View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4734_high_3 (Length: 379)
Name: NF4734_high_3
Description: NF4734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4734_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 20 - 377
Target Start/End: Complemental strand, 7806581 - 7806224
Alignment:
| Q |
20 |
cgcgtgacctctctccataactcaattcgtacatttttcttcttaacccaaaaccctcacaaataaattctccattttttaatccctagaagctttcatg |
119 |
Q |
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| T |
7806581 |
cgcgtgacctctctccataactcaattcctacatttttcttcttagcccaaaaccctcaccaataaattctccattttttaatctctagaagctttcatg |
7806482 |
T |
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| Q |
120 |
ttcaaatcttctataaagtccatcaatttagcttaaaaggaacaagaagtaagtgagatatcccttcctctctctttccatgggctggcacaaaattgcc |
219 |
Q |
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| T |
7806481 |
ttcaaatcttctatcaagtccatcaatttagcttaaaaggaacaagaagtaagtgagaaatcccttcctctctctttccatgggctggcacaaaattgcc |
7806382 |
T |
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| Q |
220 |
cccatttttactctaaaaattccatttttccattttggtagaaattgacgttttgcatgcagaaattagactaatatatgatgtttaaaatttggatctg |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
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| T |
7806381 |
cccatttttactctaaaaattccatttttccattttggtagaaattgacgttttgcatgcagaaattagactaataaatgatgtttaaaatttggatcag |
7806282 |
T |
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| Q |
320 |
gggctgaaggaataggctttggaaggaagcaagaaactttgaagaatatttcaatact |
377 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||| |
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| T |
7806281 |
gggctgaaggaataggctttggaaggaagcaagtaactttgaagaagatttcactact |
7806224 |
T |
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