View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4733-Insertion-7 (Length: 223)
Name: NF4733-Insertion-7
Description: NF4733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4733-Insertion-7 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 42780834 - 42780636
Alignment:
| Q |
8 |
atgttttcatactacctttcttctattgcattgatgttttaaaagtggctgttggagtagcatttcaccatccaatcatttaatttcatgtatcnnnnnn |
107 |
Q |
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| T |
42780834 |
atgttttcatactacctttcttctattgcattgatgttttagaagtggctgttggagtagcatttcaccatccaatcatttaatttcatgtatctttttt |
42780735 |
T |
|
| Q |
108 |
nnaataattaattactttgaagtggatttaaattttaaattcatttagcctgcaagatgcctctgtgcaataaaactcttgagcgtgaaagagtattcc |
206 |
Q |
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|||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||| |
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| T |
42780734 |
ttaatatttaattactttgaagtgaatttaaattttaaattcattttgcctgcaaaatgcctctgcgcaataaaactcttgagcgtgaaagaatattcc |
42780636 |
T |
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