View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4732_high_23 (Length: 242)
Name: NF4732_high_23
Description: NF4732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4732_high_23 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 1387049 - 1387291
Alignment:
| Q |
1 |
attatactgcaaagaaacgttagacaataaaatctttcttatgaaagtaaccaatcaaaaagtaattaataattacaacacacaattattatttgagtat |
100 |
Q |
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| T |
1387049 |
attatactgcaaagaaacgttagacaataaaatctttcttatgaaagtaaccaatcaaaaagtaattaataattacaacacacaattattatttgagtat |
1387148 |
T |
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| Q |
101 |
ctttagattatgtatcaatgttgaaatcattttattttt-gaattgctactcttcaaaatcttggtttccattgattataacaattagagtatcttttaa |
199 |
Q |
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| T |
1387149 |
ctttagattatgtatcaatgttgaaatcattttatttttggaattgctactcttcaaaatcttggtttccattgattataacaattagagtatcttttaa |
1387248 |
T |
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| Q |
200 |
ccgtgtatcttcatcaaattctaaaaatttaagaaactgtttt |
242 |
Q |
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| T |
1387249 |
ccgtgtatcttcatcaaattctaaaaatttaagaaactgtttt |
1387291 |
T |
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