View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4737-Insertion-18 (Length: 305)
Name: NF4737-Insertion-18
Description: NF4737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4737-Insertion-18 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 60 - 263
Target Start/End: Original strand, 31965581 - 31965784
Alignment:
| Q |
60 |
ctaccctagttgtatgtatattatcatttgtgactcatggatcatggcatcttgaacattgtacagtgggaggagggaggtatcagtgtatcattcaaaa |
159 |
Q |
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| T |
31965581 |
ctaccctagttgtatgtatattatcatttgtgactcatggatcatggcatcttgaacattgtacagtgggaggagggaggtatcagtgtatcattcaaaa |
31965680 |
T |
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| Q |
160 |
tggcatgttgctgcatcatgtgttaaggcattacataagagattcaagattgagcgccgttgatttttgtctatttattatggttgatgattgatacagt |
259 |
Q |
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| T |
31965681 |
tggcatgttgcttcatcatgtgttaaggcattacataagagattcaagattgagcgccgttgatttttgtctatttattatggttgatgattgatatagt |
31965780 |
T |
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| Q |
260 |
atac |
263 |
Q |
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|||| |
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| T |
31965781 |
atac |
31965784 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 31951295 - 31951466
Alignment:
| Q |
60 |
ctaccctagttgtatgtatattatcatttgtgactcatggatcatggcatcttgaacattgtacagtgggaggagggaggtatcagtgtatcattcaaaa |
159 |
Q |
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|||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||| |||| |||||||||| ||| |
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| T |
31951295 |
ctaccctagttgtatgtatattgtcatttgtgactcttggatcatggcaacttgaacaatgtacagtg---ggagggagggatcaatgtatcattctaaa |
31951391 |
T |
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| Q |
160 |
tggcatgttgctgcatcatgtgttaaggcattacataagagattcaagattgagcgccgttgatttttgtctattt |
235 |
Q |
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| T |
31951392 |
cagca-cttgcctcctcatgtgttaaggcataaaatgatagattcaagattgagcactgttgattcttgtctattt |
31951466 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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