View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4731_low_26 (Length: 251)
Name: NF4731_low_26
Description: NF4731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4731_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 45360081 - 45359841
Alignment:
| Q |
1 |
aatgtttctgctgaagaaagaacatgatggtcactttgttggatatcataggtggttacatagctgttctgagttgttggtgtgggtaagtttcttgatt |
100 |
Q |
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| T |
45360081 |
aatgtttctgctgaagaaagaacatgatggtcactttgttggatatcataggtggttacatagctgttctgagttgttggtgtgggtaagtttcttgatt |
45359982 |
T |
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| Q |
101 |
tttagttgtcagcttctcaagagtttaatgcatttgatttcttgtgatttaaatctccacttatgcctatatgtaggcaaatatcattctcttcacaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45359981 |
tttagttgtcagcttctcaagagtttaatgcatttgatttcttgtgatttaaatctccacttatgcctatatgtaggcaaatatcattctcttcacaaag |
45359882 |
T |
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| Q |
201 |
tgtgcaagcattcattgcatagtcttcaaccgtgtcctatg |
241 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
45359881 |
tgtgcaagcattcattgcatagtcttcaaccgtgtcttatg |
45359841 |
T |
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