View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4736-Insertion-6 (Length: 639)

Name: NF4736-Insertion-6
Description: NF4736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4736-Insertion-6
NF4736-Insertion-6
[»] chr1 (52 HSPs)
chr1 (7-275)||(6517650-6517918)
chr1 (302-483)||(6517945-6518126)
chr1 (487-602)||(5345483-5345598)
chr1 (56-142)||(6513335-6513420)
chr1 (602-639)||(6367954-6367991)
chr1 (601-639)||(19515817-19515855)
chr1 (601-639)||(23209719-23209757)
chr1 (601-639)||(30711719-30711757)
chr1 (601-639)||(36694280-36694318)
chr1 (601-639)||(36710381-36710419)
chr1 (601-639)||(43759214-43759252)
chr1 (602-639)||(7820953-7820990)
chr1 (602-639)||(17661851-17661888)
chr1 (601-638)||(34464842-34464879)
chr1 (602-639)||(40772851-40772888)
chr1 (602-639)||(46899992-46900029)
chr1 (603-639)||(6367562-6367598)
chr1 (602-638)||(19017628-19017664)
chr1 (603-639)||(24009575-24009611)
chr1 (603-639)||(32917652-32917688)
chr1 (603-639)||(34464449-34464485)
chr1 (601-633)||(35152341-35152373)
chr1 (601-633)||(36694646-36694678)
chr1 (601-633)||(36710747-36710779)
chr1 (603-639)||(40772507-40772543)
chr1 (7-38)||(6521354-6521385)
chr1 (603-638)||(30711327-30711362)
chr1 (604-639)||(35152722-35152757)
chr1 (602-633)||(48779517-48779548)
chr1 (601-639)||(5734008-5734046)
chr1 (601-639)||(13914066-13914104)
chr1 (602-632)||(17662249-17662279)
chr1 (601-639)||(35473629-35473667)
chr1 (601-639)||(37578190-37578228)
chr1 (602-632)||(37578591-37578621)
chr1 (601-639)||(41098731-41098769)
chr1 (601-639)||(42533022-42533060)
chr1 (602-639)||(1103853-1103890)
chr1 (307-336)||(6518149-6518178)
chr1 (604-633)||(13914465-13914494)
chr1 (606-639)||(17692577-17692610)
chr1 (602-639)||(25647883-25647920)
chr1 (606-639)||(40435348-40435381)
chr1 (605-634)||(40439586-40439615)
chr1 (603-639)||(6518188-6518224)
chr1 (601-633)||(19018027-19018059)
chr1 (603-639)||(26024784-26024820)
chr1 (603-639)||(31197065-31197101)
chr1 (603-639)||(34849011-34849047)
chr1 (603-639)||(34850457-34850493)
chr1 (605-633)||(42248475-42248503)
chr1 (603-639)||(46899061-46899097)
[»] chr7 (33 HSPs)
chr7 (516-585)||(12832077-12832143)
chr7 (517-574)||(10334368-10334423)
chr7 (601-639)||(28105499-28105537)
chr7 (604-639)||(42019598-42019633)
chr7 (601-639)||(5457299-5457337)
chr7 (601-639)||(27396987-27397025)
chr7 (601-639)||(28469400-28469438)
chr7 (601-639)||(45010996-45011034)
chr7 (602-639)||(24389177-24389214)
chr7 (602-639)||(28469009-28469046)
chr7 (602-638)||(10936187-10936223)
chr7 (601-633)||(17886888-17886920)
chr7 (602-633)||(29141574-29141605)
chr7 (601-639)||(17102381-17102419)
chr7 (605-639)||(24388821-24388855)
chr7 (603-633)||(37657235-37657265)
chr7 (603-633)||(40380082-40380112)
chr7 (603-633)||(42362450-42362480)
chr7 (601-639)||(42731811-42731849)
chr7 (601-639)||(48788801-48788839)
chr7 (602-639)||(2640177-2640214)
chr7 (602-639)||(6253832-6253869)
chr7 (602-639)||(6571012-6571049)
chr7 (602-639)||(17102019-17102056)
chr7 (602-639)||(22871669-22871706)
chr7 (602-639)||(27991738-27991775)
chr7 (602-639)||(32053142-32053179)
chr7 (602-639)||(32298776-32298813)
chr7 (603-639)||(10935794-10935830)
chr7 (603-639)||(18670255-18670291)
chr7 (601-633)||(20426728-20426760)
chr7 (606-638)||(42019990-42020022)
chr7 (603-639)||(42731419-42731455)
[»] chr8 (28 HSPs)
chr8 (601-639)||(36186456-36186494)
chr8 (601-639)||(16388581-16388619)
chr8 (597-639)||(23663539-23663581)
chr8 (601-639)||(33357496-33357534)
chr8 (603-637)||(38862618-38862652)
chr8 (601-639)||(39072033-39072071)
chr8 (602-639)||(4995048-4995085)
chr8 (601-634)||(34060487-34060520)
chr8 (603-639)||(16388918-16388954)
chr8 (599-639)||(23663906-23663946)
chr8 (603-639)||(31608905-31608941)
chr8 (603-639)||(39071676-39071712)
chr8 (602-638)||(40318357-40318393)
chr8 (602-633)||(13186059-13186090)
chr8 (601-639)||(12198948-12198986)
chr8 (601-639)||(12443376-12443414)
chr8 (601-639)||(13186451-13186489)
chr8 (605-639)||(40317966-40318000)
chr8 (603-633)||(42803616-42803646)
chr8 (602-639)||(8316652-8316689)
chr8 (602-639)||(8316980-8317017)
chr8 (602-639)||(20386822-20386859)
chr8 (606-639)||(38862955-38862988)
chr8 (601-633)||(4994655-4994687)
chr8 (602-638)||(9065763-9065799)
chr8 (603-639)||(20385568-20385604)
chr8 (601-633)||(34176443-34176475)
chr8 (603-639)||(38956064-38956100)
[»] chr4 (36 HSPs)
chr4 (601-639)||(24411740-24411778)
chr4 (601-639)||(39539310-39539348)
chr4 (604-639)||(15507674-15507709)
chr4 (597-639)||(24349668-24349710)
chr4 (601-639)||(34765378-34765416)
chr4 (601-639)||(51692911-51692949)
chr4 (602-639)||(46661306-46661343)
chr4 (603-639)||(18831709-18831745)
chr4 (599-639)||(34765772-34765812)
chr4 (602-638)||(35028391-35028427)
chr4 (601-633)||(51692551-51692583)
chr4 (601-633)||(52909651-52909683)
chr4 (602-633)||(14801735-14801766)
chr4 (602-633)||(17355924-17355955)
chr4 (602-633)||(54713615-54713646)
chr4 (601-639)||(148147-148185)
chr4 (601-639)||(7451832-7451870)
chr4 (601-639)||(10781876-10781914)
chr4 (601-639)||(13058035-13058073)
chr4 (605-639)||(15508064-15508098)
chr4 (601-639)||(24711472-24711510)
chr4 (601-639)||(35027996-35028034)
chr4 (599-633)||(44967436-44967470)
chr4 (601-639)||(50418666-50418704)
chr4 (601-639)||(50419029-50419067)
chr4 (602-639)||(10780712-10780749)
chr4 (602-639)||(10974321-10974358)
chr4 (602-639)||(23613308-23613345)
chr4 (602-639)||(24350824-24350861)
chr4 (602-639)||(24711110-24711147)
chr4 (606-639)||(43155532-43155565)
chr4 (602-639)||(48528484-48528521)
chr4 (602-631)||(53129906-53129935)
chr4 (606-639)||(54086698-54086731)
chr4 (603-639)||(7452195-7452231)
chr4 (603-639)||(23613670-23613706)
[»] chr5 (45 HSPs)
chr5 (598-639)||(20840528-20840569)
chr5 (601-639)||(5993887-5993925)
chr5 (601-639)||(6150812-6150850)
chr5 (601-639)||(14194421-14194459)
chr5 (602-636)||(16083338-16083372)
chr5 (601-639)||(20814527-20814565)
chr5 (601-639)||(35512146-35512184)
chr5 (602-639)||(6150453-6150490)
chr5 (602-639)||(16157247-16157284)
chr5 (602-639)||(18247468-18247505)
chr5 (597-638)||(19518000-19518041)
chr5 (602-639)||(21265534-21265571)
chr5 (601-638)||(27937053-27937090)
chr5 (602-639)||(39453691-39453728)
chr5 (603-639)||(5024019-5024055)
chr5 (603-639)||(17202791-17202827)
chr5 (602-638)||(32242634-32242670)
chr5 (602-634)||(42265889-42265921)
chr5 (604-639)||(18247087-18247122)
chr5 (600-639)||(35512506-35512545)
chr5 (604-639)||(38442459-38442494)
chr5 (600-639)||(38475391-38475430)
chr5 (603-633)||(186817-186847)
chr5 (605-639)||(19892310-19892344)
chr5 (601-639)||(20840829-20840867)
chr5 (601-639)||(28269420-28269458)
chr5 (601-639)||(28770867-28770905)
chr5 (601-639)||(32242240-32242278)
chr5 (605-639)||(39453302-39453336)
chr5 (602-639)||(3528872-3528909)
chr5 (606-639)||(5024410-5024443)
chr5 (606-639)||(11740690-11740723)
chr5 (602-639)||(11761748-11761785)
chr5 (602-639)||(11762109-11762146)
chr5 (602-639)||(18670201-18670238)
chr5 (602-639)||(24547517-24547554)
chr5 (606-639)||(27937391-27937424)
chr5 (602-639)||(42265734-42265771)
chr5 (606-639)||(43159206-43159239)
chr5 (603-639)||(3529234-3529270)
chr5 (601-633)||(13362248-13362280)
chr5 (605-633)||(19892706-19892734)
chr5 (601-633)||(20814134-20814166)
chr5 (603-639)||(27587148-27587184)
chr5 (603-639)||(27587507-27587543)
[»] chr2 (22 HSPs)
chr2 (602-639)||(36382519-36382556)
chr2 (602-639)||(37895346-37895383)
chr2 (603-639)||(10713115-10713151)
chr2 (605-639)||(36480110-36480144)
chr2 (601-639)||(39423907-39423945)
chr2 (602-639)||(3555249-3555286)
chr2 (602-639)||(36755480-36755517)
chr2 (600-639)||(11163415-11163454)
chr2 (601-639)||(15848480-15848518)
chr2 (603-633)||(30729621-30729651)
chr2 (600-638)||(34448188-34448226)
chr2 (604-633)||(2318160-2318189)
chr2 (602-639)||(2318902-2318939)
chr2 (606-639)||(6588686-6588719)
chr2 (599-632)||(6657874-6657907)
chr2 (602-639)||(15848087-15848124)
chr2 (602-639)||(16099416-16099453)
chr2 (602-639)||(34447812-34447849)
chr2 (606-639)||(37895739-37895772)
chr2 (601-633)||(36382159-36382191)
chr2 (601-633)||(39498677-39498709)
chr2 (607-639)||(44713799-44713831)
[»] chr6 (20 HSPs)
chr6 (601-639)||(3059255-3059293)
chr6 (605-639)||(11434804-11434838)
chr6 (601-639)||(30726151-30726189)
chr6 (597-639)||(30804253-30804295)
chr6 (601-639)||(33647343-33647381)
chr6 (602-639)||(679865-679902)
chr6 (602-639)||(3059648-3059685)
chr6 (602-639)||(21628105-21628142)
chr6 (602-639)||(33517926-33517963)
chr6 (601-633)||(12081034-12081066)
chr6 (601-639)||(681120-681158)
chr6 (601-639)||(8090319-8090357)
chr6 (603-633)||(15115339-15115369)
chr6 (602-636)||(21627712-21627746)
chr6 (601-639)||(30337447-30337485)
chr6 (603-636)||(12407508-12407541)
chr6 (601-638)||(12408564-12408601)
chr6 (602-639)||(17734195-17734232)
chr6 (603-639)||(26464591-26464627)
chr6 (603-639)||(30337810-30337846)
[»] chr3 (23 HSPs)
chr3 (601-639)||(23458371-23458409)
chr3 (601-639)||(40033848-40033886)
chr3 (601-639)||(40758502-40758540)
chr3 (606-639)||(26463635-26463668)
chr3 (602-639)||(33689381-33689418)
chr3 (603-639)||(9294350-9294386)
chr3 (597-633)||(26463984-26464020)
chr3 (603-639)||(40758147-40758183)
chr3 (601-639)||(2796177-2796215)
chr3 (601-639)||(33689771-33689809)
chr3 (601-639)||(41558006-41558044)
chr3 (601-639)||(42342789-42342827)
chr3 (598-639)||(3850519-3850560)
chr3 (602-639)||(19741284-19741321)
chr3 (606-639)||(21783403-21783436)
chr3 (604-633)||(35712045-35712074)
chr3 (606-639)||(36150530-36150563)
chr3 (604-633)||(41989584-41989613)
chr3 (606-639)||(42343123-42343156)
chr3 (605-633)||(9292245-9292273)
chr3 (603-639)||(34142610-34142646)
chr3 (603-639)||(36418080-36418116)
chr3 (605-633)||(43384681-43384709)
[»] scaffold0707 (1 HSPs)
scaffold0707 (602-639)||(6471-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (603-639)||(68965-69001)
scaffold0031 (603-633)||(69363-69393)
[»] scaffold0005 (1 HSPs)
scaffold0005 (602-633)||(37961-37992)
[»] scaffold0007 (2 HSPs)
scaffold0007 (601-639)||(1767-1805)
scaffold0007 (602-639)||(2133-2170)
[»] scaffold0075 (2 HSPs)
scaffold0075 (601-633)||(14427-14459)
scaffold0075 (603-639)||(14782-14818)


Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 275
Target Start/End: Original strand, 6517650 - 6517918
Alignment:
Q  7 aacaataattatggatgtttcaagctttaaaacgtgaacgagnnnnnnncattaaaaaataatttggccggctatatattcgtctgttgctagtttttaa 106  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6517650 aacaataattattgatgtttcaagctttaaaacgtgaacgagtttttttcattaaaaaataatttggccggctatatattcgtctgttgctagtttttaa 6517749  T
Q  107 aactatttgaaacaaaatttcactttcctttttatagaagaaactaacctttcttagatggagaaacatcatataattaatatgcaatttctcatttctc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6517750 aactatttgaaacaaaatttcactttcctttttatagaagaaactaacctttcttagatggagaaacatcatataattaatatgcaatttctcatttctc 6517849  T
Q  207 ccttaatatgttagttttgctgctagttttcttaggagnnnnnnnnttggtatacattaagtgtagatc 275  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  6517850 ccttaatatgttagttttgctgctagttttcttaggagaaaaaaaattggtatacattaagtgtagatc 6517918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 302 - 483
Target Start/End: Original strand, 6517945 - 6518126
Alignment:
Q  302 cgaactagagatttagtgatattcatcaactgtaannnnnnncttcaagccattatgtttaacaaggaactacattcatcagtcattgattccttaagta 401  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6517945 cgaactagagatttagtgatattcatcaactgtaatttttttcttcaagccattatgtttaacaaggaactacattcatcagtcattgattccttaagta 6518044  T
Q  402 ctccaatagagctttaagtatgttgaaatgtaattctaaacttgtatatgtttttgttttgtactatgttagttggttgtaa 483  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6518045 ctccaatagagctttaagtatgttgaaatctaattctaaacttgtatatgtttttgttttgtactatgttagttggttgtaa 6518126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 487 - 602
Target Start/End: Original strand, 5345483 - 5345598
Alignment:
Q  487 ctcctagtttctagcaagttagttagatacaaggctttacttgttttgcaagcaatatagaaaccaagttgtatatatacatgattcaatgtgaataaag 586  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||| |||||||||| ||||| |||||||||||||||| | |||||||||||||||||    
T  5345483 ctcctagtttctagcaagttagttagatctaaggcattacttgtttcgcaagcaatagagaaaacaagttgtatatatactttattcaatgtgaataaag 5345582  T
Q  587 tttatgcctcattcta 602  Q
      ||||||||||||||    
T  5345583 cctatgcctcattcta 5345598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 6513335 - 6513420
Alignment:
Q  56 cattaaaaaataatttggccggctatatattcgtctgttgctagtttttaaaactatttgaaacaaaatttcactttcctttttata 142  Q
    |||| ||||| |||||||||||||||| ||||| || ||||||| ||||||||||| || || ||||||||||||||| ||||||||    
T  6513335 cattgaaaaagaatttggccggctatagattcgactattgctagcttttaaaacta-ttcaaccaaaatttcactttcgtttttata 6513420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 6367991 - 6367954
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtc 6367954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 19515817 - 19515855
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtc 19515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 23209757 - 23209719
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtc 23209719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 30711757 - 30711719
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtc 30711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 36694280 - 36694318
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtc 36694318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 36710381 - 36710419
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtc 36710419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 43759252 - 43759214
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  43759252 taggcttaaatatgtatttcatccttgcaattaggggtc 43759214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 7820953 - 7820990
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtc 7820990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 17661851 - 17661888
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtc 17661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 601 - 638
Target Start/End: Complemental strand, 34464879 - 34464842
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggt 34464842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 40772888 - 40772851
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtc 40772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 46900029 - 46899992
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtc 46899992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 6367562 - 6367598
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtc 6367598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 638
Target Start/End: Original strand, 19017628 - 19017664
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggt 19017664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 24009575 - 24009611
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtc 24009611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 32917688 - 32917652
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtc 32917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 34464449 - 34464485
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtc 34464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 35152341 - 35152373
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaatta 35152373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 36694678 - 36694646
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaatta 36694646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 36710779 - 36710747
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaatta 36710747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 40772507 - 40772543
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtc 40772543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 6521385 - 6521354
Alignment:
Q  7 aacaataattatggatgtttcaagctttaaaa 38  Q
    ||||||||||||||||||||||||||||||||    
T  6521385 aacaataattatggatgtttcaagctttaaaa 6521354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 603 - 638
Target Start/End: Original strand, 30711327 - 30711362
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    ||||||||||||||||||||||||||||||| ||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggt 30711362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 639
Target Start/End: Complemental strand, 35152757 - 35152722
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||| |||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtc 35152722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Complemental strand, 48779548 - 48779517
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaatta 48779517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 5734008 - 5734046
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtc 5734046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 13914066 - 13914104
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtc 13914104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 632
Target Start/End: Complemental strand, 17662279 - 17662249
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatt 632  Q
    |||||||||||||||||||||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatt 17662249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 35473629 - 35473667
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtc 35473667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 37578190 - 37578228
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtc 37578228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 632
Target Start/End: Complemental strand, 37578621 - 37578591
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatt 632  Q
    |||||||||||||||||||||||||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaatt 37578591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 41098731 - 41098769
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtc 41098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 42533022 - 42533060
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtc 42533060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 1103890 - 1103853
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtc 1103853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 336
Target Start/End: Original strand, 6518149 - 6518178
Alignment:
Q  307 tagagatttagtgatattcatcaactgtaa 336  Q
    ||||||||||||||||||||||||||||||    
T  6518149 tagagatttagtgatattcatcaactgtaa 6518178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 633
Target Start/End: Complemental strand, 13914494 - 13914465
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaatta 13914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 17692610 - 17692577
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtc 17692577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 25647883 - 25647920
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtc 25647920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 40435348 - 40435381
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtc 40435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 634
Target Start/End: Complemental strand, 40439615 - 40439586
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaa 634  Q
    ||||||||||||||||||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaa 40439586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 6518224 - 6518188
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtc 6518188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 19018059 - 19018027
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||| |||||||||||||    
T  19018059 taggcttaaatatgtattttatccttgcaatta 19018027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 26024820 - 26024784
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtc 26024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 31197065 - 31197101
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||| |||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtc 31197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 34849011 - 34849047
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtc 34849047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 34850493 - 34850457
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtc 34850457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 633
Target Start/End: Original strand, 42248475 - 42248503
Alignment:
Q  605 cttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaatta 42248503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 46899061 - 46899097
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||| |||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtc 46899097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 585
Target Start/End: Original strand, 12832077 - 12832143
Alignment:
Q  516 caaggctttacttgttttgcaagcaatatagaaaccaagttgtatatatacatgattcaatgtgaataaa 585  Q
    |||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||| |||||||||||    
T  12832077 caaggctttacttgttttgcaagca--atagaaaacaagttgcatatatacatgattc-atgtgaataaa 12832143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 10334368 - 10334423
Alignment:
Q  517 aaggctttacttgttttgcaagcaatatagaaaccaagttgtatatatacatgattca 574  Q
    |||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||||    
T  10334368 aaggctttacttattttgcaagcaata--gaaaacaagttgtatatatacatgattca 10334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 28105499 - 28105537
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28105499 taggcttaaatatgtatttcatccttgcaattaagggtc 28105537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 639
Target Start/End: Original strand, 42019598 - 42019633
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtc 42019633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 5457337 - 5457299
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtc 5457299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 27397025 - 27396987
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtc 27396987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 28469438 - 28469400
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtc 28469400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 45011034 - 45010996
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtc 45010996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 24389214 - 24389177
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtc 24389177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 28469009 - 28469046
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtc 28469046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 638
Target Start/End: Complemental strand, 10936223 - 10936187
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||||||| ||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggt 10936187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 17886920 - 17886888
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaatta 17886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Complemental strand, 29141605 - 29141574
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaatta 29141574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 17102419 - 17102381
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtc 17102381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 24388821 - 24388855
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| |||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtc 24388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Complemental strand, 37657265 - 37657235
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaatta 37657235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Complemental strand, 40380112 - 40380082
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaatta 40380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Original strand, 42362450 - 42362480
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaatta 42362480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 42731849 - 42731811
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtc 42731811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 48788801 - 48788839
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtc 48788839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 2640177 - 2640214
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtc 2640214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 6253869 - 6253832
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtc 6253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 6571012 - 6571049
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtc 6571049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 17102019 - 17102056
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtc 17102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 22871706 - 22871669
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtc 22871669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 27991738 - 27991775
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtc 27991775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 32053142 - 32053179
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtc 32053179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 32298776 - 32298813
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtc 32298813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 10935794 - 10935830
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtc 10935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 18670291 - 18670255
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtc 18670255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 20426760 - 20426728
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||| ||||||||    
T  20426760 taggcttaaatatgtatttcatccctgcaatta 20426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 638
Target Start/End: Complemental strand, 42020022 - 42019990
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||| ||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggt 42019990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 42731419 - 42731455
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtc 42731455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 36186494 - 36186456
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtc 36186456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 16388581 - 16388619
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtc 16388619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 597 - 639
Target Start/End: Original strand, 23663539 - 23663581
Alignment:
Q  597 attctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  23663539 attctaggcttaaatatgcatttcatccttgcaattaggggtc 23663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 33357496 - 33357534
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtc 33357534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 603 - 637
Target Start/End: Original strand, 38862618 - 38862652
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaaggg 637  Q
    |||||||||||||||||||||||||||||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaaggg 38862652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 39072071 - 39072033
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtc 39072033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 4995085 - 4995048
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtc 4995048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 601 - 634
Target Start/End: Original strand, 34060487 - 34060520
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaa 634  Q
    ||||||||||||||||||||||||||||||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaa 34060520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 16388954 - 16388918
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtc 16388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 639
Target Start/End: Complemental strand, 23663946 - 23663906
Alignment:
Q  599 tctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23663946 tctaggcttaaatatgtatttgatccttgcaattaggggtc 23663906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 31608941 - 31608905
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtc 31608905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 39071676 - 39071712
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtc 39071712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 638
Target Start/End: Complemental strand, 40318393 - 40318357
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||||||| ||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggt 40318357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Original strand, 13186059 - 13186090
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaatta 13186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 12198948 - 12198986
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtc 12198986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 12443376 - 12443414
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtc 12443414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 13186489 - 13186451
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtc 13186451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 40317966 - 40318000
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| |||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtc 40318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Complemental strand, 42803646 - 42803616
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaatta 42803616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 8316652 - 8316689
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtc 8316689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 8317017 - 8316980
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtc 8316980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 20386859 - 20386822
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtc 20386822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 38862988 - 38862955
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtc 38862955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 4994655 - 4994687
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||| |||||||||    
T  4994655 taggcttaaatatgtatttcatcgttgcaatta 4994687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 602 - 638
Target Start/End: Complemental strand, 9065799 - 9065763
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  9065799 aggcttaaatatgtattccatccttgcaattaggggt 9065763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 20385568 - 20385604
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtc 20385604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 34176443 - 34176475
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||| ||||||||||||||||||||||||||||    
T  34176443 taggtttaaatatgtatttcatccttgcaatta 34176475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 38956100 - 38956064
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtc 38956064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 24411778 - 24411740
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtc 24411740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 39539348 - 39539310
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtc 39539310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 604 - 639
Target Start/End: Original strand, 15507674 - 15507709
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtc 15507709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 597 - 639
Target Start/End: Original strand, 24349668 - 24349710
Alignment:
Q  597 attctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  24349668 attctaggcttaaatatgtatttgatccttgcaattaggggtc 24349710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 34765378 - 34765416
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtc 34765416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 51692949 - 51692911
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtc 51692911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 46661343 - 46661306
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtc 46661306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 18831745 - 18831709
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtc 18831709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 639
Target Start/End: Complemental strand, 34765812 - 34765772
Alignment:
Q  599 tctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  34765812 tctaggcttaaatatgtattttatccttgcaattaggggtc 34765772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 638
Target Start/End: Complemental strand, 35028427 - 35028391
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||||||| ||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggt 35028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 51692551 - 51692583
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaatta 51692583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 52909683 - 52909651
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  52909683 taggcttaaatatgtatttcatccttgcaatta 52909651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Original strand, 14801735 - 14801766
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaatta 14801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Original strand, 17355924 - 17355955
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaatta 17355955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Original strand, 54713615 - 54713646
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  54713615 aggcttaaatatgtatttcatccttgcaatta 54713646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 148185 - 148147
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtc 148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 7451832 - 7451870
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtc 7451870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 10781914 - 10781876
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtc 10781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 13058035 - 13058073
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtc 13058073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 639
Target Start/End: Complemental strand, 15508098 - 15508064
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| |||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtc 15508064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 24711510 - 24711472
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtc 24711472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 35027996 - 35028034
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtc 35028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 599 - 633
Target Start/End: Complemental strand, 44967470 - 44967436
Alignment:
Q  599 tctaggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||| |||||||||||||    
T  44967470 tctaggcttaaatatgtatttgatccttgcaatta 44967436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 50418666 - 50418704
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtc 50418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 50419067 - 50419029
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtc 50419029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 10780712 - 10780749
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtc 10780749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 10974321 - 10974358
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtc 10974358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 23613308 - 23613345
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtc 23613345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 24350861 - 24350824
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtc 24350824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 24711110 - 24711147
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtc 24711147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 43155532 - 43155565
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||| |||||||||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtc 43155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 48528484 - 48528521
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtc 48528521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 631
Target Start/End: Complemental strand, 53129935 - 53129906
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaat 631  Q
    ||||||||||||||||||||||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaat 53129906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 54086698 - 54086731
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtc 54086731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 7452231 - 7452195
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtc 7452195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 23613706 - 23613670
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtc 23613670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 598 - 639
Target Start/End: Original strand, 20840528 - 20840569
Alignment:
Q  598 ttctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  20840528 ttctaggcttaaatatgtatttcatccttgcaattaggggtc 20840569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 5993887 - 5993925
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtc 5993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 6150850 - 6150812
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtc 6150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 14194421 - 14194459
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14194421 taggcttaaatatgtatttcatccttgcaattaggggtc 14194459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 602 - 636
Target Start/End: Complemental strand, 16083372 - 16083338
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagg 636  Q
    |||||||||||||||||||||||||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaagg 16083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 20814565 - 20814527
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtc 20814527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 35512146 - 35512184
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtc 35512184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 6150453 - 6150490
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtc 6150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 16157284 - 16157247
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtc 16157247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 18247505 - 18247468
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtc 18247468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 597 - 638
Target Start/End: Complemental strand, 19518041 - 19518000
Alignment:
Q  597 attctaggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  19518041 attctaagcttaaatatgtatttcatccttgcaattaggggt 19518000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 21265571 - 21265534
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtc 21265534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 601 - 638
Target Start/End: Original strand, 27937053 - 27937090
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27937053 taggcttaaatatgtatttcatccttgcaattaggggt 27937090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 39453728 - 39453691
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtc 39453691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 5024019 - 5024055
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtc 5024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 17202827 - 17202791
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtc 17202791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 638
Target Start/End: Complemental strand, 32242670 - 32242634
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||||||||| ||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggt 32242634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 634
Target Start/End: Complemental strand, 42265921 - 42265889
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaa 634  Q
    |||||||||||||||||||||||||||||||||    
T  42265921 aggcttaaatatgtatttcatccttgcaattaa 42265889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 639
Target Start/End: Original strand, 18247087 - 18247122
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||| |||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtc 18247122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 639
Target Start/End: Complemental strand, 35512545 - 35512506
Alignment:
Q  600 ctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  35512545 ctagacttaaatatgtatttcatccttgcaattaggggtc 35512506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 604 - 639
Target Start/End: Complemental strand, 38442494 - 38442459
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtc 38442459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 639
Target Start/End: Complemental strand, 38475430 - 38475391
Alignment:
Q  600 ctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  38475430 ctaggcttaaatatgcatttcatccttgcaattaggggtc 38475391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Complemental strand, 186847 - 186817
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaatta 186817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 19892310 - 19892344
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| |||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtc 19892344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 20840867 - 20840829
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtc 20840829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 28269420 - 28269458
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtc 28269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 28770867 - 28770905
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtc 28770905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 32242240 - 32242278
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtc 32242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 39453302 - 39453336
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| |||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtc 39453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 3528872 - 3528909
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtc 3528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 5024443 - 5024410
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtc 5024410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 11740690 - 11740723
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtc 11740723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 11761748 - 11761785
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtc 11761785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 11762146 - 11762109
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtc 11762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 18670201 - 18670238
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||| || |||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtc 18670238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 24547554 - 24547517
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtc 24547517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 27937424 - 27937391
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtc 27937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 42265734 - 42265771
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtc 42265771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 43159239 - 43159206
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtc 43159206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 3529270 - 3529234
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtc 3529234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 13362248 - 13362280
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||| ||||||||||||||||||||||||||||    
T  13362248 taggtttaaatatgtatttcatccttgcaatta 13362280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 633
Target Start/End: Complemental strand, 19892734 - 19892706
Alignment:
Q  605 cttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaatta 19892706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 20814134 - 20814166
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||| ||||||    
T  20814134 taggcttaaatatgtatttcatccttacaatta 20814166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 27587148 - 27587184
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtc 27587184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 27587543 - 27587507
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtc 27587507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 36382556 - 36382519
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtc 36382519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 37895346 - 37895383
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtc 37895383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 10713151 - 10713115
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtc 10713115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 639
Target Start/End: Complemental strand, 36480144 - 36480110
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtc 36480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 39423945 - 39423907
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtc 39423907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 3555249 - 3555286
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtc 3555286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 36755517 - 36755480
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtc 36755480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 600 - 639
Target Start/End: Complemental strand, 11163454 - 11163415
Alignment:
Q  600 ctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  11163454 ctaggcttaaatatgtatttgatccttgcaattaggggtc 11163415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 15848518 - 15848480
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtc 15848480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Original strand, 30729621 - 30729651
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaatta 30729651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 638
Target Start/End: Complemental strand, 34448226 - 34448188
Alignment:
Q  600 ctaggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  34448226 ctaggcttaaacatgtatttcatccttgcaattaggggt 34448188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 633
Target Start/End: Original strand, 2318160 - 2318189
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaatta 2318189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 2318939 - 2318902
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtc 2318902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 6588686 - 6588719
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtc 6588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 632
Target Start/End: Original strand, 6657874 - 6657907
Alignment:
Q  599 tctaggcttaaatatgtatttcatccttgcaatt 632  Q
    ||||||||||||||||||||| ||||||||||||    
T  6657874 tctaggcttaaatatgtatttgatccttgcaatt 6657907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 15848087 - 15848124
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtc 15848124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 16099453 - 16099416
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtc 16099416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 34447812 - 34447849
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtc 34447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 37895772 - 37895739
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtc 37895739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 36382159 - 36382191
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||| |||||||||||||||||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaatta 36382191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 39498709 - 39498677
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||| |||||||||||||    
T  39498709 taggcttaaatatgtatttgatccttgcaatta 39498677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 607 - 639
Target Start/End: Original strand, 44713799 - 44713831
Alignment:
Q  607 taaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||| |||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtc 44713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 3059255 - 3059293
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3059255 taggtttaaatatgtatttcatccttgcaattaagggtc 3059293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 11434804 - 11434838
Alignment:
Q  605 cttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtc 11434838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 30726189 - 30726151
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtc 30726151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 597 - 639
Target Start/End: Complemental strand, 30804295 - 30804253
Alignment:
Q  597 attctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  30804295 attctaggattaaatatgtatttcatccttgcaattaggggtc 30804253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 33647381 - 33647343
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  33647381 taggcttaaatatgtatttcatccttgcaattaggggtc 33647343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 679865 - 679902
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| |||||||||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtc 679902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 3059685 - 3059648
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtc 3059648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 21628142 - 21628105
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtc 21628105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 33517963 - 33517926
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtc 33517926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 633
Target Start/End: Complemental strand, 12081066 - 12081034
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||||    
T  12081066 taggcttaaatatgtatttcatccttgcaatta 12081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 681158 - 681120
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtc 681120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 8090357 - 8090319
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtc 8090319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Original strand, 15115339 - 15115369
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaatta 15115369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 636
Target Start/End: Original strand, 21627712 - 21627746
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagg 636  Q
    |||||||||||||||||||||||||| ||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaagg 21627746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 30337447 - 30337485
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtc 30337485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 603 - 636
Target Start/End: Original strand, 12407508 - 12407541
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagg 636  Q
    |||||||||||||||||||||||| |||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaagg 12407541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 601 - 638
Target Start/End: Complemental strand, 12408601 - 12408564
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggt 638  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggt 12408564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 17734195 - 17734232
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtc 17734232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 26464627 - 26464591
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||| |||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtc 26464591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 30337846 - 30337810
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtc 30337810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 23458409 - 23458371
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtc 23458371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 40033886 - 40033848
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtc 40033848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 40758540 - 40758502
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtc 40758502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 26463635 - 26463668
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtc 26463668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Original strand, 33689381 - 33689418
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtc 33689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 9294386 - 9294350
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtc 9294350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 633
Target Start/End: Complemental strand, 26464020 - 26463984
Alignment:
Q  597 attctaggcttaaatatgtatttcatccttgcaatta 633  Q
    |||| ||||||||||||||||||||||||||||||||    
T  26464020 attcaaggcttaaatatgtatttcatccttgcaatta 26463984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 40758147 - 40758183
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtc 40758183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 2796177 - 2796215
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtc 2796215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Complemental strand, 33689809 - 33689771
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtc 33689771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 41558006 - 41558044
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  41558006 taggcttaaatatgtatttcattcttgcaattatgggtc 41558044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 42342789 - 42342827
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtc 42342827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 639
Target Start/End: Complemental strand, 3850560 - 3850519
Alignment:
Q  598 ttctaggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||| |||||||||||||||||||||| |||||||| |||||    
T  3850560 ttcttggcttaaatatgtatttcatccctgcaattaggggtc 3850519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 19741321 - 19741284
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtc 19741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 21783403 - 21783436
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtc 21783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 633
Target Start/End: Original strand, 35712045 - 35712074
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaatta 35712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Original strand, 36150530 - 36150563
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||| |||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtc 36150563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 633
Target Start/End: Complemental strand, 41989613 - 41989584
Alignment:
Q  604 gcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaatta 41989584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 606 - 639
Target Start/End: Complemental strand, 42343156 - 42343123
Alignment:
Q  606 ttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||| |||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtc 42343123  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 633
Target Start/End: Original strand, 9292245 - 9292273
Alignment:
Q  605 cttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaatta 9292273  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 34142646 - 34142610
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtc 34142610  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 36418116 - 36418080
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtc 36418080  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 633
Target Start/End: Complemental strand, 43384709 - 43384681
Alignment:
Q  605 cttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||    
T  43384709 cttaaatatgtatttcatccttgcaatta 43384681  T

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Target: scaffold0707 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 6508 - 6471
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtc 6471  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 603 - 639
Target Start/End: Original strand, 68965 - 69001
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||||||||||||||| |||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtc 69001  T

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Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 633
Target Start/End: Complemental strand, 69393 - 69363
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaatta 633  Q
    |||||||||||||||||||||||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaatta 69363  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 602 - 633
Target Start/End: Complemental strand, 37992 - 37961
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaatta 37961  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 639
Target Start/End: Original strand, 1767 - 1805
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtc 1805  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 2170 - 2133
Alignment:
Q  602 aggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtc 2133  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 633
Target Start/End: Original strand, 14427 - 14459
Alignment:
Q  601 taggcttaaatatgtatttcatccttgcaatta 633  Q
    ||||||||||||||||||||||| |||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaatta 14459  T

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Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 603 - 639
Target Start/End: Complemental strand, 14818 - 14782
Alignment:
Q  603 ggcttaaatatgtatttcatccttgcaattaagggtc 639  Q
    |||||||||||| |||||||||||||||||| |||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtc 14782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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