View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4731_low_33 (Length: 239)
Name: NF4731_low_33
Description: NF4731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4731_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 45360395 - 45360615
Alignment:
| Q |
1 |
atgccttctcaaaacccttttaagatcacaagatcagctactagtacctgagcgtctgatctctgagttcctcgaccactaatcttttgcttaattccaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45360395 |
atgccttctcaaaacccttttaagatcacaagatcagctactagtacctgagcgtctgatctctgagttcctcgaccactaatcttttgcttaattccaa |
45360494 |
T |
|
| Q |
101 |
gtacaagaatcatagcaatagtcactacattcactgcaaaacctaaaacagtatgcacgattaaggaaaatcaattcatataacgggacaaaattgtgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45360495 |
gtacaagaatcatagcaatagtcactacattcactgcaaaacctaaaacagtatgcacgattaaggaaaatcaattcatataacgggacaaaattgtgat |
45360594 |
T |
|
| Q |
201 |
gcagaaacttaaagcaagaat |
221 |
Q |
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||||||||||||| ||||||| |
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| T |
45360595 |
gcagaaacttaaaacaagaat |
45360615 |
T |
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