View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4733-Insertion-5 (Length: 500)
Name: NF4733-Insertion-5
Description: NF4733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4733-Insertion-5 |
 | |
|
| [»] chr3 (41 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 433; Significance: 0; HSPs: 41)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 8 - 500
Target Start/End: Original strand, 8860799 - 8861290
Alignment:
| Q |
8 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
8860799 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgacttgaaagatgctctctttgat |
8860898 |
T |
|
| Q |
108 |
gctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttccttt |
207 |
Q |
| |
|
|||||||| |||||| | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8860899 |
gctgaggatttgctcaaccaaatcagttatgattcattacgatgcaaggtggaggatacacaagctgcaaacaaaactaatcaggtgtggaacttccttt |
8860998 |
T |
|
| Q |
208 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
8860999 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaaattttcgcacaacataaagatatccttggttt |
8861098 |
T |
|
| Q |
308 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8861099 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacagtaatg |
8861198 |
T |
|
| Q |
408 |
aacatgttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcgctaaaacgacacttgc |
500 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
8861199 |
aacatgttgctatcagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtat-gggaggtgtcggtaaaacgacacttgc |
8861290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 8 - 500
Target Start/End: Original strand, 10888819 - 10889310
Alignment:
| Q |
8 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
10888819 |
gctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccgtgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgat |
10888918 |
T |
|
| Q |
108 |
gctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttccttt |
207 |
Q |
| |
|
|| ||||| ||||| | || || |||||||| ||||| ||||||||||||||||||||| || | |||||||||||| ||||||||||| |||||||| |
|
|
| T |
10888919 |
gcggaggatttgctgaaccaaattagttatgaatcattgcgatgcaaggtggagaatacacaatccacaaacaaaactagtcaggtgtggagcttccttt |
10889018 |
T |
|
| Q |
208 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
10889019 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtaatagcttgcaactttttgcacaacataaagatatccttggttt |
10889118 |
T |
|
| Q |
308 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10889119 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
10889218 |
T |
|
| Q |
408 |
aacatgttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcgctaaaacgacacttgc |
500 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
10889219 |
aacatgttgctatcagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtat-gggaggtgtcggtaaaacgacacttgc |
10889310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 8 - 500
Target Start/End: Complemental strand, 11160573 - 11160082
Alignment:
| Q |
8 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgat |
107 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
11160573 |
gctggttctacaagctgtgctggatgatgcagaggagaagtagatcaacaaccgtgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgat |
11160474 |
T |
|
| Q |
108 |
gctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttccttt |
207 |
Q |
| |
|
|| ||||| ||||| |||| || |||||||| ||| | ||||||||||||||||||||| || | |||||||||||| ||||||||||| |||||||| |
|
|
| T |
11160473 |
gccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggagaatacacaatccacaaacaaaactagtcaggtgtggagcttccttt |
11160374 |
T |
|
| Q |
208 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggttt |
307 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11160373 |
cttctccttttaacaccttctatagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacataaagatatccttggttt |
11160274 |
T |
|
| Q |
308 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
407 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11160273 |
gcaaagtaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgcatctgtcatggttggtagaaatgatgataaagagacaataatg |
11160174 |
T |
|
| Q |
408 |
aacatgttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcgctaaaacgacacttgc |
500 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
11160173 |
aacatgttgctatcagagagtagcactggcaataacaatataggcgttgttgcaattttaggtat-gggaggtgtcggtaaaacgacacttgc |
11160082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 484
Target Start/End: Complemental strand, 11149410 - 11148935
Alignment:
| Q |
8 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11149410 |
gctggttcttcaagctgtgctggatgatgctgatgagaagcagatcaacaatcctgctgtcaaacaatggcttgatgacttgaaagatgctatctttgat |
11149311 |
T |
|
| Q |
108 |
gctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttccttt |
207 |
Q |
| |
|
|| ||||| ||||| |||| || |||||||| ||| | ||||||||||||||||||||| || | |||||||||||| ||||||||||| |||||||| |
|
|
| T |
11149310 |
gccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggagaatacacaatccacaaacaaaactagtcaggtgtggagcttccttt |
11149211 |
T |
|
| Q |
208 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggttt |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | | ||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
11149210 |
cttctccttttaacaccatctacagagagatcaattcccaaatgaagaccatgtgtgacaacctgcaaatttttgcacaaaacaaagatatccttggttt |
11149111 |
T |
|
| Q |
308 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
407 |
Q |
| |
|
||||||||||| || || | ||| | |||||| ||||| ||||| || ||||||||||| |||||||||||||||| ||||| ||||||| ||||| | |
|
|
| T |
11149110 |
gcaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaatgaatcattcatggttggtagaaaggatgacaaagagataataacg |
11149011 |
T |
|
| Q |
408 |
aacatgttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcg |
484 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11149010 |
aacatgttgctatcaaagagcagcactagcaataacaatatcggtgttgttgcaattttaggtat-gggaggtgtcg |
11148935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 484
Target Start/End: Complemental strand, 11131582 - 11131107
Alignment:
| Q |
8 |
gctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgat |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
11131582 |
gctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccgtgctgtcaaaaaatgggttgatgacttgaaagatgctatctttgat |
11131483 |
T |
|
| Q |
108 |
gctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttccttt |
207 |
Q |
| |
|
|| ||||| ||||| |||| || |||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11131482 |
gcggaggatttgctgaatcaaattagttatgagtcactgcgatgcaaggtggagaatacacaagctgcaaacaaaactaatcaggtctggaacttccttt |
11131383 |
T |
|
| Q |
208 |
cttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggttt |
307 |
Q |
| |
|
||||||||||||| | | |||| ||||||||||||||||||| |||| ||||||||| | | ||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
11131382 |
cttctccttttaaaaacatctatggagagatcaattcccaaattaagaccatgtgtgacaacctgcaaatttttgcacaaaacaaagatatccttggttt |
11131283 |
T |
|
| Q |
308 |
gcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatg |
407 |
Q |
| |
|
|||||||||| || || | ||| | |||||| ||||| ||||| || ||||||||||| |||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
11131282 |
acaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaatgaatcattcatggttggtagaaaggatgacaaagagacaataacg |
11131183 |
T |
|
| Q |
408 |
aacatgttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcg |
484 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11131182 |
aacatgttgctatcaaagagcagcactagcaataacaatatcggtgttgttgcaattttaggtat-gggaggtgtcg |
11131107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 14 - 475
Target Start/End: Complemental strand, 10376395 - 10375934
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10376395 |
tcttcaagttgtgctggatgatgcagaggagaagcagatcatcaatccttctgtcaagcaatggcttgatgacttgaaagatgctatctttgatgctgag |
10376296 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| || | |||||||||||||| | |||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10376295 |
gacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgttgaacttcctttcttctc |
10376196 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| | || ||||| | |||||||| |||||| ||||||| |
|
|
| T |
10376195 |
cttttaacaccttctacagagagatcaattctcaaatgaaggtcatgtgtgatagcctgcaattctttgcacagtataaagatatacttggtctgcaaac |
10376096 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| || |||||||||||| |
|
|
| T |
10376095 |
taaaagtggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgataaagacactataatgaacatg |
10375996 |
T |
|
| Q |
414 |
ttgctatcagagagcag-cactgggaataacaatatcggtgttgttgcaattttaggtatggg |
475 |
Q |
| |
|
||||||||||||| ||| ||| | |||| ||||| ||||||||||||||||| || ||||| |
|
|
| T |
10375995 |
ttgctatcagaga-cagacacatcgcataataatataggtgttgttgcaattttgggcatggg |
10375934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 475
Target Start/End: Original strand, 10580120 - 10580581
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
10580120 |
tcttcaagttgtgctggatgatgcagaggagaagcagatcaataatcctgctgtcaaactatggcttgatgacttgaaagatgctatcattgatgctgag |
10580219 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| || | |||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580220 |
gacttgctcaatgaaatcagttacgattccctgcgatgcaaggtggagaatacacaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctc |
10580319 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||| ||||||||||||||||| | | ||||| | || ||| | || |||||| |||||||||||||||| |
|
|
| T |
10580320 |
cttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaac |
10580419 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||| | || || |||||||| | |||| ||||||||||| || |||| |||||||||||||| ||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
10580420 |
taagagtgctagagtttctcatggaactccttcaagttctgtgtttaacgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatg |
10580519 |
T |
|
| Q |
414 |
ttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggg |
475 |
Q |
| |
|
||||||||| |||| | ||| |||| ||||| ||||||||||||||||| || ||||| |
|
|
| T |
10580520 |
ttgctatcacagagaaacacaatccataataatataggtgttgttgcaattttgggcatggg |
10580581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 475
Target Start/End: Complemental strand, 10434594 - 10434133
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||| ||| |
|
|
| T |
10434594 |
tcttcaagttgtgctggatgatgcagaggagaagcagatcaacaaacctgctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgccgag |
10434495 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| | | |||||||||||||| | |||| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
10434494 |
gacttgctcaacgaaatcagttatgattcccttcgatccaaggtggagaatacacatgctcaaaacaaaactaatcaggtgttgaacttcctttcatctc |
10434395 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| | |||||||| |||||| ||||||| |
|
|
| T |
10434394 |
cttttaatagtttctacagagagatcaattctcaaatgaagatcatgtgtgaaagcttgcaactttttgcacagaataaagatatacttggtctgcaaac |
10434295 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
|||| ||| | |||||||| ||||| ||||||||||| || || ||||||||| |||||||||| || || ||||| ||||||||||||||||||||| |
|
|
| T |
10434294 |
caaaagtgggagagtttctcatagaaatccttcaagttctgtggtcaatgaatctttcatggttggaaggaaggatgacaaagagacaataatgaacatg |
10434195 |
T |
|
| Q |
414 |
ttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggg |
475 |
Q |
| |
|
||||||||| |||| | ||| |||| || || |||||||||||||||||||| ||||| |
|
|
| T |
10434194 |
ttgctatcacagagaaacacaactcataataagataggtgttgttgcaattttaggcatggg |
10434133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 427
Target Start/End: Original strand, 10088309 - 10088722
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
10088309 |
tcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgacttgaaagatgctgtctttgatgctgag |
10088408 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| | |||||||||||||| | |||||||||||||||||| || ||||| |||||||| | |||||||| |||||||||||| |||| |
|
|
| T |
10088409 |
gacttgctcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaacaaaagttatcaggtgatgaacttcctttcatctc |
10088508 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | || ||||| | |||||||| |||||| ||||||| |
|
|
| T |
10088509 |
cttttaatagcttctacagagagatcaattctcaaatgaagatcatgtgtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaac |
10088608 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
|||||| | | ||||| | |||||| ||||||||||| || || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| |
|
|
| T |
10088609 |
taaaatcgcaagggtttcacatagaactccttcaagttcggtggtaaatgaatctgtcatggtgggtaggaaggatgataaagagacaataatgaacatg |
10088708 |
T |
|
| Q |
414 |
ttgctatcagagag |
427 |
Q |
| |
|
||||| ||| |||| |
|
|
| T |
10088709 |
ttgctttcaaagag |
10088722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 427
Target Start/End: Original strand, 10195192 - 10195605
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
10195192 |
tcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgacttgaaagatgctgtctttgatgctgag |
10195291 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|||||| || | |||||||||||||| | |||||||||||||||||| || ||||| |||||||| | |||||||| |||||||||||| |||| |
|
|
| T |
10195292 |
gacttgttcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaacaaaagttatcaggtgatgaacttcctttcatctc |
10195391 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | || ||||| | |||||||| |||||| ||||||| |
|
|
| T |
10195392 |
cttttaatagcttctacagagagatcaattctcaaatgaagatcatgtgtgaaagcttgcaattgtttgcacagaataaagatatacttggtctgcaaac |
10195491 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| | | ||||| | |||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10195492 |
taaaaacgcaagggtttcacatagaactccttcaagttcagtggtaaatgaatctgtcatggtgggtagaaaggatgataaagagacaataatgaacatg |
10195591 |
T |
|
| Q |
414 |
ttgctatcagagag |
427 |
Q |
| |
|
||||| ||| |||| |
|
|
| T |
10195592 |
ttgctttcaaagag |
10195605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 427
Target Start/End: Original strand, 11768754 - 11769166
Alignment:
| Q |
15 |
cttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgagg |
114 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
11768754 |
cttcaggctgtactggatgatgcggaggagaagcagatgaacaatcttgctgtcaaacaatggcttgatgacttgaaagacgctatctttgatgctgagg |
11768853 |
T |
|
| Q |
115 |
acttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctcc |
214 |
Q |
| |
|
| || |||||||| || |||||||| || | ||||||||| ||||||| | | ||||| ||||||||||||||||||||||||||| ||||| || || |
|
|
| T |
11768854 |
atttactcgatcaaataagttatgactccctccgatgcaagatggagaagaaacaagctagaaacaaaactaatcaggtgtggaacttactttcatcccc |
11768953 |
T |
|
| Q |
215 |
ttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaact |
314 |
Q |
| |
|
|||||| | | |||| |||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| | |||||||| | |||||||||||| |
|
|
| T |
11768954 |
ttttaaaaacatctatggagagatcaattcccatatgaagatcatgtgtgaaagcctgcaactttttgcacaaaataaagatatattaggtttgcaaact |
11769053 |
T |
|
| Q |
315 |
aaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgt |
414 |
Q |
| |
|
|||| || || ||||||||||||||| |||||||||||||| || |||||||||||||| || ||||| || |||| |||||||||||||||||||||| |
|
|
| T |
11769054 |
aaaagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatagtgggtaggaagaatgacaaagagacaataatgaacatgt |
11769153 |
T |
|
| Q |
415 |
tgctatcagagag |
427 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
11769154 |
tgctatcacagag |
11769166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 421
Target Start/End: Original strand, 9838380 - 9838787
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||||||| ||||| ||||||||| ||||||||| | |||||||||| | |||||||||||||| |
|
|
| T |
9838380 |
tcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgag |
9838479 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| |||||| | | |||||||| ||||| | |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838480 |
gatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctc |
9838579 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | || |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||||||| |
|
|
| T |
9838580 |
cttttaatagtttttacaaagagatcaattcccagatgaagatcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaac |
9838679 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| || || ||||||||||||||| ||||| ||||||| || |||||||||||| |||| ||||| || | ||| ||||||||||||||||||||| |
|
|
| T |
9838680 |
taaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatg |
9838779 |
T |
|
| Q |
414 |
ttgctatc |
421 |
Q |
| |
|
|||||||| |
|
|
| T |
9838780 |
ttgctatc |
9838787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 421
Target Start/End: Original strand, 9849258 - 9849665
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||||||| ||||| ||||||||| ||||||||| | |||||||||| | |||||||||||||| |
|
|
| T |
9849258 |
tcttcaggctgttctagatgatgcagaggagaagcagatcagcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgag |
9849357 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| |||||| | | |||||||| ||||| | |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849358 |
gatttgctcaacgaaatcagttacgattccctgcgatgcaaggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctc |
9849457 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | || |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||||||| |
|
|
| T |
9849458 |
cttttaatagtttttacaaagagatcaattcccagatgaagatcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaac |
9849557 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| || || ||||||||||||||| ||||| ||||||| || |||||||||||| |||| ||||| || | ||| ||||||||||||||||||||| |
|
|
| T |
9849558 |
taaaagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatg |
9849657 |
T |
|
| Q |
414 |
ttgctatc |
421 |
Q |
| |
|
|||||||| |
|
|
| T |
9849658 |
ttgctatc |
9849665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 14 - 423
Target Start/End: Original strand, 10076785 - 10077197
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| | |||||||||||| |||||||||| ||| |
|
|
| T |
10076785 |
tcttcaggctgtactagatgatgcagaggagaagcagatcagcaatccccatgtcagacagtggcttgataacttgaaagatgctgtctttgatgccgag |
10076884 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| | | |||||||| |||||| | |||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
10076885 |
gacttgctcaacgaaatcagttacgattcactgcgatgcaaggtggagaatgcacaagctcaaaacaaaactaatcaggtgttgaacttcctttcatctc |
10076984 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | |||||||| |||||||||||| |||| ||||||||||||||| || |||||| | || ||||| | |||||| | |||||| ||||||| |
|
|
| T |
10076985 |
cttttaatagcttctacaaagagatcaattctcaaacgaagatcatgtgtgaaaggttgcaattgtttgcacagaataaagatgtacttggtctgcaaac |
10077084 |
T |
|
| Q |
314 |
taaaattggtaaag---tttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaac |
410 |
Q |
| |
|
|||||||| || || ||||||||||||| |||||||||||||| || |||||||||| |||||||||| | ||| |||||||||||||||||| |
|
|
| T |
10077085 |
taaaattgctagagtaatttctcgtagaacaccttcaagttcagtggtaaatgaatctgagatggttggtatggagcgtgacaaagagacaataatgaac |
10077184 |
T |
|
| Q |
411 |
atgttgctatcag |
423 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10077185 |
atgttgctatcag |
10077197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 14 - 427
Target Start/End: Complemental strand, 10364348 - 10363935
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| ||| |
|
|
| T |
10364348 |
tcttcaagttgtgctggatgacgcagaagagaagcagatcaacaatcctgctgtcaaacaatggcttgatggcttgaaagatgctgtctttgatgccgag |
10364249 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| ||||| | | |||||||||||||| | ||||||| |||||| || | |||||| ||||| || ||||||||||||||||||||||| |||| |
|
|
| T |
10364248 |
gatttgcttcacgaaatcagttatgattccctgcgatgcacaatggagagtaaacaagctggaaacagaagtaatcaggtgtggaacttccttttatctc |
10364149 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
|||| || | |||||| ||||||||||||||||| ||||||||||||||||| ||| |||||| ||| | | | |||||||| ||| |||||||||| |
|
|
| T |
10364148 |
ctttcaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaagcctgcaacattttgaaaagagaaaagatatacttcgtttgcaaac |
10364049 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| | ||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
10364048 |
taaaagcacaagggtttcacgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatg |
10363949 |
T |
|
| Q |
414 |
ttgctatcagagag |
427 |
Q |
| |
|
||||| ||| |||| |
|
|
| T |
10363948 |
ttgctttcaaagag |
10363935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 399
Target Start/End: Original strand, 13332423 - 13332808
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||| |
|
|
| T |
13332423 |
tcttcaggcggtgctggatgatgcagaacagaagcaaatcaccaacactgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgag |
13332522 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| ||||| | || |||| ||| || || | ||||| ||||||||||| | | |||||| ||||| ||||||||||| |||||| || |||| |||| |
|
|
| T |
13332523 |
gatttgcttaaccaaatcaattacgactccctgcgatgtaaggtggagaagaaacaagctgaaaacatgactaatcaggtttggaacctcttttcgtctc |
13332622 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | |||| ||||||||||||| ||||||||||| |||||| | || |||||||||| |||||||| | |||||| ||||| |||||||| |
|
|
| T |
13332623 |
cttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgtcaaaggctgcaactttttgcacaacagagagatattcttggcttgcaaac |
13332722 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
| | | | |||||||| |||||| |||||||||||| | || ||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
13332723 |
tgtgagcgcgagagtttctcttagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagaga |
13332808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 399
Target Start/End: Original strand, 13289194 - 13289569
Alignment:
| Q |
24 |
gtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcg |
123 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||||| ||||| |
|
|
| T |
13289194 |
gtgctggatgatgcagaactgaagcaaatcaccaacactgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgctta |
13289293 |
T |
|
| Q |
124 |
atcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacac |
223 |
Q |
| |
|
| || |||| ||| || || | ||||| ||||||||||| | | |||||| ||||| ||||||||||| |||||| || |||| ||||||||||| || |
|
|
| T |
13289294 |
accaaatcaattacgactccctgcgatgtaaggtggagaagaaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaac |
13289393 |
T |
|
| Q |
224 |
cttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattggt |
323 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||| | || |||| ||||| |||||||| | |||||||||||| ||||||||| | || |
|
|
| T |
13289394 |
tctctatggagagatcaattcacaaatgaagattatgtgtcaaaggctgcagctttttgcacaacagagagatatccttggcttgcaaactgtgagaggg |
13289493 |
T |
|
| Q |
324 |
aaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
| |||||||| |||||| |||||||||||| | || ||| ||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
13289494 |
agagtttctcttagaacgccttcaagttcaatggtaaataaatctgttatggttggtaggaaggatgataaagaga |
13289569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 24 - 399
Target Start/End: Original strand, 13160509 - 13160884
Alignment:
| Q |
24 |
gtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcg |
123 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||||| ||||| |
|
|
| T |
13160509 |
gtgctggatgatgcagaactgaagcaaatcaccaacactgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgctta |
13160608 |
T |
|
| Q |
124 |
atcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacac |
223 |
Q |
| |
|
| || |||| ||| || || | ||||| | ||||||||| | | |||||| ||||| ||||||||||| |||||| || |||| ||||||||||| | |
|
|
| T |
13160609 |
accaaatcaattacgactccctgcgatgtacggtggagaagaaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaaa |
13160708 |
T |
|
| Q |
224 |
cttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattggt |
323 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||| | || |||||||||| |||||||| | |||||||||||| ||||||||| | | |
|
|
| T |
13160709 |
tctctatggagagatcaattcacaaatgaagattatgtgtcaaaggctgcaactttttgcacaacaaagagatatccttggcttgcaaactgtgagcgcg |
13160808 |
T |
|
| Q |
324 |
aaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
| |||||||| ||||| |||||||||||| | || ||||||||||| ||||||||||| || |||||||| |||| |
|
|
| T |
13160809 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaggaga |
13160884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 30 - 399
Target Start/End: Original strand, 13170566 - 13170935
Alignment:
| Q |
30 |
gatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcgatcaga |
129 |
Q |
| |
|
||||||||||| ||||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||||| ||||| | || | |
|
|
| T |
13170566 |
gatgatgcagaacagaagcaaatcaccaacactgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaa |
13170665 |
T |
|
| Q |
130 |
tcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacaccttcta |
229 |
Q |
| |
|
||| ||| || || | ||||| ||||||||||| | | || ||| ||||| ||||||||||| |||||| || |||| | ||||||||| | |||| |
|
|
| T |
13170666 |
tcaattacgactccctccgatgtaaggtggagaagatacaatctgaaaacatgactaatcaggtttggaacctcttttcatgtccttttaaaaatctcta |
13170765 |
T |
|
| Q |
230 |
cagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattggtaaagtt |
329 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| | || |||||||||| |||||||| | |||||||||||| ||||||||| | || | |||| |
|
|
| T |
13170766 |
tggagagatcaattcacaaatgaagattatgtgtcaaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtt |
13170865 |
T |
|
| Q |
330 |
tctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
|||| ||||| |||||||||||| | || ||||||||||| |||||||| || || ||||||||||||| |
|
|
| T |
13170866 |
tctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggaaggaaggatgataaagaga |
13170935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 399
Target Start/End: Original strand, 13343608 - 13343993
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| || ||||||||||||||||| | ||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||| |
|
|
| T |
13343608 |
tcttcaggcggtgctggatgatgcagaacataagcaaatcaccaacactgctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgag |
13343707 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| ||||| | || |||| || || || | ||||| | ||||||||| | | |||||| ||||| ||||||||||| |||||| || |||| |||| |
|
|
| T |
13343708 |
gatttgcttaaccaaatcaactacgactccctgcgatgtacggtggagaagaaacaagctgaaaacatgactaatcaggtttggaacctcttttcgtctc |
13343807 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
| ||||| | |||| ||||||||||||| ||||||||||| |||||| | || |||| |||| |||||||| | |||||||||||| |||||||| |
|
|
| T |
13343808 |
cgtttaaaaatctctatggagagatcaattcacaaatgaagattatgtgtcaaaggctgcagatttttgcacaacagagagatatccttggcttgcaaac |
13343907 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
| | || | |||||||| ||||| |||||||||||| | || ||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
13343908 |
tgtgagcgggagagtttctctaagaacaccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagaga |
13343993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 10260523 - 10260630
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
419 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10260523 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
10260622 |
T |
|
| Q |
420 |
tcagagag |
427 |
Q |
| |
|
||| |||| |
|
|
| T |
10260623 |
tcacagag |
10260630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 10126753 - 10126854
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
419 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10126753 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
10126852 |
T |
|
| Q |
420 |
tc |
421 |
Q |
| |
|
|| |
|
|
| T |
10126853 |
tc |
10126854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 10031828 - 10031935
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
419 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||| ||||||| ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10031828 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
10031927 |
T |
|
| Q |
420 |
tcagagag |
427 |
Q |
| |
|
||| |||| |
|
|
| T |
10031928 |
tcacagag |
10031935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 10184067 - 10184174
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
419 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||| |
|
|
| T |
10184067 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctg |
10184166 |
T |
|
| Q |
420 |
tcagagag |
427 |
Q |
| |
|
||| |||| |
|
|
| T |
10184167 |
tcacagag |
10184174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10517007 - 10517114
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| ||| |||| ||| | |||||||||||||||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
10517007 |
tcttcaagctgtgctggttgatgcagagcagaaacagttcaatgatcttcctgtcaaacaatggcttgatgacttgaaagatgcaatctttgattctgaa |
10517106 |
T |
|
| Q |
114 |
gacttgct |
121 |
Q |
| |
|
|| ||||| |
|
|
| T |
10517107 |
gatttgct |
10517114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 11782529 - 11782422
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| ||| |||| ||| | |||||||||||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
11782529 |
tcttcaagctgtgctggttgatgcagagcagaaacagttcaaagatcttcctgtcaaacaatggcttgatgacttgaaagatgcaatatttgatgctgaa |
11782430 |
T |
|
| Q |
114 |
gacttgct |
121 |
Q |
| |
|
|| ||||| |
|
|
| T |
11782429 |
gatttgct |
11782422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 10500378 - 10500455
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaaga |
397 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
10500378 |
tggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaatgatgataaaga |
10500455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 10663351 - 10663458
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
419 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||| ||||||| ||||| || | ||| ||||||||||||||||||||||||||| |
|
|
| T |
10663351 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaagggtgacaaagagacaataatgaacatgttgcta |
10663450 |
T |
|
| Q |
420 |
tcagagag |
427 |
Q |
| |
|
||| |||| |
|
|
| T |
10663451 |
tcacagag |
10663458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 10527168 - 10527237
Alignment:
| Q |
328 |
tttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaaga |
397 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
10527168 |
tttctcgtagaaccccttcaagttcagtggtaaatgaatctgtcattgtgggtaggaatgatgataaaga |
10527237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10526878 - 10526985
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| ||| ||| | | | ||||||||||||||||| |||| ||||||||||| || ||||||||||| |
|
|
| T |
10526878 |
tcttcaagctgtgctggttgatgcagagcagaaacagttcactgaccttcctgtcaaacaatggcttcatgacttgaaagatgcaatatttgatgctgaa |
10526977 |
T |
|
| Q |
114 |
gacttgct |
121 |
Q |
| |
|
|| ||||| |
|
|
| T |
10526978 |
gatttgct |
10526985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10541493 - 10541600
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
||||||| ||||||||| |||||||||| |||| ||| ||| | | | ||||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10541493 |
tcttcaatctgtgctggttgatgcagagcagaaacagttcattgaccttcctgtcaagcaatggcttgatgacttgaaagatgcaatctttgatgctgaa |
10541592 |
T |
|
| Q |
114 |
gacttgct |
121 |
Q |
| |
|
|| ||||| |
|
|
| T |
10541593 |
gatttgct |
10541600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 10085627 - 10085735
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || ||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | |||||||||| | ||||||||||||| |
|
|
| T |
10085627 |
tcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagatgttttctttgatgctgaa |
10085726 |
T |
|
| Q |
114 |
gacttgctc |
122 |
Q |
| |
|
|| |||||| |
|
|
| T |
10085727 |
gatttgctc |
10085735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 10192547 - 10192655
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || ||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | |||||||||| | ||||||||||||| |
|
|
| T |
10192547 |
tcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagatgttttctttgatgctgaa |
10192646 |
T |
|
| Q |
114 |
gacttgctc |
122 |
Q |
| |
|
|| |||||| |
|
|
| T |
10192647 |
gatttgctc |
10192655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 10500096 - 10500206
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||||||| || | |||||||||| |||| || ||| ||| | |||||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
10500096 |
tcttcaagctgttctagttgatgcagagcagaaacaattcactgatcttcctgtcaaacaatggcttgatgacttgaaagacacaatctttgatgctgaa |
10500195 |
T |
|
| Q |
114 |
gacttgctcga |
124 |
Q |
| |
|
|| |||||||| |
|
|
| T |
10500196 |
gatttgctcga |
10500206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3884692 - 3884763
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatga |
85 |
Q |
| |
|
||||||||||||| || ||||||| ||||||||||| |||| ||| | |||||||||| ||||||| ||||| |
|
|
| T |
3884692 |
tcttcaagctgtgttgaatgatgctgaggagaagcaaatcaccaaccctgctgtcaaagaatggctggatga |
3884763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 4080970 - 4080909
Alignment:
| Q |
18 |
caagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggct |
79 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||||||| ||| | ||||||||| |||||||| |
|
|
| T |
4080970 |
caagctgtactgaatgatgctgaggagaagcagatcaccaaccctgctgtcaagcaatggct |
4080909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 11782244 - 11782173
Alignment:
| Q |
326 |
agtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaaga |
397 |
Q |
| |
|
||||||| ||||||||||||||||||||| | ||| |||||| | |||| ||||| |||||||||||||| |
|
|
| T |
11782244 |
agtttcttctagaaccccttcaagttcagtgctaaatcaatctgacgtggtgggtaggaatgatgataaaga |
11782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 3914285 - 3914187
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctga |
112 |
Q |
| |
|
||||||||||||| || ||||||| |||||||| || |||| ||| | |||||| ||||||||| | ||||| | | ||||||| ||| ||||||||| |
|
|
| T |
3914285 |
tcttcaagctgtgatgaatgatgctgaggagaaacaaatcaccaaccctgctgttaaacaatggttggatgaactaagagatgctctctatgatgctga |
3914187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 4129233 - 4129298
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggct |
79 |
Q |
| |
|
|||||||||||| || ||||||| |||||||| ||||||| ||| | ||||||||| |||||||| |
|
|
| T |
4129233 |
tcttcaagctgtacttcatgatgctgaggagaaacagatcaccaaccctgctgtcaagcaatggct |
4129298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 10126451 - 10126584
Alignment:
| Q |
30 |
gatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcgatcaga |
129 |
Q |
| |
|
|||||||||||||||||||||||| ||| | ||||||||||||| ||| || |||||||| |||| |||||||||||| |||||| |||| | |
|
|
| T |
10126451 |
gatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggctggatcggttaaaagatgcaatctatgatgctgaggatttgctcaatcaaa |
10126550 |
T |
|
| Q |
130 |
tcagttatgattcattacgatgcaaggtggagaa |
163 |
Q |
| |
|
|||| || || | ||||||||||| ||||||| |
|
|
| T |
10126551 |
tcagctacaatgccctacgatgcaagctggagaa |
10126584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 4115841 - 4115785
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaa |
70 |
Q |
| |
|
|||||||||||| ||| ||||||| |||||||| ||||||| |||| ||||||||| |
|
|
| T |
4115841 |
tcttcaagctgtactgaatgatgctgaggagaaacagatcactaatcctgctgtcaa |
4115785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 23 - 427
Target Start/End: Original strand, 26906425 - 26906829
Alignment:
| Q |
23 |
tgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctc |
122 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26906425 |
tgtgctggatgatgcagaggagaaacagatcaacaatcctgctgtcaaacaatggcttgatgacttgaaagatgctatctttgatgttgaggacttgctc |
26906524 |
T |
|
| Q |
123 |
gatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaaca |
222 |
Q |
| |
|
| | || ||||||||||| | |||||||| || ||||||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||| | |
|
|
| T |
26906525 |
aacgaaattagttatgattccctgcgatgcaaagtcgagaatacacaagctcaaaacaaaactaatcaggtgttgaacttcctttcatctccttttaata |
26906624 |
T |
|
| Q |
223 |
ccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattgg |
322 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| ||| ||||| | || |||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
26906625 |
gcttctacagagagatcaattctcaaatgaagataatgtgtgaaagcctgcaattgtttgcacaacataaagatatccttggtttgcaaactaaaagtgc |
26906724 |
T |
|
| Q |
323 |
taaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgctatca |
422 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
26906725 |
tagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaatatgttgctatca |
26906824 |
T |
|
| Q |
423 |
gagag |
427 |
Q |
| |
|
||||| |
|
|
| T |
26906825 |
gagag |
26906829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 145; Significance: 4e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 14 - 494
Target Start/End: Complemental strand, 44958259 - 44957780
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||||| |||| ||| | | |||||||||||||||||||||| |||||| || | || |||||||| ||| |
|
|
| T |
44958259 |
tcttcaggttgtgcttgatgatgcagaggagaagcaaatcaccaaccttactgtcaaacaatggcttgatgacttgaaaaatacaatatttgatgccgag |
44958160 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
|| |||||| | || || || |||||||| | || ||||| |||||||||||| ||| ||| ||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
44958159 |
gatttgctcaaccaaattagctatgattccctgcgttgcaaagtggagaatacacaagttgccaacaaaactaatcaggtctggaacttcctttcatctc |
44958060 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | |||||| ||||||||||||| ||||||||||| |||||||| | |||||||||| ||||| || |||||||| |||||||| |||| |
|
|
| T |
44958059 |
cttttaaaaacttctatggagagatcaattctcaaatgaagattatgtgtgaatccctgcaactttttgcacagcataaagatataattggtttggaaac |
44957960 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatg |
413 |
Q |
| |
|
||||| || || |||||||| |||||| ||||||||||||| |||||||||||| | ||||| || || || |||||||||| | | | || | ||| |
|
|
| T |
44957959 |
taaaagtgctagagtttctcatagaacaccttcaagttcaggggttaatgaatctattatggtgggcaggaaacatgataaagatagactcatagatatg |
44957860 |
T |
|
| Q |
414 |
ttgctatcagagagcagcactgggaataacaatatcggtgttgttgcaattttaggtatggggaggtgtcgctaaaacgac |
494 |
Q |
| |
|
|| ||||||| |||| || | ||||| ||| | ||||||||||| | |||||||| ||||||||||| ||||||||| |
|
|
| T |
44957859 |
ctggtatcagacagcaccagcagaaataataatttaggtgttgttgccaccttaggtat-gggaggtgtcggtaaaacgac |
44957780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 11484589 - 11484685
Alignment:
| Q |
67 |
tcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaa |
163 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| || | ||||| |||||| | || ||||||||||| ||||| |
|
|
| T |
11484589 |
tcaaacaatggcttgatcggttgaaagatgcaatctttgatgctgaggatttgcttaatgaaatcagctatgatgccttgcgatgcaaggtagagaa |
11484685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 11484840 - 11484916
Alignment:
| Q |
321 |
ggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaaga |
397 |
Q |
| |
|
|||| ||||||||||||||| || ||||||||||| || ||||||||||| ||||| || || ||||| |||||||| |
|
|
| T |
11484840 |
ggtagagtttctcgtagaacaccatcaagttcagtggtgaatgaatctgttatggtgggaaggaatgaagataaaga |
11484916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 14 - 391
Target Start/End: Complemental strand, 50355 - 49981
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
50355 |
tcttcaagttgtgctggatgatgctgaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgacttgaaagatgctgtctttgatgctgag |
50256 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctc |
213 |
Q |
| |
|
||||||||| | |||||||||||||| | |||||||||||||||||| || ||||| || ||||| | |||||||| ||||||| |||| ||| |
|
|
| T |
50255 |
gacttgctcagcgaaatcagttatgattccctgcgatgcaaggtggagaatgcaaaagctcaaagcaaaatttatcaggtgatgaacttcttttcatctt |
50156 |
T |
|
| Q |
214 |
cttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaac |
313 |
Q |
| |
|
||||||| | ||| |||||||||||||||| ||||||||||||||||| ||| |||||||||| | | || |||||||| ||| |||||||||| |
|
|
| T |
50155 |
cttttaaaa---actatggagagatcaattcccagatgaagatcatgtgtgaaagcctgcaactttttgaaaaaagaaaagatatacttcgtttgcaaac |
50059 |
T |
|
| Q |
314 |
taaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatga |
391 |
Q |
| |
|
||||| | ||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| |
|
|
| T |
50058 |
taaaagcacaagggtttcacgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatga |
49981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 14 - 424
Target Start/End: Complemental strand, 31680289 - 31679873
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgag |
113 |
Q |
| |
|
|||||| ||||| || |||||||| ||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||| || | |||||||||| |
|
|
| T |
31680289 |
tcttcatgctgttcttgatgatgctgagaagaagcagatcaacaatcttcctgtcaaacaatggcttgatgagttgaaagatgcaatatatgatgctgag |
31680190 |
T |
|
| Q |
114 |
gacttgctcgatcagatcagttatgatt-cattacgatgcaaggtggag------aatacagaagctgcaaacaaaactaatcaggtgtggaacttcctt |
206 |
Q |
| |
|
|| |||||| | |||||||||||||||| | ||| || ||||||||||| |||||| |||||| ||||| ||| |||||| ||||| |||||| |
|
|
| T |
31680189 |
gatttgctcaaccagatcagttatgattgcctta-gaagcaaggtggagaatagtaatacacaagctgaaaacatcactggtcaggtttggaatttcctt |
31680091 |
T |
|
| Q |
207 |
tcttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtt |
306 |
Q |
| |
|
|| ||||||||| | | ||| || |||||||||||||||||||||||| ||| ||| || | |||||||| |||||||| |||||||||||||| | |
|
|
| T |
31680090 |
tcatctccttttcaaaacttgtatggagagatcaattcccaaatgaagagtatgattgaaaggctccaactttttgcacaacaaaaagatatccttgggt |
31679991 |
T |
|
| Q |
307 |
tgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataat |
406 |
Q |
| |
|
|||||||| || ||||| |||| || |||||| |||||||||||| |||| || ||||| ||||||||||||| || ||||||||||| | ||| |
|
|
| T |
31679990 |
tgcaaactgtaagtggtagggtttttcttagaacaccttcaagttcactagtagatcaatctttcatggttggtaggaagagtgataaagagaaactaac |
31679891 |
T |
|
| Q |
407 |
gaacatgttgctatcaga |
424 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
31679890 |
taatatgttgctatcaga |
31679873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 24 - 399
Target Start/End: Complemental strand, 146479 - 146104
Alignment:
| Q |
24 |
gtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcg |
123 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||||| ||||| |
|
|
| T |
146479 |
gtgctggatgatgcagaactgaagcaaatcaccaacactgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgctta |
146380 |
T |
|
| Q |
124 |
atcagatcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacac |
223 |
Q |
| |
|
| || |||| ||| || || | ||||| | ||||||||| | | |||||| ||||| ||||||||||| |||||| || |||| ||||||||||| | |
|
|
| T |
146379 |
accaaatcaattacgactccctgcgatgtacggtggagaagaaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaaa |
146280 |
T |
|
| Q |
224 |
cttctacagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattggt |
323 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||| | || |||||||||| |||||||| | |||||||||||| ||||||||| | || |
|
|
| T |
146279 |
tctctatggagagatcaattcacaaatgaagattatgtgtcaaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcggg |
146180 |
T |
|
| Q |
324 |
aaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
| |||||||| ||||| |||||||||||| | || ||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
146179 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagaga |
146104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 30 - 399
Target Start/End: Complemental strand, 136422 - 136053
Alignment:
| Q |
30 |
gatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttgatgctgaggacttgctcgatcaga |
129 |
Q |
| |
|
||||||||||| ||||||| |||| ||| |||||||||||||||| | ||| | |||||||||| |||| |||||||||||| ||||| | || | |
|
|
| T |
136422 |
gatgatgcagaacagaagcaaatcaccaacactgctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaa |
136323 |
T |
|
| Q |
130 |
tcagttatgattcattacgatgcaaggtggagaatacagaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacaccttcta |
229 |
Q |
| |
|
||| ||| || || | ||||| ||||||||||| | | || ||| ||||| ||||||||||| |||||| || |||| | ||||||||| | |||| |
|
|
| T |
136322 |
tcaattacgactccctccgatgtaaggtggagaagatacaatctgaaaacatgactaatcaggtttggaacctcttttcatgtccttttaaaaatctcta |
136223 |
T |
|
| Q |
230 |
cagagagatcaattcccaaatgaagatcatgtgtgatagcttgcaacttttcgcacaacacaaagatatccttggtttgcaaactaaaattggtaaagtt |
329 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| | || |||||||||| |||||||| | |||||||||||| ||||||||| | || | |||| |
|
|
| T |
136222 |
tggagagatcaattcacaaatgaagattatgtgtcaaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtt |
136123 |
T |
|
| Q |
330 |
tctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagaga |
399 |
Q |
| |
|
|||| ||||| |||||||||||| | || ||||||||||| |||||||| || || ||||||||||||| |
|
|
| T |
136122 |
tctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggaaggaaggatgataaagaga |
136053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 17853470 - 17853378
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatgatttgaaagatgctatctttga |
106 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| || ||||| ||| | ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17853470 |
tcttcaagctgtgctggttgatgcagaacagaaacaattcaacgatcttcctgtcaaacaatggcttgatgatttgaaagacgctatctttga |
17853378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 17853191 - 17853116
Alignment:
| Q |
320 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaa |
395 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| || || ||||||||||||||||| || || |||||||||||| |
|
|
| T |
17853191 |
tggtagagtttctcgtagaaccccttcaagttccgtggtaaatgaatctgtcatggtaggaaggaatgatgataaa |
17853116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 14006004 - 14005933
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggcttgatga |
85 |
Q |
| |
|
||||||||||||| || ||||||| ||||||||||| |||| ||| | |||||||||| ||||||| ||||| |
|
|
| T |
14006004 |
tcttcaagctgtgttgaatgatgctgaggagaagcaaatcaccaaccctgctgtcaaagaatggctggatga |
14005933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 17960 - 18025
Alignment:
| Q |
14 |
tcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtgctgtcaaacaatggct |
79 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||||| || |||| ||||| ||||||||| |||||||| |
|
|
| T |
17960 |
tcttcaagctgtactgaatgatgctgaagagaaacaaatcaccaatcctgctgtcaagcaatggct |
18025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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