View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4735-Insertion-8 (Length: 408)
Name: NF4735-Insertion-8
Description: NF4735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4735-Insertion-8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 8 - 408
Target Start/End: Complemental strand, 7077046 - 7076646
Alignment:
| Q |
8 |
catagcttatagcacatgtacatgatcaattatatataaaaatgagatgagatgtaaactctagttcaatcaacgaattcagtctatcattcaattcata |
107 |
Q |
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| T |
7077046 |
catagcttatagcacatgtacatgatcaattatatataaaaatgagatgagatgtaaactctagttcaatcaacgaattcagtctatcattcgattcata |
7076947 |
T |
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| Q |
108 |
aaaaccatcatcaatcgaacatatgggtgaaaacaactccatcatagcaagaaacctcccccgtgatcacgaataaccatcacaattccaacacaattaa |
207 |
Q |
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| T |
7076946 |
aaaaccatcatcaatcgaacatatgggtgaaaacaactccatcatagcaagaaacctcccccgtgatcacgaataaccatcacaattccaacacaattaa |
7076847 |
T |
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| Q |
208 |
gagtatatgaagaagtgcatcaacattgcattttaaacgattggacgaaggcttgaaccacttatcacacaccccatcttctgtaatctgcatctgttgc |
307 |
Q |
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| T |
7076846 |
gagtatatgaagaagtgcgtcaacattgcattttaaacgattggacgaaggcttgaaccacttatcacacaccccatcttctgtaatctgcatctgttgc |
7076747 |
T |
|
| Q |
308 |
tatggaataacgtgtactctgtccgtcttgcagcaggtgctgtccgcaactagctacaaggtctgcagattcatgtacatcattccaaactttgcaattt |
407 |
Q |
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| T |
7076746 |
tgtggaataacgtgtactctgtccgtcttgcagcaggtgctgtccgcaactagctacaaggtctgcagattcatgtacatcattccaaactttgcaattt |
7076647 |
T |
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| Q |
408 |
c |
408 |
Q |
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| T |
7076646 |
c |
7076646 |
T |
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