View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4734-Insertion-10 (Length: 362)
Name: NF4734-Insertion-10
Description: NF4734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4734-Insertion-10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 8 - 362
Target Start/End: Original strand, 33833486 - 33833838
Alignment:
| Q |
8 |
aggatttggtcgtgcagcatttgctgttaagttcaatctttgnnnnnnnngagagtcaaaagtcaaagattaaaaatttataagattcgtaattgaaaac |
107 |
Q |
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| T |
33833486 |
aggatttggtcgtgcagcatttgctgttaagttcaatctttgaaaaaaa--agagtcaaaagtcaaagattaaaaatttataagattcgtaattgaaaac |
33833583 |
T |
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| Q |
108 |
atgtttaaaatatactattcagtcctacgcataagaaaaagttgagtcaaccaaagtaagttgatgtatttgatttaaaattagatcaaaaagcaaggca |
207 |
Q |
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|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
33833584 |
atgtttaaaatatactatccaatcctacgcataagaaaaagttgagtcaaccaaagtaagttgatgtatttgatttaaaattaggtcaaaaagcaaggca |
33833683 |
T |
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| Q |
208 |
acagaaacaacttttacctgatggttctggcttgcttaatggaccactctacatcagttgggccggcgggtaatagacccgaggccttactattcgatcc |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
33833684 |
acagaaacaacttttacctgatggttctggcttgcttaatggaccactctacatcagttgggccgacgggtaatagacccgaggccttactattcgatcc |
33833783 |
T |
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| Q |
308 |
agaatagcgaagggttgcggtggtagtaagaatagggttcgtgaaacgagttgat |
362 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
33833784 |
agaatagcgaagggttgcagtggtagtaagaatagggttcgtgaaacgagttgat |
33833838 |
T |
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