View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4736-Insertion-3 (Length: 940)
Name: NF4736-Insertion-3
Description: NF4736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4736-Insertion-3 |
 | |
|
| [»] scaffold0064 (3 HSPs) |
| | |
|
| [»] scaffold0128 (4 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 773; Significance: 0; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 773; E-Value: 0
Query Start/End: Original strand, 22 - 922
Target Start/End: Original strand, 7327706 - 7328600
Alignment:
| Q |
22 |
actagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataattcaaccaacactt |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7327706 |
actagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataattcaaccaacactt |
7327805 |
T |
|
| Q |
122 |
ataaggttgtagccttgcattataatagcaattttagcaaccctaaggttgaggtgagcatttttactttgggtgataatgtttggagaactattcaaac |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7327806 |
ataaggttgtagccttgcattataatagcaattttagcaatcctaaggttgaggtgagcatttttactttgggtgataatgtttggaaaactattcaaac |
7327905 |
T |
|
| Q |
222 |
tttagctgttttgcctcttcagatagactttgcttattggagagtttacgagggtgtacaatttaattgcactgttaactggttggcacgcaatcggatt |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7327906 |
tttagctgttttgcctcttcagatagactttgcttattggagagtttacgagggtgtacaatttaattgcactgttaactggttggcacgcaatcggatt |
7328005 |
T |
|
| Q |
322 |
cctaccaatactgctagtattattaatgaatttgtgattgtttcactacatctagggaccgagacatacacaaagttgatgctccctcctggtgctgagg |
421 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7328006 |
cctaccaatactgctagtattattaatgaatttgtgattgtttcactacatctagggaccgagacatacacaaagttgatgctccctcctggtgctgagg |
7328105 |
T |
|
| Q |
422 |
agtcgacacattcatcaaatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatt |
521 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7328106 |
agtcgacacattcatcaaatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatt |
7328205 |
T |
|
| Q |
522 |
tggagatgacaggtcttggactaaattctttacatttagctatcacaaccttcaagtgaatttaaattcaagatttgtttactcgtggttgaaattaaag |
621 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7328206 |
tggagatgacaggtcttggactaaattctttacatttagctatcacaaccttcaagtgaatttaaattcaagatttgtttactcgtggttgaaattaaag |
7328305 |
T |
|
| Q |
622 |
gcattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctacataaccaagcaattctctataacttgagaactaatagactactggaat |
721 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7328306 |
gcattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctgcataaccaagcaattctctataacttgagaactaatagagtactggaat |
7328405 |
T |
|
| Q |
722 |
ctagagttaacaaaaagatatgttggtactctatccaaggattatgtcgaaggtccgggtttcaacctgctgaatgtaagtttttctcccacataatatt |
821 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
7328406 |
ctagagttaacaaaaagatatgttggtactctat-caaggattatgtcgaaagt-ctggtttcaacctgctgaaagtaagtttttctccaacataatatt |
7328503 |
T |
|
| Q |
822 |
tattttcaatttatgacctaagtttttgccttcgtttcaaatgt-tgagtatttgcttacctttagaaactttg-cctagatatggtgaatcacccgact |
919 |
Q |
| |
|
|| |||||||||||| || || |||||||||||||| |||| ||||||||||||| |||||| ||||||| | |||||||||||||||| |||||| |
|
|
| T |
7328504 |
ta-tttcaatttatgtacttag-ttttgccttcgttt---atgtgtgagtatttgctttactttag-aactttgtcatagatatggtgaatcaaccgact |
7328597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 339 - 826
Target Start/End: Complemental strand, 7311435 - 7310950
Alignment:
| Q |
339 |
tattattaatgaatttgtgattgtttcactacatctagggaccgagacatacacaaagttgatgctccctcctggtgctgaggagtcgacacattcatca |
438 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| |
|
|
| T |
7311435 |
tattatttatgaatttgtgattatttcactacatatagggactgagacatacacaaagttgatgctccctccaagtgctgacaagtcgacacatttatca |
7311336 |
T |
|
| Q |
439 |
aatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtctt |
538 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
7311335 |
agtgtttgtgtgttgatgaactccttctgcttttctcaagatttcaacggaacagattttgttatatggaagatgacagaatttggagacgaccggtctt |
7311236 |
T |
|
| Q |
539 |
ggactaaattctttacatttagctatcacaaccttcaagtgaatttaaattcaagatttgtttactcgtggttgaaattaaaggcattgcatctttctga |
638 |
Q |
| |
|
||||| | || |||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
7311235 |
ggactcagttatttacatttagctatcacaatcttcgaatgaatttaaattcaagagttgtttactcgaggttgaaattaaagccgttgcatctttctga |
7311136 |
T |
|
| Q |
639 |
agatggtgatacaatcgtattcgcaagctgcctacataaccaagcaattctctataacttgagaactaatagactactggaatctagagttaacaaaaag |
738 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
7311135 |
agatggtgatacaatagtattcggaagctgcctagataaccaagcaattctgtataacttgagaactaatagagtactgaaatctagagttaacaaaaag |
7311036 |
T |
|
| Q |
739 |
atatgttggtactctatccaaggattatgtcgaaggtccgggtttcaacctgctgaatgtaagtttttctcccacataatatttattt |
826 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| || | ||||||||||| |||| |||||||||| || ||||||||||||||| |
|
|
| T |
7311035 |
atatgttggttctctat-caaggattatgtcgaaagt-ctggtttcaacctattgaaagtaagtttttttctaacataatatttattt |
7310950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 8 - 323
Target Start/End: Complemental strand, 7311796 - 7311481
Alignment:
| Q |
8 |
tctggaaccccgccactagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataa |
107 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| |||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
7311796 |
tctggaaccccgccaccaggaaaatatctgataggttaggtagtttcgatgatttcgattatggatcgaattcttggaggttcgtgttttgttatgataa |
7311697 |
T |
|
| Q |
108 |
ttcaaccaacacttataaggttgtagccttgcattataatagcaattttagcaaccctaaggttgaggtgagcatttttactttgggtgataatgtttgg |
207 |
Q |
| |
|
|||||| || |||||||||||| ||||||||||||||| | ||| | | || ||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7311696 |
ttcaacggactattataaggttgtggccttgcattataatggaaatgtcaacagccccgtggttgaggtgagcattttcactttgggtgataatgtttgg |
7311597 |
T |
|
| Q |
208 |
agaactattcaaactttagctgttttgcctcttcagatagactttgcttattggagagtttacgagggtgtacaatttaattgcactgttaactggttgg |
307 |
Q |
| |
|
|||||||| ||||||||| || || ||||||||||| | || | ||||||||| | || || ||||||||||| || ||||| ||||||||||||| |
|
|
| T |
7311596 |
agaactatacaaactttatcttttgtgcctcttcagcttctctatagctattggagaatgtatgatggtgtacaattcaactgcacggttaactggttgg |
7311497 |
T |
|
| Q |
308 |
cacgcaatcggattcc |
323 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
7311496 |
cacgcaatcggattcc |
7311481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 619 - 836
Target Start/End: Complemental strand, 7306603 - 7306389
Alignment:
| Q |
619 |
aaggcattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctacataaccaagcaattctctataacttgagaactaatagactactgg |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
7306603 |
aaggcattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctagataaccaagcaattctgtataacttgagaactaatagagtactga |
7306504 |
T |
|
| Q |
719 |
aatctagagttaacaaaaagatatgttggtactctatccaaggattatgtcgaaggtccgggtttcaacctgctgaatgtaagtttttctcccacataat |
818 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| |||||||||||||||| || | ||| ||||||| |||| ||| |||||||||| ||||||| |
|
|
| T |
7306503 |
aatctagagtcaacaaaaagatatgttggttctctat-caaggattatgtcgaaagt-ctggtctcaacctattgaacgtaggtttttctccaacataat |
7306406 |
T |
|
| Q |
819 |
atttattttcaatttatg |
836 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
7306405 |
attta-tttcaatttatg |
7306389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 7306701 - 7306602
Alignment:
| Q |
8 |
tctggaaccccgccactagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataa |
107 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
7306701 |
tctggaaccccgccaccaggaaaatatctgatagatcaggctgtttcgatgatttcaattataaatcgaattcttggaggttcgtgttttgttatgataa |
7306602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 443 - 569
Target Start/End: Complemental strand, 35206045 - 35205919
Alignment:
| Q |
443 |
tttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttggac |
542 |
Q |
| |
|
|||||||| ||| ||||||||| || |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
35206045 |
tttgtgtgctgaggaactccttttgtttttatcatgatttcaatggaactgattttgttatatggaagatgacagaatttggaaatgacaagtcttggac |
35205946 |
T |
|
| Q |
543 |
taaattctttacatttagctatcacaa |
569 |
Q |
| |
|
| ||||| ||| ||||||||||||||| |
|
|
| T |
35205945 |
tcaattccttaaatttagctatcacaa |
35205919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 447 - 569
Target Start/End: Complemental strand, 21210598 - 21210476
Alignment:
| Q |
447 |
tgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttggactaaa |
546 |
Q |
| |
|
|||||| | ||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||||| |||||||||| | |
|
|
| T |
21210598 |
tgtgtttaggaacttcttatgcctttatcatgatttcaacggaactgattttgttatatggaagatgacaaagtttggagatgacaagtcttggactcta |
21210499 |
T |
|
| Q |
547 |
ttctttacatttagctatcacaa |
569 |
Q |
| |
|
||| ||| ||||||||||||||| |
|
|
| T |
21210498 |
ttccttaaatttagctatcacaa |
21210476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 20456021 - 20456230
Alignment:
| Q |
10 |
tggaaccccgccactagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataatt |
109 |
Q |
| |
|
|||||||| ||||| || ||||| ||||||| |||||| | ||| ||||| ||||||| | |||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
20456021 |
tggaaccctgccaccaggaaaatttctgataaattaggatatttgcatgatgacaattatagacggaactcttggatgtttgtgttttgttttgataatt |
20456120 |
T |
|
| Q |
110 |
caaccaacacttataaggttgtagccttgcattataatagcaatttt-agcaaccctaaggttgaggtgagcatttttactttgggtgataatgtttgga |
208 |
Q |
| |
|
||||| |||| ||||||||||| |||||| ||| | | || |||| | || ||| ||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
20456121 |
caaccgacacatataaggttgtggccttgaattgtga-agatgttttcaaaaaacctgaggttaaaatgagcatttttagtttgggtgataatgtttgga |
20456219 |
T |
|
| Q |
209 |
gaactattcaa |
219 |
Q |
| |
|
||| ||||||| |
|
|
| T |
20456220 |
gaagtattcaa |
20456230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 441 - 563
Target Start/End: Complemental strand, 21218831 - 21218709
Alignment:
| Q |
441 |
tgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttgg |
540 |
Q |
| |
|
|||||||||||||||||||||||| || |||| ||| |||||||| ||| ||||| ||||||||| | ||||| |||||||||||||| | ||||||| |
|
|
| T |
21218831 |
tgtttgtgtgttgatgaactccttttgtttttatcacgatttcaatggaactgatttggttatatggcaaatgacggaatttggagatgataagtcttgg |
21218732 |
T |
|
| Q |
541 |
actaaattctttacatttagcta |
563 |
Q |
| |
|
||| ||||| | | ||||||||| |
|
|
| T |
21218731 |
actcaattcctcaaatttagcta |
21218709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 610 - 809
Target Start/End: Complemental strand, 35205863 - 35205658
Alignment:
| Q |
610 |
ttgaaattaaaggcattgcatctttctgaagatggtgatacaatcgtattcgca---agctgcctacataaccaagcaatt-----ctctataacttgag |
701 |
Q |
| |
|
|||| ||||| | |||||||||||||||| |||||||||||| ||||||||||| | | |||| | |||||| |||| |||||||||| ||| |
|
|
| T |
35205863 |
ttgatattaatgccattgcatctttctgaggatggtgatacactcgtattcgcagcaaacaacctaaaacaccaagtaattatattctctataactggag |
35205764 |
T |
|
| Q |
702 |
aactaatagactactggaatctagagttaacaaaaagatatgttggtactctatccaaggattatgtcgaaggtccgggtttcaacctgctgaatgtaag |
801 |
Q |
| |
|
||| |||||| ||||| ||||| | ||||||| ||||||||||||| | |||| |||||||||||||||| | || ||||||||| | |||||||||| |
|
|
| T |
35205763 |
aaccaatagagtactgaaatcttcaattaacaataagatatgttggttcactat-caaggattatgtcgaaag-cctggtttcaactagttgaatgtaag |
35205666 |
T |
|
| Q |
802 |
tttttctc |
809 |
Q |
| |
|
|| ||||| |
|
|
| T |
35205665 |
ttgttctc |
35205658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 20414392 - 20414508
Alignment:
| Q |
10 |
tggaaccccgccactagaaaaatatctgatagattaggttgtttcgatgatttcaattatgaatggaattcttggaggtttgtgttttgttatgataatt |
109 |
Q |
| |
|
|||||||| ||||| |||||||| ||||||| |||||| | ||| ||| | ||||||| | |||| ||||||| |||||||||| |||||||| ||| |
|
|
| T |
20414392 |
tggaacccggccaccagaaaaatttctgataaattaggatatttgcatgctgacaattatagacggaactcttggatgtttgtgtttggttatgatgatt |
20414491 |
T |
|
| Q |
110 |
caaccaacacttataag |
126 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
20414492 |
caaccaacacttataag |
20414508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 441 - 583
Target Start/End: Original strand, 20414826 - 20414971
Alignment:
| Q |
441 |
tgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaa---aacagattttgttatatggaagatgacagaatttggagatgacaggtct |
537 |
Q |
| |
|
|||||||||||| ||||||||||| || |||| |||| || | | ||| ||| |||||| ||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
20414826 |
tgtttgtgtgttcatgaactccttttgtttttatcataatatgatcaacggaaccgattttattatatggaagatgatgaaatttggagatgacaagtct |
20414925 |
T |
|
| Q |
538 |
tggactaaattctttacatttagctatcacaaccttcaagtgaatt |
583 |
Q |
| |
|
|||||| ||||| ||| ||||| | || | ||||||| |||||||| |
|
|
| T |
20414926 |
tggactcaattccttaaatttaacaatgataaccttcgagtgaatt |
20414971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 354 - 541
Target Start/End: Original strand, 20456359 - 20456552
Alignment:
| Q |
354 |
tgtgattgtttcactacatctagggaccgagacatacacaaagttgatgctccctcctggtgctgaggagtcgacacattcat---caaatgtttgtgtg |
450 |
Q |
| |
|
|||||||||||| || ||||||| || |||||||||||||||||||||| |||||| || |||| || | || | ||| ||| |||||||||| |
|
|
| T |
20456359 |
tgtgattgtttcccttgatctaggtactgagacatacacaaagttgatgccccctccaagttgtgagaaggtgtcatgtgcatatgcaagtgtttgtgtg |
20456458 |
T |
|
| Q |
451 |
ttgatgaactccttatgcttttctcatgatt---tcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttgga |
541 |
Q |
| |
|
|||||||||||||| || |||| |||| | ||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
20456459 |
ttgatgaactccttttgtttttatcataacacgatcaacggaaccaattttgttatatggaagatgacaaaatttggggatgacaagtcttgga |
20456552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 13888164 - 13888093
Alignment:
| Q |
494 |
attttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattctttacatttagctatc |
565 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| || | |||||||||| ||||| ||| ||||||||||| |
|
|
| T |
13888164 |
attttgttatatggaaaatgacaaaatttggagacgaaaagtcttggactcaattccttaaatttagctatc |
13888093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 610 - 773
Target Start/End: Complemental strand, 21210420 - 21210258
Alignment:
| Q |
610 |
ttgaaattaaaggcattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctacataaccaagcaattctctataacttgagaactaata |
709 |
Q |
| |
|
|||||||||||| | |||||||||||||| || ||||||||| ||||||| || | ||| || ||||||||| |||| |||||||| |||| ||||| |
|
|
| T |
21210420 |
ttgaaattaaagccggtgcatctttctgaaaatattgatacaatagtattcgtaaacaacctgcaaaaccaagcagttctatataacttcagaaataata |
21210321 |
T |
|
| Q |
710 |
gactactggaatctagagttaacaaaaagatatgttggtactctatccaaggattatgtcgaag |
773 |
Q |
| |
|
| ||||| |||| | | ||||| | |||||| |||||| || || || ||||||||||||||| |
|
|
| T |
21210320 |
cagtactgaaatccaaaattaaccataagatacgttggttctgta-ccgaggattatgtcgaag |
21210258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 623 - 756
Target Start/End: Original strand, 20414999 - 20415132
Alignment:
| Q |
623 |
cattgcatctttctgaagatggtgatacaatcgtattcgcaagctgcctacataaccaagcaattctctataacttgagaactaatagactactggaatc |
722 |
Q |
| |
|
|||||||||||| || ||||||||||| | |||||||||| | ||||||| ||| ||||||||||||||| | ||||| ||||| | || || || | |
|
|
| T |
20414999 |
cattgcatcttttcaaaaatggtgatacacttgtattcgcaaacagcctacaagaccgagcaattctctataattggagaaataatatagtattgaaacc |
20415098 |
T |
|
| Q |
723 |
tagagttaacaaaaagatatgttggtactctatc |
756 |
Q |
| |
|
||||||||||| || | |||||||| ||||||| |
|
|
| T |
20415099 |
cagagttaacaataacaaatgttggttctctatc |
20415132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 21210895 - 21210846
Alignment:
| Q |
81 |
ttggaggtttgtgttttgttatgataattcaaccaacacttataaggttg |
130 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
21210895 |
ttggaagtttgtgttttgttatgataatttaaccgacacttataaggttg |
21210846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 526
Target Start/End: Original strand, 36260225 - 36260285
Alignment:
| Q |
466 |
tgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggag |
526 |
Q |
| |
|
||||||||| |||||| ||| ||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
36260225 |
tgcttttctaatgattacaagaaaactgattttgttatatggaagatggaagaatttggag |
36260285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22525630 - 22525580
Alignment:
| Q |
87 |
gtttgtgttttgttatgataattcaaccaacacttataaggttgtagcctt |
137 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
22525630 |
gtttgtgtttggttatgataattcaaccgacacctataaagttgtagcctt |
22525580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 22534240 - 22534286
Alignment:
| Q |
91 |
gtgttttgttatgataattcaaccaacacttataaggttgtagcctt |
137 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
22534240 |
gtgtttggttatgataattcaaccgacacctataaggttgtagcctt |
22534286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 20414570 - 20414619
Alignment:
| Q |
176 |
tgagcatttttactttgggtgataatgtttggagaactattcaaacttta |
225 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||| ||| |||| |
|
|
| T |
20414570 |
tgagcatttttagtttgggtgataatgtttggagaagtattaaaagttta |
20414619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 21210803 - 21210756
Alignment:
| Q |
172 |
gaggtgagcatttttactttgggtgataatgtttggagaactattcaa |
219 |
Q |
| |
|
|||||||||||||||| ||| ||||||||| |||||| |||||||||| |
|
|
| T |
21210803 |
gaggtgagcatttttagtttaggtgataatatttggaaaactattcaa |
21210756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 22473284 - 22473213
Alignment:
| Q |
438 |
aaatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaa |
509 |
Q |
| |
|
|||||||||||| |||||||||||| | || ||| ||||||||| || |||| ||||||||||||||||| |
|
|
| T |
22473284 |
aaatgtttgtgtattgatgaactccctgtgtgtttatcatgatttaaaagaaactgattttgttatatggaa |
22473213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 466 - 564
Target Start/End: Original strand, 36263025 - 36263123
Alignment:
| Q |
466 |
tgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattctttacatttagctat |
564 |
Q |
| |
|
||||||||| |||| | || ||||| ||||||||||||||||||||| ||||||||||| ||| |||||||||| || || ||| | |||||||| |
|
|
| T |
36263025 |
tgcttttctaatgactataagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggactcaactcattaaagttagctat |
36263123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 22525544 - 22525511
Alignment:
| Q |
191 |
tgggtgataatgtttggagaactattcaaacttt |
224 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
22525544 |
tgggtgataatgtttggagaactattaaaacttt |
22525511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 403
Target Start/End: Original strand, 36260106 - 36260159
Alignment:
| Q |
350 |
aatttgtgattgtttcactacatctagggaccgagacatacacaaagttgatgc |
403 |
Q |
| |
|
||||||||||||||||||| |||| | || |||||||||||||||||||||| |
|
|
| T |
36260106 |
aatttgtgattgtttcacttgatctggaaacagagacatacacaaagttgatgc |
36260159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 581
Target Start/End: Original strand, 24206 - 24292
Alignment:
| Q |
495 |
ttttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattctttacatttagctatcacaaccttcaagtgaa |
581 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||| ||| ||||| ||| ||||||||||||| | |||||| |||| |
|
|
| T |
24206 |
ttttgttatatggaagatgacagaatatggagatgaaaagtcttgaactcaattccttaaatttagctatcacgatcttcaaatgaa |
24292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 23807 - 23855
Alignment:
| Q |
82 |
tggaggtttgtgttttgttatgataattcaaccaacacttataaggttg |
130 |
Q |
| |
|
|||| |||||||||| ||||||| |||| |||||||||||||||||||| |
|
|
| T |
23807 |
tggaagtttgtgtttggttatgagaatttaaccaacacttataaggttg |
23855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 748
Target Start/End: Original strand, 24360 - 24432
Alignment:
| Q |
676 |
aaccaagcaattctctataacttgagaactaatagactactggaatctagagttaacaaaaagatatgttggt |
748 |
Q |
| |
|
|||| ||||||||||||||| | || || ||||||| || || || |||| |||||||||||||||||||||| |
|
|
| T |
24360 |
aaccgagcaattctctataattggataaataatagagtagtgaaaactagggttaacaaaaagatatgttggt |
24432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 682 - 755
Target Start/End: Complemental strand, 31442874 - 31442801
Alignment:
| Q |
682 |
gcaattctctataacttgagaactaatagactactggaatctagagttaacaaaaagatatgttggtactctat |
755 |
Q |
| |
|
|||||||||||||| | ||||| ||||||| || || || ||||||||||||||||||||||||||| |||||| |
|
|
| T |
31442874 |
gcaattctctataattggagaaataatagagtagtgaaaactagagttaacaaaaagatatgttggttctctat |
31442801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 474 - 530
Target Start/End: Complemental strand, 31443061 - 31443005
Alignment:
| Q |
474 |
tcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatga |
530 |
Q |
| |
|
||||||||| || |||| ||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
31443061 |
tcatgatttgaatgaaaccgatttcgttatatggaagatgacaaaatttggagatga |
31443005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0128
Description:
Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 474 - 549
Target Start/End: Original strand, 4117 - 4192
Alignment:
| Q |
474 |
tcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattc |
549 |
Q |
| |
|
|||||||||||| || || ||||| ||||||||||||||||||||||||||| |||| | ||||||||| ||||| |
|
|
| T |
4117 |
tcatgatttcaagaagaccgatttggttatatggaagatgacagaatttggaaatgaaaattcttggactcaattc |
4192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 566
Target Start/End: Original strand, 25562 - 25690
Alignment:
| Q |
438 |
aaatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtct |
537 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| ||| ||||| || |||| ||||||||||||||||| ||| ||||||||| ||| | ||| |
|
|
| T |
25562 |
aaatgtttgtgtgttgatgaactccctatgtgtttatcacgatttaaaggaaactgattttgttatatggaaattgatggaatttggaaatgtaaattct |
25661 |
T |
|
| Q |
538 |
tggactaaattctttacatttagctatca |
566 |
Q |
| |
|
||||| ||||| ||| ||||| |||||| |
|
|
| T |
25662 |
tggacccaattccttaaatttacctatca |
25690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 567
Target Start/End: Original strand, 8513 - 8642
Alignment:
| Q |
438 |
aaatgtttgtgtgttgatgaactccttatgcttttctcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtct |
537 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||| ||| ||||| || |||| ||||||||||||||||| ||| ||||||||| |||| | ||| |
|
|
| T |
8513 |
aaatgtttgtgtgttaatgaactccctatgtgtttatcaagatttaaaggaaactgattttgttatatggaaattgatggaatttggaaatgaaaattct |
8612 |
T |
|
| Q |
538 |
tggactaaattctttacatttagctatcac |
567 |
Q |
| |
|
|||| ||||| || ||||||||||||| |
|
|
| T |
8613 |
tggatccaattccttcgatttagctatcac |
8642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 3666 - 3705
Alignment:
| Q |
8 |
tctggaaccccgccactagaaaaatatctgatagattagg |
47 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
3666 |
tctggaaccccgccaccagaaaaatatctgataaattagg |
3705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 474 - 549
Target Start/End: Original strand, 42298091 - 42298166
Alignment:
| Q |
474 |
tcatgatttcaacaaaacagattttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattc |
549 |
Q |
| |
|
|||| ||||||| || || ||||| |||||||||||||||| ||||||||||||||| | ||||||||| ||||| |
|
|
| T |
42298091 |
tcataatttcaagaatactgatttagttatatggaagatgatagaatttggagatgaaaattcttggactcaattc |
42298166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 2910627 - 2910674
Alignment:
| Q |
91 |
gtgttttgttatgataattcaaccaacacttataaggttgtagccttg |
138 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
2910627 |
gtgtttggttatgataattcaactcacacttataaggttgtggccttg |
2910674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 493 - 559
Target Start/End: Original strand, 20980603 - 20980669
Alignment:
| Q |
493 |
gattttgttatatggaagatgacagaatttggagatgacaggtcttggactaaattctttacattta |
559 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||| |||||||||||| ||| ||| ||||| |
|
|
| T |
20980603 |
gattttgttatatggaaaatgacagaatttagagttgaagagtcttggactaagttccttaaattta |
20980669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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