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgc 26521515  T
Q  202 taggaaaccaaaagtgttgaaagcat 227  Q
    ||||||||||||||||||||||||||    
T  26521516 taggaaaccaaaagtgttgaaagcat 26521541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 3329857 - 3330040
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||| ||||||| |||||||||| ||| ||| || |||| || ||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  3329857 attacttacacgtgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcatcgtaaacacagcattcatggacc 3329956  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||||||| |||| |||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  3329957 taggagacataacattgctatgcataaccctttggactctatgtagaaggtcaactgcctctgatgctaggaagccaaaagtgt 3330040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 34107942 - 34107759
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||  |||| || ||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  34107942 attatttacacttgaatagaaaacaagtgggcaacaagctgtgccgttaaacttttttggatgacaaaaccaatcctcgtgaacacaacattcatggatc 34107843  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||| || |||||||  |||||||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  34107842 taggagacataacattgttatgcatgactttttgaactctatgtagaaggtcaacagcctctggtgctaggaaatcgaaagtgt 34107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 37 - 218
Target Start/End: Original strand, 39001260 - 39001441
Alignment:
Q  37 tacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 136  Q
    ||||||||||||||||| |||||||||| ||| ||  || |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39001260 tacttacacatgaataggaggcaagcgggcaacaaactgcgccgctagacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 39001359  T
Q  137 ggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||  |||||| || |||| | |||||| ||| |||||||||||||||| ||||||| | ||||||| ||||||||||    
T  39001360 ggagacacaacattgttatgcataatcctttggactctatgtagaaggtcaactgcctctgatcctaggaagccaaaagtgt 39001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 50001172 - 50000989
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||| || |||| || | ||||||||||| ||||| ||||| |||||||||||||||| ||||| |    
T  50001172 attacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagatctttttggatggcaaaatcaatcttcgtaaacacaacatttatggatc 50001073  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||||||| |||| |||||||| ||| |||||||||||||||| ||||||| |||||| || ||||||||||    
T  50001072 taggagacataacattgctatgcataaccctttggactatatgtagaaggtcaactgcctctgatgctagaaagccaaaagtgt 50000989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 4419125 - 4419307
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||| ||||||||||| |||||||||| ||| ||| || |||| || |  |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  4419125 attacttgcacatgaataggaggcaagcgggcaacaagctgcgccgctagat-tttttggatggcaaaaccaatcatcgtaaacacaacattcatggacc 4419223  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||| || |||| |||||||||||| ||||||||||||||||| |||||| ||||| ||| || |||||||    
T  4419224 taggagacataacattgttatgcataaccctttgaactctatgtagaaggtcaacaacctctgatgctacgaagccgaaagtgt 4419307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 600951 - 600756
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||||||||| ||| |  | || || || |||||||||| |||||| |||| |||||||||||    
T  600951 atatatataaacaattatttacacttgaatagaaggcaagcggacaacaagctacgtcgctatacatttttggatggcaaaactaatcatcgtaaacaca 600852  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtg 217  Q
     |||| |||||||||||||||||||||| | ||  ||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||    
T  600851 gcattaatggacctaggagacatgacatagttatacatgaccttttgaactctatgtagaaggtcaacaacctctggtgttaggaaaccgaaagtg 600756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 53619447 - 53619630
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| ||| |||  | ||| ||| || |||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  53619447 attacttacacatgaataggaggtaagtaggcaacaagctgcgccgctagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacc 53619546  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    || ||||||| |||||| || |||| |||||||  ||| |||||||||||||||| ||||||| |||||||||  |||||||||    
T  53619547 taagagacataacattgttatgcataaccctttagactctatgtagaaggtcaactgcctctgatgctaggaagtcaaaagtgt 53619630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 42455867 - 42455674
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacac 120  Q
    |||||||||||||||| | ||||| ||||||||||||||||||  ||| ||||||||| | |||||||||||| ||||||||  |||| |||||||| ||    
T  42455867 aatatatatcaaagataaattacatatgaatagaaggcaagcgagcaacaagttgtgctgctaaacctttttgaatgacaaagtcaattctcgtaaaaac 42455768  T
Q  121 aacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    ||||||||||||||||| | ||||||||||| ||  ||||| | |||||||| |||||||||||| |||| ||||| |  ||||||| ||||||    
T  42455767 aacattcatggacctagaaaacatgacattgttatccatgatcatttgaactctatgtagaaggttaacaacctctagcactaggaagccaaaa 42455674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 56462288 - 56462169
Alignment:
Q  99 caaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctgg 198  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||  | |||||| |||||||||| ||||||||||||||||| |||||||    
T  56462288 caaaaccaattctcgtaaacacaacatttatggacttaggagacatgacattgtcatgcatgatcctttgaactctatgtagaaggtcaacaacctctgg 56462189  T
Q  199 tgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||    
T  56462188 tgctaggaaaccaaaagtgt 56462169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 16955321 - 16955491
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||| |||||||||||||||||| ||  || | |||   | |||||| |||| | ||| ||||||||||||||||||||||||||| ||    
T  16955321 attatttacacttgagtagaaggcaagcggacaacaaactgcgtcgtcggatcttttttgatggccaaatcaatcctcgtaaacacaacattcatgggcc 16955420  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctagg 205  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||||||||| || ||||||||||||||    
T  16955421 taggagacatgacattgctatgcatgaccttttgaactctatgtagaaggtcagcaacctctggtgctagg 16955491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 53170423 - 53170557
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta--ggagacatgacattgctacgcatgaccctttgaactgtatgtagaa 182  Q
    |||||||| |||  ||||| |||||||||| ||||||||||||||| |||||  |||||||||||||||||| |||||||| |||||||| |||||||||    
T  53170423 acctttttagatagcaaaatcaatcctcgtgaacacaacattcatg-acctataggagacatgacattgctatgcatgaccttttgaactctatgtagaa 53170521  T
Q  183 ggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||||| ||||| |||||||    
T  53170522 ggtcaacagcctctggtgctagcaaaccgaaagtgt 53170557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 38535760 - 38535632
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaa 188  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||| ||||||||| |||||||| ||| ||    
T  38535760 ttttggatg-caaaactaatcctcgtaaacacaacatccatggacctataagacatgacattgctatgcatgactctttgaactctatgtagagggtgaa 38535662  T
Q  189 cagcctctggtgctaggaaaccaaaagtgt 218  Q
    || ||||||||||||||||  |||||||||    
T  38535661 caacctctggtgctaggaagtcaaaagtgt 38535632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 23255574 - 23255742
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||| ||| |||||||| ||| |||||||||| ||| || |||| || || ||| |||||| ||||| |||||||||||||||||| ||||||||||     
T  23255574 attactcacatatgaataggaggtaagcggacaacaagctgcgccgctagacttttctggatggcaaaatcaatcctcgtaaacacaatattcatggact 23255673  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgcta 203  Q
    |||||||||| |||||| || |||| |||||||| ||| |||||||||||||||| |||| || |||||    
T  23255674 taggagacataacattgttatgcataaccctttggactctatgtagaaggtcaactgcctatgatgcta 23255742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 25504204 - 25504335
Alignment:
Q  83 aaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaa 182  Q
    ||||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||||||| ||| |||| ||| || ||    
T  25504204 aaacctttttgaatggcaaaagcaatcctcataaacacaatattcatggacctatgagacatgacattactatgcatgaccttttaaactctatttaaaa 25504303  T
Q  183 ggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    ||||||||| |||| |||||||||||||||||    
T  25504304 ggtcaacagtctctagtgctaggaaaccaaaa 25504335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 30940993 - 30940801
Alignment:
Q  20 aaatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaaca 119  Q
    |||||||||| ||  |||| |||||| |||||||||||||||||| ||| ||| || | || || ||||||||||||| ||||| |||||||| | ||||    
T  30940993 aaatatatataaaccattatttacacttgaatagaaggcaagcgggcaacaagctgcgtcgctagacctttttggatggcaaaatcaatcctcatgaaca 30940894  T
Q  120 caacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||||||| | ||||||||| || |||||||| |||||||| |||||||      ||||||||| |||||||||||| | |||||||    
T  30940893 caacattcatagacctaggatatatgacattgttatgcatgaccttttgaactctatgtag------aacagcctcaggtgctaggaaatcgaaagtgt 30940801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 190
Target Start/End: Complemental strand, 55933706 - 55933551
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||| ||||||||||| |||||||||||||| ||  || | || || || |||||||||| ||||| ||||| |||||||||||||||||| |||||    
T  55933706 attacttgcacatgaataggaggcaagcggacaacaaactgcgtcgctagacttttttggatggcaaaatcaatcatcgtaaacacaacattcacggacc 55933607  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    |||||||||| | |||| || | || |||||||| ||| |||||||||||||||||    
T  55933606 taggagacataatattgttatgtataaccctttggactctatgtagaaggtcaaca 55933551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 7536765 - 7536643
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||||||| |||||||||||| | ||||||| |||||||||||| ||| ||||||| | ||||||| ||| || | |||||||| |||||||||||||    
T  7536765 ctttttggatcacaaaaccaatcattgtaaacataacattcatggatctacgagacataaaattgctatgcacgatcatttgaactctatgtagaaggtc 7536666  T
Q  187 aacagcctctggtgctaggaaac 209  Q
    |||| ||||||||||||||||||    
T  7536665 aacaacctctggtgctaggaaac 7536643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 23604938 - 23605059
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||| |||||| |||| || ||||||||||||||||||| ||||||||   ||||||    
T  23604938 atatatatcaatgattatttacacatgaatagaagacaaccggacaacaagttgcgccgctagacctttttggatgacaaaatcaatcctcaacaacaca 23605037  T
Q  122 acattcatggacctaggagaca 143  Q
    | ||||||||| ||||||||||    
T  23605038 atattcatggatctaggagaca 23605059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 23242780 - 23242898
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    |||||||||| |||| |||||||||||||| | |||||||||| |||||| ||||| |||||||||||| ||| ||||||||| |||| ||||||||| |    
T  23242780 aaggcaagcgaacaataagttgtgccgttagagctttttggataacaaaatcaatcatcgtaaacacaatatttatggacctaagagaaatgacattgtt 23242879  T
Q  154 acgcatgaccctttgaact 172  Q
    | |||||||||||| ||||    
T  23242880 atgcatgaccctttaaact 23242898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 50464528 - 50464387
Alignment:
Q  49 aatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgaca 148  Q
    |||||||||||||||||||| ||| || |||| ||   ||||||||||| |||||  ||||||||||||||||||||||||  |  | ||||||||||||    
T  50464528 aatagaaggcaagcggacaacaagctgcgccgctaggtctttttggatggcaaaataaatcctcgtaaacacaacattcatatatttgggagacatgaca 50464429  T
Q  149 ttgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    ||| || |||||||||||| |||| || ||||||||||||||    
T  50464428 ttgttatgcatgaccctttaaactctacgtagaaggtcaaca 50464387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 45661539 - 45661699
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| ||||| ||||| |||| |||||||||||||  ||| ||  ||| ||||||   ||||||||||   ||||||||||||||||||||||    
T  45661539 atatatatcaacgattaattacatatgagtagaaggcaagcgtgcaacaaactgtaccgttaggtctttttggatagtaaaaccaatcctcgtaaacaca 45661638  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaa 182  Q
    | ||||||||||||| |||  ||||||||| |  | ||||||||||||||| |||||||||    
T  45661639 atattcatggacctacgagttatgacattgttgtgtatgaccctttgaactttatgtagaa 45661699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 132246 - 132429
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||| ||||||||||||||||||||  || ||| ||  |||||| |||||||| ||||| |||| | || || |||||||||||| ||||| |||    
T  132246 attacttacgcatgaatagaaggcaagcggggaacaagctgcaccgttatacctttttagatgataaaatcgattcttgtaaacacaacaatcatgaacc 132345  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||  ||||||||||||| || || ||||||||| |||| | ||||||| |||||||  ||||| |  ||||||||| |||||||    
T  132346 taaaagacatgacattgttatgcttgaccctttaaactctgtgtagaatgtcaacaatctctgatattaggaaaccgaaagtgt 132429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 9601084 - 9601221
Alignment:
Q  48 gaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgac 147  Q
    ||||||||| ||||||||||| |||||| |||||||| | |||||||||||||||| ||||||||||||||||| || | ||| ||||||||| ||||||    
T  9601084 gaatagaagacaagcggacaacaagttgcgccgttaagc-tttttggatgacaaaatcaatcctcgtaaacacaccacttatgaacctaggagtcatgac 9601182  T
Q  148 attgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    |    |  ||| |||||||| |||| |||||||||||||||||    
T  9601183 a----tgtgcacgaccctttaaactttatgtagaaggtcaaca 9601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 31846964 - 31847071
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||  || |||| || ||||||||||||| || ||| ||||||||  |||||||||||||||||||    
T  31846964 attacttacacatgaataggaggcaagcgggcaacaacctgcgccgctagacctttttggatggcataacgaatcctcgctaacacaacattcatggacc 31847063  T
Q  135 taggagac 142  Q
    ||||||||    
T  31847064 taggagac 31847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 8738071 - 8738203
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    ||||||||||||  |||| ||||||| || ||  || |||| ||||| |||||||||||||||| ||||| | ||| |||||||||||||| ||||| ||    
T  8738071 ttacacatgaatgaaaggtaagcggataacaaactgcgccgctaaacttttttggatgacaaaatcaatctttgtatacacaacattcatgaacctaaga 8738170  T
Q  140 gacatgacattgctacgcatgaccctttgaact 172  Q
    |||||||||||  || |||||| ||||||||||    
T  8738171 gacatgacatttttatgcatgagcctttgaact 8738203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 6866075 - 6865898
Alignment:
Q  24 atatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac 123  Q
    ||||||||| |||||||||||||||||||||||  ||   ||||| |||||||| || || ||||||||| | |  |||| |||||   |||| || |||    
T  6866075 atatatcaatgattacttacacatgaatagaagataaaaagacaacaagttgtgtcgctagacctttttgaaaggtaaaatcaatctatgtaa-cagaac 6865977  T
Q  124 attcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgcta 203  Q
    ||||||| | ||||||||||||||||||||| |||| |||||||||||| |||||| ||||| |||| | ||| ||||||    
T  6865976 attcatg-atctaggagacatgacattgctatgcattaccctttgaactctatgtaaaaggttaacaacatctagtgcta 6865898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 34213534 - 34213635
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||| |||||||| |  |||||| || ||||||||||||||||| ||| ||||||||||    
T  34213534 ttttcggatggcaaaaccgatccttgtaaacacaacattcatggaactaggagaga-cacattgttaggcatgaccctttgaactctatctagaaggtca 34213632  T
Q  188 aca 190  Q
    |||    
T  34213633 aca 34213635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 50463170 - 50463009
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    ||||||||||||||  ||| || |||| ||   ||||||||||| |||||| |||||||||||||||||   ||||  || | ||||||||| ||||| |    
T  50463170 aaggcaagcggacagcaagctgcgccgctaggtctttttggatggcaaaacaaatcctcgtaaacacaa---tcatatacttgggagacatggcattgtt 50463074  T
Q  154 acgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | ||||| |||||| |||| || ||||||||||||||| ||||||||  |||||| |||||||||    
T  50463073 atgcatggccctttaaactctacgtagaaggtcaacagtctctggtgtaaggaaatcaaaagtgt 50463009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 50483320 - 50483251
Alignment:
Q  157 catgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgttgaaagca 226  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  50483320 catgaccttttgaactctatgtagaaggtcaacaacctctggtgctaggaaaccgaaagtgtcgaaagca 50483251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 18981718 - 18981651
Alignment:
Q  101 aaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttga 169  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  18981718 aaaccaatcatcgtaaacacaacattcatggaccta-gagacatgacattactatgcatgaccctttga 18981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 46441088 - 46440952
Alignment:
Q  82 taaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtaga 181  Q
    |||| |||||| |||||||||| ||||| ||||||| | ||  |||||| ||||| |||||||  |||||||| |||  |||||||| ||| ||||||||    
T  46441088 taaatctttttagatgacaaaatcaatcatcgtaaatataattttcatgaacctatgagacatagcattgctatgcacaaccctttggactctatgtaga 46440989  T
Q  182 aggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||| |||| |||| ||||||||| || |||||||    
T  46440988 aggtcagcagcttctgatgctaggaagccgaaagtgt 46440952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 22449943 - 22449813
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    ||||||||||||||| |||||||||||||||| | ||| || | || ||  || | | ||||| |||||| |||||||||| ||||| ||||||||||||    
T  22449943 tatatatcaaagattccttacacatgaatagaggacaatcgaataacaaactgcgtccttaaatctttttagatgacaaaatcaatc-tcgtaaacacaa 22449845  T
Q  123 cattcatggacctaggagacatgacattgcta 154  Q
    |||||||||| |||  ||| ||||||||||||    
T  22449844 cattcatggatctataagatatgacattgcta 22449813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 50442712 - 50442609
Alignment:
Q  48 gaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgac 147  Q
    |||| |||| ||||||| ||| ||| || |||  ||| |||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||| ||    
T  50442712 gaatggaagacaagcgggcaacaagctgcgccactaaccctttttggatggcaaaaccaatcctcttaaacacaacatccatgaacctaggagacataac 50442613  T
Q  148 attg 151  Q
    ||||    
T  50442612 attg 50442609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 53098270 - 53098461
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    ||||||||||  |||| ||||||||||||||||| ||| |   ||| ||| | |||||  |  | |||||||||   |||| |||||||||||||||||     
T  53098270 tatatatcaagaattaattacacatgaatagaagacaaacatgcaataagctatgccgcgaggcatttttggattgtaaaatcaatcctcgtaaacacag 53098369  T
Q  123 cattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
     |||| ||||| ||  || || ||||||| |  |||||||| |||||||| |||||||||||| |||| |||||| ||||||||||||||||    
T  53098370 tattcttggacataaaagtcacgacattgatgggcatgaccatttgaactctatgtagaaggttaacaacctctgatgctaggaaaccaaaa 53098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 54191045 - 54190914
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||  ||||||||||| | ||||| |||| ||| |||||| || ||| |||||||||| || ||||| ||||||||||| ||||| |||||||    
T  54191045 ctttttggatagcaaaaccaatctttgtaaatacaatatttatggacttaagagtcatgacattgttatgcatggccctttgaactctatgtggaaggtc 54190946  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| |||||| | |||| ||  |||||||||    
T  54190945 aacaacctctgatactagaaagtcaaaagtgt 54190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 12917910 - 12917984
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatc 109  Q
    ||||||||| ||||||||  |||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||    
T  12917910 attacttactcatgaataagaggcaagcagacaataagttgtgccgttagacctttttggatgacaaaatcaatc 12917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 49354284 - 49354133
Alignment:
Q  67 aaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac----attcatggacctaggagacatgacattgctacgcatgac 162  Q
    |||||||||||  ||||| |||||||||| ||||||| ||||| |||||||||||||    |||||||||  |||||||||| ||||||||| | |||||    
T  49354284 aaaaagttgtgttgttaagcctttttggacgacaaaatcaatcatcgtaaacacaacattaattcatggatttaggagacattacattgctatgaatgac 49354185  T
Q  163 cctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    | ||| || | |||| |||||||||    ||||| |||||||||| ||||||    
T  49354184 catttaaattctatgcagaaggtcagttacctctagtgctaggaagccaaaa 49354133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 40392800 - 40392723
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctc 112  Q
    |||| |||||| |||||||||||||||||||||| ||| || |||| || ||||||||||||| ||||||||||||||    
T  40392800 attatttacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaaccaatcctc 40392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 48657109 - 48657012
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    ||||||||| | ||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||||| |||| | | |||| ||| |||||||||||    
T  48657109 ctttttggacggcaaaatcaatcatcgtaaacacaacattcatagacctatgagacataacattgctatgcataatcatttggactctatgtagaagg 48657012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 46391488 - 46391399
Alignment:
Q  105 caatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctct 196  Q
    ||||| ||||||| ||||||||||||||  ||||||||||||||||| |  |||||| | |||||||| ||||||||||||||||| |||||    
T  46391488 caatcttcgtaaatacaacattcatggatttaggagacatgacattgtt--gcatgatcttttgaactttatgtagaaggtcaacaacctct 46391399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 49344357 - 49344202
Alignment:
Q  67 aaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacatt----catggacctaggagacatgacattgctacgcatgac 162  Q
    |||||||||||  |||||  |||||| || ||||||| ||||| || |||||||||||||    |||||| ||||||||||| ||||| ||| |  ||||    
T  49344357 aaaaagttgtggtgttaagtctttttagacgacaaaatcaatcatcataaacacaacattaattcatggatctaggagacattacatttctatgagtgac 49344258  T
Q  163 cctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||| |||| ||||||| |||||||   ||| |||| |||||||| |||||||||    
T  49344257 cctttaaactatatgtaggaggtcaattacctttggtcctaggaaaacaaaagtgt 49344202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 12053315 - 12053415
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||| ||| || | || |   ||||||| |||| |||||||||| ||||||||||||    
T  12053315 atatatatcaagacttacttacacatgaatagaaggcaagcagacaacaagctgcgtcgctcggcctttttcgatggcaaaaccaattctcgtaaacaca 12053414  T
Q  122 a 122  Q
    |    
T  12053415 a 12053415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 23233340 - 23233211
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    ||||||||||| ||| ||| ||||| | ||| |||||||||||  | ||| |||||||| |||| |||||||||||| | |||||| ||||||||||  |    
T  23233340 aaggcaagcgg-caacaagctgtgctgctaagcctttttggatagccaaatcaatcctcataaagacaacattcatgaatctaggaaacatgacattatt 23233242  T
Q  154 acgcatgaccctttgaactgtatgtagaaggt 185  Q
    | ||||||||| ||||||| || |||||||||    
T  23233241 atgcatgaccc-ttgaactctacgtagaaggt 23233211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 28739845 - 28739938
Alignment:
Q  114 taaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    ||||||||||||| ||||||||||||||||| |||||| || ||||  | | ||||||| |||||| |||||||||| | | ||||| ||||||    
T  28739845 taaacacaacatttatggacctaggagacataacattgttatgcattgcacgttgaactctatgtaaaaggtcaacaacttgtggtgttaggaa 28739938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 47585242 - 47585153
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 136  Q
    |||||||||||||| | ||||| ||  |  |||| ||||||||||| |||||||||||||||| |||||||||||| ||| || ||||||    
T  47585242 tgaatagaaggcaaacagacaacaaactacgccgctaaacctttttagatgacaaaaccaatcttcgtaaacacaaaatttatagaccta 47585153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 25932044 - 25931973
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttg 93  Q
    |||||||||||  |||||||| ||||||||| ||||||| ||||||| ||||||||||| || | |||||||    
T  25932044 atatatatcaagaattacttatacatgaataaaaggcaaacggacaacaagttgtgccgctagatctttttg 25931973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 40005408 - 40005289
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    ||||||||||| ||||||||||||||||||||| ||||| |  | | |||||| |||| |        || |||| ||||||||||||| ||||||||||    
T  40005408 tatatatcaaatattacttacacatgaatagaaagcaagtgagccacaagttgcgccgct--------ttcgatggcaaaaccaatccttgtaaacacaa 40005317  T
Q  123 cattcatggacctaggagacatgacatt 150  Q
    |||| ||  | |||||||||||||||||    
T  40005316 cattgatatatctaggagacatgacatt 40005289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 2852305 - 2852394
Alignment:
Q  44 acatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    |||||||| ||||| || | | ||| ||| || |||| ||| |||||||| |||| |||||||||||| || ||||||||||||||||||    
T  2852305 acatgaatggaaggtaatcaggcaacaagctgcgccgctaagcctttttgaatgaaaaaaccaatccttgtgaacacaacattcatggac 2852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 45761049 - 45760940
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    ||||||| || ||||| ||||||||||||| || | ||||||  || ||  |||| ||||| || |||||||||||||||| ||||| || |||| ||||    
T  45761049 tatatattaaggattaattacacatgaataaaaagtaagcgggtaacaaactgtgtcgttagacttttttggatgacaaaatcaatcgtcataaatacaa 45760950  T
Q  123 cattcatgga 132  Q
     |||||||||    
T  45760949 tattcatgga 45760940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 15785360 - 15785304
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtg 77  Q
    ||||||| | |||||||| ||||||||||||||||| |||| |||||| ||||||||    
T  15785360 aatatattttaaagattaattacacatgaatagaagacaagtggacaacaagttgtg 15785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 31847074 - 31847131
Alignment:
Q  161 accctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||| ||| |||||||||||||||| || |||| ||||||||| ||||||||||    
T  31847074 accgtttggactctatgtagaaggtcaaccgcttctgatgctaggaagccaaaagtgt 31847131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 41372314 - 41372253
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggat 96  Q
    ||||||||||||||||||| |||||||| ||||| |||||| || | || |||||| |||||    
T  41372314 attacttacacatgaataggaggcaagcagacaacaagttgcgctgctagacctttgtggat 41372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 41945005 - 41945041
Alignment:
Q  20 aaatatatatcaaagattacttacacatgaatagaag 56  Q
    |||||||||| || |||||||||||||||||||||||    
T  41945005 aaatatatattaaggattacttacacatgaatagaag 41945041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 45386218 - 45386126
Alignment:
Q  124 attcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    |||||||||| || ||||||  |||||| || ||||||||||||||| | || ||||||||| ||   ||||| ||||||| || ||||||||    
T  45386218 attcatggacttaagagacacaacattgttatgcatgaccctttgaattttaggtagaaggttaatgacctcttgtgctagaaagccaaaagt 45386126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 52022042 - 52022090
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 136  Q
    ||||| ||||| ||||| |||  ||||||||||||||||||||||||||    
T  52022042 tttttagatgaaaaaactaattatcgtaaacacaacattcatggaccta 52022090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 38815142 - 38815327
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||| ||| || |||| ||| ||||||||||||  ||||||||||||||||||||||    
T  38815142 atatatatcaaggattgcttacacatgaatagaaggcaagcgggcaacaagctgcgccgctaagcctttttggatggaaaaaccaatcctcgtaaacaca 38815241  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  38815242 acattcatggacctaggagacatgacattgctatgcatgaccctttgaactctatgtagaaggtcaacaccctctggtgctaggaa 38815327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 22589595 - 22589400
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||| ||||||||||| ||| ||| || |||| || ||||||||||||| |||||||||||||||| ||||||    
T  22589595 atatatataaaccattatttacacttgaataaaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacaca 22589496  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||| |||||| ||||||||||||||||| |||||||| |||||||| |||||| || ||||||||||||||||||||||||||| |||||||    
T  22589495 acattcatagacctatgagacatgacattgctatgcatgaccttttgaactctatgta-aaagtcaacagcctctggtgctaggaaaccgaaagtgt 22589400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 18804474 - 18804654
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||| | ||| ||| || |||| || ||||||||||||| ||||||||||||||||||||| |||| || || |||    
T  18804474 attatttacacttgaatagaaggcaagcaggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacaaaacactc-tgaacc 18804572  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    |||||| |||||||||| || |||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  18804573 taggagtcatgacattgttatgcatgaccttttgaaatctatgtagaaggtcaacagcctctggtgctaggaaatcaaaagt 18804654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 24124889 - 24125068
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||||||||||||  |||||| || ||||  || | |||  ||||| |||||| |||||| ||||||||||||||||||||||    
T  24124889 attatttacacttgaatagaaggcaagcggcaaaaaagctgcgccgccaagcttttacggatggcaaaactaatccttgtaaacacaacattcatggacc 24124988  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    || ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||    
T  24124989 tatgagacatgacattgctatgcatgaccttttgaactttatgtagaaggccaacaacctctggtgctaggaaatcaaaa 24125068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 3187874 - 3188011
Alignment:
Q  78 ccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatg 177  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||| ||||    
T  3187874 ccgttagacctttttggatggcaaaaccaattctcgtaaacacaacattcatggacctaggagacataacattgctatgcataaccctttg-actctatg 3187972  T
Q  178 tagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    |||||||| |||| |||||| ||||||||| || |||||    
T  3187973 tagaaggttaacaacctctgatgctaggaagccgaaagt 3188011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 37514101 - 37514255
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    ||||||||||| ||| ||| || ||||||| |||||||||| || ||| | |||||||||| || |||||||||||||||||| ||||| | |||||| |    
T  37514101 aaggcaagcgggcaacaagctgcgccgttagacctttttgggtggcaagatcaatcctcgtgaatacaacattcatggacctaagagacgtaacattgat 37514200  T
Q  154 acgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    | |||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  37514201 atgcatgaccttttgaactctatgtagaaggtcaacagcctctggcgctaggaaa 37514255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 4699783 - 4699915
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||| | |||||||  ||||| |||||||||| ||| ||||||||    
T  4699783 cctttttggatggcaaaactaatccttgtaaacacaacattcatggacctaggtgacataatattgctattcatga-cctttgaactttatatagaaggt 4699881  T
Q  186 caacagcctctggtgctaggaaaccaaaagtgtt 219  Q
    |||||||||||||||||| ||| |||||||||||    
T  4699882 caacagcctctggtgctatgaagccaaaagtgtt 4699915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 6592476 - 6592619
Alignment:
Q  74 tgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactg 173  Q
    ||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||  || |||||||| ||||||||     
T  6592476 tgtgccgctagacctttctggatgacaaaaccaatactcgtaaacacaacattcatgaacctatgagacatgacatt-atatgcatgaccttttgaactc 6592574  T
Q  174 tatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| |||||||||||| ||||||| ||||||||||  |||||||    
T  6592575 tatgcagaaggtcaacaacctctggagctaggaaactgaaagtgt 6592619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 42659088 - 42659220
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||||||| |||||| |||||||||||||| ||||| | |||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  42659088 attacttacacaagaataggaggcaagcggacaacaagttataccgttagacctttttggatgacaaaattaatcctcgtaaacacaacattcatgaacc 42659187  T
Q  135 taggagacatgacattgctacgcatgacccttt 167  Q
    ||| |||||| | ||||||| |||| |||||||    
T  42659188 tagaagacataatattgctatgcataacccttt 42659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 43823840 - 43824033
Alignment:
Q  24 atatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac 123  Q
    ||||||||| ||||| |||||||| ||||||||||||| || |||||||||| ||   ||  ||||||| ||||||||| |||||   ||||||||||||    
T  43823840 atatatcaaggattaattacacat-aatagaaggcaagagggcaaaaagttgcgcaactaggcctttttagatgacaaacccaattgccgtaaacacaac 43823938  T
Q  124 attcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| ||||| || |||||||||||||||||| |||||||| |||||||| |||||  |||||||| |||||||  ||| ||||| ||||||||||    
T  43823939 attaatggatctcggagacatgacattgctatgcatgaccatttgaactctatgtgaaaggtcaatagcctctaatgcaaggaagccaaaagtgt 43824033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 3821155 - 3821268
Alignment:
Q  105 caatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctag 204  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||    
T  3821155 caatcctcgtaaacataacatttatgaacctaggagacatgacattgctatgcattaccctttgaactctatgtagaaggtcaacaacctctggttctag 3821254  T
Q  205 gaaaccaaaagtgt 218  Q
    ||  ||||||||||    
T  3821255 gatgccaaaagtgt 3821268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 39434530 - 39434711
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| ||||  ||   ||| ||| || |||| || ||||||||||||| ||||| |||||||||||||||||||||||||||| |    
T  39434530 attacttacacatgaataggaggc--gctagcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggatc 39434627  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    || ||||||| |||||| || |||| |||||||| ||| |||||||||| ||||  ||||||| |||||||||  |||||||||    
T  39434628 taagagacattacattgatatgcataaccctttggactctatgtagaagatcaaatgcctctgatgctaggaagtcaaaagtgt 39434711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 6618185 - 6618328
Alignment:
Q  74 tgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactg 173  Q
    |||||||||| | |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||  || |||||||| |||||||      
T  6618185 tgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgacatt-atatgcatgaccttttgaacgc 6618283  T
Q  174 tatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| | ||||||||||  |||||| ||||||||||  |||||||    
T  6618284 tatgcaaaaggtcaacaatctctggagctaggaaactgaaagtgt 6618328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 214
Target Start/End: Complemental strand, 25022007 - 25021881
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||||||||| |||| ||||| | ||||||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||||| | ||| || |||||    
T  25022007 tttttggatgataaaatcaatcattgtaaacacaacattcctggacctaggagatatgacattgttgtgcatgaccctttgaactttgtgtggatggtca 25021908  T
Q  188 acagcctctggtgctaggaaaccaaaa 214  Q
    ||| |||||||||||||||| ||||||    
T  25021907 acaacctctggtgctaggaagccaaaa 25021881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 4073400 - 4073559
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||||||| | ||||||||||||  || |||||||| || ||| | ||||||||||| |||| |||| ||||||||||||||||||| ||| || |||    
T  4073400 ttacacatgattggaaggcaagcgggaaacaagttgtgtcgctaagcttttttggatgataaaatcaattctcgtaaacacaacattcacggatcttgga 4073499  T
Q  140 gacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggt 199  Q
     |||||||||||||| ||||||| | ||||  | | ||||||||||||||| ||||||||    
T  4073500 aacatgacattgctatgcatgactcattgatttctctgtagaaggtcaacaacctctggt 4073559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 28196105 - 28196236
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||||||||| |||| | |||||||||||||| | |||| |||||||||||||||||| |  |||||| |||||||||| || ||||| ||||    
T  28196105 ctttttggatgacaaaatcaattcccgtaaacacaacatccgtggatctaggagacatgacattgttgtgcatgatcctttgaactctacgtagatggtc 28196204  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| ||| ||||||||||||  |||||||||    
T  28196205 aacaacctatggtgctaggaagacaaaagtgt 28196236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 9259485 - 9259377
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| ||||| | |||||||||||| ||||||  || |||||| ||||||||||||||    
T  9259485 tttttggatgacaaaatcaatcttcgtaaatacaacattcatggacttaggatatatgacattgctatgcatgagtctgtgaactctatgtagaaggtca 9259386  T
Q  188 acagcctct 196  Q
    ||| |||||    
T  9259385 acaacctct 9259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 5329849 - 5329693
Alignment:
Q  34 gattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    ||||| |||||||||||||||||||||  |   || |||||||| |||||  |||||||||||| |||||  ||||||| ||||||||||||| || |||    
T  5329849 gattaattacacatgaatagaaggcaaatgtgaaataagttgtgtcgttaggcctttttggatgtcaaaattaatcctcataaacacaacattgatagac 5329750  T
Q  134 ctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
     |||||||||||| |||| |   ||||||||||||||||  ||| ||||||||||||    
T  5329749 ataggagacatgatattgttgtccatgaccctttgaactcaatgcagaaggtcaaca 5329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 3863236 - 3863361
Alignment:
Q  96 tgacaaaaccaatcctcgtaaacacaaca---ttcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagc 192  Q
    |||||| | ||||||||||||||||||||   ||||| ||| ||||| | |||||||||||| |||  |||||||||||| ||||||||||||||| | |    
T  3863236 tgacaatatcaatcctcgtaaacacaacaatattcatagacttaggaaagatgacattgctatgcactaccctttgaactctatgtagaaggtcaataac 3863335  T
Q  193 ctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||| ||||||| ||||||||||    
T  3863336 ctctggtcctaggaagccaaaagtgt 3863361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 500103 - 500201
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    |||| |||||| |||||||||||||||||| ||| ||| |||||||| || |||||||| |||  |||| |||||||||||||||||||||||||||||    
T  500103 attatttacacttgaatagaaggcaagcgggcaataagctgtgccgtcaagcctttttgaatggtaaaatcaatcctcgtaaacacaacattcatggac 500201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 8882247 - 8882320
Alignment:
Q  77 gccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacatt 150  Q
    |||||||||| ||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  8882247 gccgttaaacattttttgatggcaaaattaatcctcgtaaacacaacattcatggacctaggagacatgacatt 8882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 24451036 - 24451105
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcat 159  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  24451036 ttttggatggcaaaac-aatcatcgtgaacacaacattcatggacctaggagacatgacattgctatgcat 24451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 35740135 - 35740049
Alignment:
Q  132 acctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||| |||||||||||| || |||||||  |||||||| |||||||||||||||||  |||||||||||||||||  |||||||    
T  35740135 acctaggggacatgacattgttatgcatgactttttgaactctatgtagaaggtcaacaatctctggtgctaggaaactgaaagtgt 35740049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 3825567 - 3825679
Alignment:
Q  106 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctagg 205  Q
    |||| |||||||||||| ||||||||| ||| || ||||||| |||||| |||| || ||||||| | | ||||||||||||||| ||| |||| |||||    
T  3825567 aatcatcgtaaacacaatattcatggatctatgaaacatgacgttgctatgcattactctttgaattctgtgtagaaggtcaacaacctatggttctagg 3825666  T
Q  206 aaaccaaaagtgt 218  Q
    || ||||| ||||    
T  3825667 aagccaaaggtgt 3825679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 8540635 - 8540461
Alignment:
Q  26 atatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 125  Q
    ||||||||||||| ||| |||| |||||||| ||  |   ||| ||||||||| | ||   |||||||||||| |||| ||||| |||||||||||||||    
T  8540635 atatcaaagattaattagacataaatagaagacatacatgcaacaagttgtgctgctacgtctttttggatgataaaatcaatcatcgtaaacacaacat 8540536  T
Q  126 tcatggacctaggagacatgacattgctacgcatgaccctttgaact---gtatgtagaaggtcaacagcctctg 197  Q
    | ||| |  ||| | ||||||||||| || |||||||||||||||||    ||||||||| ||||||| ||||||    
T  8540535 ttatgaaaatagaaaacatgacattgttaagcatgaccctttgaactttattatgtagaaagtcaacaacctctg 8540461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 11611394 - 11611279
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacac 120  Q
    |||||||||||||||||| ||||| ||||||| |||| || ||  ||| ||||||| |||||  | | |||||||||| |||| ||||| | ||||||||    
T  11611394 aatatatatcaaagattaattacatatgaatataaggtaaccgagcaataagttgtaccgttggatccttttggatgaaaaaatcaatcttggtaaacac 11611295  T
Q  121 aacattcatggaccta 136  Q
    || |||||||||||||    
T  11611294 aatattcatggaccta 11611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 18596858 - 18596759
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||| ||||| ||| || |||| || ||||||| ||||| |||||||||||||||| ||||||    
T  18596858 atatatataaaccattatttacacttgaatagaaggcaagctgacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtgaacaca 18596759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 121972 - 121795
Alignment:
Q  29 tcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattca 128  Q
    ||||||||||  |||| |||||||| ||||||||  |||| |||||  ||| |||  | |||||  ||| ||||| ||||||||||||||||||||| ||    
T  121972 tcaaagattaactacatatgaatagtaggcaagcaaacaacaagttacgccattatgcgtttttt-atgtcaaaatcaatcctcgtaaacacaacatcca 121874  T
Q  129 tggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    ||||| |||  |||||||||||| || |||||| | ||| |||| | ||||||| |||||||  |||||  ||||||||    
T  121873 tggacttagatgacatgacattgatatgcatgatcttttaaactttgtgtagaatgtcaacaatctctgaggctaggaa 121795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 39671332 - 39671246
Alignment:
Q  121 aacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||||||||||| |||||||||||||||||  ||  ||||||||||| |||| || ||| ||||| |||| ||||||||||||||||    
T  39671332 aacattcatggatctaggagacatgacatttttattcatgacccttttaactctacgtaaaaggttaacaacctctggtgctaggaa 39671246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 40223541 - 40223476
Alignment:
Q  143 atgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    ||||||||| || |||||||| |||||||| ||||||||||||||||| |||| ||||||||||||    
T  40223541 atgacattgttatgcatgaccttttgaactctatgtagaaggtcaacaacctccggtgctaggaaa 40223476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 8115738 - 8115834
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctct 196  Q
    |||| ||||| || |||||| ||||||||||||| |   | |||||||||||| | |||||| |||||||||| ||||||||||||||||| |||||    
T  8115738 aaaatcaatcatcataaacataacattcatggactttataaacatgacattgcaatgcatgatcctttgaactttatgtagaaggtcaacaacctct 8115834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 4066758 - 4066825
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgcta 154  Q
    |||||||||||  |||||||||| |||| ||||||||| |||||||||||||| |||| |||||||||    
T  4066758 ctttttggatggtaaaaccaatcatcgtgaacacaacagtcatggacctaggacacattacattgcta 4066825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 8228066 - 8227984
Alignment:
Q  50 atagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatgga 132  Q
    |||||||| ||| ||| || ||| || |||||||||  |||||||||  |||||||| |||||||||||||||||||||||||    
T  8228066 atagaaggaaagtggaaaacaagctgcgccgttaaatttttttggatagcaaaaccattcctcgtaaacacaacattcatgga 8227984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 6792189 - 6792245
Alignment:
Q  94 gatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacatt 150  Q
    |||||||||||||||  |||||||||||||||| |||||| || |||||||||||||    
T  6792189 gatgacaaaaccaatattcgtaaacacaacatttatggacttatgagacatgacatt 6792245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 24320186 - 24320293
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    |||| ||||| ||||| ||||||| ||||||||| ||| | | ||| ||| ||  | | || ||||||||||||  ||||| ||||||||||||||||||    
T  24320186 tatacatcaatgattaattacacacgaatagaagacaaacaggcaacaagctgcactgctagacctttttggatatcaaaatcaatcctcgtaaacacaa 24320285  T
Q  123 cattcatg 130  Q
    ||||||||    
T  24320286 cattcatg 24320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 8619669 - 8619774
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacac 120  Q
    |||||||| ||||||||| ||||||||||||| |||  |||||||||| ||| ||    ||||  |||||||| | | ||||| ||||| ||||||||||    
T  8619669 aatatatagcaaagattaattacacatgaataaaagttaagcggacaataagctgcattgttaggcctttttgaaaggcaaaatcaatcgtcgtaaacac 8619768  T
Q  121 aacatt 126  Q
    ||||||    
T  8619769 aacatt 8619774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 31150370 - 31150325
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggac 66  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||    
T  31150370 aatatatatcaaggattaattacacatgaatagaagacaagcggac 31150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 44337201 - 44337272
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaa 107  Q
    ||||||||||||||||||| |||||||||  ||| ||| || |||| |  ||||||||||||| |||||||||    
T  44337201 attacttacacatgaataggaggcaagcgagcaacaagctg-gccgctggacctttttggatggcaaaaccaa 44337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 102954 - 103150
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||||| ||| |||||| |||| || ||||||||||||| |||||||||||||||||||||||    
T  102954 atatatataaaccattatttacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacaca 103053  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||||| ||||||| || |||||||| ||||| ||  |||||||||||||||||||||||||||||||||||| |||||||    
T  103054 acattcatggacctaggagacacgacattgttatgcatgaccttttgagctcgatgtagaaggtcaacagcctctggtgctaggaaaccgaaagtgt 103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 39583476 - 39583287
Alignment:
Q  34 gattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    |||||||||||||||||||||| |||||| ||||| |||||| |||| || ||||||||||||| ||||| |||||||||||||||| ||||||||| ||    
T  39583476 gattacttacacatgaatagaaagcaagcagacaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacgacattcatgaac 39583377  T
Q  134 ctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgttgaaa 223  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||| || |||||||||||| ||||||| ||||    
T  39583376 ctaggagacatgacattgctatgcatgaccctttgaactctatgcagaaggtcaacaacctatgatgctaggaaaccgaaagtgtcgaaa 39583287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 32546643 - 32546839
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||||| ||| ||| || |||| || ||||||||||||| |||||||||||||||| ||||||    
T  32546643 atatatataaaccattatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacaca 32546742  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||||||||||| ||| |||||||  |||||||| ||||||||||||||||||||| ||||||||||||||  |||||||    
T  32546743 acattcatggacctaggagacatgacattactatgcatgactttttgaactctatgtagaaggtcaacagcctttggtgctaggaaactgaaagtgt 32546839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 53785557 - 53785753
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||||| ||| ||| |  |||| |  ||||| ||||||| ||||||||||||||||||||| |    
T  53785557 atatatataaaccattatttacacttgaatagaaggcaagcgggcaacaagctacgccgctggaccttgttggatggcaaaaccaatcctcgtaaacata 53785656  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  53785657 acattcatggacctaggagacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgctaggaaaccgaaagtgt 53785753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 26772619 - 26772802
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||| || |||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  26772619 attacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattcatggacc 26772718  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||| || |||| | |||||| ||| ||| |||||||||||| ||||||| ||||||||| ||||||||||    
T  26772719 taggagacataacattgttatgcataatcctttgtactctatatagaaggtcaactgcctctgatgctaggaagccaaaagtgt 26772802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 44198628 - 44198811
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||||||| ||| |||| || | |||||||||||||| ||||| ||||  ||| ||||||||||||||||||||    
T  44198628 attatttacacttgaatagaaggcaagcggacaacaagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacattcatggacc 44198727  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||| |||| ||| | |||||| |||||||||||||||||||||| |||| || |||||| |||||||    
T  44198728 taggagacatgacattgctatgcataaccttctgaactctatgtagaaggtcaacagcctcgggtgttaagaaaccgaaagtgt 44198811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 52741771 - 52741575
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||| ||||| ||| |||||| | || || ||||||||||||| |||||| |||| |||| || |||    
T  52741771 atatatataaaccattatttacacttgaatagaaggcgagcgggcaataagttgcgtcgctagacctttttggatggcaaaacaaatcttcgtgaataca 52741672  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | ||  ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  52741671 agataaatggatctaggagacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgctaggaaaccaaaagtgt 52741575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 26856992 - 26856835
Alignment:
Q  51 tagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacatt 150  Q
    |||||||||||||  ||| ||| || |||| ||  ||||||||||||  |||||||||||||| || ||||||||||||  |||||||||||||||||||    
T  26856992 tagaaggcaagcgagcaacaagctgcgccgctaggcctttttggatggtaaaaccaatcctcgcaagcacaacattcataaacctaggagacatgacatt 26856893  T
Q  151 gctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  26856892 gctatgcatgaccctttgaactctatgtagaaggtcaacagtctctagtgctaggaaa 26856835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 44694 - 44860
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa---cattcatgg 131  Q
    |||| |||||| |||||||||||||||||| ||| ||  || |||| || ||||||||||||| |||||| |||||| || |||||||   |||||||||    
T  44694 attatttacacttgaatagaaggcaagcgggcaacaaactgcgccgctagacctttttggatggcaaaacaaatccttgtgaacacaacaacattcatgg 44793  T
Q  132 acctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctgg 198  Q
    |||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  44794 acctaggaaacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctgg 44860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 4472910 - 4473105
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||  ||||||||||||||||||||||| |||||||| || ||| | |  | ||| || ||||||||||||||||||||| ||||||||||||    
T  4472910 atatatatcattgattacttacacatgaatagaagacaagcggataacaagctatatcattagacttttttggatgacaaaaccaattctcgtaaacaca 4473009  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | |||||| |||||||||||||||| ||||||| ||||||  ||||||||| |||||||||||| || |   |||||||||||||| || |||||||    
T  4473010 atattcatagacctaggagacatgaaattgctatgcatgattctttgaactttatgtagaaggttaaga-attctggtgctaggaagccgaaagtgt 4473105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 38671126 - 38670943
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||||| ||||| ||| |||||||||| ||| || |||| || || ||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  38671126 attatttacacataaataggaggtaagcggacaacaagctgcgccgctagacttttttagatggcaaaaccaatcctcgtacacacaacattcatggacc 38671027  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||||||| |||| || ||||  ||| |||||||||||||| | ||||||| |||||| || ||||||||||    
T  38671026 taggagacataacattgctatgcataactctttagactctatgtagaaggtcatccgcctctgatgctagaaagccaaaagtgt 38670943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 37133240 - 37133062
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||| |||||||||| |||  |||||| ||  || |||| || ||||||||||||  |||||||||||||  ||||||||||||||||  || |||||    
T  37133240 ttacacctgaatagaagacaatgggacaacaaactgcgccgctagacctttttggatcgcaaaaccaatccttataaacacaacattcattaacttagga 37133141  T
Q  140 gacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||||||| |||||| |||||||    
T  37133140 gacatgacattgctatgcatgacctttagaactctatgtagaaggtcaacaacctctggtgctaagaaaccgaaagtgt 37133062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 3443506 - 3443375
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||| |||||| ||||||||||| ||||||||||||||||||| ||  ||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  3443506 ctttgtggatggcaaaaccaatcatcgtaaacacaacattcatagatttaggagacaagacattcctacgcatgaccctttgaactctatgtagaaggtc 3443407  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| ||||| ||||||||||||  |||||||    
T  3443406 aacaacctctagtgctaggaaactgaaagtgt 3443375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 38145969 - 38146100
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||| || |||||| ||     
T  38145969 ctttttagatgacaaaatcaatcatcgtaaacacaacgttcatggacctaggagacatgacattgttatgcatgaccctttgaactctaagtagaatgta 38146068  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| ||||||||||||||||  |||||||||    
T  38146069 aacaacctctggtgctaggaagtcaaaagtgt 38146100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 209
Target Start/End: Original strand, 21552525 - 21552703
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||||| || ||| ||| |||||| ||||| ||  ||||||||||| |||||||||| || ||||||||||||||||||||||    
T  21552525 attatttacacttgaatagaaggtaaacgggcaacaagttgcgccgtcaagtctttttggatgtcaaaaccaattcttgtaaacacaacattcatggacc 21552624  T
Q  135 taggagacatgacat----tgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaac 209  Q
    ||||||| |||| ||    | ||| |||||||| |||||||| |||||||||||||||||| ||||| |||||||||||    
T  21552625 taggagatatgatattacgtactatgcatgaccttttgaactctatgtagaaggtcaacagtctctgatgctaggaaac 21552703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 4764038 - 4763888
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||| ||| |||||| |||   || |||||||||||| |||  | |||||||||||||||||||||||||||||    
T  4764038 attatttacacttgaatagaaggcaagcgggcaacaagttgcgccaccaagcctttttggatggcaattctaatcctcgtaaacacaacattcatggacc 4763939  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
     ||||||||||||||||||| |||| ||| |||||||| |||||||||||||    
T  4763938 -aggagacatgacattgctatgcataaccttttgaactctatgtagaaggtc 4763888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 38979045 - 38978862
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||| ||| | | ||| ||| |||||| |  ||||| |||||||||||| |||||| |||  |||||||||||||||| ||  |||    
T  38979045 attatttacacttgaatataagactaacgggcaacaagttgcgttgttaagcctttttggatggcaaaactaattttcgtaaacacaacattgataaacc 38978946  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    || |||||||||||||| || |||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||    
T  38978945 tatgagacatgacattgttatgcatcaccttttgaactatatgtagaaggtcaacggcctcaggtgctaggaaaccaaaagtgt 38978862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 5338561 - 5338687
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaa 188  Q
    ||||||||| |||||||||||||||||||||||||||||   |||||| |||||| ||||||||||||||||||| |||||||| ||||||||| |||||    
T  5338561 ttttggatggcaaaaccaatcctcgtaaacacaacattc---gacctatgagacaagacattgctacgcatgaccttttgaactctatgtagaatgtcaa 5338657  T
Q  189 cagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||  |||| |||||||||| || |||||||    
T  5338658 caatctctagtgctaggaagccgaaagtgt 5338687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 25324891 - 25325081
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||||| ||||||||||||||| | ||||| ||| || | |||||    |||||||||| ||||| ||||| |||||| ||||| |||||||||      
T  25324891 attacttacatatgaatagaaggcaaacagacaataaggtgcgtcgttagtt-tttttggatggcaaaagcaatcatcgtaagcacaatattcatggatt 25324989  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgttgaaagca 226  Q
    ||||| || ||||||||||| |||||| | |||||||| |||||||||||||||||  || ||||||||||||| | |||||||||||||||    
T  25324990 taggaaacttgacattgctatgcatgatcatttgaactctatgtagaaggtcaacaatctatggtgctaggaaatcgaaagtgttgaaagca 25325081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 13582422 - 13582554
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||||||||| | ||| ||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||| |||||||| | ||||||||||    
T  13582422 cctttttggatggctaaatcaatcttcgtaaacacaacattcatggtcctaggagacatgacattgttatgcatgaccttttgaactctctgtagaaggt 13582521  T
Q  186 caacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||     ||||||||||||| |||||||||    
T  13582522 caacaattgttggtgctaggaaatcaaaagtgt 13582554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 49017828 - 49018007
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||||||| ||| ||  |||   |  ||||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  49017828 attatttacacttgaatagaaggcaagcggacaacaagctgcaccgccgatactttttggatggcaaaatcaatcctcataaacacaacattcattgacc 49017927  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||    ||||||||||  || |||||||| |||||||| || ||||||| |||||| |||| |||||||||||||| |||||||    
T  49017928 ta----acatgacatttatatgcatgaccttttgaactttacgtagaagatcaacaacctcgggtgctaggaaaccgaaagtgt 49018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 52412101 - 52411983
Alignment:
Q  71 agttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaa 170  Q
    ||||||| |||||| |||||||||||| ||||| ||||| | |||||||||| ||| ||||  |||||||||||||||||| || |||||||||||||||    
T  52412101 agttgtgtcgttaagcctttttggatggcaaaatcaatcattgtaaacacaatatttatgggtctaggagacatgacattgttatgcatgaccctttgaa 52412002  T
Q  171 ctgtatgtagaaggtcaac 189  Q
    || ||||||||||||||||    
T  52412001 ctctatgtagaaggtcaac 52411983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 54508574 - 54508451
Alignment:
Q  91 ttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    ||||||||||||||||||  || |||||||||||||||||||||||| ||| |||| |||| ||||||||| |||||| ||  |||| ||||||||||||    
T  54508574 ttggatgacaaaaccaattatcttaaacacaacattcatggacctagcagatatgatattgttacgcatgatcctttgtaccttatgcagaaggtcaaca 54508475  T
Q  191 gcctctggtgctaggaaaccaaaa 214  Q
     ||||||||||||| ||| |||||    
T  54508474 acctctggtgctagaaaatcaaaa 54508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 4669890 - 4669793
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattg 151  Q
    ||||||||||| ||| ||| || ||||  |||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4669890 aaggcaagcgggcaacaagctgcgccgccaaacctttttggataacaaaatcaatcatcgtaaacacaacattcatggaccaaggagacatgacattg 4669793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 3643005 - 3643149
Alignment:
Q  26 atatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 125  Q
    ||||||| ||||| |||||||  |||||||||||||||| ||| ||| || | |||||  |||||| ||||||||||| ||||| ||  |||||||||||    
T  3643005 atatcaaggattaattacacaataatagaaggcaagcgggcaataagctgcgtcgttaggccttttcggatgacaaaatcaatcatc--aaacacaacat 3643102  T
Q  126 tcatggacctaggagacatgacattgctacgcatgaccctttgaact 172  Q
    |||||||||||  | ||||||||||| || |||||| ||||||||||    
T  3643103 tcatggacctaaaaaacatgacattgttatgcatgatcctttgaact 3643149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 214
Target Start/End: Original strand, 37992246 - 37992372
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||||||||| |||||||||| ||| |||||||||||||||| || || ||| ||||||||| ||  ||||||||| ||||||| | |||||||||||    
T  37992246 ctttttggatgataaaaccaatcttcgaaaacacaacattcatgcacgtacgagtcatgacattactgtgcatgaccc-ttgaactctttgtagaaggtc 37992344  T
Q  187 aacagcctctggtgctaggaaaccaaaa 214  Q
    |||| ||||| |||||| ||| ||||||    
T  37992345 aacaacctctagtgctatgaagccaaaa 37992372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 7257757 - 7257655
Alignment:
Q  80 gttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgta 179  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||||||||||||||||| | |||||| ||||||| | ||  ||||||||||| ||||||    
T  7257757 gttaagcctttttgaatgacaaaactaatcttcgtaaacacaacattcatggacctagaatacatgatattgctatggatagccctttgaactatatgta 7257658  T
Q  180 gaa 182  Q
    |||    
T  7257657 gaa 7257655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 25094809 - 25094635
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||||||||| ||||| |||| ||||| ||| |    |||||| ||||||| |||  |||||| |||| |||| |||||||||||||||||| ||  |    
T  25094809 ttacacatgaatggaaggtaagcagacaacaagat----cgttaagcctttttagattgcaaaactaatcttcgtgaacacaacattcatggacttaaaa 25094714  T
Q  140 gacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    || || ||||||||| |||||||| |||||||| ||||||||||||||| | | | ||||||||| ||  |||||||||    
T  25094713 gatattacattgctatgcatgaccatttgaactatatgtagaaggtcaatatcttttggtgctagaaagtcaaaagtgt 25094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 46941032 - 46940871
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| || ||||| |||||||||||||||||| || | | ||| ||||||  ||| ||   |||||||||| |||||| ||||  |||||||||||    
T  46941032 atatatattaatgattaattacacatgaatagaaggtaaacaggcaacaagttgcaccgctaggtctttttggataacaaaatcaattttcgtaaacaca 46940933  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaag 183  Q
    ||||||||| ||||| ||| ||||||||||    |||||| |||||||||| ||||||||||    
T  46940932 acattcatgaacctatgagtcatgacattgtcgtgcatgatcctttgaactctatgtagaag 46940871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 7502204 - 7502079
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||  ||||| ||||  ||||||||| || ||||||||| ||| ||| |||||||||| |  |||||||||||| |||| |  ||||||||||    
T  7502204 ctttttggatagcaaaatcaattatcgtaaacataatattcatggatctatgagtcatgacattgttgtgcatgaccctttaaactct--gtagaaggtc 7502107  T
Q  187 aacagcctctggtgctaggaaaccaaaa 214  Q
    |||| |||||||||||||||||||||||    
T  7502106 aacaacctctggtgctaggaaaccaaaa 7502079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 7900772 - 7900902
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||||||||  ||||| |||| | ||||||| || ||| |||||||||||| |||| ||||||||| | || | ||||  |||| ||||||||||||||    
T  7900772 tttttggatggtaaaactaatcattgtaaacaaaatattgatggacctaggaaacataacattgctatgtataatccttcaaactctatgtagaaggtca 7900871  T
Q  188 acagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||||| ||||||||| || |||||||    
T  7900872 acaacctctgatgctaggaagccgaaagtgt 7900902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 8591989 - 8592144
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||||  |||||||||||||||||| |||||||| ||  || ||| || |||| |   |||||||||||| ||||| |||||| | ||||||||    
T  8591989 atatatatcaagaattacttacacatgaatataaggcaagtgggtaacaagctgcgccgctgggcctttttggatggcaaaatcaatccgc-taaacaca 8592087  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgt 178  Q
    | ||| |||||||||| || | |||||||| || ||||||| | ||||||| |||||    
T  8592088 atattgatggacctagaaggcgtgacattgatatgcatgactcgttgaactctatgt 8592144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 26393900 - 26393813
Alignment:
Q  67 aaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgcta 154  Q
    |||||||||| ||| |||||||| |||||||  || | ||||||||||||||||||||||||| |||| ||||||||| | |||||||    
T  26393900 aaaaagttgtaccgctaaaccttgttggatggaaatatcaatcctcgtaaacacaacattcatagaccaaggagacataatattgcta 26393813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 42205960 - 42206081
Alignment:
Q  67 aaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctt 166  Q
    ||||||||||| || | | ||||||  ||||| |||| ||||| ||||||||||||| || ||||| |||||| |||| ||||| ||| |||||||| ||    
T  42205960 aaaaagttgtgtcgcttagccttttaagatgataaaatcaatcatcgtaaacacaacgtttatggatctaggatacattacatttctatgcatgaccatt 42206059  T
Q  167 tgaactgtatgtagaaggtcaa 188  Q
    | |||| ||||||||| |||||    
T  42206060 taaactctatgtagaatgtcaa 42206081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 51234563 - 51234646
Alignment:
Q  121 aacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctag 204  Q
    |||||| |||| | |||||||||| |||||| || |||| ||| |||||||| ||||||||||||||||| |||||| ||||||    
T  51234563 aacattaatgggcttaggagacataacattgttatgcataaccttttgaactctatgtagaaggtcaacaacctctgatgctag 51234646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 32691060 - 32690966
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtaga 181  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||| |||||||||| | |||  |  ||||||| |||| |||| ||||||||    
T  32691060 ctttttggatgataaaatcaatcctcttaaacacaacattcatagacttaggagacataatattattgtgcatgactcttttaactctatgtaga 32690966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 26276528 - 26276577
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggaccta 136  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  26276528 ctttttggatggcaaaatcaatcctcataaacacaacattcatggaccta 26276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 3376848 - 3376808
Alignment:
Q  174 tatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  3376848 tatgtagaaggtcaacaacctctagtgctaggaaaccaaaa 3376808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 43123085 - 43123189
Alignment:
Q  114 taaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaa 213  Q
    ||||||||| ||| || ||||||  |||||| | ||| ||| ||| ||||||||||||| | ||||||| |||||||  || ||||||||| ||| ||||    
T  43123085 taaacacaatatttattgacctataagacataatatttctatgcacgaccctttgaactttttgtagaaagtcaacaaactatggtgctagaaaatcaaa 43123184  T
Q  214 agtgt 218  Q
    |||||    
T  43123185 agtgt 43123189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 53502658 - 53502590
Alignment:
Q  77 gccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatg 145  Q
    |||||||||  ||||||  |||||||| ||||  |||||||||||||||||||| ||||| ||||||||    
T  53502658 gccgttaaatatttttgactgacaaaatcaattttcgtaaacacaacattcatgcacctaagagacatg 53502590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 50446177 - 50446232
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggaga 141  Q
    ||||||||||||||||||||||||||  |||| || |||| ||| |||||||||||    
T  50446177 cctttttggatgacaaaaccaatccttctaaaaactacatccatagacctaggaga 50446232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 3376941 - 3376880
Alignment:
Q  78 ccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||| | |||||| |||||||||| ||||| || |||||||||||||||| ||| |||||    
T  3376941 ccgttagatctttttagatgacaaaatcaatcatcataaacacaacattcatagacatagga 3376880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 5338513 - 5338553
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagc 62  Q
    ||||||||||| |||||| ||||||||| ||||||||||||    
T  5338513 atatatatcaaggattacatacacatgattagaaggcaagc 5338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 21327097 - 21326901
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||| ||||| ||| || ||||||| ||||||||||||| ||||| |||||||||| ||||||    
T  21327097 atatatataaaccattatttacacttgaatagaaggcaagcagacaacaagctgcgccgttagacctttttggatggcaaaatcaatcctcgtgaacaca 21326998  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||||| | |||||||    
T  21326997 acattcatggacctaggagacataacattgctatgcatgaccttttgaactctatgtaaaaggtcaacagcctctggtgctaggaaatcgaaagtgt 21326901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 45614101 - 45613905
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||  |||||||||||||||||||||| ||| || |||| || ||||||| ||||| |||||||||||||||||||||||    
T  45614101 atatatataaaccattatttacagttgaatagaaggcaagcggacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtaaacaca 45614002  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||  |||||||| || |||||| | |||||||| |||||||||||  |||||||||||||||| ||||||| |||||||    
T  45614001 acattcatggacctaggagatttgacattgttatgcatgaacttttgaactctatgtagaaggctaacagcctctggtgcttggaaaccgaaagtgt 45613905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 35 - 213
Target Start/End: Original strand, 4501120 - 4501298
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||| ||||||||||||||| ||| || || | || |||||||| ||||||||| | ||||||||||||||||||||||||| | |    
T  4501120 attatttacacttgaatataaggcaagcggacaataagatgcgctgctagacctttttagatgacaaagctaatcctcgtaaacacaacattcatgaatc 4501219  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaa 213  Q
    |||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  4501220 taggagacatgacattgctatgcatgaacttttgaactctatgtagaaggtcaacaacctctggtgctagaaaaccaaa 4501298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 19277164 - 19277337
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgta--aacacaacattcatggacctaggagacat 144  Q
    ||||||||||||| |||| ||| ||| || |||| || ||||||||||||| ||||||||||  ||||   |||||||||||||||||||||||||||||    
T  19277164 tgaatagaaggcaggcgggcaataagctgcgccgctagacctttttggatggcaaaaccaattttcgtgtgaacacaacattcatggacctaggagacat 19277263  T
Q  145 gacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  19277264 gacattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgctaggaaaccgaaagtgt 19277337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 48539094 - 48539225
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||| | ||    
T  48539094 ctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctatgcatgaccttttggactctatgtagacgatc 48539193  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||| ||||| |||||||    
T  48539194 aacagcctctggtgctagaaaaccgaaagtgt 48539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 28517533 - 28517350
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||  ||| ||| ||| |||| || || || |||||||||| |||||||||||||||||||||||||||||||||||     
T  28517533 attacttacacatgaataggaggcagacgggcaacaagctgtgtcgctagacttttttggatggcaaaaccaatcctcgtaaacacaacattcatggact 28517434  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||| || |||| |||||||| ||| |||||||||||||||| | ||||| |||||||||  |||||||||    
T  28517433 taggagacataacattgttatgcataaccctttggactctatgtagaaggtcaactgtctctgatgctaggaagtcaaaagtgt 28517350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 5825138 - 5825305
Alignment:
Q  39 cttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagg 138  Q
    ||||||||||||||| |||||||| |  || ||| || ||||| | |||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5825138 cttacacatgaataggaggcaagcaggtaacaagctgcgccgtaagacctttttcgatggcaaaaccaatcctcgtaaacacaacatccatagacctagg 5825237  T
Q  139 agacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctagga 206  Q
    |||||| ||||||||| |||| |||||||  ||| ||||||||||||||||| |||||||||||||||    
T  5825238 agacataacattgctatgcataaccctttcgactctatgtagaaggtcaacaacctctggtgctagga 5825305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 24527502 - 24527633
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||||| |||||||||||| |||||||| |||||||| |||||||||||||    
T  24527502 ctttttggatgacaaaaccaatcctcgtgaatacaacattcatggaccaaggagaaatgacattgctatgcatgaccttttgaactctatgtagaaggtc 24527601  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||||| ||||||||||||  |||||||    
T  24527602 aaccgcctctcgtgctaggaaactgaaagtgt 24527633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 982797 - 982991
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| ||| || |||||||||||||| | | ||| ||| |||| || || ||||||||||||| ||| |||||||||||| ||||||    
T  982797 atatatataaaccattatttaaacttgaatagaaggcaaacaggcaacaagctgtgtcgctagacctttttggatggcaataccaatcctcgtgaacaca 982896  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    |||||||||||| ||| ||||||||||||| || |||||||| |||||||| ||||||||||| ||||| ||||||||||||| ||||| |||||    
T  982897 acattcatggacatagaagacatgacattgatatgcatgaccttttgaactctatgtagaaggccaacaacctctggtgctagaaaaccgaaagt 982991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 27521385 - 27521515
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||| |||||||| ||||||||||||||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacattcatagacttaggagacatgacattgttatgcatgaccttttgaactctatgtagaaggtca 27521484  T
Q  188 acagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||||| ||||||||||||||||||||    
T  27521485 acaacctctgatgctaggaaaccaaaagtgt 27521515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 217
Target Start/End: Original strand, 22197860 - 22198029
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    |||||||||| ||||||| ||| ||||||  |||  || |||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||    
T  22197860 tgaatagaagacaagcgggcaacaagttgcaccgccaagcctttttggatgacaaaatcaattatcgtaaacacaacattcattgacctaggagacatga 22197959  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtg 217  Q
    | ||||||  ||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||| ||||||    
T  22197960 cgttgcta-tcataaccttttgaactctatgtagaaggtcaacaacctctgatgctaggaaaccgaaagtg 22198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 217
Target Start/End: Complemental strand, 22239961 - 22239792
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    |||||||||| ||||||| ||| ||||||  |||  || |||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||    
T  22239961 tgaatagaagacaagcgggcaacaagttgcaccgccaagcctttttggatgacaaaatcaattatcgtaaacacaacattcattgacctaggagacatga 22239862  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtg 217  Q
    | ||||||  ||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||| ||||||    
T  22239861 cgttgcta-tcataaccttttgaactctatgtagaaggtcaacaacctctgatgctaggaaaccgaaagtg 22239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 218
Target Start/End: Complemental strand, 40726725 - 40726543
Alignment:
Q  36 ttacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacct 135  Q
    |||||||||||||||||| |||||||||| ||| ||| || |  |||| || |||||||||| ||||| |||||||| ||||||||||||||||||| ||    
T  40726725 ttacttacacatgaataggaggcaagcgggcaacaagctgcgatgttagacatttttggatggcaaaatcaatcctcataaacacaacattcatggatct 40726626  T
Q  136 aggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||  ||||| || |||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||| || |||||||    
T  40726625 aggagacatagcattgttatgcataaccctttggactctatgtagaaggtcaacaacctctgatgctatgaagccgaaagtgt 40726543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 43856788 - 43856914
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||  ||||| |||| |||||||||| |||||||||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||||||||    
T  43856788 tttttggatagcaaaatcaattctcgtaaacataacattcatggacctaggagtcatgacattgttgtgcatgaccctttgaactctatgtagaaggtca 43856887  T
Q  188 acagcctctggtgctaggaaaccaaaa 214  Q
    ||| ||||||||| |||||||||||||    
T  43856888 acaacctctggtgttaggaaaccaaaa 43856914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 10905049 - 10905162
Alignment:
Q  105 caatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctag 204  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| || ||||| | ||||||||| |||||||||||||||||  ||||||||||||    
T  10905049 caatccttgtaaacacgacattcatggacctaggagacatgacattgttatgcatggctctttgaactctatgtagaaggtcaacatactctggtgctag 10905148  T
Q  205 gaaaccaaaagtgt 218  Q
    | ||||||||||||    
T  10905149 gcaaccaaaagtgt 10905162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 45003143 - 45003010
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||||||| ||| || |||| || ||||||||||||| ||||| ||||| ||||||||||||||||||||| ||    
T  45003143 attacttacacatgaataggaggcaagcggacaataagctgcgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattcatggtcc 45003044  T
Q  135 taggagacatgacattgctacgcatgaccctttg 168  Q
    || ||||||| ||||||||| |||| || |||||    
T  45003043 tatgagacataacattgctatgcataactctttg 45003010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 25187177 - 25187002
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||| ||| ||| || |||| || | |||||| ||||  |||| ||||| | |  ||||||||||||||||| |    
T  25187177 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagatctttttagatggtaaaatcaatcattgggaacacaacattcatggatc 25187078  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    |||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||| ||||| ||| | |||||||    
T  25187077 taggagacatgacattgctatgcatgaccttttgaactctatatagaaggtcaacaacctctagtgttcggaaacc 25187002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 30216252 - 30216121
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||| ||||||||| | |||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||| ||||| |||| ||    
T  30216252 ctttttgaatgacaaaatcgatcctcgtgaacacaacattcatagacctaggagatatgacattgctatgcatgaccatttgaactttatgtggaagatc 30216153  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||  ||||| |||||||||||| |||||||    
T  30216152 aacaaactctgatgctaggaaaccgaaagtgt 30216121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 9281394 - 9281205
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    |||||||||||||||| ||||| ||||||| |||| |||| ||||| ||  ||  ||||||| |||||||||||  |||||||||| ||| |||||||||    
T  9281394 tatatatcaaagattaattacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaa 9281295  T
Q  123 cattcatggacctaggagacatgacat-----tgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||| |||||| || ||| ||||||||     ||||   |||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  9281294 cattaatggacttaagagtcatgacattgttgtgctgtacatgaccctttgaactctatgtagaaggtcaacaacatctggtgctaggaa 9281205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 9292365 - 9292176
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    |||||||||||||||| ||||| ||||||| |||| |||| ||||| ||  ||  ||||||| |||||||||||  |||||||||| ||| |||||||||    
T  9292365 tatatatcaaagattaattacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaa 9292266  T
Q  123 cattcatggacctaggagacatgacat-----tgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||| |||||| || ||| ||||||||     ||||   |||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  9292265 cattaatggacttaagagtcatgacattgttgtgctgtacatgaccctttgaactctatgtagaaggtcaacaacatctggtgctaggaa 9292176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 41117963 - 41117830
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||  ||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||| | ||| |||| |||||||||||| |    
T  41117963 tttttggatagcaaaatcaatcatcgtgaacacaacattcatggacctaggaaacatgacattgctatgcatgatcttttaaactctatgtagaaggtta 41117864  T
Q  188 acagcctctggtgctaggaaaccaaaagtgttga 221  Q
    ||| | ||||||| ||||||||| ||||||||||    
T  41117863 acaacatctggtgttaggaaaccgaaagtgttga 41117830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 42295378 - 42295249
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||| || || ||||||   |||||||  |||||||||||||    
T  42295378 ctttttggataacaaaactaatcatcgtaaacacaagattcatggacctaggagacatgacaatgttatgcatgatattttgaacgctatgtagaaggtc 42295279  T
Q  187 aacagcctctggtgctaggaaaccaaaagt 216  Q
    |||| || |||||| ||||||||| |||||    
T  42295278 aacaacccctggtgttaggaaaccgaaagt 42295249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 196
Target Start/End: Original strand, 34772657 - 34772804
Alignment:
Q  49 aatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgaca 148  Q
    |||||||| ||||| || || || ||| |||||||||| |||||| ||| ||||||||||  |||||||||||| |||||||||||||| | ||||||||    
T  34772657 aatagaagacaagcagataacaaattgcgccgttaaacttttttgaatggcaaaaccaattatcgtaaacacaatattcatggacctagaaaacatgaca 34772756  T
Q  149 ttgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctct 196  Q
    ||| || |||||||  |||||| | ||||||||||||||||| |||||    
T  34772757 ttgatatgcatgactttttgaagtttatgtagaaggtcaacaacctct 34772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 5972410 - 5972300
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||| |||||| |||||||||||||||||||||||| || || ||||| |||||||| ||| |||||||  |||||||| |||||||||||||    
T  5972410 ctttttggatggcaaaactaatcctcgtaaacacaacattcatagatctgggagaaatgacattactatgcatgacattttgaactctatgtagaaggtc 5972311  T
Q  187 aacagcctctg 197  Q
    |||| ||||||    
T  5972310 aacaacctctg 5972300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 23792908 - 23793056
Alignment:
Q  70 aagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttga 169  Q
    ||||||||||| |||  ||||||| |||| |  | ||||||| |||||||||| ||| || |||||||||||||| ||||| ||| | |||| |||||||    
T  23792908 aagttgtgccgctaagtctttttgaatgatagcatcaatccttgtaaacacaagatttatagacctaggagacattacattactatgtatgatcctttga 23793007  T
Q  170 actgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||| ||||||||||||| ||| |||||||| |||| |||||||||    
T  23793008 actgtatttagaaggtcaacaacctgtggtgctaagaaaacaaaagtgt 23793056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 45974845 - 45974731
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||| ||||||||||| ||| || |||  || |||||||||||||||||||   ||||| |||||||||||||||||| |||    
T  45974845 attatttacacttgaatagaagacaagcggacaacaagctgcgccactagacctttttggatgacaaaatttatccttgtaaacacaacattcatgaacc 45974746  T
Q  135 taggagacatgacat 149  Q
    |||||||||||||||    
T  45974745 taggagacatgacat 45974731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 23037457 - 23037568
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    ||||||| |||| ||||| |||||||||||||||||| |||||| |||||| |||| |||||||||||| |||| |||||||||||  || ||||| |||    
T  23037457 cctttttagatggcaaaatcaatcctcgtaaacacaaaattcatagacctaagagaaatgacattgctatgcataaccctttgaaccctacgtagatggt 23037556  T
Q  186 caacagcctctg 197  Q
    ||||| ||||||    
T  23037557 caacaacctctg 23037568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 27027824 - 27027758
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27027824 ctttttggatagcaaaaccaatcctcgtgaacacaacattcatggacctaggagacatgacattgct 27027758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 32584512 - 32584645
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgacccttt-gaactgtatgtagaagg 184  Q
    ||||||||||||  |||| ||||| | ||||||||||||||||| || ||| ||||||| |||||| || |||||| | ||| ||||| ||| |||||||    
T  32584512 cctttttggatggtaaaatcaatctttgtaaacacaacattcatcgatctatgagacataacattgatatgcatgatcttttggaactctatctagaagg 32584611  T
Q  185 tcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||| ||||||||||||||||||  |||||||    
T  32584612 tcaacaacctctggtgctaggaaacataaagtgt 32584645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 5714954 - 5715072
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||| |||||||||||||||| || ||||||||||||| ||||||||||||||||| |||||| || | |||| ||||||||||  ||||  || || |    
T  5714954 tttttagatgacaaaaccaatcttcataaacacaacatttatggacctaggagacataacattgttatgtatga-cctttgaactccatgttaaaagtga 5715052  T
Q  188 acagcctctggtgctaggaa 207  Q
    |||| |||||||||||||||    
T  5715053 acagtctctggtgctaggaa 5715072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 2520979 - 2520934
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaa 68  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  2520979 tatatatcaaagattaattacacatgaatagaaggcaagcggacaa 2520934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 2904233 - 2904353
Alignment:
Q  26 atatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 125  Q
    ||||||| ||||| ||||||||||||||||| ||  | ||||| ||| |  |||  ||| |||||||||||  ||||||||||  |||||||||||||||    
T  2904233 atatcaatgattaattacacatgaatagaagacatacagacaacaagctacgccactaa-cctttttggatagcaaaaccaattatcgtaaacacaacat 2904331  T
Q  126 tcatggacctaggagacatgac 147  Q
    |||| |||||||||| ||||||    
T  2904332 tcatagacctaggagtcatgac 2904353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 43334024 - 43333941
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaa 170  Q
    ||||||| ||| ||||||||||| || ||||| |||||||||| || |||||||||||| ||||| || |||||||| ||||||    
T  43334024 ctttttgaatggcaaaaccaatcatcataaactcaacattcatagatctaggagacatgtcattgatatgcatgaccttttgaa 43333941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 38839231 - 38839313
Alignment:
Q  79 cgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatga 161  Q
    ||||| || ||||||||||  |||||||||| |||||||||||||||||||||||||   | ||||||||||| || ||||||    
T  38839231 cgttagacatttttggatggtaaaaccaatcttcgtaaacacaacattcatggacctgataaacatgacattgttatgcatga 38839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 38766185 - 38766258
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaat 108  Q
    ||||||||||||||||||| |||||||||| ||| ||| || || | || ||||||||||||| ||||||||||    
T  38766185 attacttacacatgaataggaggcaagcgggcaacaagctgcgcagctagacctttttggatggcaaaaccaat 38766258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 29054729 - 29054816
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggaga 141  Q
    ||||||||||  ||| ||| || |||| ||| ||||| |||||| |||||||||||||| |||| || |||||||| |||||||||||    
T  29054729 aaggcaagcgagcaataagctgcgccgctaatcctttatggatggcaaaaccaatcctcttaaaaactacattcatagacctaggaga 29054816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 36559037 - 36558935
Alignment:
Q  111 tcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    ||||||||||||||||||||||||||  |||||||| |||  || |||||||| ||| |||| |||| |||| ||||||  | | ||||||||| |||||    
T  36559037 tcgtaaacacaacattcatggacctataagacatgatatttatatgcatgaccattt-aactctatggagaaagtcaacgacttttggtgctagaaaacc 36558939  T
Q  211 aaaa 214  Q
    ||||    
T  36558938 aaaa 36558935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 30659825 - 30659724
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaa--ggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaaca 119  Q
    ||||||||||||||||| ||| ||||||||| ||  |  |||||||||| |||||| |  |||| |||||||||||| |||||| ||||  |||||||||    
T  30659825 atatatatcaaagattaattatacatgaataaaaaagataagcggacaacaagttgcgatgttagacctttttggataacaaaatcaattatcgtaaaca 30659726  T
Q  120 ca 121  Q
    ||    
T  30659725 ca 30659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 44525927 - 44526001
Alignment:
Q  116 aacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    |||||||||||||||||  ||||||||||||||||| || ||||   | ||||||||  ||||||||||||||||    
T  44525927 aacacaacattcatggatataggagacatgacattgttatgcatattcttttgaactccatgtagaaggtcaaca 44526001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 6635130 - 6635041
Alignment:
Q  114 taaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgcta 203  Q
    ||||||||||||| ||||| |||||||||||||||||| || ||| ||   ||| || | || |||||||||||||| |||||| |||||    
T  6635130 taaacacaacatttatggatctaggagacatgacattgttatgcaagattattttaattttacgtagaaggtcaacaacctctgatgcta 6635041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 2904348 - 2904404
Alignment:
Q  157 catgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaa 213  Q
    ||||||||||| |||| || |||||||||||||| ||||| |||||||||| |||||    
T  2904348 catgaccctttaaactttacgtagaaggtcaacaacctctagtgctaggaagccaaa 2904404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 31889720 - 31889588
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    ||||||| ||||  ||| ||||||||||| ||| ||||||||||| || |||||||||  ||||  | |||||  ||||| ||| ||  ||| |||| ||    
T  31889720 ttacacacgaatgaaagacaagcggacaataagatgtgccgttaagccattttggatggtaaaattattcctcaaaaacataacgtttgtggtcctatga 31889621  T
Q  140 gacatgacattgctacgcatgaccctttgaact 172  Q
    |||||||||||  || |||||| ||||||||||    
T  31889620 gacatgacattattatgcatgatcctttgaact 31889588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 32336285 - 32336359
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacatt 126  Q
    |||||||||||||||||| |||||||||| |||     ||||||||||||| ||||| ||||| | || |||||||||||    
T  32336285 tgaatagaaggcaagcgggcaaaaagttgcgcc-----acctttttggatggcaaaatcaatctttgtgaacacaacatt 32336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 38766259 - 38766302
Alignment:
Q  124 attcatggacctaggagacatgacattgctacgcatgacccttt 167  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||    
T  38766259 attcatggacctaggagacataacattgctatgcataacccttt 38766302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 38832163 - 38832226
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatga 98  Q
    |||||||||| |||||||| |||||||||| ||| ||| || |||| || ||||||||||||||    
T  38832163 attacttacatatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatga 38832226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 41071795 - 41071736
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||  | |||| ||||||||    
T  41071795 ctttttggatgacaaaatcaatcttcgtaaacataacattcataaatctagaagacatga 41071736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 23890302 - 23890253
Alignment:
Q  158 atgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||| |||||||||| ||||||  ||||||||| ||||||||||||||||    
T  23890302 atgatcctttgaactctatgtaagaggtcaacaacctctggtgctaggaa 23890253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 209
Target Start/End: Original strand, 21472864 - 21473038
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||| |||||||| ||| |||||| |||| || ||||||||||||| |||||||| ||||| | ||| |||||||||||||||    
T  21472864 attatttacacttgaatagaatgcaagcgggcaataagttgcgccgctagacctttttggatggcaaaaccagtcctcctgaacgcaacattcatggacc 21472963  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaac 209  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  21472964 taggagacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtgctaggaaac 21473038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 22346756 - 22346939
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||||||| ||| || |||| || ||||||||||||| |||||| ||||||||| ||||||||||||||  |||    
T  22346756 attatttacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaactaatcctcgtgaacacaacattcataaacc 22346855  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||| ||| |||||||| |||||||| | ||||||||||||||| |||||| | |||||||||| |||||||    
T  22346856 taggagacatgacatttctatgcatgaccttttgaactctgtgtagaaggtcaacaacctctgctactaggaaaccgaaagtgt 22346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 24177757 - 24177582
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||| ||||||| ||| ||| ||  ||| || |||||||||| || |||||||||||||||| |||||||||||||||||||    
T  24177757 attatttacacttgaatagaagacaagcgggcaacaagctgcaccgctagacctttttggttggcaaaaccaatcctcgtgaacacaacattcatggacc 24177658  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    ||||||| |||||||||||| |||||||  |||||||| |||||||||||| ||||||||||| ||||||||||||    
T  24177657 taggagatatgacattgctatgcatgactttttgaactctatgtagaaggtaaacagcctctgatgctaggaaacc 24177582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 28041386 - 28041190
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| | |||||||| ||||||||||| ||| |  |||| || |||||||||||||  |||| |||||||| | | ||||    
T  28041386 atatatataaaccattatttacacttaaatagaagacaagcggacaacaagctccgccgctagacctttttggatggaaaaatcaatcctcatgagcaca 28041287  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||| |||  ||||||||||||||| |||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  28041286 acattcatggacttagaggacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaaccgcctctggtgctaggaaaccgaaagtgt 28041190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 34644480 - 34644610
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |||||| || |||| |||||||| ||| ||||||||||||||    
T  34644480 tttttggatggcaaaatcaatcatcgtaaacacaacattcatggacctaggagacataacattgatatgcataaccctttggactctatgtagaaggtca 34644579  T
Q  188 acagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||||| ||||||||| || |||||||    
T  34644580 acaacctctgatgctaggaagccgaaagtgt 34644610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 2898575 - 2898744
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    |||||||||| |||| ||| || ||| |  |||| ||| |||||||||||| ||||| |||||||| |||||||||||||||||  | || |||||||||    
T  2898575 tgaatagaagacaagtggataacaagctacgccgctaagcctttttggatggcaaaatcaatcctcttaaacacaacattcatgatcgtatgagacatga 2898674  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
     |||| || |||||| | |||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  2898675 tattgttatgcatgatcttttgaactctatgtagaaggtcaacaacctctggtgctaggaaaccgaaagt 2898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 20260038 - 20259860
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||| |||||||||| |||  || ||| ||  || |||| || ||||||||||||| ||||||||||||   ||||||||||||| ||  || || ||    
T  20260038 ttacacttgaatagaagacaatggggcaacaaactgcgccgctagacctttttggatggcaaaaccaatccatataaacacaacatttattaacttatga 20259939  T
Q  140 gacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||| ||| |||||||| |||||||| ||||||||||||||||| |||||||||||| |||||| |||||||    
T  20259938 gacatgacattactatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgctaagaaaccgaaagtgt 20259860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 45659842 - 45659711
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    |||||||||| ||||||||||  ||||||||||||| ||||| || |||||||||||||||||||||||| |||||| | |||||||| ||  |||||||    
T  45659842 acctttttgggtgacaaaaccggtcctcgtaaacacgacatttattgacctaggagacatgacattgctatgcatgatcttttgaactcta--tagaagg 45659745  T
Q  185 tcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||| ||||||| | |||||||    
T  45659744 tcaacagcctctggtgataggaaatcgaaagtgt 45659711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 868647 - 868513
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||||| ||| ||| || |||| || ||||||||||||| ||||||||||||| || ||||||  ||||||||||     
T  868647 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatccttgtgaacaca--attcatggact 868550  T
Q  135 taggagacatgacattgctacgcatgaccctttgaac 171  Q
    |||||||||||||||||||| |||||||| |||||||    
T  868549 taggagacatgacattgctatgcatgaccttttgaac 868513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 5453956 - 5454057
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||| || |||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5453956 attacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatgacaaaaccaatccttgtaaacacaacattcatggacc 5454055  T
Q  135 ta 136  Q
    ||    
T  5454056 ta 5454057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 30688417 - 30688534
Alignment:
Q  34 gattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    ||||| ||||||||||||||| ||||||||| ||| ||| || |||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30688417 gattaattacacatgaatagatggcaagcgggcaacaagctgcgccgctaggcctttttggataacaaaaccaatcctcgtaaacacaacattcatggac 30688516  T
Q  134 ctaggagacatgacattg 151  Q
    | ||||| ||||||||||    
T  30688517 ccaggagtcatgacattg 30688534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 7213104 - 7213294
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaa-------acacaacattc 127  Q
    |||| |||||| |||||||||||||||||| ||| |||||| |||| || |||||||||||||  |||||||||| |||| |       |||||||||||    
T  7213104 attatttacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggtaaaaccaatcatcgtgattcgtgaacacaacattc 7213203  T
Q  128 atggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||||||||||  || |||||||  |||||||| |||| ||||| ||||||| ||||  |||||||||||| |||||||    
T  7213204 atggacctagaagacatgacattattatgcatgacattttgaactttatgcagaagctcaacagtctctaatgctaggaaaccgaaagtgt 7213294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 31737568 - 31737386
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||| | ||||| ||| || ||||  || |||||||||||| ||||| |||||||||||||||| | ||||||||| |    
T  31737568 attatttacacttgaatagaaggcaaacagacaacaagctgcgccgccaagcctttttggatggcaaaatcaatcctcgtaaacacta-attcatggatc 31737470  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||| |||| |||||| || |||||||| |||||||| ||||||||| ||||| |||||||  |||||| ||| | |||||||    
T  31737469 taggaaacataacattgatatgcatgaccttttgaactctatgtagaatgtcaatagcctctaatgctagaaaatcgaaagtgt 31737386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 2764382 - 2764512
Alignment:
Q  77 gccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtat 176  Q
    |||| ||||||||||||||||  |||| ||||| |||||||||||||||| ||||||||| ||||||| |||||| |  |||| |||||||| ||| |||    
T  2764382 gccgctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatttatggacctaagagacataacattgatttgcataaccctttggactttat 2764481  T
Q  177 gtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||||||||||||| |||||| |||||||||    
T  2764482 gtagaaggtcaacaacctctgatgctaggaa 2764512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 4611062 - 4611161
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    |||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||    
T  4611062 tgaataaaaggcaagcggacaacaagctgtgctgttagacctttttggatgacaaaatcaatcatcgtgaacacaatattcatggacctaggagacatga 4611161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 38731545 - 38731651
Alignment:
Q  110 ctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaac 209  Q
    ||||||||||||| ||||||||||||||||| |||||||||  |  ||||||||||||||||| |||||||||||| |||| |||||||||||| ||| |    
T  38731545 ctcgtaaacacaatattcatggacctaggagtcatgacattattgtgcatgaccctttgaactctatgtagaaggttaacaacctctggtgctaagaagc 38731644  T
Q  210 caaaagt 216  Q
    |||||||    
T  38731645 caaaagt 38731651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 39 - 216
Target Start/End: Original strand, 47459548 - 47459724
Alignment:
Q  39 cttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagg 138  Q
    ||||||||||||||| || ||||| ||||| ||| || || | || ||||||||| ||| | ||| |||| ||||||||||||||||| || ||| ||||    
T  47459548 cttacacatgaataggagccaagcagacaacaagctgcgc-gctagacctttttgaatggctaaatcaattctcgtaaacacaacatttatagacttagg 47459646  T
Q  139 agacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    |||||| ||||||||| ||||   |||||| ||| |||||||||||||||| ||||||| | ||||||| ||||||||    
T  47459647 agacataacattgctatgcatattcctttggactctatgtagaaggtcaactgcctctgatactaggaagccaaaagt 47459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 35387906 - 35387747
Alignment:
Q  24 atatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac 123  Q
    ||||||||| || || ||||||||||||||||| |||| |||||| ||| |  |||||||||| |||||| ||||||||||||||| | ||||||||| |    
T  35387906 atatatcaatgactaattacacatgaatagaagacaagtggacaacaagctacgccgttaaacttttttgaatgacaaaaccaatcattgtaaacacatc 35387807  T
Q  124 attcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    |       || ||||||||||||||||| || ||||| ||||||||||| |||||||||| ||||||    
T  35387806 a-------acttaggagacatgacattgatatgcatgtccctttgaactctatgtagaagatcaaca 35387747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 1114114 - 1114023
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacatt 126  Q
    |||| |||||| |||||||||| ||||||| ||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1114114 attatttacacttgaatagaagccaagcgggcaacaagctgtgccgttagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 1114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 4862170 - 4862052
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggt 199  Q
    |||| |||||||||||| ||||||||||||||| ||| | ||| |||||||| || ||||||||||||||||| ||||||||||||||||| | | ||||    
T  4862170 aaaatcaatcctcgtaatcacaacattcatggatctaagggacgtgacattgttatgcatgaccctttgaactctatgtagaaggtcaacaacttttggt 4862071  T
Q  200 gctaggaaaccaaaagtgt 218  Q
    | ||||||| | |||||||    
T  4862070 gttaggaaatcgaaagtgt 4862052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 29169940 - 29169856
Alignment:
Q  134 ctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||| ||||||||||||||||||| |||||||    
T  29169940 ctaggagacatgacattgctgtgcatgaccttttgaactctatgtagaaggttaacaacctctggtgctaggaaaccgaaagtgt 29169856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 19035327 - 19035426
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||| ||||||| ||| || |||| || |||||||||||||||||||||||||||||| ||||||    
T  19035327 atatatataaaccattatttacacttgaatagaaggcaatcggacaacaagctgcgccgctagacctttttggatgacaaaaccaatcctcgtgaacaca 19035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 48841328 - 48841169
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||  ||| |||||||||| |||||| || | || || |||||||||  ||||| ||||||||||||||| || |||||| ||      
T  48841328 attacttacacatgaatatgaggtaagcggacaacaagttgcgctgctagacttttttggattgcaaaatcaatcctcgtaaacataatattcatagatt 48841229  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcct 194  Q
    |||||||||| |||||  || |||| || ||||  ||| |||||||||||||||| ||||    
T  48841228 taggagacataacattattatgcataactctttagactctatgtagaaggtcaactgcct 48841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 50161683 - 50161485
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| ||||| ||||| || ||||||||||||  || ||| ||| ||||||| ||| || |||| |||  ||||  |||||||| ||||||||    
T  50161683 atatatatcaatgattaattacaaataaatagaaggcaaaagggcaacaagctgtgccgctaagccgttttagatagcaaattcaatcctcttaaacaca 50161584  T
Q  122 acattcatggacctaggag-----acatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagt 216  Q
    ||||||||||||||| | |     ||||| |||||||  |||||| |||||||||| ||||||||| |||| || ||| |||||||||| | ||||||||    
T  50161583 acattcatggacctatgtgtcgtaacatg-cattgctctgcatgatcctttgaactctatgtagaatgtcatcaacctttggtgctagggagccaaaagt 50161485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 18616322 - 18616230
Alignment:
Q  112 cgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctag 204  Q
    |||||| |||| ||| ||||||||| || |||| | ||||||| ||||||||||||||| | ||||||||| |||||||||||| ||||||||    
T  18616322 cgtaaatacaatatttatggacctaagatacataatattgctatgcatgaccctttgaattatatgtagaatgtcaacagcctcgggtgctag 18616230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 28493577 - 28493477
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||| ||| ||||||| ||  || |||| || ||||||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  28493577 attatttacacttgaatagaagacaaacggacaacaaactgcgccgctagacctttttggatggcaaaatcaatcctcgtgaacataacattcatggacc 28493478  T
Q  135 t 135  Q
    |    
T  28493477 t 28493477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 45835380 - 45835319
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgaca 148  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  45835380 ctttttggatggcaaaatcaatcctcgtaaacacaacattcatagacctagaagagatgaca 45835319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 6790909 - 6790800
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaac-caatcctcgtaaacacaacattcatggac 133  Q
    ||||||||||||||||||||||||| ||||  || ||  ||||||| ||   |||||||||||||||||  | ||  ||||||||| |||||||||||||    
T  6790909 attacttacacatgaatagaaggcaggcgggtaacaaactgtgccgctaggtctttttggatgacaaaaatctattatcgtaaacataacattcatggac 6790810  T
Q  134 ctaggagaca 143  Q
    |||| |||||    
T  6790809 ctagaagaca 6790800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 21934280 - 21934357
Alignment:
Q  77 gccgttaaacctttttggatgacaaaaccaatcctcgtaaacac-aacattcatggacctaggagacatgacattgct 153  Q
    |||| ||| |||||||||||| |||||||||||||| |||| || |||||||||||| ||||||||||  ||||||||    
T  21934280 gccgctaaccctttttggatggcaaaaccaatcctcttaaatacaaacattcatggaactaggagacaaaacattgct 21934357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 29170443 - 29170322
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| ||||||||||||||| ||| || ||  ||  |||||| ||||||||  ||| |||||| |||  | |||||| ||    
T  29170443 atatatataaattattatttacacttgaatagaaggcaagtggataacaaactgcaccgttagacctttttaaatggcaaaacaaattgttgtaaacgca 29170344  T
Q  122 acattcatggacctaggagaca 143  Q
    ||||||||||||||||||||||    
T  29170343 acattcatggacctaggagaca 29170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 50314791 - 50314697
Alignment:
Q  113 gtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    |||||||||  |||||||||| |||||| |||||||||| | || || |||||||||||| ||||||||| ||||||| | ||| ||| |||||||    
T  50314791 gtaaacacattattcatggac-taggagtcatgacattgttgcgtataaccctttgaactctatgtagaaagtcaacaacatcttgtgttaggaaa 50314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6590889 - 6590840
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaa 71  Q
    ||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  6590889 atatatatcatgtattacttacacaagaatagaaggcaagcggacaaaaa 6590840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 894105 - 894184
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaa 101  Q
    |||||||||||| |||||||  | |||||||||||||||||| | || || |||  ||||||||| |||||| |||||||    
T  894105 atatatatcaaatattacttttatatgaatagaaggcaagcgaaaaacaaattgcaccgttaaacttttttgaatgacaa 894184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 13181181 - 13181118
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattg 151  Q
    ||||||||||||||||||||||  | |||| ||| |||| |||||| ||| |||||||||||||    
T  13181181 tttttggatgacaaaaccaatctccataaatacagcattgatggacgtagaagacatgacattg 13181118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 40516115 - 40515989
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    ||||||||||||| ||  ||||||||||| || ||   | |||||| ||||| ||||  ||||| ||||  |||||||||||||||||||| | ||| ||    
T  40516115 ttacacatgaatataaaacaagcggacaataaattacactgttaaatcttttcggattgcaaaatcaataatcgtaaacacaacattcatgaatcta-ga 40516017  T
Q  140 gacatgacattgctacgcatgacccttt 167  Q
    ||||| | ||||| | ||||||||||||    
T  40516016 gacattatattgccatgcatgacccttt 40515989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 25376078 - 25375961
Alignment:
Q  34 gattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca--acattcatgg 131  Q
    ||||| ||||||||||||||||||||| |  |||| |||||  | |||||  |||||||||||   ||||| ||| ||| ||||||||  |||||||||     
T  25376078 gattaattacacatgaatagaaggcaaacaaacaacaagttacgtcgttaggcctttttggatagtaaaactaattctcataaacacaacacattcatga 25375979  T
Q  132 acctaggagacatgacat 149  Q
    || |||||| ||||||||    
T  25375978 acataggagtcatgacat 25375961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 37932370 - 37932280
Alignment:
Q  128 atggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||| ||||||||||||| ||| ||| ||   ||| ||||  || ||||| ||||||| |||||||||||||||| || |||||||    
T  37932370 atggacctatgagacatgacattactatgcacgaatgtttaaactcaatatagaatgtcaacatcctctggtgctaggaagccgaaagtgt 37932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 51067252 - 51067195
Alignment:
Q  83 aaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggaga 141  Q
    |||| ||||||||||||||||| ||||||||| || || ||||| ||||||||||||||    
T  51067252 aaacttttttggatgacaaaactaatcctcgtgaatacgacatt-atggacctaggaga 51067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 7483787 - 7483839
Alignment:
Q  77 gccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcat 129  Q
    |||| ||| ||||||| |||| |||||| |||| |||||||||||||||||||    
T  7483787 gccgctaagcctttttagatggcaaaactaatcttcgtaaacacaacattcat 7483839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 11128435 - 11128363
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaact 172  Q
    ||||| |||| | ||||||||| |||| || |||||||||||||| |||||| || |||||||| ||| ||||    
T  11128435 aaaacaaatcattgtaaacacatcatttatagacctaggagacataacattgatatgcatgaccttttaaact 11128363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 16500034 - 16500078
Alignment:
Q  174 tatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||||||  |||||||||  |||||||||    
T  16500034 tatgtagaaggtcaacagcctctaatgctaggaagtcaaaagtgt 16500078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 42919832 - 42919904
Alignment:
Q  146 acattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||  |||||||||||| |||| |||||||||||| ||||  ||||  |||| ||||| |||||||||    
T  42919832 acattgctctgcatgaccctttaaactctatgtagaaggttaacaatctctactgcttggaaatcaaaagtgt 42919904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 13413212 - 13413395
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||| ||||||||||| ||| || |||||||  |||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  13413212 attatttacacttgaatagaagacaagcggacaacaagctgagccgttaggcctttttggatggcaaaaccaattctcataaacacaacattcatggacc 13413311  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| |||| | ||||| |||||||    
T  13413312 taggagacatgacattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctctgctgcttgaaaaccgaaagtgt 13413395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 41868153 - 41867971
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||| |||||||| ||| |||||| |||| || | |||||||| || ||||||||||||||||||||||||||||||||||||    
T  41868153 attatttacacttgaatagaaagcaagcgggcaacaagttgcgccgctagatctttttgg-tggcaaaaccaatcctcgtaaacacaacattcatggacc 41868055  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | ||||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||    
T  41868054 tgggagacatgacattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtgctaggaacccgaaagtgt 41867971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 17344486 - 17344682
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| |||||||||||||||| | ||| ||| || |||| || ||||||||||||   |||| |||||||||||||||||    
T  17344486 atatatataaatcattatttacacttgaatagaaggcaagccggcaacaagctgcgccgatagacctttttggatcgaaaaatcaatcctcgtaaacaca 17344585  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||  |||||||    
T  17344586 acattcatggacctaggagacatgacattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctatggtgctaggaaactgaaagtgt 17344682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 4413312 - 4413129
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||||||||| || ||| ||| || |||| || ||||||||||||| ||||| |||||||| | |||||||||||||||||||    
T  4413312 attatttacacttgaatagaaggcaagtgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcatgaacacaacattcatggacc 4413213  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||| |||||| |||||||| |||||||  |||||||||||||||||  |||||||||||||||||| |||||||    
T  4413212 taggagacatgactttgctatgcatgaccttttgaaccctatgtagaaggtcaacaatctctggtgctaggaaaccgaaagtgt 4413129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 9685649 - 9685478
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    |||||| ||||||||||| ||| ||| || |||| || ||||||||||||| ||||| ||||| | || |||||||||||||||||||||||||||||||    
T  9685649 tgaatataaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaacaatctttgtgaacacaacattcatggacctaggagacatga 9685550  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||  ||||||| |||||||| ||| ||||||||| ||||||||| ||||||| ||| |||||||||    
T  9685549 cattgctatccatgaccttttgaactctatatagaaggtccacagcctctagtgctagaaaatcaaaagtgt 9685478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 18745200 - 18745031
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||| ||||||  ||| ||| || |||| || ||||||||||||| |||||||||||||  |||||||||||||||| ||||    
T  18745200 attatttacacttgaatagaagacaagcgagcaataagctgcgccgctagacctttttggatggcaaaaccaatccttataaacacaacattcatagacc 18745101  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctag 204  Q
    ||||| | |||||||||||| |||||| | |||||||| ||||||||||| ||||||||| |||||||||    
T  18745100 taggaaatatgacattgctatgcatgatcttttgaactctatgtagaaggccaacagcctatggtgctag 18745031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 28224861 - 28225044
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||||| |||||||| || ||||||| ||| ||| || |||| || ||||||||||||| |||||| |||| || |||||||||||||||| ||||    
T  28224861 attacttacaaatgaataggagacaagcgggcaataagctgcgccgctagacctttttggatggcaaaacaaatcttcataaacacaacattcattgacc 28224960  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| | ||||  | |||| | |||||| ||| ||||||||||||||||| ||||||  |||||||| || |||||||    
T  28224961 taggagacataatattgtcatgcataatcctttggactctatgtagaaggtcaacaacctctgaagctaggaagccgaaagtgt 28225044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 218
Target Start/End: Complemental strand, 7761056 - 7760908
Alignment:
Q  70 aagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttga 169  Q
    |||||| |||| ||| |||||||||||| ||||| ||||  |||||| |||| ||||| || || || ||||||| |||||||||||||||| |||||||    
T  7761056 aagttgcgccgctaagcctttttggatgtcaaaatcaattttcgtaagcacatcattcttgaacttatgagacatcacattgctacgcatgatcctttga 7760957  T
Q  170 actgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| ||||||||||||||||| ||||||||| ||| |||||||| ||||    
T  7760956 actctatgtagaaggtcaacaacctctggtgatagaaaaccaaaggtgt 7760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 5532270 - 5532453
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||||  |||||||| |||| |||||||| ||| | || || |||||| |||||||  || |||||||||| |||| ||||||| |||||||||    
T  5532270 atatatatcaagaattacttatacat-aatagaagacaaacagataacaagttgcgccgttaggccgttttggatgagaaaatcaatccttgtaaacaca 5532368  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
     |||||||| || |||||| |||| ||||| |  ||||||||||||||||| |||||||||| |||||| ||| ||||||||||||    
T  5532369 -cattcatgaacttaggagtcatggcattgttgtgcatgaccctttgaactctatgtagaagctcaacaacctatggtgctaggaa 5532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 44686348 - 44686460
Alignment:
Q  106 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctagg 205  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||| | | |||||||||||||||||  ||||| |||||||    
T  44686348 aatcctcgtaaacacaacattcacggacctaggagacataacattgctatgcataaccctttggaatctatgtagaaggtcaacaaactctgatgctagg 44686447  T
Q  206 aaaccaaaagtgt 218  Q
    || || |||||||    
T  44686448 aagccgaaagtgt 44686460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 19161977 - 19161846
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||||||||| ||||||||| |||||||  |||||| ||||||||||||||||||||| || |||||||| |||||||| |||||| |||||     
T  19161977 ctttttggatgacaaaatcaatcctcgaaaacacactattcattgacctaggagacatgacattgatatgcatgaccttttgaactctatgtaaaaggta 19161878  T
Q  187 aacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | |||||||| ||| ||  ||||| |||||||    
T  19161877 agcagcctctagtgttacaaaaccgaaagtgt 19161846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 27494172 - 27494304
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||||| |||||||| |||||||| | ||| ||| || ||||||| ||||||||||||| ||||||||||  |||||||||||| |||||| |||     
T  27494172 attacttacatatgaataggaggcaagcaggcaacaagctgcgccgttagacctttttggatggcaaaaccaatattcgtaaacacaatattcatagact 27494271  T
Q  135 taggagacatgacattgctacgcatgacccttt 167  Q
    |||||||||| |||||||||  ||| |||||||    
T  27494272 taggagacataacattgctatacataacccttt 27494304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 27502273 - 27502379
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    ||||||||||||  ||||| ||||| ||||||||||||||||||| || ||||||||||||| ||||||| |||| |||||||| | | |||||||||||    
T  27502273 acctttttggattgcaaaatcaatcttcgtaaacacaacattcatagatctaggagacatgatattgctatgcataaccctttggattctatgtagaagg 27502372  T
Q  185 tcaacag 191  Q
    |||||||    
T  27502373 tcaacag 27502379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 3825639 - 3825760
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||||||||| | ||| || ||||||||||||| |||| ||||| |||||||||||||||| ||||||  |||||||||  |||| |||||||    
T  3825639 ctttttggatgacaaaatcgatcttcataaacacaacatttatggtcctagaagacatgacattgctatgcatgattctttgaactcgatgttgaaggtc 3825738  T
Q  187 aacagcctctggtgctaggaaa 208  Q
    |||| ||| || ||||||||||    
T  3825739 aacaacctttgatgctaggaaa 3825760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 13147357 - 13147163
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    |||||||||||||||| |||||||||||||||||  || |   ||| || ||| ||||| |  ||||||| |||||||||| ||||  ||||||| ||||    
T  13147357 tatatatcaaagatta-ttacacatgaatagaagataaacatgcaataaattgcgccgtaaggcctttttagatgacaaaatcaattttcgtaaatacaa 13147259  T
Q  123 cattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
     ||||||| || ||| ||||| ||||||| |  ||| ||||||||| ||| |||| ||||||||||||  |||||||| ||| |||||||||||||    
T  13147258 tattcatgaacttagaagacaagacattgttgtgcacgaccctttgtactatatgaagaaggtcaacaatctctggtgttagaaaaccaaaagtgt 13147163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 16352037 - 16351928
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||| |||| ||||| ||||| ||||||||| || ||||||| ||||| |||||||||||||| |  |||||||| |||||||| ||||||||||||||    
T  16352037 tttttagatggcaaaaacaatcatcgtaaacataatattcatgtacctaagagacatgacattgttgtgcatgaccatttgaactctatgtagaaggtca 16351938  T
Q  188 acagcctctg 197  Q
    ||| ||||||    
T  16351937 acaacctctg 16351928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 3208490 - 3208406
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaaca 119  Q
    |||| |||||| |||||||||||||||||| ||| ||| || |||| |||||||||||||||| |||||||||||||||||||||    
T  3208490 attatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctaaacctttttggatggcaaaaccaatcctcgtaaaca 3208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 210
Target Start/End: Complemental strand, 2886810 - 2886686
Alignment:
Q  86 cctttttggatgacaaaac-caatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    ||||||||||||||||||  |||||||| ||||||||||||| ||||||| | |||| |||| ||||||| |||||  | |||||||| |||||| |||     
T  2886810 cctttttggatgacaaaaatcaatcctcataaacacaacatttatggacc-acgagatatgatattgctatgcatgctcttttgaactctatgtaaaaga 2886712  T
Q  185 tcaacagcctctggtgctaggaaacc 210  Q
    ||||||||||||| |||| |||||||    
T  2886711 tcaacagcctctgatgcttggaaacc 2886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 23485171 - 23485038
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaaccttttt-ggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatg 145  Q
    |||||| ||||||||| ||||| ||| || ||||| |||||||||| || || ||||||||||  | ||||||||||| ||||||||||||||||||||     
T  23485171 tgaataaaaggcaagccgacaacaagctgcgccgtcaaaccttttttggttggcaaaaccaatttttgtaaacacaacgttcatggacctaggagacata 23485072  T
Q  146 acattgctacgcatgaccctttgaactgtatgta 179  Q
     ||||| || |||||| | |||||||| ||||||    
T  23485071 gcattgttatgcatgatcttttgaactctatgta 23485038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 20142875 - 20142788
Alignment:
Q  131 gacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||||||||||| || | |||||| |||||||| |||||| |||||||||| ||| || |||||| |||||||||||||    
T  20142875 gacctaggagacatgacattgttatgtatgaccttttgaactctatgtataaggtcaacaacctttgatgctagaaaaccaaaagtgt 20142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 32029281 - 32029170
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||||| |||||| ||  |||| |||||||||| | |||||||  ||||  ||||||||||||| || | ||||| ||||||||| ||||||||||||    
T  32029281 cctttttgaatgacagaattaatcttcgtaaacacgatattcatgatcctataagacatgacattgttatggatgactctttgaactctatgtagaaggt 32029182  T
Q  186 caacagcctctg 197  Q
    ||||||||||||    
T  32029181 caacagcctctg 32029170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 34814967 - 34814874
Alignment:
Q  132 acctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgttgaaagca 226  Q
    ||||| ||||||| |||||| || |||||||| |||||||| |||||||||||||||||| |||||||| |||| |||| ||||||| |||||||    
T  34814967 acctaagagacataacattgttatgcatgaccatttgaactctatgtagaaggtcaacagtctctggtgttagg-aaccgaaagtgtcgaaagca 34814874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 44685053 - 44684955
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    ||||||| ||||| ||||| ||| ||| |||||||||||||||||||| ||  |||||| | |||| || ||||||||||||||||| |||||||||||    
T  44685053 cctttttagatgaaaaaactaattctcataaacacaacattcatggacttataagacataatattgttatgcatgaccctttgaactctatgtagaagg 44684955  T

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Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 30602338 - 30602430
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgta 115  Q
    |||||||||| ||||| |||||||||||||||||||| |||| ||| ||| || || | ||  |||||||||||| |||||||||||||||||    
T  30602338 tatatatcaaggattaattacacatgaatagaaggcatgcgggcaacaagctgcgctgctaggcctttttggatggcaaaaccaatcctcgta 30602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 41702123 - 41702209
Alignment:
Q  25 tatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcct 111  Q
    |||||||| |||||||||||||||||||||||||||| || ||| ||| || |||  ||  |||||||||||| |||||||||||||    
T  41702123 tatatcaaggattacttacacatgaatagaaggcaagtgggcaacaagctgcgccactaggcctttttggatggcaaaaccaatcct 41702209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 11921398 - 11921300
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||| | |||| |||||| ||||||||||||||||||||||||| ||| || | ||||      || |||||||||||| |||||||||||||    
T  11921398 ctttttggatggcgaaactaatcctagtaaacacaacattcatggacctagaagatataaaattg------ataaccctttgaactctatgtagaaggtc 11921305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 42122678 - 42122763
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacac 120  Q
    |||| |||||| ||||||||||||||||| |||| ||| || |||| || || |||||||||| |||||||| |||||||||||||    
T  42122678 attatttacacttgaatagaaggcaagcgaacaataagctgcgccgctagacttttttggatggcaaaaccagtcctcgtaaacac 42122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 15515406 - 15515286
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| ||| |||||||||| | | ||| ||  || |||| || || |||||||||| |||||||||||||||| ||||||    
T  15515406 atatatataaaccattatttacacttgagtagaaggcaaacaggcaacaaactgcgccgctagacttttttggatggcaaaaccaatcctcgtgaacaca 15515307  T
Q  122 acattcatggacctaggagac 142  Q
    |||||  ||||||||||||||    
T  15515306 acattggtggacctaggagac 15515286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 33612711 - 33612610
Alignment:
Q  115 aaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaa 214  Q
    |||||||||||||||||||||||| |||| |||||||||| |   |||||| |||||  | ||||||| ||||||| |||| |||| |||||| ||||||    
T  33612711 aaacacaacattcatggacctaggggacaagacattgctatgagcgaccctctgaac--tctgtagaatgtcaacaacctccggtgttaggaagccaaaa 33612614  T
Q  215 gtgt 218  Q
    ||||    
T  33612613 gtgt 33612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 2626104 - 2626001
Alignment:
Q  24 atatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac 123  Q
    |||||||||  |||| ||||||||||||||||||||||||||||| ||| || ||||||| |||||| | |||    |||  |||| |||||||||||||    
T  2626104 atatatcaataattaattacacatgaatagaaggcaagcggacaacaagctgcgccgttagacctttgtagatagttaaattaatcttcgtaaacacaac 2626005  T
Q  124 attc 127  Q
    ||||    
T  2626004 attc 2626001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 44720236 - 44720355
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||| |||||||||||||||  ||||||||||||  ||| ||||||||| |||| |  | |||| || |||||| |||||||||| |||||| || || |    
T  44720236 ttttaggatgacaaaaccaaatctcgtaaacacattatttatggacctatgagataaaatattgttatgcatgatcctttgaactttatgtaaaaagtga 44720335  T
Q  188 acagcctctggtgctaggaa 207  Q
    ||| ||||||||| ||||||    
T  44720336 acaacctctggtgttaggaa 44720355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 1296273 - 1296175
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaag 183  Q
    ||||||||||||   ||||||||| ||| |||||| ||||||||| |||  |||| |||||| ||| ||| ||||||||||||||||| || |||||||    
T  1296273 acctttttggattgtaaaaccaattctcataaacaaaacattcatagacacaggaaacatgatattactatgcatgaccctttgaactctacgtagaag 1296175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 214
Target Start/End: Complemental strand, 8036677 - 8036549
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattg--ctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||| ||||||||| ||||| | ||||| |||| ||  | ||||||||||||||||||||||   || |||| | |||||||||| |||||| |||||    
T  8036677 tttttgaatgacaaaatcaatcattgtaaagacaatatctacggacctaggagacatgacattgatatatgcataaacctttgaactctatgtaaaaggt 8036578  T
Q  186 caacagcctctggtgctaggaaaccaaaa 214  Q
    ||||| |||||| || || ||| ||||||    
T  8036577 caacaacctctgatgttacgaagccaaaa 8036549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 20142935 - 20142872
Alignment:
Q  99 caaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgacc 163  Q
    |||||||||| ||||| |||||||||| |||| |||||||||||||||||||| || ||||||||    
T  20142935 caaaaccaatactcgtcaacacaacatccatg-acctaggagacatgacattgttatgcatgacc 20142872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 10587214 - 10587176
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaa 60  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  10587214 atatatatcaaggattacttacacatgaatagaaggcaa 10587176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 20143204 - 20143119
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaa 107  Q
    |||||||| ||  |||| |||||  |||||||||||||| | ||||| |||||| |||| || ||||||||||||| |||||||||    
T  20143204 atatatataaaccattatttacatttgaatagaaggcaaacagacaacaagttgcgccgctagacctttttggatggcaaaaccaa 20143119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 24765178 - 24765255
Alignment:
Q  91 ttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttg 168  Q
    ||||||| |||||  |||| || ||| || |||||||||||||||| |||||||||||||| || | |||||||||||    
T  24765178 ttggatgccaaaattaatcatcataaccagaacattcatggacctaagagacatgacattgttatggatgaccctttg 24765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 3262336 - 3262244
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgta 179  Q
    |||||| |||| ||||| |||| |||||||||| || ||| ||||||||| ||| ||||||| || |  ||| ||||||||||||| ||||||    
T  3262336 cttttttgatggcaaaatcaattctcgtaaacataatatttatggacctatgagtcatgacactgatgtgcaagaccctttgaactctatgta 3262244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 29808001 - 29808109
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggt 199  Q
    |||| ||||||| ||||| || ||||||||||||||||||  |||||  ||| |  ||||||||  || |||| |||||| |||||||||| |||| | |    
T  29808001 aaaatcaatccttgtaaatacgacattcatggacctaggattcatgatgttgttgtgcatgaccacttaaactctatgtaaaaggtcaacaacctccgat 29808100  T
Q  200 gctaggaaa 208  Q
    |||||||||    
T  29808101 gctaggaaa 29808109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 10296733 - 10296638
Alignment:
Q  74 tgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttga 169  Q
    ||||||| |||  ||||||||||| |||||| ||||||| ||||| |||||| ||||||| ||||  |||| ||||||| |  ||| |||||||||    
T  10296733 tgtgccgctaactctttttggatggcaaaactaatcctcttaaacgcaacatccatggacttagggtacataacattgccatacattaccctttga 10296638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 2888404 - 2888449
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggac 133  Q
    ||||||||||||||||  ||| |||||||||||||||||| |||||    
T  2888404 tttttggatgacaaaattaattctcgtaaacacaacattcgtggac 2888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 2888463 - 2888560
Alignment:
Q  121 aacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||| |||||  || |||| ||||||||| |  |||||||  |||||||  | ||||||||||||||| ||||| ||| |||||| ||||||||||    
T  2888463 aacatttatggatttaagagatatgacattgttgtgcatgacattttgaaccttgtgtagaaggtcaacaacctcttgtgttaggaagccaaaagtgt 2888560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 24762977 - 24762900
Alignment:
Q  91 ttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttg 168  Q
    ||||||| |||||  |||| || ||| || |||| ||||||||||| |||||||||||||| || | |||||||||||    
T  24762977 ttggatgccaaaattaatcatcataaccagaacactcatggacctaagagacatgacattgttatggatgaccctttg 24762900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 34250233 - 34250153
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgta 115  Q
    ||||||||||||||||||  |||||| | ||||| || ||| ||  ||| | |||||||||||||||||  ||||||||||    
T  34250233 attacttacacatgaatatgaggcaaaccgacaacaaattgcgctattagatctttttggatgacaaaattaatcctcgta 34250153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 17249551 - 17249368
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||| |||||||||| |||||||||| ||| ||| || |||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||     
T  17249551 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacacaacattcatgaact 17249452  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||||||  ||| | |||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  17249451 taggagacataacattgctatacataatcctttggactctatgtagaaggtcaactgcctctgatgctaggaagccaaaagtgt 17249368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 47 - 210
Target Start/End: Original strand, 959454 - 959616
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    ||||||||| |||||||   || ||||||||| ||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |    
T  959454 tgaatagaaagcaagcgagaaataagttgtgctgttaggcctttttagatgacaaaatcaatcctcgtaaacacaacattcatggacctaggagacacaa 959553  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    |||||||| |||||||| |||||||| || |||||||||||||| |||||||||||||||||||    
T  959554 cattgctatgcatgaccttttgaact-tacgtagaaggtcaacaacctctggtgctaggaaacc 959616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 33220957 - 33220774
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||| || |||| || ||||||| ||||| ||||||||||  |||||||| |||||||||||||||    
T  33220957 attacttacacatgaataggaggcaagcggccaacaagctgcgccgctagaccttttaggatggcaaaaccaattatcgtaaacgcaacattcatggacc 33220858  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| |||||  ||||||||| |||| |||||||| ||| ||||||||||||||||| |||| | ||||||||| || |||||||    
T  33220857 tagaagacacaacattgctatgcataaccctttggactatatgtagaaggtcaacaacctcggatgctaggaagccgaaagtgt 33220774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 3137488 - 3137362
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    |||||||||||| |||||||| ||| ||| ||||||  | | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3137488 ttacacatgaatggaaggcaaacgggcaacaagttgcactgctaagcctttttggatggcaaaaccaatcctcgtaaacacaacattcatggacctagga 3137389  T
Q  140 gacatgacattgctacgcatgaccctt 166  Q
    ||||||||||||||| |||||||||||    
T  3137388 gacatgacattgctatgcatgaccctt 3137362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 4206788 - 4206659
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaa 188  Q
    ||||||||| |||||||||||||||||||||| | |||||| |||||||| ||||||||||||  | |||||||| |||||||| |||||||||||||||    
T  4206788 ttttggatggcaaaaccaatcctcgtaaacactatattcattgacctaggtgacatgacattgtcatgcatgaccttttgaactctatgtagaaggtcaa 4206689  T
Q  189 cagcctctggtgctaggaaaccaaaagtgt 218  Q
    || |||||||||||||||| || |||||||    
T  4206688 caacctctggtgctaggaacccgaaagtgt 4206659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 34304369 - 34304540
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    ||||||| |||||  ||| ||| || |||||||| || ||||||||||||  ||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  34304369 tgaataggaggcagacgggcaacaatttgtgccgctatacctttttggattgcaaaatcaatcctcgtaaatacaacattcatagacctatgagacatga 34304468  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
     ||||||| |||| || ||||| ||| ||||||||||||||||| | |||| ||||||||| || |||||||    
T  34304469 tattgctatgcataactctttggactctatgtagaaggtcaacatcatctgatgctaggaagcccaaagtgt 34304540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 4166114 - 4165985
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaa 188  Q
    ||||||||| |||||||||||||||||||||| | ||| || |||||||| ||||||||||||  | |||||||| ||| |||| |||||||||||||||    
T  4166114 ttttggatggcaaaaccaatcctcgtaaacactatatttattgacctaggtgacatgacattgtcatgcatgaccttttaaactctatgtagaaggtcaa 4166015  T
Q  189 cagcctctggtgctaggaaaccaaaagtgt 218  Q
    || |||||||||||||||| || |||||||    
T  4166014 caacctctggtgctaggaacccgaaagtgt 4165985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 32115629 - 32115737
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    |||||||| |||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| | |||||||||    
T  32115629 acctttttagatagcaaaatcaatcatcgtaaacacaacattcatggacctaggagacatgacattgttatgcatgaccttttgaactctttgtagaagg 32115728  T
Q  185 tcaacagcc 193  Q
    |||||||||    
T  32115729 tcaacagcc 32115737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 34168769 - 34168897
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| || ||||| ||||||||||||||||||||||||| | | |||||| |||| ||  |||||||||||  |||||||||||||||| ||||||    
T  34168769 atatatataaatgattaattacacatgaatagaaggcaagcgggcgacaagttgcgccgctaggcctttttggatagcaaaaccaatcctcgt-aacaca 34168867  T
Q  122 acattcatggacctaggagacatgacattg 151  Q
    ||||||||||| ||||||| ||||||||||    
T  34168868 acattcatggatctaggagtcatgacattg 34168897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 29338260 - 29338153
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggt 199  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||  ||||||||||||||||   |||||||    
T  29338260 aaaatcaatccttgtaaacacaacattcatggacctaggagtcatgacattgatgtgcatgaccctttgaaccatatgtagaaggtcaacgatctctggt 29338161  T
Q  200 gctaggaa 207  Q
    ||||||||    
T  29338160 gctaggaa 29338153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 28009228 - 28009078
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    ||||||||||||||||||||| ||||||| ||| || | |||||  |||||||||||  ||||| |||| || ||||| ||||| |||||||||||||||    
T  28009228 ttacacatgaatagaaggcaaacggacaataagctgcgtcgttaggcctttttggattgcaaaatcaattctggtaaagacaacgttcatggacctagga 28009129  T
Q  140 gacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaaca 190  Q
    | |||||||||| |  | ||||||||||||||| |||  ||||||||||||    
T  28009128 gtcatgacattgttgtgtatgaccctttgaactatatacagaaggtcaaca 28009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 28625792 - 28625964
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| | |||||||||||| |||  || ||| || |||| || | ||||||| ||| ||||| |||||  |||||||||||||||||| ||||    
T  28625792 attatttacacttaaatagaaggcaaacgggtaataagctgcgccgctagatctttttgaatggcaaaatcaatctccgtaaacacaacattcatagacc 28625891  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    || |||| ||||||| | || |||||||| |||||||| |||||||||| |||||| |||||||||||||||||    
T  28625892 tatgagatatgacat-gttatgcatgaccttttgaactttatgtagaagctcaacaacctctggtgctaggaaa 28625964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 34554471 - 34554351
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| || ||||||||| |||||||  ||||||| ||| |||| ||||||||| ||    
T  34554471 cctttttggatgacaaaatcaatcctcgtaaacacaaaattcat-gacttacgagacatgatattgctatacatgaccttttaaactctatgtagaaagt 34554373  T
Q  186 caacagcctctggtgctaggaa 207  Q
    ||| ||| ||||||||||||||    
T  34554372 caatagcatctggtgctaggaa 34554351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 357962 - 357779
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||||||||| |||||||| || ||| | ||||| ||| | ||||| || || ||||| |||| |||||  |||| ||||||||||||||||||||||||    
T  357962 attacttacatatgaataggagacaaaccgacaacaagctatgccgctatacatttttagatggcaaaattaatcttcgtaaacacaacattcatggacc 357863  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgtt 219  Q
    ||||||| || ||||||||| || | | | |||| ||| |||||||||||||| || |||||  || ||||||| ||||||||||    
T  357862 taggagagataacattgctatgcttaatcatttggactctatgtagaaggtcatcaacctctaatgttaggaaa-caaaagtgtt 357779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 45819 - 45740
Alignment:
Q  139 agacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  45819 agacataacattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtgctaagaaaccgaaagtgt 45740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 7749342 - 7749441
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||||||||||| |||||||||| ||| ||| ||  ||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7749342 attagttacacatgaataggaggcaagcgggcaacaagctgcaccgctagaccttttaggatggcaaaaccaatcctcgtaaacacaacattcatggacc 7749441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 28543258 - 28543374
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||| ||||||||||||||||||||||||  ||||| |||| || | |||||  |||| |||||||||||||| |||||| || ||| |||||||    
T  28543258 attacttacgcatgaatagaaggcaagcggacaattagttgcgccgctagatcttttcagatggcaaaaccaatcctcttaaacataatatttatggacc 28543357  T
Q  135 taggagacatgacattg 151  Q
    ||||| |||| ||||||    
T  28543358 taggaaacataacattg 28543374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 24016262 - 24016377
Alignment:
Q  99 caaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctgg 198  Q
    ||||||||||  ||||||||| || ||| ||| || ||||||||||||||||  |  ||||||||||||||||| |||||| ||  |||||| | |||||    
T  24016262 caaaaccaattatcgtaaacataatatttatgtacttaggagacatgacattcttgtgcatgaccctttgaactctatgtaaaaaatcaacaacatctgg 24016361  T
Q  199 tgctaggaaaccaaaa 214  Q
    ||||||||||||||||    
T  24016362 tgctaggaaaccaaaa 24016377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 26225773 - 26225646
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    |||||||||||||||||||||||||| ||||||||| || ||| ||||||| |||||| |  || ||  |||||| |||||||||| ||||| ||||| |    
T  26225773 ctttttggatgacaaaaccaatcctcataaacacaaaatccatcgacctagaagacataatgtttctctgcatgagcctttgaactctatgttgaaggcc 26225674  T
Q  187 aacagcctctggtgctaggaaaccaaaa 214  Q
    |||| | ||| ||||||| || ||||||    
T  26225673 aacaacatctagtgctagaaagccaaaa 26225646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 218
Target Start/End: Original strand, 3714768 - 3714961
Alignment:
Q  25 tatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaaca 124  Q
    |||||||||||||| |||||||| |||| |||  |||  || || ||| ||||| ||||   |||| || |||  |||| ||||||| | ||||||||||    
T  3714768 tatatcaaagattaattacacataaataaaagataagtagataataagctgtgctgttaggtctttgtgaatggtaaaatcaatccttgcaaacacaaca 3714867  T
Q  125 ttcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||  || |||||||||||||| |  ||||||  |||| |||| |||||||||| |||| || || |||||||| |||  |||||||||    
T  3714868 ttcatggatttatgagacatgacattgttgtgcatgattctttaaactctatgtagaagatcaagagtctttggtgctaagaagtcaaaagtgt 3714961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 13398376 - 13398256
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||||||||| ||| | |||||||||||||||| ||| | |||| || | |||||||| || |||| | | |||||||| ||||||||| |||    
T  13398376 ctttttggatgacaaaatcaaccatcgtaaacacaacatttatgcatctagaagtcgtgacattgttatgcatcatcttttgaactctatgtagaatgtc 13398277  T
Q  187 aacagcctctggtgctaggaa 207  Q
    |||| | |||| || ||||||    
T  13398276 aacaacttctgatgttaggaa 13398256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 34415404 - 34415480
Alignment:
Q  142 catgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||||| |||||||| |||||||| ||| |||||||||||| || | ||||| ||||||||| |||||||    
T  34415404 catgacattgctatgcatgaccatttgaactctatatagaaggtcaactgcatttggtgttaggaaacctaaagtgt 34415480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 7200710 - 7200627
Alignment:
Q  106 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaac 189  Q
    |||||| ||||| ||||||||||| || ||||||||||| |  |||||| ||||||| ||||||| | |||||| |||||||||    
T  7200710 aatccttgtaaatacaacattcattgatctaggagacataatgttgctatgcatgactctttgaaatttatgtaaaaggtcaac 7200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 749562 - 749501
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaat 108  Q
    |||||||||||||||||||||| ||| |||| ||| | || |||||||||| ||||| ||||    
T  749562 tgaatagaaggcaagcggacaacaagctgtgtcgtcagacgtttttggatggcaaaatcaat 749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 30514179 - 30514135
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacat 144  Q
    |||||||||| | ||||||| |||||| |||||||||||||||||    
T  30514179 aaaaccaatctttgtaaacagaacattgatggacctaggagacat 30514135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 35310309 - 35310492
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||||| ||| ||| || | |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  35310309 attacttacacatgaataggaggcaagcgggcaacaagctgcgtcgttaaacctctttggatggcaaaaccaattctcgtaaacacaacattcatggacc 35310408  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||| || |||  |||||||| ||| |||||||||||| ||||||||||| ||| ||||| || |||||||    
T  35310409 taggagacataacattgatatgcaaaaccctttggactctatgtagaaggttaacagcctctgatgccaggaagccgaaagtgt 35310492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 32270054 - 32269870
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaa 122  Q
    ||||||| ||| |||| |||||| ||||||||||||||||||  || ||| ||  ||| ||  | |||||||||| | ||| ||||||||||||||||||    
T  32270054 tatatataaaatattatttacacttgaatagaaggcaagcgggtaacaagctgc-ccgctatgcttttttggatggcgaaatcaatcctcgtaaacacaa 32269956  T
Q  123 cattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||  ||| |||||||||||| ||||| |||||||||||    
T  32269955 cattcatggacctaggagacatgacattgctatgcatgaccttttgaacttcatgcagaaggtcaacaacctctagtgctaggaaa 32269870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 430463 - 430646
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||| ||||||||||| |||||||| ||| | ||| ||  ||| || ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  430463 attacttgcacatgaataggaggcaagcagacnacaagctgcaccgatagacctttttggatggcataatcaatcctcgtaaacacaacattcatggacc 430562  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| ||||| ||| |||| |||||||| | | |||||||||||||||| ||||||| ||||| |||  |||||||||    
T  430563 taggagacataacattactatgcataaccctttggaatctatgtagaaggtcaactgcctctgatgctatgaagacaaaagtgt 430646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 42921546 - 42921741
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||| ||  |||| |||||| ||||||||||||||| ||  || ||| || |||| || | ||||||||||| ||||||||||||| |||||||||    
T  42921546 atatatataaatcattatttacacttgaatagaaggcaagtgggaaacaagctgcgccgctagatctttttggatggcaaaaccaatccttgtaaacaca 42921645  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    | ||| |||||| ||||||||||||||||| || |||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||| |||||||    
T  42921646 atatt-atggacttaggagacatgacattgttatgcatgaccttctgaactctatgtagaaggccaacaacctctggtgctaggaaaccgaaagtgt 42921741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 13167156 - 13166973
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||||||||||| ||||||| || ||| ||| || |||| || | |||||||||| ||| || ||||| |||||||| |||||||||||||||    
T  13167156 attaattacacatgaataggaggcaagtgggcaacaagctgcgccgctagatctttttggataacagaatcaatcatcgtaaacccaacattcatggacc 13167057  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||||  |||||||| |||| |||||||| ||| |||||||||||||||||| ||||| ||||||||| || |||||||    
T  13167056 taggagacataccattgctatgcataaccctttggactctatgtagaaggtcaacagtctctgatgctaggaagccgaaagtgt 13166973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 22188848 - 22188733
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    ||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||| |||| || |||||||| |||||||| ||||||||||||||    
T  22188848 tttttggatgacaaaaccaattctcgtaaacacaacattcatgaatctaggagacatgatattgttatgcatgaccttttgaactctatgtagaaggtca 22188749  T
Q  188 acagcctctggtgcta 203  Q
    ||||||||||||||||    
T  22188748 acagcctctggtgcta 22188733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 37873897 - 37873701
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaagg-caagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||| |||||  ||||||||||||||| | ||| |||  || ||||||  ||| ||  ||||||| |||  ||||| |||||||| ||||||||    
T  37873897 tatatatcaatgattaaatacacatgaatagaaagacaaacgggtaacaagttgcaccgctaggccttttttgatagcaaaatcaatcctcttaaacaca 37873798  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||| ||||||| || |||||||||| |  ||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  37873797 acattcatagacctagaagtcatgacattgttctgcatgaccctttgaactctatgtagaaggtcaacaacctctggtgctaggaagccaaaagtgt 37873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 2566322 - 2566194
Alignment:
Q  54 aaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgct 153  Q
    |||||||| || ||| |||||| |||| || ||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  2566322 aaggcaagtgggcaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattgatggatctaggagacatgacattgct 2566223  T
Q  154 acgcatgaccctttgaactgtatgtagaa 182  Q
    | |||||||| |||||||| |||||||||    
T  2566222 atgcatgaccttttgaactctatgtagaa 2566194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 207
Target Start/End: Complemental strand, 25663278 - 25663106
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||| || || |||||| ||  ||| ||| || | ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  25663278 attacttacacataaaaaggaggcaaacgagcaacaagctgcgtcgttagacctttttggatgacaaagccaatcctcgtaaactcaacattcatggacc 25663179  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaa 207  Q
    |||| ||||| |||||| || |||| |||||||| ||| |||||||||| |||||| | |||| |||||||||    
T  25663178 taggggacataacattgatatgcataaccctttggactctatgtagaagatcaacaacttctgatgctaggaa 25663106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 23023454 - 23023591
Alignment:
Q  33 agattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatgga 132  Q
    ||||| ||||||||| |||| ||||||| ||||||| ||| || |||  ||  |||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  23023454 agattgcttacacataaataaaaggcaaacggacaataagatgcgcccctaggcctttttggatgacaaaatcaatcttcgtaaacacaacattcatcga 23023553  T
Q  133 cctaggagacatgacattgctacgcatgaccctttgaa 170  Q
    ||||||||||||||||||| || |||||||| ||||||    
T  23023554 cctaggagacatgacattgatatgcatgaccttttgaa 23023591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 27336556 - 27336737
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| || ||||||||||| ||  ||  ||| || |||||||| |||| ||||| ||||||| ||||| |||||||||||||||     
T  27336556 attacttacacatgaataggagacaagcggacaataaactgcaccgctagaccttttttgatggcaaaatcaatccttgtaaaaacaacattcatggact 27336655  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||||||  ||| ||| |||   || |||||||||||||||| ||||||| ||||||||| ||| ||||||    
T  27336656 taggagacataacattgctatacataaccattt--tctctatgtagaaggtcaactgcctctgatgctaggaagccacaagtgt 27336737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 34335207 - 34335363
Alignment:
Q  44 acatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagaca 143  Q
    |||||||||||| ||||||||  || ||||||||||| ||    ||||| | |||||||| ||||| |||||||||||| ||| ||||  ||||||||||    
T  34335207 acatgaatagaatgcaagcgggtaacaagttgtgccgctaggtgtttttaggtgacaaaatcaatcatcgtaaacacaatatttatgggtctaggagaca 34335306  T
Q  144 tgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtg 200  Q
    ||| |||| ||||||||| || ||||||| |||||||||||||||||||||||||||    
T  34335307 tgagattgttacgcatgatccgttgaactctatgtagaaggtcaacagcctctggtg 34335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 15292259 - 15292089
Alignment:
Q  47 tgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatga 146  Q
    ||||||||||||||| || ||| ||  || ||||  || | |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||  |||    
T  15292259 tgaatagaaggcaagtgggcaacaaactgcgccgccaagcttttttggatggcaaaatcaatcctcataaacacaacattcatggacctaggagatgtga 15292160  T
Q  147 cattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||| |||||||| |||||||| | |||||||| |||| | ||||| ||||||| |||| ||||||||    
T  15292159 cattgctatgcatgaccttttgaact-tttgtagaagatcaataacctctagtgctagaaaactaaaagtgt 15292089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 24113422 - 24113571
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacac 120  Q
    |||||||||||| ||| | ||||| ||||||||||||||| ||  ||| ||||||||||  |||||||||||| |||| |||  |||| || ||||| ||    
T  24113422 aatatatatcaaggataaattacatatgaatagaaggcaaacgagcaacaagttgtgccactaaacctttttgaatgataaagtcaattcttgtaaaaac 24113521  T
Q  121 aacattcatggacctaggagacatgacattgctacgcatgaccctttgaa 170  Q
    ||||||||||||||||| ||||||||||||| || |||||| | ||||||    
T  24113522 aacattcatggacctagaagacatgacattgttatgcatgatcatttgaa 24113571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 38875567 - 38875671
Alignment:
Q  102 aaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgc 201  Q
    |||||||| ||||||||||||||| ||| ||||||||||||| ||||||| || |||||||| |||||||| || ||||||||||| |||||||||||||    
T  38875567 aaccaatcatcgtaaacacaacat-cattgacctaggagacaagacattgttatgcatgaccttttgaactctacgtagaaggtcagcagcctctggtgc 38875665  T
Q  202 taggaa 207  Q
    ||||||    
T  38875666 taggaa 38875671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 33692298 - 33692118
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    ||||||||||||||||||| |||||||| | ||| ||| || |||| || | |||||||||||  ||||||||   ||||||||| |||||||||| |||    
T  33692298 attacttacacatgaataggaggcaagcaggcaacaagctgcgccgctagatctttttggatggaaaaaccaa--atcgtaaacagaacattcatgaacc 33692201  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    || ||||||| |||||| || |||| |||||||| ||  |||||||||||||||||| ||||| ||||| ||| || |||||||    
T  33692200 tatgagacataacattgttatgcat-accctttggacactatgtagaaggtcaacagtctctgatgctaagaagccgaaagtgt 33692118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 15832910 - 15833103
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| ||||| ||||| ||||||| ||| |||||| |||| |||||| ||| ||| | ||||  ||| | |||||| ||||||||| |||||     
T  15832910 atatatatcaaggattaattacagatgaataaaagacaagcgaacaataagttgcgccattagatctttaaggaaggcaaaactaatcctcgtgaacacg 15833009  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||| | ||||||||| |||||||| ||  ||||||| |||||||| ||| ||||   |||||| | ||||||||||||||  |||||||||    
T  15833010 acattcatgaatctaggagacgtgacattgttatacatgaccatttgaactctatataga---tcaacaacatctggtgctaggaagtcaaaagtgt 15833103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 15809897 - 15810081
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    ||||||||||| ||||| ||||| ||||||| ||| |||||| |||| |||||| | | |||  |||||  | | | ||||| |||||||||| |||||     
T  15809897 atatatatcaaggattaattacagatgaataaaagacaagcgaacaataagttgcgtcattaggcctttaagaaaggcaaaatcaatcctcgtgaacacg 15809996  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgacc-ctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaa 208  Q
    |||||||||| ||||||||||||||||||||||  |||||||  |||||||| ||| |   ||||||||| ||||| |||||||||||    
T  15809997 acattcatgggcctaggagacatgacattgctatacatgaccattttgaactctatat---aggtcaacaacctctcgtgctaggaaa 15810081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 26212765 - 26212655
Alignment:
Q  99 caaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctgg 198  Q
    |||||||||||||| | || ||||||||||||||| |||||||||| | ||||| |  ||||||  |||||||| |||||||||||| || |||||||||    
T  26212765 caaaaccaatcctcatgaaaacaacattcatggacttaggagacataatattgccatacatgacattttgaactctatgtagaaggttaatagcctctgg 26212666  T
Q  199 tgctaggaaac 209  Q
    ||||| |||||    
T  26212665 tgctaagaaac 26212655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 14423600 - 14423714
Alignment:
Q  87 ctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtc 186  Q
    ||||||||||| ||||||||||||| || ||||||  ||| ||||||||| |||||||||||||| || | || |||   | |||| |||||||||||||    
T  14423600 ctttttggatggcaaaaccaatccttgtgaacaca--atttatggacctaagagacatgacattgttatgaattacc---ttaactctatgtagaaggtc 14423694  T
Q  187 aacagcctctggtgctagga 206  Q
    ||||||||||| ||||||||    
T  14423695 aacagcctctgatgctagga 14423714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 23424064 - 23423962
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||||||||| ||||| || ||||||||| ||| || ||  ||||| |||||||||||| | | |||| |||||||| | ||||||||||||||    
T  23424064 tttttggatgacaaaatcaatcttcataaacacaatattgatagaagtaggatacatgacattgcaatgaatgatcctttgaaatctatgtagaaggtca 23423965  T
Q  188 aca 190  Q
    |||    
T  23423964 aca 23423962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 15506843 - 15506742
Alignment:
Q  53 gaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgc 152  Q
    |||||||| ||  ||| |||||| |||||||  ||||||| ||||  |||| ||||||||||||||||||||||| | |  |||||||||||||||||||    
T  15506843 gaaggcaaacgagcaacaagttgcgccgttaggccttttttgatggtaaaatcaatcctcgtaaacacaacattcgtaggtctaggagacatgacattgc 15506744  T
Q  153 ta 154  Q
    ||    
T  15506743 ta 15506742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 204
Target Start/End: Original strand, 27294346 - 27294468
Alignment:
Q  82 taaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtaga 181  Q
    ||||||||||| |||| |||||  | | ||| ||||||   ||||||||||||||| |||||| |  ||| ||  | ||||| |||||||| ||||||||    
T  27294346 taaacctttttagatggcaaaattagttctcataaacaactcattcatggacctagaagacataatgttgttatacgtgaccatttgaactatatgtaga 27294445  T
Q  182 aggtcaacagcctctggtgctag 204  Q
    ||||||||| |||||||||||||    
T  27294446 aggtcaacaacctctggtgctag 27294468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 7716105 - 7716225
Alignment:
Q  95 atgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcct 194  Q
    ||||||||| ||||| ||||||||| |||||||||  ||  ||   |||||| |||| || |||| | |||||||||| |||||| |||  ||||| |||    
T  7716105 atgacaaaatcaatcatcgtaaacagaacattcatttacaaag---acatgatattgttatgcataatcctttgaactttatgtaaaagaccaacaacct 7716201  T
Q  195 ctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| |||||||||||||    
T  7716202 ctggtgctagaaaaccaaaagtgt 7716225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 22819830 - 22819737
Alignment:
Q  89 ttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaa 182  Q
    ||||| ||||||||| ||||| || |||||||||||||||| ||  ||  |||||| ||||||||| ||| ||| ||||||||||| |||||||    
T  22819830 ttttgaatgacaaaatcaatcttcataaacacaacattcatagatttaacagacataacattgctatgcacgactctttgaactgtgtgtagaa 22819737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 11005757 - 11005825
Alignment:
Q  53 gaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||||| ||| ||| || |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  11005757 gaaggcaagcgggcaacaagctgcgccgctaagcctttttggatggcaaaaccaatcctagtaaacaca 11005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 26010408 - 26010277
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggt 185  Q
    |||||||| ||||||||| |||| |||| ||| | |||||| ||||| ||| ||||||  | | | ||| |||| | |||||||| | || |||||||||    
T  26010408 cctttttgtatgacaaaatcaattctcgaaaatataacatttatggatctaagagacacaaaagttctatgcataatcctttgaa-tctacgtagaaggt 26010310  T
Q  186 caacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||| | ||||||||| |||||||||||||||||    
T  26010309 caataacctctggtgataggaaaccaaaagtgt 26010277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 8100468 - 8100574
Alignment:
Q  88 tttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtca 187  Q
    |||||||||| ||||| ||||| ||| ||| |||||||| | | |||||| ||||||||||||| || ||||||  |||| |||| || |||||||||||    
T  8100468 tttttggatggcaaaatcaatcatcgcaaa-acaacatttacg-acctagaagacatgacattgatatgcatgaatctttaaactctacgtagaaggtca 8100565  T
Q  188 acagcctct 196  Q
    ||| |||||    
T  8100566 acaacctct 8100574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 19260230 - 19260318
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaa 188  Q
    ||||| |||| ||||||||| |||||||||| |  ||  |||||| |||||| || | ||||||||||||||| || ||||||||||||    
T  19260230 aaaacaaatcatcgtaaacataacattcatgaatatataagacattacattgttatgtatgaccctttgaactctaagtagaaggtcaa 19260318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 34475953 - 34476005
Alignment:
Q  86 cctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagg 138  Q
    |||||||||| |  |||| ||||| ||||||||||||||||||||||||||||    
T  34475953 cctttttggacggaaaaaacaatcttcgtaaacacaacattcatggacctagg 34476005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 41343581 - 41343509
Alignment:
Q  139 agacatgacattgctacgcatgaccctttgaactgt-atgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    |||||||| |||| || |||||| |||||||||| | |||||||||| ||||| ||||||||||||| |||||    
T  41343581 agacatgatattgttatgcatgatcctttgaactattatgtagaaggccaacaacctctggtgctagaaaacc 41343509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 2917607 - 2917524
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgac-aaaaccaatcctcgtaaa 117  Q
    ||||| ||||||||||||| |||||||| | ||| ||  || |||| || ||||||||||||| | ||||||||||||||||||    
T  2917607 attacctacacatgaataggaggcaagcaggcaacaaactgcgccgctagacctttttggatggcaaaaaccaatcctcgtaaa 2917524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 12033292 - 12033383
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacatt 126  Q
    |||| |||||| | |||||||| |||| ||| || ||| ||  |||||| | | ||||||||| ||||||||||| ||||||||||||||||    
T  12033292 attatttacacttaaatagaagacaagtggataataagctgcaccgttagatcattttggatggcaaaaccaatcatcgtaaacacaacatt 12033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 35993353 - 35993302
Alignment:
Q  21 aatatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaag 72  Q
    |||||||||||| |||||  ||||||||||||||| ||||||||| ||||||    
T  35993353 aatatatatcaatgattaactacacatgaatagaaagcaagcggaaaaaaag 35993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 39231692 - 39231649
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcgga 65  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||    
T  39231692 atatatatcaaatattacttacacatgaatagaagacaaacgga 39231649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 3114315 - 3114249
Alignment:
Q  106 aatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaact 172  Q
    |||| ||||||||||||||||||  ||||| ||||  ||||||||| |  |||||||||||||||||    
T  3114315 aatcttcgtaaacacaacattcacagaccttggagttatgacattgttgtgcatgaccctttgaact 3114249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 27355806 - 27355717
Alignment:
Q  100 aaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaac 189  Q
    ||||||||| ||||| |||||||| |  ||||| ||||||||||  |||||  || | ||||  ||||||||| ||||||||||||||||    
T  27355806 aaaaccaattctcgttaacacaacttctatggatctaggagacaatacattattatgtatgagactttgaactctatgtagaaggtcaac 27355717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 16017039 - 16017171
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctagga 139  Q
    ||||||| ||||| |||||| ||   ||||||| || ||||| || | ||||| |||| ||||| ||||| || |||| || |||  |||  ||||||||    
T  16017039 ttacacaggaataaaaggcaggccatcaaaaagctgcgccgtaaaccgtttttagatggcaaaatcaatcatcttaaaaaccacacccataaacctagga 16017138  T
Q  140 gacatgacattgctacgcatgaccctttgaact 172  Q
    ||||  ||||||||| |||||||| ||||||||    
T  16017139 gacacaacattgctatgcatgaccttttgaact 16017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 33466955 - 33467007
Alignment:
Q  23 tatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttg 75  Q
    |||||||||| ||||| ||||| || ||||||||||||||| |||| ||||||    
T  33466955 tatatatcaatgattaattacatatcaatagaaggcaagcgaacaataagttg 33467007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 210
Target Start/End: Original strand, 33111 - 33286
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| |||||||||||||||| | ||| ||| ||  |||  || |||||||||||||||||| |||||||||||||||| || ||||||||||    
T  33111 attatttacacttgaatagaaggcaagcaggcaacaagctgcaccgccaagcctttttggatgacaaaatcaatcctcgtaaacacgacgttcatggacc 33210  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaacc 210  Q
    |||||||||| | ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||    
T  33211 taggagacataaaattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgttaggaaacc 33286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 6279 - 6378
Alignment:
Q  119 acaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  6279 acaacattcatggacctaggagacatgacattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtgctaggaaactgaaagtgt 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 430 - 247
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacc 134  Q
    |||| |||||| ||||||||||| |||| | ||| ||| || |||   || |||||||||||| |||||| |||||||||||||||||| ||||| || |    
T  430 attatttacacttgaatagaaggaaagccggcaacaagatgcgccacaaagcctttttggatggcaaaactaatcctcgtaaacacaacgttcatcgatc 331  T
Q  135 taggagacatgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||||||||||||| | |||||  |||||||| |||| |||||||||||| ||| |||| |||| |||||||||||||    
T  330 taggagacatgacattgctatgtatgactttttgaactttatgcagaaggtcaacaacctttggtactagaaaaccaaaagtgt 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 7503 - 7646
Alignment:
Q  74 tgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactg 173  Q
    |||||||||| | |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||  || |||||||| |||||||      
T  7503 tgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattcatggacctatgagacatgacatt-atatgcatgaccttttgaacgc 7601  T
Q  174 tatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| | ||||||||||  |||||| ||||||||||  |||||||    
T  7602 tatgcaaaaggtcaacaatctctggagctaggaaactgaaagtgt 7646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 47779 - 47634
Alignment:
Q  22 atatatatcaaagattacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacaca 121  Q
    |||||||||||  ||||||||||| |||||||||| ||| ||||||| ||||||||||| ||||| ||||| ||||  |||| ||||| | ||||||| |    
T  47779 atatatatcaagaattacttacacgtgaatagaagacaaacggacaacaagttgtgccgctaaacatttttcgatggtaaaatcaatctttgtaaacata 47680  T
Q  122 acattcatggacctaggagacatgacattgctacgcatgacccttt 167  Q
    |||||||||| |||| || || |||||||| || ||||| ||||||    
T  47679 acattcatgggcctatgaaacgtgacattgttatgcatgccccttt 47634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 16017 - 16149
Alignment:
Q  85 acctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacattgctacgcatgaccctttgaactgtatgtagaagg 184  Q
    |||||||||||| | |||| |||| ||| |||||| || |||||| |||  |||| |||||| ||| ||| ||||||||||||||||| ||||||||| |    
T  16017 acctttttggattataaaatcaattctcataaacaaaaaattcatagacacaggaaacatgatattactatgcatgaccctttgaactctatgtagaaag 16116  T
Q  185 tcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||| | ||| |||||||||||||||||||||||    
T  16117 tcaataacct-tggtgctaggaaaccaaaagtgt 16149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 178
Target Start/End: Original strand, 49287 - 49419
Alignment:
Q  46 atgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatg 145  Q
    |||| ||||||||||||   ||| |||||| |||| || ||| |||| ||||  |||| |||| |||||||| || |||||||||||| || ||||||||    
T  49287 atgattagaaggcaagctagcaacaagttgcgccgctagaccgttttagatggaaaaatcaattctcgtaaatactacattcatggacataagagacatg 49386  T
Q  146 acattgctacgcatgaccctttgaactgtatgt 178  Q
    |||||| || |||||| |||||||||| |||||    
T  49387 acattgttatgcatgatcctttgaactctatgt 49419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 6754 - 6837
Alignment:
Q  40 ttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaac 123  Q
    |||||| |||||||||||||||||| ||| ||| || | || || ||||||||||||| |||||||||| ||||||||||||||    
T  6754 ttacacttgaatagaaggcaagcgggcaacaagctgcggcgctagacctttttggatggcaaaaccaattctcgtaaacacaac 6837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 5185 - 5276
Alignment:
Q  35 attacttacacatgaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacatt 126  Q
    |||| |||||| ||||||||| |||||||| ||| ||| || |||| || ||||||||||||| ||||  |||||||||| |||||||||||    
T  5185 attatttacacttgaatagaatgcaagcgggcaacaagctgcgccgctagacctttttggatggcaaagtcaatcctcgtgaacacaacatt 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 4434 - 4378
Alignment:
Q  94 gatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagacatgacatt 150  Q
    |||||||||||||||  |||||||||||||||| |||||| || |||||||||||||    
T  4434 gatgacaaaaccaatattcgtaaacacaacatttatggacttatgagacatgacatt 4378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 10329 - 10404
Alignment:
Q  142 catgacattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    |||||||||| || ||||| |||||| |||| ||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  10329 catgacattgttatgcatggccctttcaactctat-tagaaggtcaacaacctctggtgctaggaagccacaagtgt 10404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 17510 - 17415
Alignment:
Q  48 gaatagaaggcaagcggacaaaaagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacctaggagaca 143  Q
    |||| ||| ||||||||  || || |||||||| |||  || |||||||  ||||| ||||| || ||||||||||||||||||||||| ||||||    
T  17510 gaatggaaagcaagcgggaaataacttgtgccgctaactctatttggatagcaaaagcaatcatcttaaacacaacattcatggacctaagagaca 17415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 52727 - 52663
Alignment:
Q  70 aagttgtgccgttaaacctttttggatgacaaaaccaatcctcgtaaacacaacattcatggacct 135  Q
    |||||| | |||||||| ||||||||| ||||||| |||| || ||||||||| ||||||||||||    
T  52727 aagttgcgtcgttaaac-tttttggataacaaaactaatcttcataaacacaatattcatggacct 52663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 18499 - 18427
Alignment:
Q  146 acattgctacgcatgaccctttgaactgtatgtagaaggtcaacagcctctggtgctaggaaaccaaaagtgt 218  Q
    ||||||||  |||||||||||| |||| |||||||||||| ||||  ||||  |||| ||||| |||||||||    
T  18499 acattgctctgcatgaccctttaaactctatgtagaaggttaacaatctctactgcttggaaatcaaaagtgt 18427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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